TARDBP (TAR DNA binding protein) - Rat Genome Database

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Gene: TARDBP (TAR DNA binding protein) Homo sapiens
Analyze
Symbol: TARDBP
Name: TAR DNA binding protein
RGD ID: 1322081
HGNC Page HGNC:11571
Description: Enables several functions, including identical protein binding activity; molecular condensate scaffold activity; and nucleic acid binding activity. Involved in several processes, including amyloid fibril formation; negative regulation of macromolecule metabolic process; and regulation of mRNA stability. Located in nucleoplasm. Is active in intracellular non-membrane-bounded organelle. Implicated in Parkinson's disease; amyotrophic lateral sclerosis; amyotrophic lateral sclerosis type 10; and motor neuron disease. Biomarker of Lewy body dementia; Pick's disease; neurodegenerative disease (multiple); and progressive supranuclear palsy.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: ALS10; TAR DNA-binding protein 43; TAR DNA-binding protein-43; TDP-43
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: TARDBPP1   TARDBPP2   TARDBPP3  
Allele / Splice: See ClinVar data
Is Marker For: Strains:   SD-Tg(TRE-TARDBP-M337V)  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38111,012,654 - 11,030,528 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl111,012,344 - 11,030,528 (+)EnsemblGRCh38hg38GRCh38
GRCh37111,072,711 - 11,085,549 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36110,995,266 - 11,008,136 (+)NCBINCBI36Build 36hg18NCBI36
Build 34111,006,944 - 11,019,814NCBI
Celera110,184,976 - 10,197,861 (+)NCBICelera
Cytogenetic Map1p36.22NCBI
HuRef110,224,341 - 10,237,229 (+)NCBIHuRef
CHM1_1111,060,321 - 11,073,209 (+)NCBICHM1_1
T2T-CHM13v2.0110,553,914 - 10,571,805 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
17beta-hydroxy-17-methylestra-4,9,11-trien-3-one  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (EXP)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
3',5'-cyclic UMP  (EXP)
3,3',5,5'-tetrabromobisphenol A  (EXP)
5-aza-2'-deoxycytidine  (EXP)
6-propyl-2-thiouracil  (ISO)
7,12-dimethyltetraphene  (ISO)
aconitine  (ISO)
acrolein  (EXP)
alpha-pinene  (EXP)
amitrole  (ISO)
anthra[1,9-cd]pyrazol-6(2H)-one  (EXP)
antimony(0)  (EXP)
antirheumatic drug  (EXP)
aristolochic acid A  (EXP)
Aroclor 1254  (ISO)
arsenite(3-)  (EXP,ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (EXP)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (ISO)
Bisphenol B  (EXP)
bisphenol F  (EXP)
bufalin  (EXP)
butanal  (EXP)
cadmium dichloride  (ISO)
caffeine  (EXP)
carbon nanotube  (ISO)
carbonyl cyanide p-trifluoromethoxyphenylhydrazone  (EXP)
chloroprene  (ISO)
chloroquine  (EXP,ISO)
chromium(6+)  (ISO)
chrysene  (ISO)
cisplatin  (EXP,ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) chloride  (EXP)
cycloheximide  (EXP)
cyclosporin A  (EXP)
D-glucitol  (EXP)
decabromodiphenyl ether  (EXP)
diallyl trisulfide  (ISO)
dibutyl phthalate  (ISO)
diclofenac  (ISO)
digoxin  (EXP)
dioxygen  (EXP)
dipotassium bis[mu-tartrato(4-)]diantimonate(2-) trihydrate  (EXP)
disodium selenite  (EXP)
dorsomorphin  (EXP)
doxycycline  (EXP)
emetine  (ISO)
entinostat  (EXP)
enzyme inhibitor  (EXP)
epoxomicin  (EXP)
fenvalerate  (ISO)
flutamide  (ISO)
folic acid  (ISO)
gentamycin  (ISO)
geraniol  (EXP)
glafenine  (ISO)
hexachlorophene  (EXP)
hydrogen cyanide  (ISO)
hydroquinone  (EXP)
hydroquinone O-beta-D-glucopyranoside  (EXP)
irinotecan  (ISO)
ivermectin  (EXP)
L-serine  (ISO)
lanatoside C  (EXP)
lead(0)  (EXP,ISO)
leflunomide  (EXP)
lipopolysaccharide  (EXP)
mercury atom  (ISO)
mercury dichloride  (ISO)
mercury(0)  (ISO)
methimazole  (ISO)
methylmercury chloride  (EXP,ISO)
N-acetyl-L-cysteine  (EXP)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (EXP,ISO)
N-nitrosomorpholine  (ISO)
nefazodone  (ISO)
nickel dichloride  (EXP)
nimesulide  (ISO)
Nonylphenol  (ISO)
ochratoxin A  (EXP)
oxaliplatin  (ISO)
ozone  (EXP)
paracetamol  (ISO)
paraquat  (EXP)
pentanal  (EXP)
PF-670462  (EXP)
phenobarbital  (ISO)
phenol  (EXP)
phenylmercury acetate  (EXP)
pirinixic acid  (ISO)
potassium cyanide  (ISO)
progesterone  (EXP)
Proscillaridin  (EXP)
pyocyanine  (EXP)
SB 431542  (EXP)
silicon dioxide  (EXP,ISO)
sirolimus  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (EXP,ISO)
succimer  (ISO)
temozolomide  (EXP)
tetrachloromethane  (ISO)
thioacetamide  (ISO)
tin atom  (EXP)
tin(0)  (EXP)
topotecan  (ISO)
trichloroethene  (ISO)
trichostatin A  (EXP)
trimellitic anhydride  (ISO)
Triptolide  (EXP)
troglitazone  (ISO)
valproic acid  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
Abnormal lower motor neuron morphology  (IAGP)
Abnormal mitochondrial morphology  (IAGP)
Abnormal respiratory system physiology  (IAGP)
Abnormal upper motor neuron morphology  (IAGP)
Abnormality of extrapyramidal motor function  (IAGP)
Agitation  (IAGP)
Amyotrophic lateral sclerosis  (IAGP)
Anxiety  (IAGP)
Apathy  (IAGP)
Apraxia  (IAGP)
Atypical behavior  (IAGP)
Autosomal dominant inheritance  (IAGP)
Babinski sign  (IAGP)
Bilateral sensorineural hearing impairment  (IAGP)
Bulbar palsy  (IAGP)
Cachexia  (IAGP)
Cognitive impairment  (IAGP)
Degeneration of the lateral corticospinal tracts  (IAGP)
Depression  (IAGP)
Disinhibition  (IAGP)
Distal muscle weakness  (IAGP)
Dysarthria  (IAGP)
Dyscalculia  (IAGP)
Dysphagia  (IAGP)
Dyspnea  (IAGP)
Emotional lability  (IAGP)
Fasciculations  (IAGP)
Fatigable weakness of bulbar muscles  (IAGP)
Fatigable weakness of respiratory muscles  (IAGP)
Fatigable weakness of swallowing muscles  (IAGP)
Fatigue  (IAGP)
Foot dorsiflexor weakness  (IAGP)
Frontotemporal dementia  (IAGP)
Generalized amyotrophy  (IAGP)
Generalized muscle weakness  (IAGP)
Gliosis  (IAGP)
Global brain atrophy  (IAGP)
Hallucinations  (IAGP)
Hyperreflexia  (IAGP)
Hyporeflexia  (IAGP)
Jaw hyperreflexia  (IAGP)
Language impairment  (IAGP)
Laryngospasm  (IAGP)
Late onset  (IAGP)
Lower limb muscle weakness  (IAGP)
Motor neuron atrophy  (IAGP)
Motor stereotypy  (IAGP)
Muscle spasm  (IAGP)
Muscle weakness  (IAGP)
Mutism  (IAGP)
Nausea and vomiting  (IAGP)
Neurodegeneration  (IAGP)
Neuronal loss in the cerebral cortex  (IAGP)
Pain  (IAGP)
Paralysis  (IAGP)
Paraparesis  (IAGP)
Parkinsonism  (IAGP)
Perseverative thought  (IAGP)
Progressive cerebellar ataxia  (IAGP)
Progressive distal muscular atrophy  (IAGP)
Progressive spinal muscular atrophy  (IAGP)
Proximal muscle weakness  (IAGP)
Ptosis  (IAGP)
Rapidly progressive  (IAGP)
Respiratory failure  (IAGP)
Respiratory insufficiency due to muscle weakness  (IAGP)
Skeletal muscle atrophy  (IAGP)
Sleep abnormality  (IAGP)
Spasticity  (IAGP)
Supranuclear gaze palsy  (IAGP)
Tetraparesis  (IAGP)
Tongue atrophy  (IAGP)
Upper limb muscle weakness  (IAGP)
Weakness due to upper motor neuron dysfunction  (IAGP)
Xerostomia  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Age-dependent changes in TDP-43 levels in a mouse model of Alzheimer disease are linked to Abeta oligomers accumulation. Caccamo A, etal., Mol Neurodegener. 2010 Nov 11;5:51.
2. Frontotemporal lobar degeneration-related proteins induce only subtle memory-related deficits when bilaterally overexpressed in the dorsal hippocampus. Dayton RD, etal., Exp Neurol. 2011 Dec 9.
3. TAR-DNA binding protein 43 in Pick disease. Freeman SH, etal., J Neuropathol Exp Neurol. 2008 Jan;67(1):62-7.
4. TDP-43 A315T mutation in familial motor neuron disease. Gitcho MA, etal., Ann Neurol. 2008 Apr;63(4):535-8.
5. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
6. beta-Amyloid triggers ALS-associated TDP-43 pathology in AD models. Herman AM, etal., Brain Res. 2011 Apr 22;1386:191-9. Epub 2011 Mar 2.
7. Acute and chronically increased immunoreactivity to phosphorylation-independent but not pathological TDP-43 after a single traumatic brain injury in humans. Johnson VE, etal., Acta Neuropathol. 2011 Dec;122(6):715-26. Epub 2011 Nov 19.
8. TARDBP mutations in individuals with sporadic and familial amyotrophic lateral sclerosis. Kabashi E, etal., Nat Genet. 2008 May;40(5):572-4. Epub 2008 Mar 30.
9. Caspase-cleaved transactivation response DNA-binding protein 43 in Parkinson's disease and dementia with Lewy bodies. Kokoulina P and Rohn TT, Neurodegener Dis. 2010;7(4):243-50. Epub 2010 May 5.
10. TDP-43 proteinopathy and motor neuron disease in chronic traumatic encephalopathy. McKee AC, etal., J Neuropathol Exp Neurol. 2010 Sep;69(9):918-29.
11. Amyotrophic lateral sclerosis multiprotein biomarkers in peripheral blood mononuclear cells. Nardo G, etal., PLoS One. 2011;6(10):e25545. Epub 2011 Oct 5.
12. Ubiquitinated TDP-43 in frontotemporal lobar degeneration and amyotrophic lateral sclerosis. Neumann M, etal., Science. 2006 Oct 6;314(5796):130-3.
13. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
14. Clinical heterogeneity in Italian patients with amyotrophic lateral sclerosis. Piaceri I, etal., Clin Genet. 2011 Jun 8. doi: 10.1111/j.1399-0004.2011.01726.x.
15. Broadening the phenotype of TARDBP mutations: the TARDBP Ala382Thr mutation and Parkinson's disease in Sardinia. Quadri M, etal., Neurogenetics. 2011 Aug;12(3):203-9. Epub 2011 Jun 11.
16. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
17. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
18. RGD HPO Phenotype Annotation Pipeline RGD automated import pipeline for human HPO-to-gene-to-disease annotations
19. TDP-43 mutations in familial and sporadic amyotrophic lateral sclerosis. Sreedharan J, etal., Science. 2008 Mar 21;319(5870):1668-72. Epub 2008 Feb 28.
20. Pathological hallmarks of amyotrophic lateral sclerosis/frontotemporal lobar degeneration in transgenic mice produced with TDP-43 genomic fragments. Swarup V, etal., Brain. 2011 Sep;134(Pt 9):2610-26. Epub 2011 Jul 13.
21. Accumulation of transactive response DNA binding protein 43 in mild cognitive impairment and Alzheimer disease. Tremblay C, etal., J Neuropathol Exp Neurol. 2011 Sep;70(9):788-98.
22. Elevated expression of TDP-43 in the forebrain of mice is sufficient to cause neurological and pathological phenotypes mimicking FTLD-U. Tsai KJ, etal., J Exp Med. 2010 Aug 2;207(8):1661-73. Epub 2010 Jul 26.
23. Effect of topographical distribution of alpha-synuclein pathology on TDP-43 accumulation in Lewy body disease. Yokota O, etal., Acta Neuropathol. 2010 Dec;120(6):789-801. Epub 2010 Jul 29.
24. Phosphorylated TDP-43 pathology and hippocampal sclerosis in progressive supranuclear palsy. Yokota O, etal., Acta Neuropathol. 2010 Jul;120(1):55-66. Epub 2010 May 30.
