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Gene: SYNDIG1 (synapse differentiation inducing 1) Homo sapiens
Symbol: SYNDIG1
Name: synapse differentiation inducing 1
Description: Predicted to have glutamate receptor binding activity and protein homodimerization activity. Involved in positive regulation of synapse assembly. Localizes to the intracellular membrane-bounded organelle.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: C20orf39; dispanin subfamily C member 2; DSPC2; FLJ14220; IFITMD5; interferon induced transmembrane protein domain containing 5; synapse differentiation induced gene 1; synapse differentiation-inducing gene protein 1; TMEM90B; transmembrane protein 90B
Mus musculus (house mouse) : Syndig1 (synapse differentiation inducing 1)  MGI  Alliance
Rattus norvegicus (Norway rat) : Syndig1 (synapse differentiation inducing 1)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Syndig1 (synapse differentiation inducing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SYNDIG1 (synapse differentiation inducing 1)
Canis lupus familiaris (dog) : SYNDIG1 (synapse differentiation inducing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Syndig1 (synapse differentiation inducing 1)
Sus scrofa (pig) : SYNDIG1 (synapse differentiation inducing 1)
Chlorocebus sabaeus (African green monkey) : SYNDIG1 (synapse differentiation inducing 1)
Heterocephalus glaber (naked mole-rat) : Syndig1 (synapse differentiation inducing 1)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Human AssemblyChrPosition (strand)SourceGenome Browsers
GRCh38 Ensembl2024,469,629 - 24,666,616 (+)EnsemblGRCh38hg38GRCh38
GRCh382024,469,199 - 24,666,617 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh372024,449,835 - 24,647,253 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362024,397,835 - 24,595,167 (+)NCBINCBI36hg18NCBI36
Build 342024,397,834 - 24,595,167NCBI
Celera2024,524,151 - 24,721,487 (+)NCBI
Cytogenetic Map20p11.21NCBI
HuRef2024,405,607 - 24,604,629 (+)NCBIHuRef
CHM1_12024,450,308 - 24,648,495 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)

References - curated
References - uncurated


Comparative Map Data
Position Markers
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences
Clinical Variants

Additional Information

External Database Links
Nomenclature History
More on SYNDIG1
Alliance Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1321842
Created: 2005-01-12
Species: Homo sapiens
Last Modified: 2020-03-24
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.