Sh3bp2 (SH3-domain binding protein 2)

Gene: Sh3bp2 (SH3-domain binding protein 2) Mus musculus

Analyze

Symbol:

Sh3bp2

Name:

SH3-domain binding protein 2

RGD ID:

1321584

MGI Page

MGI

Description:

Enables SH3 domain binding activity. Predicted to be involved in signal transduction. Is expressed in brain and spinal cord. Used to study cherubism. Human ortholog(s) of this gene implicated in cherubism. Orthologous to human SH3BP2 (SH3 domain binding protein 2).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

3BP; 3BP-2; 3BP2; SH3 domain-binding protein 2

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SH3BP2 (SH3 domain binding protein 2)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Rattus norvegicus (Norway rat):	Sh3bp2 (SH3-domain binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Sh3bp2 (SH3 domain binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SH3BP2 (SH3 domain binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SH3BP2 (SH3 domain binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Sh3bp2 (SH3 domain binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SH3BP2 (SH3 domain binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SH3BP2 (SH3 domain binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Sh3bp2 (SH3 domain binding protein 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Sh3bp2 (SH3-domain binding protein 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	SH3BP2 (SH3 domain binding protein 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	sh3bp2 (SH3-domain binding protein 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid\|ZFIN)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	34,683,128 - 34,720,983 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	34,683,182 - 34,720,985 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	34,525,784 - 34,563,639 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	34,525,838 - 34,563,641 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	34,868,433 - 34,906,288 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	34,842,703 - 34,880,483 (+)	NCBI		MGSCv36	mm8
Celera	5	31,996,748 - 32,034,601 (+)	NCBI		Celera
Cytogenetic Map	5	B2	NCBI
cM Map	5	17.89	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

cherubism (IAGP,ISO)

Ellis-Van Creveld syndrome (ISO)

genetic disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (EXP)

1,1-dichloroethene (EXP)

1,2-dimethylhydrazine (EXP,ISO)

17alpha-ethynylestradiol (EXP)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (ISO)

2-hydroxypropanoic acid (ISO)

4,4'-diaminodiphenylmethane (EXP)

4,4'-sulfonyldiphenol (EXP)

6-propyl-2-thiouracil (ISO)

acrolein (ISO)

acrylamide (ISO)

aflatoxin B1 (EXP,ISO)

aldehydo-D-glucose (EXP)

all-trans-retinoic acid (ISO)

antirheumatic drug (ISO)

azoxystrobin (ISO)

benzene-1,2,4-triol (ISO)

benzo[a]pyrene (EXP,ISO)

Benzo[k]fluoranthene (EXP)

bisphenol A (ISO)

butanal (ISO)

C60 fullerene (ISO)

carbon nanotube (EXP)

cefaloridine (ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

copper(II) sulfate (ISO)

Cuprizon (ISO)

cyclosporin A (ISO)

D-glucose (EXP)

dicrotophos (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

endosulfan (ISO)

epoxiconazole (EXP)

fenthion (EXP)

flutamide (ISO)

FR900359 (ISO)

gentamycin (ISO)

glucose (EXP)

glyphosate (EXP,ISO)

hydroquinone (ISO)

imidacloprid (ISO)

inulin (EXP)

lead(0) (ISO)

leflunomide (ISO)

mercury atom (ISO)

mercury(0) (ISO)

methoxychlor (ISO)

ozone (ISO)

paclitaxel (ISO)

paracetamol (EXP,ISO)

perfluorononanoic acid (ISO)

perfluorooctane-1-sulfonic acid (EXP)

perfluorooctanoic acid (ISO)

phenobarbital (EXP)

pirinixic acid (EXP)

pregnenolone 16alpha-carbonitrile (EXP)

prothioconazole (ISO)

quercetin (ISO)

rac-lactic acid (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

tamoxifen (EXP)

tetrachloromethane (EXP)

thiabendazole (ISO)

titanium dioxide (EXP)

trovafloxacin (EXP)

urethane (ISO)

valproic acid (ISO)

vinclozolin (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

signal transduction (IEA)

Molecular Function

phosphotyrosine residue binding (ISO)

protein binding (IPI)