Additional References at PubMed
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PMID:21206091   PMID:21209826   PMID:21220647   PMID:21243369   PMID:21257637   PMID:21339291   PMID:21355045   PMID:21358640   PMID:21403029   PMID:21412434   PMID:21418058   PMID:21421050  
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PMID:21753175   PMID:21783252   PMID:21830155   PMID:21832049   PMID:21873635   PMID:21881207   PMID:21899152   PMID:21903422   PMID:21933185   PMID:21943958   PMID:21946215   PMID:21956716  
PMID:21956718   PMID:22029574   PMID:22079093   PMID:22100394   PMID:22127299   PMID:22133803   PMID:22147697   PMID:22156203   PMID:22193716   PMID:22235134   PMID:22252998   PMID:22257502  
PMID:22268729   PMID:22292843   PMID:22323604   PMID:22327514   PMID:22363618   PMID:22398199   PMID:22405725   PMID:22406069   PMID:22414730   PMID:22424122   PMID:22446626   PMID:22456481  
PMID:22493728   PMID:22506890   PMID:22539017   PMID:22539580   PMID:22550220   PMID:22563080   PMID:22575358   PMID:22578468   PMID:22584570   PMID:22623428   PMID:22658674   PMID:22674379  
PMID:22674575   PMID:22681889   PMID:22691390   PMID:22693459   PMID:22718532   PMID:22732773   PMID:22751105   PMID:22751173   PMID:22752089   PMID:22764223   PMID:22797246   PMID:22804696  
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PMID:26581115   PMID:26598621   PMID:26605911   PMID:26614389   PMID:26618866   PMID:26638075   PMID:26639158   PMID:26672899   PMID:26674342   PMID:26702100   PMID:26723245   PMID:26735904  
PMID:26751167   PMID:26752685   PMID:26756435   PMID:26757674   PMID:26760575   PMID:26769969   PMID:26777405   PMID:26810591   PMID:26902425   PMID:26915990   PMID:26926802   PMID:26936937  
PMID:26971127   PMID:26979993   PMID:26980269   PMID:27015757   PMID:27025967   PMID:27030292   PMID:27040765   PMID:27056981   PMID:27123980   PMID:27151080   PMID:27155453   PMID:27193329  
PMID:27226551   PMID:27256400   PMID:27257061   PMID:27348499   PMID:27365398   PMID:27378374   PMID:27432186   PMID:27445147   PMID:27445339   PMID:27466192   PMID:27494151   PMID:27495267  
PMID:27503909   PMID:27518042   PMID:27545621   PMID:27591049   PMID:27604643   PMID:27615052   PMID:27621269   PMID:27634045   PMID:27684187   PMID:27693252   PMID:27757524   PMID:27786596  
PMID:27849576   PMID:27880917   PMID:27890430   PMID:27920024   PMID:27926873   PMID:28040728   PMID:28073925   PMID:28112502   PMID:28122516   PMID:28158562   PMID:28167528   PMID:28172957  
PMID:28186131   PMID:28257838   PMID:28281308   PMID:28300211   PMID:28301478   PMID:28302793   PMID:28330421   PMID:28332094   PMID:28334913   PMID:28335005   PMID:28343865   PMID:28357566  
PMID:28430587   PMID:28467211   PMID:28482850   PMID:28487370   PMID:28514442   PMID:28521037   PMID:28531192   PMID:28549443   PMID:28566288   PMID:28575377   PMID:28585542   PMID:28599005  
PMID:28663553   PMID:28686708   PMID:28711596   PMID:28724966   PMID:28733604   PMID:28789478   PMID:28793209   PMID:28794432   PMID:28833898   PMID:28833982   PMID:28848086   PMID:28859337  
PMID:28902428   PMID:28919059   PMID:28952053   PMID:28984110   PMID:28986522   PMID:28988034   PMID:29029362   PMID:29097807   PMID:29109149   PMID:29117863   PMID:29142232   PMID:29153328  
PMID:29229926   PMID:29233983   PMID:29308690   PMID:29395067   PMID:29409023   PMID:29438978   PMID:29467282   PMID:29478603   PMID:29507755   PMID:29511089   PMID:29511261   PMID:29511296  
PMID:29513014   PMID:29531287   PMID:29562314   PMID:29581274   PMID:29621978   PMID:29630989   PMID:29653597   PMID:29665116   PMID:29715546   PMID:29725819   PMID:29728564   PMID:29750243  
PMID:29779213   PMID:29786080   PMID:29787578   PMID:29788207   PMID:29801890   PMID:29802200   PMID:29804146   PMID:29844126   PMID:29884807   PMID:29886477   PMID:29912613   PMID:29955894  
PMID:29987190   PMID:30010126   PMID:30021884   PMID:30030424   PMID:30030753   PMID:30097533   PMID:30120199   PMID:30196744   PMID:30209976   PMID:30232004   PMID:30239641   PMID:30309612  
PMID:30310141   PMID:30349055   PMID:30355151   PMID:30357366   PMID:30404004   PMID:30404641   PMID:30413172   PMID:30450515   PMID:30453234   PMID:30458231   PMID:30463901   PMID:30464263  
PMID:30511086   PMID:30520303   PMID:30520513   PMID:30540446   PMID:30553531   PMID:30575818   PMID:30578840   PMID:30585729   PMID:30599136   PMID:30604226   PMID:30619736   PMID:30630951  
PMID:30742062   PMID:30742796   PMID:30759234   PMID:30770445   PMID:30773093   PMID:30785719   PMID:30804502   PMID:30810811   PMID:30814253   PMID:30824544   PMID:30853299   PMID:30905713  
PMID:30922392   PMID:30948266   PMID:31005259   PMID:31019288   PMID:31035038   PMID:31036551   PMID:31039256   PMID:31042469   PMID:31067307   PMID:31091453   PMID:31100073   PMID:31132467  
PMID:31180492   PMID:31186504   PMID:31235914   PMID:31242080   PMID:31287959   PMID:31332168   PMID:31355778   PMID:31357627   PMID:31382054   PMID:31430111   PMID:31515300   PMID:31527135  
PMID:31562527   PMID:31577344   PMID:31586073   PMID:31619481   PMID:31626287   PMID:31642482   PMID:31653829   PMID:31655156   PMID:31661037   PMID:31663379   PMID:31693373   PMID:31703746  
PMID:31705957   PMID:31714900   PMID:31728929   PMID:31759630   PMID:31767634   PMID:31780563   PMID:31801077   PMID:31852254   PMID:31863590   PMID:31871319   PMID:31898895   PMID:31914861  
PMID:31929165   PMID:31951008   PMID:31953403   PMID:31980649   PMID:32007267   PMID:32081878   PMID:32129710   PMID:32132204   PMID:32142134   PMID:32157757   PMID:32203420   PMID:32253937  
PMID:32301481   PMID:32330447   PMID:32337711   PMID:32343854   PMID:32369233   PMID:32393629   PMID:32408057   PMID:32416067   PMID:32422502   PMID:32422969   PMID:32457219   PMID:32521226  
PMID:32529876   PMID:32558493   PMID:32572027   PMID:32649883   PMID:32657153   PMID:32665550   PMID:32686835   PMID:32687490   PMID:32731393   PMID:32758633   PMID:32759188   PMID:32790644  
PMID:32800996   PMID:32807901   PMID:32814053   PMID:32814769   PMID:32835772   PMID:32865115   PMID:32872449   PMID:32882370   PMID:32905556   PMID:32907630   PMID:32913111   PMID:32929329  
PMID:32963011   PMID:32992901   PMID:33003404   PMID:33022573   PMID:33026249   PMID:33031745   PMID:33064315   PMID:33065281   PMID:33068411   PMID:33097688   PMID:33137311   PMID:33144500  
PMID:33149110   PMID:33151007   PMID:33155043   PMID:33159016   PMID:33230138   PMID:33269497   PMID:33277362   PMID:33300249   PMID:33301444   PMID:33306668   PMID:33335017   PMID:33337372  
PMID:33361387   PMID:33386850   PMID:33391478   PMID:33398173   PMID:33421065   PMID:33433877   PMID:33433879   PMID:33441818   PMID:33452055   PMID:33454579   PMID:33461623   PMID:33479441  
PMID:33545068   PMID:33577819   PMID:33579840   PMID:33588953   PMID:33622418   PMID:33624322   PMID:33644029   PMID:33692125   PMID:33712624   PMID:33729478   PMID:33744316   PMID:33766124  
PMID:33771571   PMID:33803845   PMID:33832769   PMID:33852834   PMID:33855783   PMID:33888768   PMID:33908654   PMID:33909608   PMID:33916271   PMID:33924373   PMID:33945510   PMID:33961781  
PMID:33963840   PMID:33969528   PMID:33971027   PMID:34002018   PMID:34031922   PMID:34048071   PMID:34079125   PMID:34082062   PMID:34107054   PMID:34109652   PMID:34112944   PMID:34131277  
PMID:34199367   PMID:34244482   PMID:34244791   PMID:34271284   PMID:34290285   PMID:34333853   PMID:34339840   PMID:34347016   PMID:34363810   PMID:34371283   PMID:34373451   PMID:34378050  
PMID:34380047   PMID:34390468   PMID:34404558   PMID:34404845   PMID:34428256   PMID:34445680   PMID:34469713   PMID:34548609   PMID:34551306   PMID:34558120   PMID:34650049   PMID:34709727  
PMID:34723963   PMID:34728620   PMID:34732716   PMID:34767673   PMID:34769284   PMID:34795231   PMID:34824257   PMID:34843548   PMID:34880495   PMID:34913181   PMID:34930382   PMID:34944548  
PMID:34966974   PMID:35007165   PMID:35013218   PMID:35044790   PMID:35053327   PMID:35076694   PMID:35112738   PMID:35140242   PMID:35168140   PMID:35182466   PMID:35197626   PMID:35197628  
PMID:35227277   PMID:35229461   PMID:35231559   PMID:35239007   PMID:35256949   PMID:35264561   PMID:35271311   PMID:35294549   PMID:35314728   PMID:35320398   PMID:35344984   PMID:35379950  
PMID:35438230   PMID:35439318   PMID:35446349   PMID:35490297   PMID:35504883   PMID:35509820   PMID:35511239   PMID:35513543   PMID:35542047   PMID:35546148   PMID:35551470   PMID:35563538  
PMID:35568729   PMID:35604654   PMID:35641224   PMID:35644946   PMID:35696592   PMID:35701899   PMID:35708789   PMID:35751132   PMID:35758309   PMID:35771920   PMID:35778567   PMID:35785414  
PMID:35787294   PMID:35793404   PMID:35807552   PMID:35819319   PMID:35831314   PMID:35835219   PMID:35844135   PMID:35850772   PMID:35871544   PMID:35879741   PMID:35932023   PMID:35944360  
PMID:35954242   PMID:35973513   PMID:35974122   PMID:36007056   PMID:36038081   PMID:36053560   PMID:36057605   PMID:36075972   PMID:36077049   PMID:36114006   PMID:36180527   PMID:36215168  
PMID:36244648   PMID:36264254   PMID:36282215   PMID:36293362   PMID:36298819   PMID:36369320   PMID:36373674   PMID:36424410   PMID:36430231   PMID:36442745   PMID:36456471   PMID:36463537  
PMID:36517590   PMID:36526897   PMID:36527420   PMID:36552734   PMID:36634675   PMID:36634849   PMID:36641675   PMID:36675095   PMID:36709343   PMID:36732882   PMID:36779763   PMID:36812677  
PMID:36823441   PMID:36898615   PMID:36929488   PMID:36930291   PMID:36963381   PMID:37000196   PMID:37012364   PMID:37037195   PMID:37039659   PMID:37046025   PMID:37046309   PMID:37075107  
PMID:37080969   PMID:37118836   PMID:37120454   PMID:37131250   PMID:37147573   PMID:37218402   PMID:37218694   PMID:37259156   PMID:37386798   PMID:37431963   PMID:37450246   PMID:37460529  
PMID:37496071   PMID:37527763   PMID:37532939   PMID:37540751   PMID:37569549   PMID:37592884   PMID:37605276   PMID:37608120   PMID:37616343   PMID:37647804   PMID:37669322   PMID:37739033  
PMID:37741764   PMID:37762112   PMID:37793650   PMID:37813308   PMID:37827155   PMID:37855870   PMID:37914747   PMID:37951930   PMID:38002982   PMID:38113892   PMID:38139294   PMID:38172120  
PMID:38175301   PMID:38178578   PMID:38183652   PMID:38232138   PMID:38252412   PMID:38261982   PMID:38266517   PMID:38277467   PMID:38280479   PMID:38290242   PMID:38347588   PMID:38367882  
PMID:38374041   PMID:38395965   PMID:38422113   PMID:38568058  


Genomics

Comparative Map Data
TARDBP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38111,012,654 - 11,030,528 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl111,012,344 - 11,030,528 (+)EnsemblGRCh38hg38GRCh38
GRCh37111,072,711 - 11,085,549 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36110,995,266 - 11,008,136 (+)NCBINCBI36Build 36hg18NCBI36
Build 34111,006,944 - 11,019,814NCBI
Celera110,184,976 - 10,197,861 (+)NCBICelera
Cytogenetic Map1p36.22NCBI
HuRef110,224,341 - 10,237,229 (+)NCBIHuRef
CHM1_1111,060,321 - 11,073,209 (+)NCBICHM1_1
T2T-CHM13v2.0110,553,914 - 10,571,805 (+)NCBIT2T-CHM13v2.0
Tardbp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394148,696,839 - 148,711,672 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4148,696,839 - 148,711,476 (-)EnsemblGRCm39 Ensembl
GRCm384148,612,382 - 148,627,084 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4148,612,382 - 148,627,019 (-)EnsemblGRCm38mm10GRCm38
MGSCv374147,986,491 - 148,001,105 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364147,454,416 - 147,470,796 (-)NCBIMGSCv36mm8
Celera4150,873,662 - 150,888,313 (-)NCBICelera
Cytogenetic Map4E2NCBI
cM Map478.77NCBI
Tardbp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85164,330,452 - 164,348,435 (-)NCBIGRCr8
mRatBN7.25159,050,518 - 159,062,218 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5159,051,799 - 159,062,055 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5161,768,493 - 161,778,784 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05163,590,953 - 163,601,242 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05163,547,298 - 163,557,588 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05165,432,089 - 165,442,232 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5165,432,095 - 165,442,048 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05169,088,684 - 169,099,216 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45165,698,665 - 165,709,531 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15165,708,851 - 165,719,708 (-)NCBI
Celera5157,327,910 - 157,337,955 (-)NCBICelera
Cytogenetic Map5q36NCBI
Tardbp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554862,656,121 - 2,674,807 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554862,656,121 - 2,674,808 (-)NCBIChiLan1.0ChiLan1.0
TARDBP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21217,200,843 - 217,212,563 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11215,840,309 - 215,858,530 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v019,775,084 - 9,786,710 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1110,996,006 - 11,008,732 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl110,996,006 - 11,008,732 (+)Ensemblpanpan1.1panPan2
TARDBP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1284,987,752 - 84,998,136 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl284,989,952 - 84,998,593 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha281,515,040 - 81,527,435 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0285,647,107 - 85,659,313 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl285,649,924 - 85,659,763 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1282,395,167 - 82,407,547 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0283,396,611 - 83,408,986 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0284,459,460 - 84,471,855 (-)NCBIUU_Cfam_GSD_1.0
Tardbp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505834,266,198 - 34,278,928 (+)NCBIHiC_Itri_2
SpeTri2.0NW_00493647490,813 - 103,713 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TARDBP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl671,213,860 - 71,227,704 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1671,213,584 - 71,227,707 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2665,135,826 - 65,147,430 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TARDBP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120120,753,764 - 120,765,259 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605424,661,891 - 24,675,297 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tardbp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248181,759,497 - 1,789,813 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248181,759,496 - 1,789,806 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in TARDBP
266 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NM_007375.4(TARDBP):c.1121dup (p.Tyr374Ter) duplication Amyotrophic lateral sclerosis type 10 [RCV000020660]|TARDBP-related condition [RCV003415726] Chr1:11022529..11022530 [GRCh38]
Chr1:11082586..11082587 [GRCh37]
Chr1:1p36.22
pathogenic|uncertain significance|not provided
NM_007375.4(TARDBP):c.1009A>G (p.Met337Val) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000005539]|Amyotrophic lateral sclerosis type 10 [RCV000693006]|not provided [RCV001090806] Chr1:11022418 [GRCh38]
Chr1:11082475 [GRCh37]
Chr1:1p36.22
pathogenic
NM_007375.4(TARDBP):c.991C>A (p.Gln331Lys) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000005540] Chr1:11022400 [GRCh38]
Chr1:11082457 [GRCh37]
Chr1:1p36.22
pathogenic
NM_007375.4(TARDBP):c.881G>C (p.Gly294Ala) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000005541]|Inborn genetic diseases [RCV002371764] Chr1:11022290 [GRCh38]
Chr1:11082347 [GRCh37]
Chr1:1p36.22
pathogenic|uncertain significance
NM_007375.4(TARDBP):c.869G>C (p.Gly290Ala) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000005542]|Amyotrophic lateral sclerosis type 10 [RCV001054737] Chr1:11022278 [GRCh38]
Chr1:11082335 [GRCh37]
Chr1:1p36.22
pathogenic|uncertain significance
NM_007375.4(TARDBP):c.892G>A (p.Gly298Ser) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000005543]|Amyotrophic lateral sclerosis type 10 [RCV001851670]|not provided [RCV000713825] Chr1:11022301 [GRCh38]
Chr1:11082358 [GRCh37]
Chr1:1p36.22
pathogenic|likely pathogenic
NM_007375.4(TARDBP):c.506A>G (p.Asp169Gly) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000005544] Chr1:11018836 [GRCh38]
Chr1:11078893 [GRCh37]
Chr1:1p36.22
pathogenic|conflicting interpretations of pathogenicity
NM_007375.4(TARDBP):c.1042G>T (p.Gly348Cys) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000005545]|Amyotrophic lateral sclerosis type 10 [RCV001851671]|not provided [RCV000516886] Chr1:11022451 [GRCh38]
Chr1:11082508 [GRCh37]
Chr1:1p36.22
pathogenic|likely pathogenic
NM_007375.4(TARDBP):c.1028A>G (p.Gln343Arg) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000005546] Chr1:11022437 [GRCh38]
Chr1:11082494 [GRCh37]
Chr1:1p36.22
pathogenic
NM_007375.4(TARDBP):c.943G>A (p.Ala315Thr) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000005547]|Amyotrophic lateral sclerosis type 10 [RCV001384596] Chr1:11022352 [GRCh38]
Chr1:11082409 [GRCh37]
Chr1:1p36.22
pathogenic
NM_007375.4(TARDBP):c.787A>G (p.Lys263Glu) single nucleotide variant FRONTOTEMPORAL DEMENTIA WITH TDP43 INCLUSIONS, TARDBP-RELATED [RCV000005549] Chr1:11022196 [GRCh38]
Chr1:11082253 [GRCh37]
Chr1:1p36.22
pathogenic
NM_007375.4(TARDBP):c.*697G>A single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000005550]|Amyotrophic lateral sclerosis type 10 [RCV002512811]|FRONTOTEMPORAL DEMENTIA WITH TDP43 INCLUSIONS, TARDBP-RELATED [RCV000005551] Chr1:11023351 [GRCh38]
Chr1:11083408 [GRCh37]
Chr1:1p36.22
pathogenic|uncertain significance
NM_007375.4(TARDBP):c.*83T>C single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000020654] Chr1:11022737 [GRCh38]
Chr1:11082794 [GRCh37]
Chr1:1p36.22
pathogenic|not provided
NM_007375.3(TARDBP):c.1004G>A (p.Gly335Asp) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000020655] Chr1:11022413 [GRCh38]
Chr1:11082470 [GRCh37]
Chr1:1p36.22
pathogenic
NM_007375.4(TARDBP):c.1035C>A (p.Asn345Lys) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000703167] Chr1:11022444 [GRCh38]
Chr1:11082501 [GRCh37]
Chr1:1p36.22
pathogenic|uncertain significance
NM_007375.4(TARDBP):c.1055A>G (p.Asn352Ser) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000020657]|Amyotrophic lateral sclerosis type 10 [RCV001851975]|not provided [RCV000993301] Chr1:11022464 [GRCh38]
Chr1:11082521 [GRCh37]
Chr1:1p36.22
pathogenic|likely pathogenic|not provided
NM_007375.3(TARDBP):c.1083G>T (p.Arg361Ser) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000020658] Chr1:11022492 [GRCh38]
Chr1:11082549 [GRCh37]
Chr1:1p36.22
pathogenic
NM_007375.3(TARDBP):c.1097C>G (p.Ala366Gly) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000020659] Chr1:11022506 [GRCh38]
Chr1:11082563 [GRCh37]
Chr1:1p36.22
pathogenic
NM_007375.3(TARDBP):c.1135T>C (p.Ser379Pro) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000020661] Chr1:11022544 [GRCh38]
Chr1:11082601 [GRCh37]
Chr1:1p36.22
pathogenic
NM_007375.3(TARDBP):c.1136C>G (p.Ser379Cys) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000020662] Chr1:11022545 [GRCh38]
Chr1:11082602 [GRCh37]
Chr1:1p36.22
pathogenic
NM_007375.4(TARDBP):c.1144G>A (p.Ala382Thr) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000020663]|Amyotrophic lateral sclerosis type 10 [RCV002513146]|FRONTOTEMPORAL DEMENTIA WITH TDP43 INCLUSIONS, TARDBP-RELATED [RCV000106321]|TARDBP-related condition [RCV003944833]|not provided [RCV000413910] Chr1:11022553 [GRCh38]
Chr1:11082610 [GRCh37]
Chr1:1p36.22
pathogenic|likely pathogenic
NM_007375.3(TARDBP):c.1144G>C (p.Ala382Pro) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000020664] Chr1:11022553 [GRCh38]
Chr1:11082610 [GRCh37]
Chr1:1p36.22
pathogenic
NM_007375.4(TARDBP):c.1147A>G (p.Ile383Val) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000995885]|Amyotrophic lateral sclerosis type 10 [RCV001851976]|See cases [RCV002251918]|not provided [RCV001579671] Chr1:11022556 [GRCh38]
Chr1:11082613 [GRCh37]
Chr1:1p36.22
pathogenic|likely pathogenic
NM_007375.4(TARDBP):c.1168A>G (p.Asn390Asp) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003764614]|TARDBP-related condition [RCV003407351]|not provided [RCV001570554] Chr1:11022577 [GRCh38]
Chr1:11082634 [GRCh37]
Chr1:1p36.22
pathogenic|uncertain significance
NM_007375.4(TARDBP):c.1169A>G (p.Asn390Ser) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001861034]|Inborn genetic diseases [RCV002329720]|not provided [RCV001732914] Chr1:11022578 [GRCh38]
Chr1:11082635 [GRCh37]
Chr1:1p36.22
pathogenic|likely benign|uncertain significance
NM_007375.4(TARDBP):c.1178C>T (p.Ser393Leu) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002648124] Chr1:11022587 [GRCh38]
Chr1:11082644 [GRCh37]
Chr1:1p36.22
pathogenic|uncertain significance
NM_007375.3(TARDBP):c.195T>A (p.Asp65Glu) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000020669] Chr1:11013922 [GRCh38]
Chr1:11073979 [GRCh37]
Chr1:1p36.22
benign
NM_007375.4(TARDBP):c.269C>T (p.Ala90Val) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000020670]|Amyotrophic lateral sclerosis type 10 [RCV000821536]|Inborn genetic diseases [RCV002426513]|TARDBP-related condition [RCV003924849]|not provided [RCV001311624] Chr1:11016874 [GRCh38]
Chr1:11076931 [GRCh37]
Chr1:1p36.22
benign|likely benign|uncertain significance
NM_007375.4(TARDBP):c.800A>G (p.Asn267Ser) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000020671]|Amyotrophic lateral sclerosis type 10 [RCV001851977]|Frontotemporal lobar degeneration, TARDBP-related [RCV002051795]|Inborn genetic diseases [RCV003242964]|TARDBP-related condition [RCV003904854] Chr1:11022209 [GRCh38]
Chr1:11082266 [GRCh37]
Chr1:1p36.22
pathogenic|likely pathogenic|uncertain significance|not provided
NM_007375.4(TARDBP):c.859G>A (p.Gly287Ser) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000020672]|Amyotrophic lateral sclerosis type 10 [RCV000529539]|Motor neuron disease [RCV000492328]|not provided [RCV000412864] Chr1:11022268 [GRCh38]
Chr1:11082325 [GRCh37]
Chr1:1p36.22
pathogenic|likely pathogenic|uncertain significance
NM_007375.4(TARDBP):c.881G>T (p.Gly294Val) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000020673]|Amyotrophic lateral sclerosis type 10 [RCV001390939]|not provided [RCV002472934] Chr1:11022290 [GRCh38]
Chr1:11082347 [GRCh37]
Chr1:1p36.22
pathogenic|not provided
NM_007375.4(TARDBP):c.883G>A (p.Gly295Ser) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000020674]|Amyotrophic lateral sclerosis type 10 [RCV003764615] Chr1:11022292 [GRCh38]
Chr1:11082349 [GRCh37]
Chr1:1p36.22
pathogenic
NM_007375.4(TARDBP):c.883G>C (p.Gly295Arg) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002569399]|not provided [RCV002474373] Chr1:11022292 [GRCh38]
Chr1:11082349 [GRCh37]
Chr1:1p36.22
pathogenic|uncertain significance
NM_007375.4(TARDBP):c.931A>G (p.Met311Val) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000694078]|Amyotrophic lateral sclerosis type 10 [RCV003334377]|not provided [RCV003311663] Chr1:11022340 [GRCh38]
Chr1:11082397 [GRCh37]
Chr1:1p36.22
pathogenic|likely pathogenic|uncertain significance
NM_007375.4(TARDBP):c.995G>A (p.Ser332Asn) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001997114] Chr1:11022404 [GRCh38]
Chr1:11082461 [GRCh37]
Chr1:1p36.22
pathogenic|uncertain significance
NM_007375.3(TARDBP):c.859G>C (p.Gly287Arg) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000032100] Chr1:11022268 [GRCh38]
Chr1:11082325 [GRCh37]
Chr1:1p36.22
pathogenic
GRCh38/hg38 1p36.22(chr1:10637036-11293430)x3 copy number gain See cases [RCV000051459] Chr1:10637036..11293430 [GRCh38]
Chr1:10697093..11353487 [GRCh37]
Chr1:10619680..11276074 [NCBI36]
Chr1:1p36.22
uncertain significance
GRCh38/hg38 1p36.31-36.21(chr1:6652339-12724844)x3 copy number gain See cases [RCV000051794] Chr1:6652339..12724844 [GRCh38]
Chr1:6712399..12784811 [GRCh37]
Chr1:6634986..12707398 [NCBI36]
Chr1:1p36.31-36.21
pathogenic
GRCh38/hg38 1p36.31-36.13(chr1:6853513-17326813)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051795]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051795]|See cases [RCV000051795] Chr1:6853513..17326813 [GRCh38]
Chr1:6913573..17685411 [GRCh37]
Chr1:6836160..17557998 [NCBI36]
Chr1:1p36.31-36.13
pathogenic
GRCh38/hg38 1p36.32-36.21(chr1:2963330-12666744)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053713]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053713]|See cases [RCV000053713] Chr1:2963330..12666744 [GRCh38]
Chr1:2879895..12726755 [GRCh37]
Chr1:2869755..12649342 [NCBI36]
Chr1:1p36.32-36.21
pathogenic
GRCh38/hg38 1p36.32-36.13(chr1:3006193-17688934)x1 copy number loss See cases [RCV000053714] Chr1:3006193..17688934 [GRCh38]
Chr1:2922757..18015429 [GRCh37]
Chr1:2912617..17888016 [NCBI36]
Chr1:1p36.32-36.13
pathogenic
GRCh38/hg38 1p36.32-36.22(chr1:3319336-11243395)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053716]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053716]|See cases [RCV000053716] Chr1:3319336..11243395 [GRCh38]
Chr1:3235900..11303452 [GRCh37]
Chr1:3225760..11226039 [NCBI36]
Chr1:1p36.32-36.22
pathogenic
GRCh38/hg38 1p36.32-36.21(chr1:4898439-13111056)x1 copy number loss See cases [RCV000053724] Chr1:4898439..13111056 [GRCh38]
Chr1:4958499..13178528 [GRCh37]
Chr1:4858359..13101115 [NCBI36]
Chr1:1p36.32-36.21
pathogenic
GRCh38/hg38 1p36.22-36.12(chr1:10556797-22557907)x1 copy number loss See cases [RCV000053760] Chr1:10556797..22557907 [GRCh38]
Chr1:10616854..22884400 [GRCh37]
Chr1:10539441..22756987 [NCBI36]
Chr1:1p36.22-36.12
pathogenic
GRCh38/hg38 1p36.22-36.13(chr1:10621776-16520709)x1 copy number loss See cases [RCV000053763] Chr1:10621776..16520709 [GRCh38]
Chr1:10681833..16847204 [GRCh37]
Chr1:10604420..16719791 [NCBI36]
Chr1:1p36.22-36.13
pathogenic
GRCh38/hg38 1p36.22-36.13(chr1:10809039-16422500)x1 copy number loss See cases [RCV000053765] Chr1:10809039..16422500 [GRCh38]
Chr1:10869096..16748995 [GRCh37]
Chr1:10791683..16621582 [NCBI36]
Chr1:1p36.22-36.13
pathogenic
GRCh38/hg38 1p36.23-36.21(chr1:7165036-13111056)x1 copy number loss See cases [RCV000053755] Chr1:7165036..13111056 [GRCh38]
Chr1:7225096..13178528 [GRCh37]
Chr1:7147683..13101115 [NCBI36]
Chr1:1p36.23-36.21
pathogenic
GRCh38/hg38 1p36.23-36.13(chr1:9034671-16441465)x1 copy number loss See cases [RCV000053756] Chr1:9034671..16441465 [GRCh38]
Chr1:9094730..16767960 [GRCh37]
Chr1:9017317..16640547 [NCBI36]
Chr1:1p36.23-36.13
pathogenic
GRCh38/hg38 1p36.22-36.21(chr1:9406722-12852772)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053757]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053757]|See cases [RCV000053757] Chr1:9406722..12852772 [GRCh38]
Chr1:9466781..12912625 [GRCh37]
Chr1:9389368..12835212 [NCBI36]
Chr1:1p36.22-36.21
pathogenic
GRCh38/hg38 1p36.22(chr1:10203955-12060262)x1 copy number loss See cases [RCV000053758] Chr1:10203955..12060262 [GRCh38]
Chr1:10264013..12120319 [GRCh37]
Chr1:10186600..12042906 [NCBI36]
Chr1:1p36.22
pathogenic
NM_007375.3(TARDBP):c.959C>T (p.Pro320Leu) single nucleotide variant Malignant melanoma [RCV000064005] Chr1:11022368 [GRCh38]
Chr1:11082425 [GRCh37]
Chr1:11005012 [NCBI36]
Chr1:1p36.22
not provided
NM_006610.3(MASP2):c.1645A>T (p.Thr549Ser) single nucleotide variant Malignant melanoma [RCV000059831] Chr1:11027301 [GRCh38]
Chr1:11087358 [GRCh37]
Chr1:11009945 [NCBI36]
Chr1:1p36.22
not provided
GRCh38/hg38 1p36.23-36.21(chr1:9064492-12666744)x1 copy number loss See cases [RCV000133779] Chr1:9064492..12666744 [GRCh38]
Chr1:9124551..12726755 [GRCh37]
Chr1:9047138..12649342 [NCBI36]
Chr1:1p36.23-36.21
pathogenic
GRCh38/hg38 1p36.23-36.22(chr1:8283694-12470133)x1 copy number loss See cases [RCV000135807] Chr1:8283694..12470133 [GRCh38]
Chr1:8343754..12530188 [GRCh37]
Chr1:8266341..12452775 [NCBI36]
Chr1:1p36.23-36.22
pathogenic
GRCh38/hg38 1p36.33-36.22(chr1:844347-12470133)x1 copy number loss See cases [RCV000136695] Chr1:844347..12470133 [GRCh38]
Chr1:779727..12530188 [GRCh37]
Chr1:769590..12452775 [NCBI36]
Chr1:1p36.33-36.22
pathogenic|likely pathogenic
GRCh38/hg38 1p36.32-36.21(chr1:4898439-12911913)x1 copy number loss See cases [RCV000137461] Chr1:4898439..12911913 [GRCh38]
Chr1:4958499..12971757 [GRCh37]
Chr1:4858359..12894344 [NCBI36]
Chr1:1p36.32-36.21
pathogenic
GRCh38/hg38 1p36.31-36.21(chr1:6303641-15799093)x1 copy number loss See cases [RCV000137948] Chr1:6303641..15799093 [GRCh38]
Chr1:6363701..16125588 [GRCh37]
Chr1:6286288..15998175 [NCBI36]
Chr1:1p36.31-36.21
pathogenic|likely benign
GRCh38/hg38 1p36.22-36.21(chr1:9428538-15815791)x1 copy number loss See cases [RCV000140873] Chr1:9428538..15815791 [GRCh38]
Chr1:9488597..16142286 [GRCh37]
Chr1:9411184..16014873 [NCBI36]
Chr1:1p36.22-36.21
pathogenic
GRCh38/hg38 1p36.22(chr1:10317912-11018880)x4 copy number gain See cases [RCV000141822] Chr1:10317912..11018880 [GRCh38]
Chr1:10377970..11078937 [GRCh37]
Chr1:10300557..11001524 [NCBI36]
Chr1:1p36.22
uncertain significance
GRCh38/hg38 1p36.22-36.21(chr1:11021751-15236671)x3 copy number gain See cases [RCV000141823] Chr1:11021751..15236671 [GRCh38]
Chr1:11081808..15563167 [GRCh37]
Chr1:11004395..15435754 [NCBI36]
Chr1:1p36.22-36.21
likely pathogenic
GRCh38/hg38 1p36.22-36.21(chr1:10264397-15780840)x1 copy number loss See cases [RCV000141438] Chr1:10264397..15780840 [GRCh38]
Chr1:10324455..16107335 [GRCh37]
Chr1:10247042..15979922 [NCBI36]
Chr1:1p36.22-36.21
pathogenic
GRCh38/hg38 1p36.31-36.13(chr1:6554885-16056011)x3 copy number gain See cases [RCV000142906] Chr1:6554885..16056011 [GRCh38]
Chr1:6614945..16382506 [GRCh37]
Chr1:6537532..16255093 [NCBI36]
Chr1:1p36.31-36.13
pathogenic
GRCh38/hg38 1p36.31-36.13(chr1:5363826-18360302)x1 copy number loss See cases [RCV000142771] Chr1:5363826..18360302 [GRCh38]
Chr1:5423886..18686796 [GRCh37]
Chr1:5323746..18559383 [NCBI36]
Chr1:1p36.31-36.13
pathogenic
NM_007375.4(TARDBP):c.*2252A>G single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000262134] Chr1:11024906 [GRCh38]
Chr1:11084963 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.1098C>G (p.Ala366=) single nucleotide variant Amyotrophic Lateral Sclerosis, Dominant [RCV000392664]|Amyotrophic lateral sclerosis type 10 [RCV000875373]|Amyotrophic lateral sclerosis type 10 [RCV001096237]|Frontotemporal dementia [RCV000353305]|Inborn genetic diseases [RCV002450837]|not provided [RCV003422211]|not specified [RCV000518153] Chr1:11022507 [GRCh38]
Chr1:11082564 [GRCh37]
Chr1:1p36.22
benign|likely benign
NM_007375.4(TARDBP):c.1150G>C (p.Gly384Arg) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000192195]|Amyotrophic lateral sclerosis type 10 [RCV000795453]|not provided [RCV000713823] Chr1:11022559 [GRCh38]
Chr1:11082616 [GRCh37]
Chr1:1p36.22
pathogenic|likely pathogenic|uncertain significance|not provided
NM_007375.4(TARDBP):c.1153T>G (p.Trp385Gly) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000192196] Chr1:11022562 [GRCh38]
Chr1:11082619 [GRCh37]
Chr1:1p36.22
pathogenic|not provided
NM_007375.4(TARDBP):c.720G>A (p.Ala240=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000298294]|Amyotrophic lateral sclerosis type 10 [RCV002059321] Chr1:11022129 [GRCh38]