SH3 domain binding (IBA,IPI)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal B cell number (IAGP)

abnormal B cell physiology (IAGP)

abnormal bone ossification (IAGP)

abnormal bone structure (IAGP)

abnormal circulating cytokine level (IAGP)

abnormal compact bone morphology (IAGP)

abnormal craniofacial bone morphology (IAGP)

abnormal enzyme/coenzyme level (IAGP)

abnormal immune system organ morphology (IAGP)

abnormal interleukin-6 secretion (IAGP)

abnormal jaw morphology (IAGP)

abnormal long bone morphology (IAGP)

abnormal lymph node cell ratio (IAGP)

abnormal macrophage physiology (IAGP)

abnormal marginal zone B cell physiology (IAGP)

abnormal neurocranium morphology (IAGP)

abnormal osteoclast differentiation (IAGP)

abnormal osteoclast physiology (IAGP)

abnormal skeleton morphology (IAGP)

abnormal skeleton physiology (IAGP)

abnormal spleen marginal zone morphology (IAGP)

alveolar process atrophy (IAGP)

blepharitis (IAGP)

decreased B cell proliferation (IAGP)

decreased B-1 B cell number (IAGP)

decreased bone mineral density (IAGP)

decreased bone trabecula number (IAGP)

decreased IgA level (IAGP)

decreased IgG1 level (IAGP)

decreased IgG3 level (IAGP)

decreased IgM level (IAGP)

decreased immunoglobulin level (IAGP)

decreased osteoclast cell number (IAGP)

decreased pro-B cell number (IAGP)

decreased trabecular bone volume (IAGP)

decreased transitional stage B cell number (IAGP)

decreased tumor necrosis factor secretion (IAGP)

dermatitis (IAGP)

enlarged lymph nodes (IAGP)

head/neck swellings (IAGP)

impaired macrophage phagocytosis (IAGP)

increased B cell apoptosis (IAGP)

increased bone mass (IAGP)

increased bone mineral density (IAGP)

increased bone trabecula number (IAGP)

increased circulating aspartate transaminase level (IEA)

increased circulating interleukin-12 level (IAGP)

increased circulating interleukin-6 level (IAGP)

increased circulating tumor necrosis factor level (IAGP)

increased compact bone thickness (IAGP)

increased inflammatory response (IAGP)

increased marginal zone B cell number (IAGP)

increased monocyte cell number (IAGP)

increased osteoblast cell number (IAGP)

increased osteoclast cell number (IAGP)

increased pre-B cell number (IAGP)

increased spleen red pulp amount (IAGP)

increased susceptibility to bacterial infection (IAGP)

increased trabecular bone thickness (IAGP)

increased trabecular bone volume (IAGP)

increased tumor necrosis factor secretion (IAGP)

joint inflammation (IAGP)

liver inflammation (IAGP)

lung inflammation (IAGP)

lymph node inflammation (IAGP)

myositis (IAGP)

osteomyelitis (IAGP)

premature death (IAGP)

short tibia (IEA)

spinal cord inflammation (IAGP)

stomach inflammation (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	MGDs mouse GO annotations	MGD data from the GO Consortium
2.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
4.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
7.	Mutations in the gene encoding c-Abl-binding protein SH3BP2 cause cherubism.	Ueki Y, etal., Nat Genet. 2001 Jun;28(2):125-6.
8.	Database resources of the National Center for Biotechnology Information.	Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.

Additional References at PubMed

PMID:8438166	PMID:10349636	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12477932	PMID:12709437	PMID:16141072	PMID:16141073	PMID:16809760	PMID:17218256	PMID:17283041
PMID:18440306	PMID:18799693	PMID:18846253	PMID:19587764	PMID:20117257	PMID:20691350	PMID:21267068	PMID:21448930	PMID:21677750	PMID:21738685	PMID:21765218	PMID:21794028
PMID:21873635	PMID:22153076	PMID:22153077	PMID:22815290	PMID:22896635	PMID:24916406	PMID:24978678	PMID:25144740	PMID:25220465	PMID:25445458	PMID:25705883	PMID:25859222
PMID:27626380	PMID:27797343	PMID:28287403	PMID:28914985	PMID:29530719	PMID:30067970	PMID:31052273	PMID:31613396	PMID:32554809	PMID:33920631	PMID:35129602	PMID:35362478
PMID:38127456

Genomics

Comparative Map Data

Sh3bp2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	34,683,128 - 34,720,983 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	34,683,182 - 34,720,985 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	34,525,784 - 34,563,639 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	34,525,838 - 34,563,641 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	34,868,433 - 34,906,288 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	34,842,703 - 34,880,483 (+)	NCBI		MGSCv36	mm8
Celera	5	31,996,748 - 32,034,601 (+)	NCBI		Celera
Cytogenetic Map	5	B2	NCBI
cM Map	5	17.89	NCBI

SH3BP2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	2,793,085 - 2,841,096 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	2,793,071 - 2,841,098 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	4	2,794,812 - 2,842,823 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	2,790,339 - 2,810,712 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	4	2,857,545 - 2,877,920	NCBI
Celera	4	2,706,072 - 2,754,024 (+)	NCBI		Celera
Cytogenetic Map	4	p16.3	NCBI
HuRef	4	2,733,534 - 2,781,278 (+)	NCBI		HuRef
CHM1_1	4	2,792,693 - 2,840,796 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	4	2,791,852 - 2,839,552 (+)	NCBI		T2T-CHM13v2.0

Sh3bp2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	80,400,685 - 80,437,887 (-)	NCBI		GRCr8
mRatBN7.2	14	76,176,097 - 76,213,300 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	76,176,101 - 76,213,251 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	14	80,628,679 - 80,665,764 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	81,869,326 - 81,906,411 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	78,314,567 - 78,351,655 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	81,435,445 - 81,473,013 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	81,435,449 - 81,472,952 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	82,122,929 - 82,160,479 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	81,818,728 - 81,855,875 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	14	81,822,156 - 81,855,721 (-)	NCBI
Celera	14	75,100,620 - 75,137,766 (-)	NCBI		Celera
Cytogenetic Map	14	q21	NCBI

Sh3bp2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955514	1,712,793 - 1,730,002 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955514	1,700,889 - 1,730,002 (+)	NCBI	ChiLan1.0	ChiLan1.0

SH3BP2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	3,129,178 - 3,172,613 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	3,065,091 - 3,108,538 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	2,936,051 - 2,982,062 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	2,838,521 - 2,882,265 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	2,857,249 - 2,882,263 (+)	Ensembl	panpan1.1		panPan2

SH3BP2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	61,454,945 - 61,488,951 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	61,358,162 - 61,474,830 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	64,038,628 - 64,072,602 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	61,930,906 - 61,964,895 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	61,930,906 - 61,964,886 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	61,422,146 - 61,456,112 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	61,627,161 - 61,661,130 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	61,986,786 - 62,020,764 (-)	NCBI		UU_Cfam_GSD_1.0