Chr1:11082186 [GRCh37]
Chr1:1p36.22
likely benign|uncertain significance
NM_006610.4(MASP2):c.1727C>T (p.Thr576Ile) single nucleotide variant Immunodeficiency due to MASP-2 deficiency [RCV000276598] Chr1:11027219 [GRCh38]
Chr1:11087276 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.239-15G>A single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000381213]|Amyotrophic lateral sclerosis type 10 [RCV002059320]|not provided [RCV001795488] Chr1:11016829 [GRCh38]
Chr1:11076886 [GRCh37]
Chr1:1p36.22
likely benign|uncertain significance
NM_006610.4(MASP2):c.1243G>A (p.Asp415Asn) single nucleotide variant Immunodeficiency due to MASP-2 deficiency [RCV000375543]|not provided [RCV000964365] Chr1:11030230 [GRCh38]
Chr1:11090287 [GRCh37]
Chr1:1p36.22
benign|uncertain significance
Single allele complex Breast ductal adenocarcinoma [RCV000207058] Chr1:909238..24706269 [GRCh37]
Chr1:1p36.33-36.11
uncertain significance
chr1:909238-16736132 complex variant complex Breast ductal adenocarcinoma [RCV000207094] Chr1:909238..16736132 [GRCh37]
Chr1:1p36.33-36.13
uncertain significance
NM_006610.4(MASP2):c.1316G>A (p.Arg439His) single nucleotide variant Immunodeficiency due to MASP-2 deficiency [RCV000318612]|not provided [RCV000961253] Chr1:11027630 [GRCh38]
Chr1:11087687 [GRCh37]
Chr1:1p36.22
benign|likely benign
NM_007375.4(TARDBP):c.198T>C (p.Ala66=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000625045]|Amyotrophic lateral sclerosis type 10 [RCV000646151]|Inborn genetic diseases [RCV002418140]|not provided [RCV001668630]|not specified [RCV000516412] Chr1:11013925 [GRCh38]
Chr1:11073982 [GRCh37]
Chr1:1p36.22
benign|likely benign|conflicting interpretations of pathogenicity
NM_007375.4(TARDBP):c.238+9C>T single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000326560]|Amyotrophic lateral sclerosis type 10 [RCV001078891]|not provided [RCV000951658] Chr1:11013974 [GRCh38]
Chr1:11074031 [GRCh37]
Chr1:1p36.22
benign|likely benign
NM_007375.4(TARDBP):c.675A>G (p.Pro225=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000338255]|Amyotrophic lateral sclerosis type 10 [RCV000873994]|Inborn genetic diseases [RCV002374491]|not provided [RCV001545890] Chr1:11020560 [GRCh38]
Chr1:11080617 [GRCh37]
Chr1:1p36.22
benign|likely benign
GRCh37/hg19 1p36.33-36.22(chr1:82154-12699337)x1 copy number loss See cases [RCV000239416] Chr1:82154..12699337 [GRCh37]
Chr1:1p36.33-36.22
pathogenic
NM_007375.4(TARDBP):c.*1623T>A single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000285942] Chr1:11024277 [GRCh38]
Chr1:11084334 [GRCh37]
Chr1:1p36.22
likely benign|uncertain significance
NM_007375.4(TARDBP):c.*666G>A single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000281380] Chr1:11023320 [GRCh38]
Chr1:11083377 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.1731A>C (p.Gln577His) single nucleotide variant Immunodeficiency due to MASP-2 deficiency [RCV000364354]|not provided [RCV000971098] Chr1:11027215 [GRCh38]
Chr1:11087272 [GRCh37]
Chr1:1p36.22
benign|likely benign
GRCh37/hg19 1p36.33-36.21(chr1:746608-15077159)x1 copy number loss See cases [RCV000240403] Chr1:746608..15077159 [GRCh37]
Chr1:1p36.33-36.21
pathogenic
GRCh37/hg19 1p36.23-36.21(chr1:8255222-12785220)x3 copy number gain See cases [RCV000240284] Chr1:8255222..12785220 [GRCh37]
Chr1:1p36.23-36.21
likely pathogenic
NM_006610.4(MASP2):c.*171A>C single nucleotide variant Immunodeficiency due to MASP-2 deficiency [RCV000273230] Chr1:11026714 [GRCh38]
Chr1:11086771 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*2750G>A single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000396663] Chr1:11025404 [GRCh38]
Chr1:11085461 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*2773A>G single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000398843] Chr1:11025427 [GRCh38]
Chr1:11085484 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.*219C>T single nucleotide variant Immunodeficiency due to MASP-2 deficiency [RCV000301588] Chr1:11026666 [GRCh38]
Chr1:11086723 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*963C>T single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000400938] Chr1:11023617 [GRCh38]
Chr1:11083674 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*1622A>T single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000319698] Chr1:11024276 [GRCh38]
Chr1:11084333 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*208G>A single nucleotide variant Amyotrophic Lateral Sclerosis, Dominant [RCV000364084]|Amyotrophic lateral sclerosis type 10 [RCV001097985]|Frontotemporal dementia [RCV000269531]|not provided [RCV001555101] Chr1:11022862 [GRCh38]
Chr1:11082919 [GRCh37]
Chr1:1p36.22
benign|likely benign
NM_007375.4(TARDBP):c.*1081C>T single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000308344] Chr1:11023735 [GRCh38]
Chr1:11083792 [GRCh37]
Chr1:1p36.22
benign|likely benign
NM_006610.4(MASP2):c.*189G>A single nucleotide variant Immunodeficiency due to MASP-2 deficiency [RCV000365495] Chr1:11026696 [GRCh38]
Chr1:11086753 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*214T>C single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000388370] Chr1:11022868 [GRCh38]
Chr1:11082925 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*1008T>G single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000366619] Chr1:11023662 [GRCh38]
Chr1:11083719 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.3(TARDBP):c.-110C>T single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000367571] Chr1:11012646 [GRCh38]
Chr1:11072703 [GRCh37]
Chr1:1p36.22
likely benign|uncertain significance
NM_007375.4(TARDBP):c.*2740G>A single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000295354] Chr1:11025394 [GRCh38]
Chr1:11085451 [GRCh37]
Chr1:1p36.22
benign|likely benign
NM_007375.4(TARDBP):c.*2334G>A single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000329064] Chr1:11024988 [GRCh38]
Chr1:11085045 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.-42C>T single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000259969] Chr1:11012714 [GRCh38]
Chr1:11072771 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*1633del deletion Amyotrophic Lateral Sclerosis, Dominant [RCV000261200]|Frontotemporal dementia [RCV000316450] Chr1:11024277 [GRCh38]
Chr1:11084334 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*159A>C single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000327850] Chr1:11022813 [GRCh38]
Chr1:11082870 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*1597_*1600del deletion Amyotrophic Lateral Sclerosis, Dominant [RCV000274024]|Frontotemporal dementia [RCV000368674] Chr1:11024249..11024252 [GRCh38]
Chr1:11084306..11084309 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.-12-10_-12-9del deletion Amyotrophic Lateral Sclerosis, Dominant [RCV000265462]|Frontotemporal dementia [RCV000360165] Chr1:11013704..11013705 [GRCh38]
Chr1:11073761..11073762 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.*1084A>T single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000277861] Chr1:11023738 [GRCh38]
Chr1:11083795 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*2029C>T single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000390275] Chr1:11024683 [GRCh38]
Chr1:11084740 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*2331A>G single nucleotide variant Amyotrophic Lateral Sclerosis, Dominant [RCV000377600]|Amyotrophic lateral sclerosis type 10 [RCV001098078]|Frontotemporal dementia [RCV000322945]|Immunodeficiency due to MASP-2 deficiency [RCV000309062] Chr1:11024985 [GRCh38]
Chr1:11085042 [GRCh37]
Chr1:1p36.22
benign|likely benign
NM_007375.4(TARDBP):c.*129T>C single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000358284] Chr1:11022783 [GRCh38]
Chr1:11082840 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.*184C>T single nucleotide variant Amyotrophic Lateral Sclerosis, Dominant [RCV000369417]|Frontotemporal dementia [RCV000314809]|Immunodeficiency due to MASP-2 deficiency [RCV001101863] Chr1:11026701 [GRCh38]
Chr1:11086758 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.*505del deletion Amyotrophic Lateral Sclerosis, Dominant [RCV000294216]|Frontotemporal dementia [RCV000330501] Chr1:11023156 [GRCh38]
Chr1:11083213 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.1590C>T (p.Asp530=) single nucleotide variant Immunodeficiency due to MASP-2 deficiency [RCV000386253] Chr1:11027356 [GRCh38]
Chr1:11087413 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.3(TARDBP):c.-126G>T single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000390128] Chr1:11012630 [GRCh38]
Chr1:11072687 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*2046T>G single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000401360] Chr1:11024700 [GRCh38]
Chr1:11084757 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.499A>G (p.Met167Val) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000400226] Chr1:11018829 [GRCh38]
Chr1:11078886 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*842G>A single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000336489] Chr1:11023496 [GRCh38]
Chr1:11083553 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.1617T>C (p.Asn539=) single nucleotide variant Amyotrophic Lateral Sclerosis, Dominant [RCV000260724]|Frontotemporal dementia [RCV000316368]|Immunodeficiency due to MASP-2 deficiency [RCV000333994]|not provided [RCV000963738] Chr1:11027329 [GRCh38]
Chr1:11087386 [GRCh37]
Chr1:1p36.22
benign|likely benign
NM_006610.4(MASP2):c.*225T>C single nucleotide variant Amyotrophic Lateral Sclerosis, Dominant [RCV000368372]|Frontotemporal dementia [RCV000400242]|Immunodeficiency due to MASP-2 deficiency [RCV000392886] Chr1:11026660 [GRCh38]
Chr1:11086717 [GRCh37]
Chr1:1p36.22
benign
NM_007375.3(TARDBP):c.-122G>A single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001099681]|Amyotrophic lateral sclerosis type 10 [RCV001512430] Chr1:11012634 [GRCh38]
Chr1:11072691 [GRCh37]
Chr1:1p36.22
benign
NM_006610.4(MASP2):c.1479C>T (p.Ser493=) single nucleotide variant Amyotrophic Lateral Sclerosis, Dominant [RCV000262387]|Frontotemporal dementia [RCV000357134]|Immunodeficiency due to MASP-2 deficiency [RCV000294328]|not specified [RCV000455702] Chr1:11027467 [GRCh38]
Chr1:11087524 [GRCh37]
Chr1:1p36.22
benign
NM_007375.4(TARDBP):c.*862G>T single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000286313] Chr1:11023516 [GRCh38]
Chr1:11083573 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*2829dup duplication Amyotrophic Lateral Sclerosis, Dominant [RCV000298127]|Frontotemporal dementia [RCV000359870] Chr1:11025474..11025475 [GRCh38]
Chr1:11085531..11085532 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*2294_*2295insGTTTT insertion Amyotrophic Lateral Sclerosis, Dominant [RCV000267829]|Frontotemporal dementia [RCV000353235]|Immunodeficiency due to MASP-2 deficiency [RCV000394679] Chr1:11024947..11024948 [GRCh38]
Chr1:11085004..11085005 [GRCh37]
Chr1:1p36.22
benign
NM_007375.4(TARDBP):c.*1795A>G single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000339296] Chr1:11024449 [GRCh38]
Chr1:11084506 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*2154G>T single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000356925] Chr1:11024808 [GRCh38]
Chr1:11084865 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.*111C>T single nucleotide variant Immunodeficiency due to MASP-2 deficiency [RCV000326034] Chr1:11026774 [GRCh38]
Chr1:11086831 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*2360C>T single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000289215] Chr1:11025014 [GRCh38]
Chr1:11085071 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.-77G>A single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000300041] Chr1:11012679 [GRCh38]
Chr1:11072736 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*2005T>C single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000290163] Chr1:11024659 [GRCh38]
Chr1:11084716 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.3(TARDBP):c.-117G>A single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000402051] Chr1:11012639 [GRCh38]
Chr1:11072696 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*2538del deletion Amyotrophic Lateral Sclerosis, Dominant [RCV000344401]|Frontotemporal dementia [RCV000389658] Chr1:11025191 [GRCh38]
Chr1:11085248 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.*220A>G single nucleotide variant Immunodeficiency due to MASP-2 deficiency [RCV001099869] Chr1:11026665 [GRCh38]
Chr1:11086722 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.57A>G (p.Pro19=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001099683]|Amyotrophic lateral sclerosis type 10 [RCV002554944] Chr1:11013784 [GRCh38]
Chr1:11073841 [GRCh37]
Chr1:1p36.22
likely benign|uncertain significance
NM_007375.4(TARDBP):c.*591G>A single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001099774] Chr1:11023245 [GRCh38]
Chr1:11083302 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*616G>C single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001099775] Chr1:11023270 [GRCh38]
Chr1:11083327 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.945G>A (p.Ala315=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001096235]|Amyotrophic lateral sclerosis type 10 [RCV002058874]|not provided [RCV000416081] Chr1:11022354 [GRCh38]
Chr1:11082411 [GRCh37]
Chr1:1p36.22
likely benign|uncertain significance
GRCh37/hg19 1p36.32-36.21(chr1:4558588-13187457)x1 copy number loss See cases [RCV000446359] Chr1:4558588..13187457 [GRCh37]
Chr1:1p36.32-36.21
pathogenic
GRCh37/hg19 1p36.32-36.12(chr1:2749920-22564787)x1 copy number loss See cases [RCV000446470] Chr1:2749920..22564787 [GRCh37]
Chr1:1p36.32-36.12
pathogenic
GRCh37/hg19 1p36.23-36.22(chr1:7301946-11143298)x3 copy number gain See cases [RCV000448222] Chr1:7301946..11143298 [GRCh37]
Chr1:1p36.23-36.22
pathogenic
GRCh37/hg19 1p36.22-36.21(chr1:10722955-12910774)x1 copy number loss See cases [RCV000510444] Chr1:10722955..12910774 [GRCh37]
Chr1:1p36.22-36.21
likely pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)x3 copy number gain See cases [RCV000510383] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44
pathogenic
NM_007375.4(TARDBP):c.1043G>T (p.Gly348Val) single nucleotide variant Motor neuron disease [RCV000492607] Chr1:11022452 [GRCh38]
Chr1:11082509 [GRCh37]
Chr1:1p36.22
pathogenic
NM_007375.4(TARDBP):c.1122T>G (p.Tyr374Ter) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001855018]|Motor neuron disease [RCV000492707] Chr1:11022531 [GRCh38]
Chr1:11082588 [GRCh37]
Chr1:1p36.22
uncertain significance
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684) copy number gain See cases [RCV000510926] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44
pathogenic
NM_006610.4(MASP2):c.1514T>C (p.Leu505Pro) single nucleotide variant Inborn genetic diseases [RCV003304657] Chr1:11027432 [GRCh38]
Chr1:11087489 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.263C>T (p.Thr88Ile) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000646150] Chr1:11016868 [GRCh38]
Chr1:11076925 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.714+69dup duplication Amyotrophic lateral sclerosis type 10 [RCV000625046]|not provided [RCV001692234]|not specified [RCV001579709] Chr1:11020666..11020667 [GRCh38]
Chr1:11080723..11080724 [GRCh37]
Chr1:1p36.22
benign|no classifications from unflagged records
NM_007375.4(TARDBP):c.111G>A (p.Gly37=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000646152] Chr1:11013838 [GRCh38]
Chr1:11073895 [GRCh37]
Chr1:1p36.22