Sh3bp2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405285	67,072,693 - 67,106,061 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936477	20,773,016 - 20,807,722 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936477	20,774,386 - 20,794,958 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SH3BP2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	1,583,193 - 1,619,037 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	1,583,169 - 1,619,038 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	1,164,569 - 1,201,283 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SH3BP2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	27	45,919,717 - 45,961,355 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	27	45,920,171 - 45,942,425 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666051	2,275,298 - 2,323,644 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Sh3bp2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624755	24,941,813 - 24,957,004 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624755	24,942,542 - 24,968,384 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Sh3bp2
999 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	2036
Count of miRNA genes:	511
Interacting mature miRNAs:	639
Transcripts:	ENSMUST00000067638, ENSMUST00000101316, ENSMUST00000118545, ENSMUST00000125817, ENSMUST00000138912, ENSMUST00000153750, ENSMUST00000179943
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10401122	Pgia41_m	proteoglycan induced arthritis 41 (mouse)			Not determined		5	823144	34823280	Mouse
15039371	Nmrs21_m	NAFLD-associated magnetic resonance shift 21 (mouse)					5	3504823	37504823	Mouse
1301806	Actd2_m	activity-distance traveled 2 (mouse)			Not determined		5	5384520	39384652	Mouse
4141207	Imrfq1_m	immune response to Factor IX QTL 1 (mouse)			Not determined		5	8124117	42124239	Mouse
1301693	Sle6_m	systemic lupus erythematosus susceptibility 6 (mouse)			Not determined		5	8890693	87841837	Mouse
1357478	Kdnw1_m	kidney weight 1 (mouse)			Not determined		5	8915949	40529869	Mouse
14696730	Kidlq1_m	kidney weight, left QTL 1 (mouse)					5	13563152	47563152	Mouse
1301685	Estq2_m	estradiol regulated response QTL 2 (mouse)			Not determined		5	15634084	49634190	Mouse
1300719	Iba5_m	induction of brown adipocytes 5 (mouse)			Not determined		5	20686993	54687134	Mouse
1301776	Skts3_m	skin tumor susceptibility 3 (mouse)			Not determined		5	21667295	55667403	Mouse
11537368	Hmtb10_m	hemostasis and thrombosis 10 (mouse)					5	22100823	54500318	Mouse
11537367	Hmtb11_m	hemostasis and thrombosis 11 (mouse)					5	22100823	64806579	Mouse
11341716	Rvfs3_m	Rift Valley fever susceptibility 3 (mouse)					5	26441234	138455402	Mouse
1300701	Cd8ts1_m	CD8 T cell subset 1 (mouse)			Not determined		5	27215348	61215451	Mouse
1301555	Alcp10_m	alcohol preference locus 10 (mouse)			Not determined		5	31024275	65024480	Mouse
1301403	Alcp9_m	alcohol preference locus 9 (mouse)			Not determined		5	31024275	65024480	Mouse
11353827	Hplq1_m	hot plate latency 1 (mouse)					5	31570458	65570458	Mouse
4140990	Lgq6_m	late growth QTL 6 (mouse)			Not determined			32133234	100777931	Mouse
4141219	W10q16_m	weight 10 weeks QTL 16 (mouse)			Not determined			32133234	100777931	Mouse
10043995	Hbnr9_m	Heligmosomoides bakeri nematode resistance 9 (mouse)			Not determined		5	33488667	67488876	Mouse

Markers in Region

D5Jcs82

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	34,550,205 - 34,550,370	UniSTS	GRCm38
MGSCv37	5	34,892,854 - 34,893,019	UniSTS	GRCm37
Celera	5	32,021,169 - 32,021,332	UniSTS
Cytogenetic Map	5	B2	UniSTS
cM Map	5		UniSTS

L14543

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	5	34,563,132 - 34,563,277	UniSTS	GRCm38
MGSCv37	5	34,905,781 - 34,905,926	UniSTS	GRCm37
Celera	5	32,034,094 - 32,034,239	UniSTS
Cytogenetic Map	5	B2	UniSTS
Whitehead/MRC_RH	5	451.65	UniSTS

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001145858	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001145859	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_011893	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006503954	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006503955	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC115695	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK089455	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK143548	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK150265	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK155103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK155898	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK155970	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK156912	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC010198	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC085497	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466524	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	L14543	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000067638 ⟹ ENSMUSP00000070890

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	34,683,190 - 34,720,985 (+)	Ensembl
GRCm38.p6 Ensembl	5	34,525,846 - 34,563,641 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000101316 ⟹ ENSMUSP00000098874

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	34,700,709 - 34,720,969 (+)	Ensembl
GRCm38.p6 Ensembl	5	34,543,365 - 34,563,625 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000118545 ⟹ ENSMUSP00000112554

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	34,706,920 - 34,720,969 (+)	Ensembl
GRCm38.p6 Ensembl	5	34,549,576 - 34,563,625 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000125817 ⟹ ENSMUSP00000123177

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	34,683,182 - 34,709,044 (+)	Ensembl
GRCm38.p6 Ensembl	5	34,525,838 - 34,551,700 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000138912 ⟹ ENSMUSP00000114416

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	34,700,709 - 34,710,090 (+)	Ensembl
GRCm38.p6 Ensembl	5	34,543,365 - 34,552,746 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000153750

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	34,700,709 - 34,715,065 (+)	Ensembl
GRCm38.p6 Ensembl	5	34,543,365 - 34,557,721 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000179943 ⟹ ENSMUSP00000136671

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	34,707,032 - 34,720,982 (+)	Ensembl
GRCm38.p6 Ensembl	5	34,549,688 - 34,563,638 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000202745

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	34,708,889 - 34,710,136 (+)	Ensembl
GRCm38.p6 Ensembl	5	34,551,545 - 34,552,792 (+)	Ensembl

RefSeq Acc Id:

NM_001145858 ⟹ NP_001139330

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	34,700,709 - 34,720,983 (+)	NCBI
GRCm38	5	34,543,365 - 34,563,639 (+)	NCBI
MGSCv37	5	34,868,433 - 34,906,288 (+)	RGD
Celera	5	31,996,748 - 32,034,601 (+)	RGD
cM Map	5		ENTREZGENE

Sequence:

show sequence

TTGGCCCCAGCTTCCCCCACCCCGTGAAGCCTACTGCACTGCTCTGCAGGCTCGGCAGTGCTGG
GAACAGCCAGGGGCCTTGAGGATCTCATGTCTGGGGGATGCAGGTTGCAGTCCCTCCTCATAGC
CCCTGAGCTGAATAGCCTTTCCGGATTTAAGGACACCTGTCCCCAGCAGGTCACAGGAAGTTGT
ACCATGTGTTGGGTCAGTGCCATGAGCTTCATGGCGGCTGAGGAGATGCAGTGGCCTGTCCCCA
TGAAGGCCATTGGTGCCCAGAATTTGCTGACCATGCCTGGTGGTGTGGCGAAGGCTGGTTACCT
GCATAAGAAGGGTGGCACCCAACTGCAGCTGCTCAAATGGCCCCTCCGCTTTGTGATCATCCAC
AAGCGCTGCATCTACTACTTCAAGAGCAGCACATCTGCCTCCCCACAGGGTGCCTTCTCACTGA
GTGGCTACAACAGAGTGATGCGAGCAGCTGAGGAGACCACGTCCAACAATGTCTTCCCATTCAA
GATCATTCACATCAGCAAGAAGCACCGAACATGGTTCTTCTCAGCGTCCTCTGAGGATGAGCGC
AAGAGCTGGATGGCCTTGCTACGCAGGGAAATTGGCCACTTCCATGAGAAGAAGGAACTACCTC
TAGACACCAGCGACTCTAGCTCAGACACGGACAGCTTCTATGGTGCAGTTGAGCGACCTATAGA
TATCAGCCTGTCTTCATATCCCATGGACAATGAAGATTACGAACATGAAGATGAGGACGACTCG
TACCTGGAGCCTGATTCCCCGGGGCCCATGAAGCTTGAAGATGCCCTGACCTATCCACCAGCCT
ACCCACCACCCCCTGTGCCTGTACCTCGGAAGCCAGCCTTCTCTGACTTGCCCCGTGCCCACTC
GTTCACCTCTAAAAGTCCAAGTCCCTTACTGCCACCCCCACCTCCTAAGCGAGGCCTTCCAGAC
ACTGGCTCTGCCCCTGAGGATGCTAAGGACGCATTGGGCCTGAGGCGAGTAGAGCCTGGCCTCA
GGGTGCCTGCCACCCCTCGGAGGATGAGTGACCCCCCAATGAGCAATGTACCCACCGTGCCCAA
CCTCCGGAAACATCCTTGCTTCCGGGACAGTGTGAATCCCGGCCTAGAACCCTGGACCCCTGGC
CATGGGACTAGCTCTGTCTCCAGCTCTACCACCATGGCCGTTGCCACCTCTAGGAACTGTGACA
AACTCAAGTCATTCCACCTGTCTTCCCGAGGGCCACCCACATCTGAGCCCCCACCCGTGCCTGC
TAATAAGCCCAAGTTCCTGAAGATAGCTGAAGAACCTTCCCCGAGGGAGGCAGCCAAGTTTGCA
CCTGTGCCCCCTGTGGCCCCCAGGCCTCCTGTGCAGAAGATGCCCATGCCTGAGGCTACTGTTC
GGCCTGCAGTGCTGCCTAGACCAGAGAACACACCTCTTCCTCACCTCCAGCGATCCCCCCCTGA
TGGACAGAGTTTCAGGGGCTTCTCCTTTGAAAAGGCCCGCCAGCCCTCACAGGCTGACACTGGC
GAGGAGGACTCAGATGAAGACTATGAGAAGGTGCCGCTGCCTAACTCGGTGTTTGTCAACACGA
CAGAGTCCTGCGAGGTGGAAAGGTTGTTCAAAGCTACGGACCCCCGTGGAGAGCCTCAGGATGG