likely benign
GRCh37/hg19 1p36.22-36.21(chr1:10722725-14267773)x1 copy number loss See cases [RCV000512501] Chr1:10722725..14267773 [GRCh37]
Chr1:1p36.22-36.21
likely pathogenic
GRCh37/hg19 1p36.23-36.13(chr1:8850514-16272383)x1 copy number loss See cases [RCV000512226] Chr1:8850514..16272383 [GRCh37]
Chr1:1p36.23-36.13
likely pathogenic
NM_007375.4(TARDBP):c.87C>T (p.Ser29=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002524956]|Inborn genetic diseases [RCV002448554]|not provided [RCV000513594] Chr1:11013814 [GRCh38]
Chr1:11073871 [GRCh37]
Chr1:1p36.22
likely benign|conflicting interpretations of pathogenicity|uncertain significance
NM_007375.4(TARDBP):c.1122T>C (p.Tyr374=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002067008]|Inborn genetic diseases [RCV002440566]|not provided [RCV000713822] Chr1:11022531 [GRCh38]
Chr1:11082588 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.669C>G (p.Pro223=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001101666]|Amyotrophic lateral sclerosis type 10 [RCV001467552]|Inborn genetic diseases [RCV003303206]|TARDBP-related condition [RCV003965466]|not provided [RCV000713824] Chr1:11020554 [GRCh38]
Chr1:11080611 [GRCh37]
Chr1:1p36.22
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance
NM_007375.4(TARDBP):c.892G>T (p.Gly298Cys) single nucleotide variant not provided [RCV000713826] Chr1:11022301 [GRCh38]
Chr1:11082358 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.925G>A (p.Gly309Ser) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV000704698]|not provided [RCV001548592] Chr1:11022334 [GRCh38]
Chr1:11082391 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.715-243C>T single nucleotide variant not provided [RCV001565875] Chr1:11021881 [GRCh38]
Chr1:11081938 [GRCh37]
Chr1:1p36.22
likely benign
GRCh37/hg19 1p36.33-q44(chr1:47851-249228449)x3 copy number gain not provided [RCV000736295] Chr1:47851..249228449 [GRCh37]
Chr1:1p36.33-q44
pathogenic
GRCh37/hg19 1p36.33-q44(chr1:82154-249218992)x3 copy number gain not provided [RCV000736305] Chr1:82154..249218992 [GRCh37]
Chr1:1p36.33-q44
pathogenic
NC_000001.11:g.(?_11012634)_(11934865_?)del deletion Atrial fibrillation, familial, 6 [RCV001031444] Chr1:11072691..11994922 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.714+277T>C single nucleotide variant not provided [RCV001570791] Chr1:11020876 [GRCh38]
Chr1:11080933 [GRCh37]
Chr1:1p36.22
likely benign
NM_006610.4(MASP2):c.1574A>G (p.His525Arg) single nucleotide variant Immunodeficiency due to MASP-2 deficiency [RCV000768264] Chr1:11027372 [GRCh38]
Chr1:11087429 [GRCh37]
Chr1:1p36.22
uncertain significance
GRCh37/hg19 1p36.33-36.22(chr1:82154-11784118)x1 copy number loss See cases [RCV000790592] Chr1:82154..11784118 [GRCh37]
Chr1:1p36.33-36.22
pathogenic
NM_007375.4(TARDBP):c.471A>G (p.Thr157=) single nucleotide variant not provided [RCV000917702] Chr1:11018801 [GRCh38]
Chr1:11078858 [GRCh37]
Chr1:1p36.22
likely benign
GRCh37/hg19 1p36.22(chr1:9852396-11909475)x1 copy number loss not provided [RCV001005065] Chr1:9852396..11909475 [GRCh37]
Chr1:1p36.22
likely pathogenic
NM_007375.4(TARDBP):c.975C>T (p.Ala325=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003769322]|not provided [RCV000993302] Chr1:11022384 [GRCh38]
Chr1:11082441 [GRCh37]
Chr1:1p36.22
benign|likely benign
GRCh37/hg19 1p36.22-21.1(chr1:103343285-103455144)x3 copy number gain Global developmental delay [RCV000787285] Chr1:103343285..103455144 [GRCh37]
Chr1:1p36.22-21.1
uncertain significance
NM_007375.4(TARDBP):c.963C>T (p.Ala321=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001096236]|Amyotrophic lateral sclerosis type 10 [RCV002557978] Chr1:11022372 [GRCh38]
Chr1:11082429 [GRCh37]
Chr1:1p36.22
likely benign|uncertain significance
NM_007375.4(TARDBP):c.*2123T>C single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001096342]|Immunodeficiency due to MASP-2 deficiency [RCV001096341] Chr1:11024777 [GRCh38]
Chr1:11084834 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.1129T>C (p.Ser377Pro) single nucleotide variant Frontotemporal dementia [RCV000986235] Chr1:11022538 [GRCh38]
Chr1:11082595 [GRCh37]
Chr1:1p36.22
likely pathogenic
NM_007375.4(TARDBP):c.*2260T>G single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001098077] Chr1:11024914 [GRCh38]
Chr1:11084971 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.1231G>A (p.Val411Met) single nucleotide variant Immunodeficiency due to MASP-2 deficiency [RCV001098171] Chr1:11030242 [GRCh38]
Chr1:11090299 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*556G>A single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001097989] Chr1:11023210 [GRCh38]
Chr1:11083267 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.1108_1122dup (p.Gly370_Tyr374dup) duplication Amyotrophic lateral sclerosis type 10 [RCV000794845] Chr1:11022515..11022516 [GRCh38]
Chr1:11082572..11082573 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.893G>T (p.Gly298Val) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001095402]|Amyotrophic lateral sclerosis type 10 [RCV002555973] Chr1:11022302 [GRCh38]
Chr1:11082359 [GRCh37]
Chr1:1p36.22
likely pathogenic|uncertain significance
GRCh37/hg19 1p36.22-36.21(chr1:10246640-12841900)x1 copy number loss not provided [RCV000846372] Chr1:10246640..12841900 [GRCh37]
Chr1:1p36.22-36.21
uncertain significance
NM_007375.4(TARDBP):c.36C>T (p.Asn12=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001099682]|Amyotrophic lateral sclerosis type 10 [RCV002067757]|Inborn genetic diseases [RCV002348556] Chr1:11013763 [GRCh38]
Chr1:11073820 [GRCh37]
Chr1:1p36.22
likely benign|uncertain significance
NM_007375.4(TARDBP):c.*142T>C single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001096240] Chr1:11022796 [GRCh38]
Chr1:11082853 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.1886G>C (p.Cys629Ser) single nucleotide variant Immunodeficiency due to MASP-2 deficiency [RCV001096431] Chr1:11027060 [GRCh38]
Chr1:11087117 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.1470T>G (p.His490Gln) single nucleotide variant Immunodeficiency due to MASP-2 deficiency [RCV001096432] Chr1:11027476 [GRCh38]
Chr1:11087533 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*551C>G single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001097988] Chr1:11023205 [GRCh38]
Chr1:11083262 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*2333C>T single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001098079] Chr1:11024987 [GRCh38]
Chr1:11085044 [GRCh37]
Chr1:1p36.22
likely benign
NM_006610.4(MASP2):c.1314C>T (p.Ala438=) single nucleotide variant Immunodeficiency due to MASP-2 deficiency [RCV001098170] Chr1:11027632 [GRCh38]
Chr1:11087689 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*2823T>C single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001099866] Chr1:11025477 [GRCh38]
Chr1:11085534 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.962C>A (p.Ala321Asp) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001207766] Chr1:11022371 [GRCh38]
Chr1:11082428 [GRCh37]
Chr1:1p36.22
likely pathogenic|uncertain significance
NM_007375.4(TARDBP):c.717T>C (p.Ile239=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001101667] Chr1:11022126 [GRCh38]
Chr1:11082183 [GRCh37]
Chr1:1p36.22
uncertain significance
GRCh37/hg19 1p36.22(chr1:10908411-11158092)x3 copy number gain not provided [RCV001005066] Chr1:10908411..11158092 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*306C>T single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001097986] Chr1:11022960 [GRCh38]
Chr1:11083017 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.402+191C>T single nucleotide variant not provided [RCV001566205] Chr1:11017198 [GRCh38]
Chr1:11077255 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.239-116G>T single nucleotide variant not provided [RCV001570187] Chr1:11016728 [GRCh38]
Chr1:11076785 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.543+147A>G single nucleotide variant not provided [RCV001717379] Chr1:11019020 [GRCh38]
Chr1:11079077 [GRCh37]
Chr1:1p36.22
benign
NM_007375.4(TARDBP):c.-12-263_-12-262del microsatellite not provided [RCV001637477] Chr1:11013451..11013452 [GRCh38]
Chr1:11073508..11073509 [GRCh37]
Chr1:1p36.22
benign
NM_007375.4(TARDBP):c.24C>T (p.Thr8=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002064747]|Inborn genetic diseases [RCV002427196] Chr1:11013751 [GRCh38]
Chr1:11073808 [GRCh37]
Chr1:1p36.22
benign|likely benign
NM_006610.4(MASP2):c.*212A>G single nucleotide variant Immunodeficiency due to MASP-2 deficiency [RCV001101862] Chr1:11026673 [GRCh38]
Chr1:11086730 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*663C>T single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001099776] Chr1:11023317 [GRCh38]
Chr1:11083374 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*763G>A single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001099778] Chr1:11023417 [GRCh38]
Chr1:11083474 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.1468C>T (p.His490Tyr) single nucleotide variant Immunodeficiency due to MASP-2 deficiency [RCV001096433] Chr1:11027478 [GRCh38]
Chr1:11087535 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.402+213dup duplication not provided [RCV001565294] Chr1:11017202..11017203 [GRCh38]
Chr1:11077259..11077260 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.714+79C>T single nucleotide variant not provided [RCV001562917] Chr1:11020678 [GRCh38]
Chr1:11080735 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.238+86A>G single nucleotide variant not provided [RCV001562964] Chr1:11014051 [GRCh38]
Chr1:11074108 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.543+290A>G single nucleotide variant not provided [RCV001575866] Chr1:11019163 [GRCh38]
Chr1:11079220 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.543+265A>G single nucleotide variant not provided [RCV001556131] Chr1:11019138 [GRCh38]
Chr1:11079195 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.238+228A>G single nucleotide variant not provided [RCV001718250] Chr1:11014193 [GRCh38]
Chr1:11074250 [GRCh37]
Chr1:1p36.22
benign
NM_007375.4(TARDBP):c.403-65A>G single nucleotide variant not provided [RCV001718360] Chr1:11018668 [GRCh38]
Chr1:11078725 [GRCh37]
Chr1:1p36.22
benign
NM_007375.4(TARDBP):c.544-156A>G single nucleotide variant not provided [RCV001550822] Chr1:11020273 [GRCh38]
Chr1:11080330 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.715-126del deletion not provided [RCV001595656] Chr1:11021998 [GRCh38]
Chr1:11082055 [GRCh37]
Chr1:1p36.22
benign
NM_007375.4(TARDBP):c.402+213del deletion not provided [RCV001638915] Chr1:11017203 [GRCh38]
Chr1:11077260 [GRCh37]
Chr1:1p36.22
benign
NM_007375.4(TARDBP):c.544-184C>T single nucleotide variant not provided [RCV001596360] Chr1:11020245 [GRCh38]
Chr1:11080302 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.714+166del deletion not provided [RCV001689307] Chr1:11020751 [GRCh38]
Chr1:11080808 [GRCh37]
Chr1:1p36.22
benign
NM_007375.4(TARDBP):c.402+110C>T single nucleotide variant not provided [RCV001689084] Chr1:11017117 [GRCh38]
Chr1:11077174 [GRCh37]
Chr1:1p36.22
benign
NM_007375.4(TARDBP):c.*670T>C single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001099777] Chr1:11023324 [GRCh38]
Chr1:11083381 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.*311T>C single nucleotide variant Immunodeficiency due to MASP-2 deficiency [RCV001099867] Chr1:11026574 [GRCh38]
Chr1:11086631 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.*282C>A single nucleotide variant Immunodeficiency due to MASP-2 deficiency [RCV001099868] Chr1:11026603 [GRCh38]
Chr1:11086660 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*954A>G single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001101758] Chr1:11023608 [GRCh38]
Chr1:11083665 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.714+166dup duplication not provided [RCV001648450] Chr1:11020750..11020751 [GRCh38]
Chr1:11080807..11080808 [GRCh37]
Chr1:1p36.22
benign
NM_007375.4(TARDBP):c.*56C>T single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001096238] Chr1:11022710 [GRCh38]
Chr1:11082767 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*560A>T single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001099773] Chr1:11023214 [GRCh38]
Chr1:11083271 [GRCh37]
Chr1:1p36.22
uncertain significance
GRCh37/hg19 1p36.22(chr1:11053101-11336968)x1 copy number loss See cases [RCV001194542] Chr1:11053101..11336968 [GRCh37]
Chr1:1p36.22
likely pathogenic
NM_007375.4(TARDBP):c.1132A>G (p.Asn378Asp) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001208497] Chr1:11022541 [GRCh38]
Chr1:11082598 [GRCh37]
Chr1:1p36.22
likely pathogenic|uncertain significance
NM_007375.4(TARDBP):c.*343G>A single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001097987] Chr1:11022997 [GRCh38]
Chr1:11083054 [GRCh37]
Chr1:1p36.22
benign
NM_007375.4(TARDBP):c.550C>A (p.Gln184Lys) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001235559] Chr1:11020435 [GRCh38]
Chr1:11080492 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.*64C>T single nucleotide variant Immunodeficiency due to MASP-2 deficiency [RCV001101864] Chr1:11026821 [GRCh38]
Chr1:11086878 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.1972A>G (p.Met658Val) single nucleotide variant Immunodeficiency due to MASP-2 deficiency [RCV001101865] Chr1:11026974 [GRCh38]
Chr1:11087031 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.411A>G (p.Lys137=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002559644]|TARDBP-related condition [RCV003953563]|not provided [RCV001171751] Chr1:11018741 [GRCh38]
Chr1:11078798 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.*2749T>C single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001098080] Chr1:11025403 [GRCh38]
Chr1:11085460 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.*73G>C single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001096239]|TARDBP-related condition [RCV003405301] Chr1:11022727 [GRCh38]
Chr1:11082784 [GRCh37]
Chr1:1p36.22
benign|uncertain significance
NM_007375.4(TARDBP):c.208A>G (p.Asn70Asp) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001211878] Chr1:11013935 [GRCh38]
Chr1:11073992 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.1060C>G (p.Gln354Glu) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001095433] Chr1:11022469 [GRCh38]
Chr1:11082526 [GRCh37]
Chr1:1p36.22
likely pathogenic
NM_007375.4(TARDBP):c.1121A>T (p.Tyr374Phe) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002539645]|not provided [RCV001663537] Chr1:11022530 [GRCh38]
Chr1:11082587 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.623G>A (p.Arg208Gln) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001333649] Chr1:11020508 [GRCh38]
Chr1:11080565 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.894T>C (p.Gly298=) single nucleotide variant not provided [RCV001288869] Chr1:11022303 [GRCh38]
Chr1:11082360 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.699A>G (p.Thr233=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001475232] Chr1:11020584 [GRCh38]
Chr1:11080641 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.1101C>T (p.Phe367=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001475951] Chr1:11022510 [GRCh38]
Chr1:11082567 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.544-6G>C single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001408016] Chr1:11020423 [GRCh38]
Chr1:11080480 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.715-301G>T single nucleotide variant not provided [RCV001616611] Chr1:11021823 [GRCh38]
Chr1:11081880 [GRCh37]
Chr1:1p36.22
benign
NM_007375.4(TARDBP):c.-13+95C>T single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001512431] Chr1:11012838 [GRCh38]
Chr1:11072895 [GRCh37]
Chr1:1p36.22
benign
NM_007375.4(TARDBP):c.227A>G (p.Asn76Ser) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001911047] Chr1:11013954 [GRCh38]
Chr1:11074011 [GRCh37]
Chr1:1p36.22
uncertain significance
GRCh37/hg19 1p36.33-36.13(chr1:849466-17525065)x1 copy number loss not provided [RCV001832902] Chr1:849466..17525065 [GRCh37]
Chr1:1p36.33-36.13
pathogenic
NM_007375.4(TARDBP):c.1069G>C (p.Gly357Arg) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001985349] Chr1:11022478 [GRCh38]
Chr1:11082535 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.1015A>G (p.Met339Val) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001934211] Chr1:11022424 [GRCh38]
Chr1:11082481 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.1056T>C (p.Asn352=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001957773] Chr1:11022465 [GRCh38]
Chr1:11082522 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.1155G>A (p.Trp385Ter) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002013790] Chr1:11022564 [GRCh38]
Chr1:11082621 [GRCh37]
Chr1:1p36.22
uncertain significance
NC_000001.10:g.(?_8616514)_(12476900_?)dup duplication Immunodeficiency 14 [RCV001920571] Chr1:8616514..12476900 [GRCh37]
Chr1:1p36.23-36.22
uncertain significance
NM_007375.4(TARDBP):c.1187G>A (p.Gly396Asp) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV001882100] Chr1:11022596 [GRCh38]
Chr1:11082653 [GRCh37]
Chr1:1p36.22
uncertain significance
NC_000001.10:g.(?_6485016)_(12569078_?)del deletion not provided [RCV001940096] Chr1:6485016..12569078 [GRCh37]
Chr1:1p36.31-36.22
uncertain significance
NC_000001.10:g.(?_10003560)_(11346188_?)del deletion Peroxisome biogenesis disorder, complementation group K [RCV001994817] Chr1:10003560..11346188 [GRCh37]
Chr1:1p36.22
pathogenic
NM_007375.4(TARDBP):c.900A>G (p.Gly300=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002130446] Chr1:11022309 [GRCh38]
Chr1:11082366 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.714+17C>T single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002145996] Chr1:11020616 [GRCh38]
Chr1:11080673 [GRCh37]
Chr1:1p36.22
likely benign
NM_006610.4(MASP2):c.1515_1516dup (p.Ser506fs) duplication not provided [RCV002224614] Chr1:11027429..11027430 [GRCh38]
Chr1:11087486..11087487 [GRCh37]
Chr1:1p36.22
likely pathogenic
NM_007375.4(TARDBP):c.239-11G>A single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002168795] Chr1:11016833 [GRCh38]
Chr1:11076890 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.330T>G (p.Gly110=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002108148]|Inborn genetic diseases [RCV002325627] Chr1:11016935 [GRCh38]
Chr1:11076992 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.544-17C>T single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002076916] Chr1:11020412 [GRCh38]
Chr1:11080469 [GRCh37]
Chr1:1p36.22
benign
NM_007375.4(TARDBP):c.402+19A>G single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002134119] Chr1:11017026 [GRCh38]
Chr1:11077083 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.543+9G>A single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002114774] Chr1:11018882 [GRCh38]
Chr1:11078939 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.162C>T (p.Val54=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002121281]|Inborn genetic diseases [RCV002400343] Chr1:11013889 [GRCh38]
Chr1:11073946 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.543+15G>A single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002117569] Chr1:11018888 [GRCh38]
Chr1:11078945 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.622C>A (p.Arg208=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002218136] Chr1:11020507 [GRCh38]
Chr1:11080564 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.189C>T (p.Ala63=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002102002] Chr1:11013916 [GRCh38]
Chr1:11073973 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.403-5T>C single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002219199]|TARDBP-related condition [RCV003893212] Chr1:11018728 [GRCh38]
Chr1:11078785 [GRCh37]
Chr1:1p36.22
likely benign
NC_000001.10:g.(?_10535024)_(11107264_?)dup duplication Peroxisome biogenesis disorder, complementation group K [RCV003113536] Chr1:10535024..11107264 [GRCh37]
Chr1:1p36.22
uncertain significance
NC_000001.10:g.(?_10698999)_(11907741_?)dup duplication Atrial fibrillation, familial, 6 [RCV003116537] Chr1:10698999..11907741 [GRCh37]
Chr1:1p36.22
uncertain significance
NC_000001.10:g.(?_9770514)_(11264780_?)del deletion Immunodeficiency 14 [RCV003116291] Chr1:9770514..11264780 [GRCh37]
Chr1:1p36.22
uncertain significance
NC_000001.10:g.(?_10753911)_(11854615_?)dup duplication not provided [RCV003113615] Chr1:10753911..11854615 [GRCh37]
Chr1:1p36.22
uncertain significance
NC_000001.10:g.(?_9304994)_(12569078_?)dup duplication Charcot-Marie-Tooth disease type 2 [RCV003119499] Chr1:9304994..12569078 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.80_97delinsAT (p.Leu27fs) indel Inborn genetic diseases [RCV002419184] Chr1:11013807..11013824 [GRCh38]
Chr1:11073864..11073881 [GRCh37]
Chr1:1p36.22
uncertain significance
NC_000001.11:g.10115497_16283149dup duplication not specified [RCV002286386] Chr1:10115497..16283149 [GRCh38]
Chr1:1p36.22-36.13
likely pathogenic
NM_007375.4(TARDBP):c.1075A>G (p.Met359Val) single nucleotide variant Inborn genetic diseases [RCV002419653] Chr1:11022484 [GRCh38]
Chr1:11082541 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.121C>T (p.Leu41Phe) single nucleotide variant Inborn genetic diseases [RCV002368776] Chr1:11013848 [GRCh38]
Chr1:11073905 [GRCh37]
Chr1:1p36.22
uncertain significance
GRCh37/hg19 1p36.33-36.22(chr1:849467-12448956)x1 copy number loss not provided [RCV002473951] Chr1:849467..12448956 [GRCh37]
Chr1:1p36.33-36.22
pathogenic
NM_007375.4(TARDBP):c.792C>T (p.His264=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003099791]|Inborn genetic diseases [RCV002416775]|not provided [RCV003426404] Chr1:11022201 [GRCh38]
Chr1:11082258 [GRCh37]
Chr1:1p36.22
benign|likely benign
NM_007375.4(TARDBP):c.1173delinsCAATGCG (p.Ala391_Gly392insAsnAla) indel not provided [RCV002474374] Chr1:11022582 [GRCh38]
Chr1:11082639 [GRCh37]
Chr1:1p36.22
uncertain significance
GRCh37/hg19 1p36.31-36.13(chr1:6758933-19287770)x1 copy number loss not provided [RCV002474779] Chr1:6758933..19287770 [GRCh37]
Chr1:1p36.31-36.13
pathogenic
NM_007375.4(TARDBP):c.1141G>T (p.Ala381Ser) single nucleotide variant Inborn genetic diseases [RCV002460208] Chr1:11022550 [GRCh38]
Chr1:11082607 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.336A>G (p.Pro112=) single nucleotide variant Inborn genetic diseases [RCV002451700] Chr1:11016941 [GRCh38]
Chr1:11076998 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.1070G>A (p.Gly357Asp) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003775016]|not specified [RCV002308531] Chr1:11022479 [GRCh38]
Chr1:11082536 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.342A>G (p.Lys114=) single nucleotide variant Inborn genetic diseases [RCV002457002] Chr1:11016947 [GRCh38]
Chr1:11077004 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.967A>G (p.Met323Val) single nucleotide variant Inborn genetic diseases [RCV002376547] Chr1:11022376 [GRCh38]
Chr1:11082433 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.263C>G (p.Thr88Arg) single nucleotide variant Inborn genetic diseases [RCV002428626] Chr1:11016868 [GRCh38]
Chr1:11076925 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.774C>G (p.Ser258=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003099733]|Inborn genetic diseases [RCV002409661] Chr1:11022183 [GRCh38]
Chr1:11082240 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.911G>A (p.Gly304Asp) single nucleotide variant Inborn genetic diseases [RCV002378703] Chr1:11022320 [GRCh38]
Chr1:11082377 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.655G>A (p.Asp219Asn) single nucleotide variant Inborn genetic diseases [RCV002364404] Chr1:11020540 [GRCh38]
Chr1:11080597 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.946T>C (p.Phe316Leu) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002295398] Chr1:11022355 [GRCh38]
Chr1:11082412 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.1213A>G (p.Met405Val) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003098090]|Inborn genetic diseases [RCV002357895] Chr1:11022622 [GRCh38]
Chr1:11082679 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.642C>T (p.Tyr214=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003776256]|Inborn genetic diseases [RCV002361717] Chr1:11020527 [GRCh38]
Chr1:11080584 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.149G>C (p.Cys50Ser) single nucleotide variant Inborn genetic diseases [RCV002389876] Chr1:11013876 [GRCh38]
Chr1:11073933 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.1005T>A (p.Gly335=) single nucleotide variant Inborn genetic diseases [RCV002410598] Chr1:11022414 [GRCh38]
Chr1:11082471 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.360G>A (p.Leu120=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003099618]|Inborn genetic diseases [RCV002455323] Chr1:11016965 [GRCh38]
Chr1:11077022 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.1047A>G (p.Pro349=) single nucleotide variant Inborn genetic diseases [RCV002405778] Chr1:11022456 [GRCh38]
Chr1:11082513 [GRCh37]
Chr1:1p36.22
likely benign
NM_006610.4(MASP2):c.1474G>A (p.Ala492Thr) single nucleotide variant Inborn genetic diseases [RCV002858734] Chr1:11027472 [GRCh38]
Chr1:11087529 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.941G>C (p.Gly314Ala) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002971669] Chr1:11022350 [GRCh38]
Chr1:11082407 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.1923T>G (p.Asp641Glu) single nucleotide variant Inborn genetic diseases [RCV002859158] Chr1:11027023 [GRCh38]
Chr1:11087080 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.1173A>G (p.Ala391=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002996256] Chr1:11022582 [GRCh38]
Chr1:11082639 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.543+112C>A single nucleotide variant Inborn genetic diseases [RCV002946294] Chr1:11018985 [GRCh38]
Chr1:11079042 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.715-18A>G single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002972344] Chr1:11022106 [GRCh38]
Chr1:11082163 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.1167_1172dup (p.Ala391_Gly392insAsnAla) duplication Amyotrophic lateral sclerosis type 10 [RCV002880627] Chr1:11022574..11022575 [GRCh38]
Chr1:11082631..11082632 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.1798G>A (p.Ala600Thr) single nucleotide variant Inborn genetic diseases [RCV002883467] Chr1:11027148 [GRCh38]
Chr1:11087205 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.587G>A (p.Gly196Glu) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002953099] Chr1:11020472 [GRCh38]
Chr1:11080529 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.1864G>A (p.Glu622Lys) single nucleotide variant Inborn genetic diseases [RCV002849442] Chr1:11027082 [GRCh38]
Chr1:11087139 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.609T>G (p.Thr203=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003038952] Chr1:11020494 [GRCh38]
Chr1:11080551 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.636T>G (p.Ser212=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003039303] Chr1:11020521 [GRCh38]
Chr1:11080578 [GRCh37]
Chr1:1p36.22
likely benign
NM_006610.4(MASP2):c.1453G>A (p.Val485Ile) single nucleotide variant Inborn genetic diseases [RCV002759724] Chr1:11027493 [GRCh38]
Chr1:11087550 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.238+16G>T single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003077526] Chr1:11013981 [GRCh38]
Chr1:11074038 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.714+18G>A single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003018795] Chr1:11020617 [GRCh38]
Chr1:11080674 [GRCh37]
Chr1:1p36.22
likely benign
NM_006610.4(MASP2):c.1309T>C (p.Ser437Pro) single nucleotide variant Inborn genetic diseases [RCV002757509] Chr1:11027637 [GRCh38]
Chr1:11087694 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.1702G>C (p.Gly568Arg) single nucleotide variant Inborn genetic diseases [RCV002844437] Chr1:11027244 [GRCh38]
Chr1:11087301 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.939T>C (p.Phe313=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002622509] Chr1:11022348 [GRCh38]
Chr1:11082405 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.930G>A (p.Gly310=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002638482] Chr1:11022339 [GRCh38]
Chr1:11082396 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.1054A>G (p.Asn352Asp) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002761523] Chr1:11022463 [GRCh38]
Chr1:11082520 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.1411G>A (p.Ala471Thr) single nucleotide variant Inborn genetic diseases [RCV002822221] Chr1:11027535 [GRCh38]
Chr1:11087592 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.1157G>A (p.Gly386Glu) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003007169] Chr1:11022566 [GRCh38]
Chr1:11082623 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.1582G>A (p.Gly528Ser) single nucleotide variant Inborn genetic diseases [RCV002826992] Chr1:11027364 [GRCh38]
Chr1:11087421 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.1123A>G (p.Ser375Gly) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002664150] Chr1:11022532 [GRCh38]
Chr1:11082589 [GRCh37]
Chr1:1p36.22
likely pathogenic
NM_007375.4(TARDBP):c.312C>T (p.Ser104=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002711049]|TARDBP-related condition [RCV003961114] Chr1:11016917 [GRCh38]
Chr1:11076974 [GRCh37]
Chr1:1p36.22
likely benign
NM_006610.4(MASP2):c.1853G>C (p.Cys618Ser) single nucleotide variant Inborn genetic diseases [RCV002931214] Chr1:11027093 [GRCh38]
Chr1:11087150 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.1131dup (p.Asn378Ter) duplication Amyotrophic lateral sclerosis type 10 [RCV002812118]|Amyotrophic lateral sclerosis type 10 [RCV003985874] Chr1:11022539..11022540 [GRCh38]
Chr1:11082596..11082597 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.2011A>C (p.Lys671Gln) single nucleotide variant Inborn genetic diseases [RCV002673212] Chr1:11026935 [GRCh38]
Chr1:11086992 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.944C>T (p.Ala315Val) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002676580] Chr1:11022353 [GRCh38]
Chr1:11082410 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.403-14A>G single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003065615] Chr1:11018719 [GRCh38]
Chr1:11078776 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.1129T>A (p.Ser377Thr) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003089575]|TARDBP-related condition [RCV003420327] Chr1:11022538 [GRCh38]
Chr1:11082595 [GRCh37]
Chr1:1p36.22
likely pathogenic|uncertain significance
NM_007375.4(TARDBP):c.239-12C>T single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002900502] Chr1:11016832 [GRCh38]
Chr1:11076889 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.543+20G>T single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003087467] Chr1:11018893 [GRCh38]
Chr1:11078950 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.1051G>A (p.Gly351Ser) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002578481] Chr1:11022460 [GRCh38]
Chr1:11082517 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.465T>C (p.Tyr155=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002631625] Chr1:11018795 [GRCh38]
Chr1:11078852 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.495A>G (p.Arg165=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002810235] Chr1:11018825 [GRCh38]
Chr1:11078882 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.976G>A (p.Ala326Thr) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV002725576] Chr1:11022385 [GRCh38]
Chr1:11082442 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.1719G>C (p.Trp573Cys) single nucleotide variant Immunodeficiency due to MASP-2 deficiency [RCV003132596]|Inborn genetic diseases [RCV003250848] Chr1:11027227 [GRCh38]
Chr1:11087284 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.1133A>G (p.Asn378Ser) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003226896] Chr1:11022542 [GRCh38]
Chr1:11082599 [GRCh37]
Chr1:1p36.22
likely pathogenic
NC_000001.10:g.4481271_20530242del deletion Chromosome 1p36 deletion syndrome [RCV003159574] Chr1:4481271..20530242 [GRCh37]
Chr1:1p36.32-36.12
pathogenic
NM_007375.4(TARDBP):c.*81_*84del deletion Inborn genetic diseases [RCV003185100] Chr1:11022732..11022735 [GRCh38]
Chr1:11082789..11082792 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.1102G>A (p.Gly368Ser) single nucleotide variant Inborn genetic diseases [RCV003173456] Chr1:11022511 [GRCh38]
Chr1:11082568 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.1072A>T (p.Asn358Tyr) single nucleotide variant not provided [RCV003319780] Chr1:11022481 [GRCh38]
Chr1:11082538 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.1947G>T (p.Val649=) single nucleotide variant not provided [RCV003422557] Chr1:11026999 [GRCh38]
Chr1:11087056 [GRCh37]
Chr1:1p36.22
likely benign
NM_006610.4(MASP2):c.1780G>C (p.Asp594His) single nucleotide variant Inborn genetic diseases [RCV003386411] Chr1:11027166 [GRCh38]
Chr1:11087223 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.780C>T (p.Ala260=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003777534]|Inborn genetic diseases [RCV003363884] Chr1:11022189 [GRCh38]
Chr1:11082246 [GRCh37]
Chr1:1p36.22
likely benign
GRCh38/hg38 1p36.33-35.1(chr1:99125-34026935)x3 copy number gain Trisomy 12p [RCV003447845] Chr1:99125..34026935 [GRCh38]
Chr1:1p36.33-35.1
pathogenic
NM_007375.4(TARDBP):c.169G>A (p.Val57Ile) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003797315] Chr1:11013896 [GRCh38]
Chr1:11073953 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.239-18T>C single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003792411] Chr1:11016826 [GRCh38]
Chr1:11076883 [GRCh37]
Chr1:1p36.22
benign
NM_007375.4(TARDBP):c.990A>G (p.Leu330=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003797737] Chr1:11022399 [GRCh38]
Chr1:11082456 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.1148T>C (p.Ile383Thr) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003806998] Chr1:11022557 [GRCh38]
Chr1:11082614 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.639G>C (p.Gln213His) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003807125] Chr1:11020524 [GRCh38]
Chr1:11080581 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.909A>G (p.Gln303=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003787486] Chr1:11022318 [GRCh38]
Chr1:11082375 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.715-11A>G single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003794635] Chr1:11022113 [GRCh38]
Chr1:11082170 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.543+16C>G single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003787839] Chr1:11018889 [GRCh38]
Chr1:11078946 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.1122T>A (p.Tyr374Ter) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003804946] Chr1:11022531 [GRCh38]
Chr1:11082588 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.238+21dup duplication Amyotrophic lateral sclerosis type 10 [RCV003782705] Chr1:11013981..11013982 [GRCh38]
Chr1:11074038..11074039 [GRCh37]
Chr1:1p36.22
benign
NM_007375.4(TARDBP):c.290A>G (p.Lys97Arg) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003781443] Chr1:11016895 [GRCh38]
Chr1:11076952 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.114G>A (p.Ala38=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003783297] Chr1:11013841 [GRCh38]
Chr1:11073898 [GRCh37]
Chr1:1p36.22
likely benign
NM_006610.4(MASP2):c.1254_1261delinsCCTCACACACTC (p.Trp418fs) indel Immunodeficiency due to MASP-2 deficiency [RCV003486147] Chr1:11030212..11030219 [GRCh38]
Chr1:11090269..11090276 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.544-15T>C single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003804601] Chr1:11020414 [GRCh38]
Chr1:11080471 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.505_506delinsTT (p.Asp169Phe) indel Amyotrophic lateral sclerosis type 10 [RCV003792179] Chr1:11018835..11018836 [GRCh38]
Chr1:11078892..11078893 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.1179G>A (p.Ser393=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003791335] Chr1:11022588 [GRCh38]
Chr1:11082645 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.1141G>A (p.Ala381Thr) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003788813] Chr1:11022550 [GRCh38]
Chr1:11082607 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.776A>G (p.Asn259Ser) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003780897] Chr1:11022185 [GRCh38]
Chr1:11082242 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_006610.4(MASP2):c.1903G>A (p.Gly635Arg) single nucleotide variant Immunodeficiency due to MASP-2 deficiency [RCV003486146] Chr1:11027043 [GRCh38]
Chr1:11087100 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.95C>T (p.Thr32Ile) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003812555] Chr1:11013822 [GRCh38]
Chr1:11073879 [GRCh37]
Chr1:1p36.22
uncertain significance
NM_007375.4(TARDBP):c.12T>C (p.Tyr4=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003800962] Chr1:11013739 [GRCh38]
Chr1:11073796 [GRCh37]
Chr1:1p36.22
likely benign
NM_007375.4(TARDBP):c.273A>G (p.Ser91=) single nucleotide variant Amyotrophic lateral sclerosis type 10 [RCV003802308] Chr1:11016878 [GRCh38]
Chr1:11076935 [GRCh37]
Chr1:1p36.22
likely benign
NM_006610.4(MASP2):c.1773G>A (p.Pro591=) single nucleotide variant MASP2-related condition [RCV003931366]|not provided [RCV003884984] Chr1:11027173 [GRCh38]
Chr1:11087230 [GRCh37]
Chr1:1p36.22
likely benign
GRCh37/hg19 1p36.31-36.21(chr1:6330828-12910774)x1 copy number loss not specified [RCV003987128] Chr1:6330828..12910774 [GRCh37]
Chr1:1p36.31-36.21
pathogenic
NM_006610.4(MASP2):c.1647G>A (p.Thr549=) single nucleotide variant MASP2-related condition [RCV003934725] Chr1:11027299 [GRCh38]
Chr1:11087356 [GRCh37]
Chr1:1p36.22
likely benign
NM_006610.4(MASP2):c.1827G>A (p.Arg609=) single nucleotide variant MASP2-related condition [RCV003976827] Chr1:11027119 [GRCh38]
Chr1:11087176 [GRCh37]
Chr1:1p36.22
likely benign
NM_006610.4(MASP2):c.1857T>G (p.Ala619=) single nucleotide variant MASP2-related condition [RCV003921639] Chr1:11027089 [GRCh38]
Chr1:11087146 [GRCh37]
Chr1:1p36.22
likely benign
NM_006610.4(MASP2):c.1689G>A (p.Arg563=) single nucleotide variant MASP2-related condition [RCV003909273] Chr1:11027257 [GRCh38]
Chr1:11087314 [GRCh37]
Chr1:1p36.22
likely benign
NM_006610.4(MASP2):c.1391G>C (p.Gly464Ala) single nucleotide variant MASP2-related condition [RCV003944736] Chr1:11027555 [GRCh38]
Chr1:11087612 [GRCh37]
Chr1:1p36.22
benign
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1949
Count of miRNA genes:883
Interacting mature miRNAs:1039
Transcripts:ENST00000240185, ENST00000315091, ENST00000439080, ENST00000472476, ENST00000473118, ENST00000473869, ENST00000476201, ENST00000477447, ENST00000480464, ENST00000496840
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH10991  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372239,142,615 - 239,142,767UniSTSGRCh37
GRCh37111,083,727 - 11,083,879UniSTSGRCh37
Build 36111,006,314 - 11,006,466RGDNCBI36
Celera2232,855,169 - 232,855,321UniSTS
Celera110,196,034 - 10,196,186RGD
Cytogenetic Map1p36.22UniSTS
Cytogenetic Map2q37.3UniSTS
HuRef2230,933,665 - 230,933,817UniSTS
HuRef110,235,402 - 10,235,554UniSTS
SHGC-74204  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37111,085,393 - 11,085,515UniSTSGRCh37
Build 36111,007,980 - 11,008,102RGDNCBI36
Celera110,197,705 - 10,197,827RGD
Cytogenetic Map1p36.22UniSTS
HuRef110,237,073 - 10,237,195UniSTS
TNG Radiation Hybrid Map16873.0UniSTS
GeneMap99-GB4 RH Map147.85UniSTS
Whitehead-RH Map154.3UniSTS
NCBI RH Map159.0UniSTS
WI-8757  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37111,083,925 - 11,084,033UniSTSGRCh37
Build 36111,006,512 - 11,006,620RGDNCBI36
Celera110,196,232 - 10,196,340RGD
Cytogenetic Map1p36.22UniSTS
HuRef110,235,600 - 10,235,708UniSTS
Whitehead-YAC Contig Map20 UniSTS
D1S1845E  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1p36.22UniSTS
HSC11D022  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1p36.22UniSTS
Whitehead-YAC Contig Map20 UniSTS
RH27226  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1p36.22UniSTS


Related Rat Strains
The following Strains have been annotated to TARDBP


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High 1
Medium 2439 2696 1725 624 1719 465 4356 2132 3699 417 1458 1613 175 1 1204 2787 5 2
Low 295 1 243 2 66 35 2 2 8 1 1
Below cutoff 38 3 17 9 135 11 84 31 34 17 41 87 4

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_008734 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_007375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017000863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017000864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017000865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017000866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017000867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017000868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007058558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007058559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007058560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007058561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007058562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007058563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007058564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008485970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008485971 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008485972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008485973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008485974 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008485975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008485976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008485977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008485978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008485979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008485980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF311304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK222754 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK295920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK299454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK312416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL045296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL050265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL109811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC001487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC059955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC071657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC095435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI464234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM716882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD703666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR533534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF434181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF434182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF434183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HB886813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HC091208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HC944222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ628633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ628634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ628635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ628636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ628637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U23731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000240185   ⟹   ENSP00000240185
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,012,654 - 11,025,492 (+)Ensembl
RefSeq Acc Id: ENST00000315091   ⟹   ENSP00000313129
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,013,716 - 11,024,183 (+)Ensembl
RefSeq Acc Id: ENST00000439080   ⟹   ENSP00000404666
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,012,653 - 11,022,858 (+)Ensembl
RefSeq Acc Id: ENST00000472476   ⟹   ENSP00000465080
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,012,654 - 11,022,176 (+)Ensembl
RefSeq Acc Id: ENST00000473118   ⟹   ENSP00000465240
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,012,344 - 11,020,489 (+)Ensembl
RefSeq Acc Id: ENST00000473869   ⟹   ENSP00000432132
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,013,716 - 11,025,019 (+)Ensembl
RefSeq Acc Id: ENST00000476201   ⟹   ENSP00000466842
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,012,654 - 11,020,589 (+)Ensembl
RefSeq Acc Id: ENST00000477447   ⟹   ENSP00000465888
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,020,587 - 11,025,207 (+)Ensembl
RefSeq Acc Id: ENST00000480464
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,023,929 - 11,025,492 (+)Ensembl
RefSeq Acc Id: ENST00000496840   ⟹   ENSP00000467020
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,023,198 - 11,025,739 (+)Ensembl
RefSeq Acc Id: ENST00000607145
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,029,659 - 11,030,528 (+)Ensembl
RefSeq Acc Id: ENST00000610369   ⟹   ENSP00000482559
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,018,853 - 11,024,043 (+)Ensembl
RefSeq Acc Id: ENST00000611008
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,022,818 - 11,025,492 (+)Ensembl
RefSeq Acc Id: ENST00000611136   ⟹   ENSP00000481737
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,020,506 - 11,030,430 (+)Ensembl
RefSeq Acc Id: ENST00000611963   ⟹   ENSP00000481330
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,016,966 - 11,024,193 (+)Ensembl
RefSeq Acc Id: ENST00000612387
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,029,758 - 11,030,528 (+)Ensembl
RefSeq Acc Id: ENST00000612542   ⟹   ENSP00000478249
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,022,144 - 11,030,526 (+)Ensembl
RefSeq Acc Id: ENST00000613177
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,023,045 - 11,025,203 (+)Ensembl
RefSeq Acc Id: ENST00000613864
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,012,654 - 11,018,453 (+)Ensembl
RefSeq Acc Id: ENST00000614494   ⟹   ENSP00000482754
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,020,433 - 11,024,183 (+)Ensembl
RefSeq Acc Id: ENST00000614757   ⟹   ENSP00000481867
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,012,662 - 11,030,528 (+)Ensembl
RefSeq Acc Id: ENST00000616545   ⟹   ENSP00000484722
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,013,728 - 11,023,341 (+)Ensembl
RefSeq Acc Id: ENST00000617172   ⟹   ENSP00000479219
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,016,865 - 11,023,590 (+)Ensembl
RefSeq Acc Id: ENST00000617757
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,023,323 - 11,024,152 (+)Ensembl
RefSeq Acc Id: ENST00000618606
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,016,878 - 11,019,186 (+)Ensembl
RefSeq Acc Id: ENST00000619555   ⟹   ENSP00000479978
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,018,780 - 11,024,184 (+)Ensembl
RefSeq Acc Id: ENST00000620028
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,024,793 - 11,030,525 (+)Ensembl
RefSeq Acc Id: ENST00000620505   ⟹   ENSP00000479758
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,022,308 - 11,025,221 (+)Ensembl
RefSeq Acc Id: ENST00000620632   ⟹   ENSP00000480771
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,018,780 - 11,024,043 (+)Ensembl
RefSeq Acc Id: ENST00000621573   ⟹   ENSP00000477852
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,022,548 - 11,024,273 (+)Ensembl
RefSeq Acc Id: ENST00000621715   ⟹   ENSP00000480690
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,012,670 - 11,022,310 (+)Ensembl
RefSeq Acc Id: ENST00000621790   ⟹   ENSP00000482191
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,013,728 - 11,023,341 (+)Ensembl
RefSeq Acc Id: ENST00000622057   ⟹   ENSP00000481206
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,016,859 - 11,023,287 (+)Ensembl
RefSeq Acc Id: ENST00000622108   ⟹   ENSP00000480398
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,023,198 - 11,030,497 (+)Ensembl
RefSeq Acc Id: ENST00000629725   ⟹   ENSP00000486989
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,012,622 - 11,023,248 (+)Ensembl
RefSeq Acc Id: ENST00000638264   ⟹   ENSP00000491085
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,013,728 - 11,022,651 (+)Ensembl
RefSeq Acc Id: ENST00000639083   ⟹   ENSP00000491203
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,012,424 - 11,023,609 (+)Ensembl
RefSeq Acc Id: ENST00000639599   ⟹   ENSP00000492196
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,012,425 - 11,024,183 (+)Ensembl
RefSeq Acc Id: ENST00000649624   ⟹   ENSP00000497327
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl111,013,728 - 11,023,234 (+)Ensembl
RefSeq Acc Id: NM_007375   ⟹   NP_031401
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38111,012,654 - 11,025,492 (+)NCBI
GRCh37111,072,462 - 11,085,549 (+)NCBI
Build 36110,995,266 - 11,008,136 (+)NCBI Archive
HuRef110,224,341 - 10,237,229 (+)ENTREZGENE
CHM1_1111,060,321 - 11,073,209 (+)NCBI
T2T-CHM13v2.0110,553,914 - 10,566,770 (+)NCBI
Sequence:
RefSeq Acc Id: XR_007058558
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38111,012,654 - 11,025,492 (+)NCBI
RefSeq Acc Id: XR_007058559
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38111,012,654 - 11,025,492 (+)NCBI
RefSeq Acc Id: XR_007058560
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38111,012,654 - 11,030,528 (+)NCBI
RefSeq Acc Id: XR_007058561
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38111,012,654 - 11,025,492 (+)NCBI
RefSeq Acc Id: XR_007058562
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38111,012,654 - 11,030,528 (+)NCBI
RefSeq Acc Id: XR_007058563
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38111,012,654 - 11,030,528 (+)NCBI
RefSeq Acc Id: XR_007058564
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38111,012,654 - 11,030,528 (+)NCBI
RefSeq Acc Id: XR_008485970
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0110,553,914 - 10,571,805 (+)NCBI
RefSeq Acc Id: XR_008485971
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0110,553,914 - 10,571,805 (+)NCBI
RefSeq Acc Id: XR_008485972
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0110,553,914 - 10,571,805 (+)NCBI
RefSeq Acc Id: XR_008485973
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0110,553,914 - 10,571,805 (+)NCBI
RefSeq Acc Id: XR_008485974
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0110,553,914 - 10,566,770 (+)NCBI
RefSeq Acc Id: XR_008485975
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0110,553,914 - 10,566,770 (+)NCBI
RefSeq Acc Id: XR_008485976
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0110,553,914 - 10,571,805 (+)NCBI
RefSeq Acc Id: XR_008485977
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0110,553,914 - 10,566,770 (+)NCBI
RefSeq Acc Id: XR_008485978
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0110,553,914 - 10,571,805 (+)NCBI
RefSeq Acc Id: XR_008485979
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0110,553,914 - 10,571,805 (+)NCBI
RefSeq Acc Id: XR_008485980
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0110,553,914 - 10,571,805 (+)NCBI
Protein Sequences
Protein RefSeqs NP_031401 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA70033 (Get FASTA)   NCBI Sequence Viewer  
  AAG47782 (Get FASTA)   NCBI Sequence Viewer  
  AAH71657 (Get FASTA)   NCBI Sequence Viewer  
  AAH95435 (Get FASTA)   NCBI Sequence Viewer  
  ABO32290 (Get FASTA)   NCBI Sequence Viewer  
  ABO32291 (Get FASTA)   NCBI Sequence Viewer  
  ABO32292 (Get FASTA)   NCBI Sequence Viewer  
  AER93383 (Get FASTA)   NCBI Sequence Viewer  
  AER93384 (Get FASTA)   NCBI Sequence Viewer  
  AER93385 (Get FASTA)   NCBI Sequence Viewer  
  AER93386 (Get FASTA)   NCBI Sequence Viewer  
  AER93387 (Get FASTA)   NCBI Sequence Viewer  
  BAD96474 (Get FASTA)   NCBI Sequence Viewer  
  BAG35326 (Get FASTA)   NCBI Sequence Viewer  
  BAG58707 (Get FASTA)   NCBI Sequence Viewer  
  BAG61425 (Get FASTA)   NCBI Sequence Viewer  
  CAB43367 (Get FASTA)   NCBI Sequence Viewer  
  CAG38565 (Get FASTA)   NCBI Sequence Viewer  
  CBF67564 (Get FASTA)   NCBI Sequence Viewer  
  CBI68017 (Get FASTA)   NCBI Sequence Viewer  
  CBU92437 (Get FASTA)   NCBI Sequence Viewer  
  EAW71669 (Get FASTA)   NCBI Sequence Viewer  
  EAW71670 (Get FASTA)   NCBI Sequence Viewer  
  EAW71671 (Get FASTA)   NCBI Sequence Viewer  
  EAW71672 (Get FASTA)   NCBI Sequence Viewer  
  EAW71673 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000240185
  ENSP00000240185.4
  ENSP00000313129.3
  ENSP00000404666.3
  ENSP00000432132.1
  ENSP00000465080.1
  ENSP00000465240.1
  ENSP00000465888.2
  ENSP00000466842.2
  ENSP00000467020.1
  ENSP00000477852.1
  ENSP00000478249.1
  ENSP00000479219.1
  ENSP00000479758.1
  ENSP00000479978.1
  ENSP00000480398.1
  ENSP00000480690.1
  ENSP00000480771.1
  ENSP00000481206.1
  ENSP00000481330.1
  ENSP00000481737.1
  ENSP00000481867.1
  ENSP00000482191.1
  ENSP00000482559.1
  ENSP00000482754.1
  ENSP00000484722.1
  ENSP00000486989.1
  ENSP00000491203.1
  ENSP00000492196.1
  ENSP00000497327.1
GenBank Protein Q13148 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_031401   ⟸   NM_007375
- UniProtKB: Q6FI92 (UniProtKB/Swiss-Prot),   Q53H27 (UniProtKB/Swiss-Prot),   E2PU12 (UniProtKB/Swiss-Prot),   B4DJ45 (UniProtKB/Swiss-Prot),   B2R629 (UniProtKB/Swiss-Prot),   A4GUK6 (UniProtKB/Swiss-Prot),   A4GUK5 (UniProtKB/Swiss-Prot),   A4GUK4 (UniProtKB/Swiss-Prot),   Q96DJ0 (UniProtKB/Swiss-Prot),   Q13148 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSP00000480771   ⟸   ENST00000620632
RefSeq Acc Id: ENSP00000479758   ⟸   ENST00000620505
RefSeq Acc Id: ENSP00000465888   ⟸   ENST00000477447
RefSeq Acc Id: ENSP00000497327   ⟸   ENST00000649624
RefSeq Acc Id: ENSP00000480690   ⟸   ENST00000621715
RefSeq Acc Id: ENSP00000482191   ⟸   ENST00000621790
RefSeq Acc Id: ENSP00000477852   ⟸   ENST00000621573
RefSeq Acc Id: ENSP00000404666   ⟸   ENST00000439080
RefSeq Acc Id: ENSP00000240185   ⟸   ENST00000240185
RefSeq Acc Id: ENSP00000481206   ⟸   ENST00000622057
RefSeq Acc Id: ENSP00000480398   ⟸   ENST00000622108
RefSeq Acc Id: ENSP00000491085   ⟸   ENST00000638264
RefSeq Acc Id: ENSP00000482559   ⟸   ENST00000610369
RefSeq Acc Id: ENSP00000481737   ⟸   ENST00000611136
RefSeq Acc Id: ENSP00000491203   ⟸   ENST00000639083
RefSeq Acc Id: ENSP00000492196   ⟸   ENST00000639599
RefSeq Acc Id: ENSP00000481330   ⟸   ENST00000611963
RefSeq Acc Id: ENSP00000478249   ⟸   ENST00000612542
RefSeq Acc Id: ENSP00000481867   ⟸   ENST00000614757
RefSeq Acc Id: ENSP00000467020   ⟸   ENST00000496840
RefSeq Acc Id: ENSP00000482754   ⟸   ENST00000614494
RefSeq Acc Id: ENSP00000486989   ⟸   ENST00000629725
RefSeq Acc Id: ENSP00000484722   ⟸   ENST00000616545
RefSeq Acc Id: ENSP00000479219   ⟸   ENST00000617172
RefSeq Acc Id: ENSP00000313129   ⟸   ENST00000315091
RefSeq Acc Id: ENSP00000465080   ⟸   ENST00000472476
RefSeq Acc Id: ENSP00000479978   ⟸   ENST00000619555
RefSeq Acc Id: ENSP00000465240   ⟸   ENST00000473118
RefSeq Acc Id: ENSP00000432132   ⟸   ENST00000473869
RefSeq Acc Id: ENSP00000466842   ⟸   ENST00000476201
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q13148-F1-model_v2 AlphaFold Q13148 1-414 view protein structure

Promoters
RGD ID:6785201
Promoter ID:HG_KWN:645
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_2Hour,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000323644,   NM_007375,   OTTHUMT00000006066,   OTTHUMT00000006067,   OTTHUMT00000006068
Position:
Human AssemblyChrPosition (strand)Source
Build 36110,994,776 - 10,995,387 (+)MPROMDB
RGD ID:6785200
Promoter ID:HG_KWN:646
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell_12Hour,   HeLa_S3,   Jurkat,   Lymphoblastoid,   NB4
Transcripts:ENST00000315091,   OTTHUMT00000006064
Position:
Human AssemblyChrPosition (strand)Source
Build 36110,995,159 - 10,995,659 (+)MPROMDB
RGD ID:6852602
Promoter ID:EP74113
Type:initiation region
Name:HS_TARDBP
Description:TAR DNA binding protein.
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Mammalian gene collection (MGC) full-length cDNA cloning
Position:
Human AssemblyChrPosition (strand)Source
Build 36110,995,295 - 10,995,355EPD
RGD ID:6786969
Promoter ID:HG_KWN:649
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3,   Jurkat,   Lymphoblastoid
Transcripts:OTTHUMT00000006071
Position:
Human AssemblyChrPosition (strand)Source
Build 36111,007,039 - 11,007,539 (+)MPROMDB
RGD ID:6854054
Promoter ID:EPDNEW_H192
Type:initiation region
Name:TARDBP_3
Description:TAR DNA binding protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H193  EPDNEW_H194  EPDNEW_H195  EPDNEW_H196  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38111,012,327 - 11,012,387EPDNEW
RGD ID:6854056
Promoter ID:EPDNEW_H193
Type:initiation region
Name:TARDBP_1
Description:TAR DNA binding protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H192  EPDNEW_H194  EPDNEW_H195  EPDNEW_H196  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38111,012,659 - 11,012,719EPDNEW
RGD ID:6854058
Promoter ID:EPDNEW_H194
Type:initiation region
Name:TARDBP_5
Description:TAR DNA binding protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H192  EPDNEW_H193  EPDNEW_H195  EPDNEW_H196  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38111,013,801 - 11,013,861EPDNEW
RGD ID:6854060
Promoter ID:EPDNEW_H195
Type:initiation region
Name:TARDBP_2
Description:TAR DNA binding protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H192  EPDNEW_H193  EPDNEW_H194  EPDNEW_H196  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38111,022,664 - 11,022,724EPDNEW
RGD ID:6854062
Promoter ID:EPDNEW_H196
Type:initiation region
Name:TARDBP_4
Description:TAR DNA binding protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H192  EPDNEW_H193  EPDNEW_H194  EPDNEW_H195  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38111,023,334 - 11,023,394EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:11571 AgrOrtholog
COSMIC TARDBP COSMIC
Ensembl Genes ENSG00000120948 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSG00000277726 Ensembl
Ensembl Transcript ENST00000240185 ENTREZGENE
  ENST00000240185.8 UniProtKB/Swiss-Prot
  ENST00000315091.7 UniProtKB/TrEMBL
  ENST00000439080.6 UniProtKB/TrEMBL
  ENST00000472476.5 UniProtKB/TrEMBL
  ENST00000473118.5 UniProtKB/TrEMBL
  ENST00000473869.5 UniProtKB/TrEMBL
  ENST00000476201.5 UniProtKB/TrEMBL
  ENST00000477447.6 UniProtKB/TrEMBL
  ENST00000496840.1 UniProtKB/TrEMBL
  ENST00000610369.4 UniProtKB/TrEMBL
  ENST00000611136.4 UniProtKB/TrEMBL
  ENST00000611963.4 UniProtKB/TrEMBL
  ENST00000612542.1 UniProtKB/TrEMBL
  ENST00000614494.1 UniProtKB/TrEMBL
  ENST00000614757.4 UniProtKB/TrEMBL
  ENST00000616545.4 UniProtKB/TrEMBL
  ENST00000617172.4 UniProtKB/TrEMBL
  ENST00000619555.4 UniProtKB/TrEMBL
  ENST00000620505.1 UniProtKB/TrEMBL
  ENST00000620632.4 UniProtKB/TrEMBL
  ENST00000621573.1 UniProtKB/TrEMBL
  ENST00000621715.4 UniProtKB/TrEMBL
  ENST00000621790.4 UniProtKB/TrEMBL
  ENST00000622057.4 UniProtKB/TrEMBL
  ENST00000622108.1 UniProtKB/TrEMBL
  ENST00000629725.2 UniProtKB/TrEMBL
  ENST00000639083.1 UniProtKB/Swiss-Prot
  ENST00000639599.1 UniProtKB/TrEMBL
  ENST00000649624.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.70.330 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000120948 GTEx
  ENSG00000277726 GTEx
HGNC ID HGNC:11571 ENTREZGENE
Human Proteome Map TARDBP Human Proteome Map
InterPro Nucleotide-bd_a/b_plait_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RBD_domain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RRM_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TDP-43_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TDP43_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:23435 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 23435 ENTREZGENE
OMIM 605078 OMIM
PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TAR DNA-BINDING PROTEIN 43 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam RRM_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TDP-43_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TDP43_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA36336 PharmGKB
PROSITE RRM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART RRM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF54928 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A087WTG4_HUMAN UniProtKB/TrEMBL
  A0A087WTZ4_HUMAN UniProtKB/TrEMBL
  A0A087WV68_HUMAN UniProtKB/TrEMBL
  A0A087WVX6_HUMAN UniProtKB/TrEMBL
  A0A087WW61_HUMAN UniProtKB/TrEMBL
  A0A087WX29_HUMAN UniProtKB/TrEMBL
  A0A087WX67_HUMAN UniProtKB/TrEMBL
  A0A087WXQ5_HUMAN UniProtKB/TrEMBL
  A0A087WXV3_HUMAN UniProtKB/TrEMBL
  A0A087WYE7_HUMAN UniProtKB/TrEMBL
  A0A087WYY0_HUMAN UniProtKB/TrEMBL
  A0A087WZC9_HUMAN UniProtKB/TrEMBL
  A0A087WZM1_HUMAN UniProtKB/TrEMBL
  A0A087X260_HUMAN UniProtKB/TrEMBL
  A0A0A0MSV7_HUMAN UniProtKB/TrEMBL
  A0A0A0N0M3_HUMAN UniProtKB/TrEMBL
  A4GUK4 ENTREZGENE
  A4GUK5 ENTREZGENE
  A4GUK6 ENTREZGENE
  B1AKP7_HUMAN UniProtKB/TrEMBL
  B2R629 ENTREZGENE
  B4DJ45 ENTREZGENE
  E2PU12 ENTREZGENE
  G3V162_HUMAN UniProtKB/TrEMBL
  K7EJ99_HUMAN UniProtKB/TrEMBL
  K7EJM5_HUMAN UniProtKB/TrEMBL
  K7EL26_HUMAN UniProtKB/TrEMBL
  K7EN94_HUMAN UniProtKB/TrEMBL
  K7ENM9_HUMAN UniProtKB/TrEMBL
  Q13148 ENTREZGENE
  Q53H27 ENTREZGENE
  Q6FI92 ENTREZGENE
  Q96DJ0 ENTREZGENE
  Q9H256_HUMAN UniProtKB/TrEMBL
  TADBP_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary A4GUK4 UniProtKB/Swiss-Prot
  A4GUK5 UniProtKB/Swiss-Prot
  A4GUK6 UniProtKB/Swiss-Prot
  B2R629 UniProtKB/Swiss-Prot
  B4DJ45 UniProtKB/Swiss-Prot
  E2PU12 UniProtKB/Swiss-Prot
  Q53H27 UniProtKB/Swiss-Prot
  Q6FI92 UniProtKB/Swiss-Prot
  Q96DJ0 UniProtKB/Swiss-Prot