GCTGTATTGCATTCGGAACTCCTCTACCAAGTCAGGGAAGGTTTTGGTCGTGTGGGATGAATCT
TCTAACAAAGTGAGGAATTATCGCATCTTTGAAAAGGATTCTAAGTTCTACCTGGAAGGTGAGG
TTCTGTTTGCCAGTGTGGGCAGCATGGTGGAGCACTACCACACCCATGTGCTGCCCAGCCATCA
GAGCCTGTTGCTGCGGCACCCATACGGCTACGCTGGGCCCAGGTGACATCCATTCCACACAGCT
GTTGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCTGCATGGGAA
GATGAACAGGAATGGGCTTGACATCAGACCTCATCGACATGACACCTAGCCGCAGTGAGCAGGC
TGGGTTCCAGCTGGAGCAGGCCACAACTACTAAAGGAGTGGCTGGATGACTTGGCCCATCCAGC
CATTCCATGACCCATCTCTCAAGAACCCAGGTCTGGTGACTAAGTGCTGCCTGGGCTTCGAGGG
CACATGATCAGGTCGCTATAGCATACCTACTCTGTAGTGGGCTGGGACCAAGCAAGGCTGGGTT
ACTTGAAGCCTTGTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCTAGGAGGGACCA
TTGCCTCTCAATAAATCAGAGATGACCTTTGTCTCAATGACCAGGGTTTGATTGGCACAGAGTG
GGTAGCAGGCTCTACTGAGCACCACCAATGTCCAGGTAGAGAGCTACTGAGAGCAGCCCTAATG
TGTGGTCTTTAGTGTTCAGGGCACAGGCTGCTGAGTGACCTCACTGGAAGAGATAGCTAAATAA
TGGATCAGGATCCACCTGGATCTGTCAATCTTGGCTGGAGCCTCAATTTGAAAGCCCCAATTAG
CAATTATTGAGCGACTATGTAACTGGCCTGGTACTGGGGCTGGTTGCTGGCTGTGAGCAGCCCC
TAGTCCAGCTTGGTCAAGCTTACTCTAGAGCAGGTCAGTGAGTATCAGGTGCTGCTGGAGGTGC
TGTGGTCTGGGAAGCCACATGGGGGATCTGGGAGCTTGGAATCCAGTGTGTGTGGGGGCAGGGA
AGGGGTGGGAGGTCGGGGAGGTTCCAGTAAGACTTCTTACAGATGACCTGGCCAGAGTGAAGTG
GGACAGGCCAAGGATGGGTGGGGACAGTGGCATCCACGTACCCCCAAGTAGTTTGGTGATCCCA
ATTGGTCCAGGCCACACCCCTGGCACAGCCGTCTAGACTGGACTTTTTCTGTGAAAATAAATTC
ATTTGGAGGTCAGGGCAGCCAGAGACCTTGGCACTATCTGATTTCATTGCACTTTATGTTAGAA
AATAAAGTTTCTTTTTAAATTTTATTATTTTTATGCAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001145859 ⟹ NP_001139331

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	34,706,920 - 34,720,983 (+)	NCBI
GRCm38	5	34,549,576 - 34,563,639 (+)	NCBI
MGSCv37	5	34,868,433 - 34,906,288 (+)	RGD
Celera	5	31,996,748 - 32,034,601 (+)	RGD
cM Map	5		ENTREZGENE

Sequence:

show sequence

ACTACCGCCCGCGAGGGGAGGAGCCAGGGGCAGCTCCGGCCTGGGGCTCTACGAGCTATGGCGG
GCTCAGGGTCGCGGCCGCGGAGCTGGGGCTGGCGAGAGACAGGCTCCAGGGACGAGGCTGCGGC
CGGTGGGCCCACCTCGGGACCCTGTCGCTGCTCACAGGGAAGGCGGGCGCTGGCCGCCCCCCGG
AAGCCGGCTGTGCCCGCCGCGTGGACACCCTTCATGGCGGCTGAGGAGATGCAGTGGCCTGTCC
CCATGAAGGCCATTGGTGCCCAGAATTTGCTGACCATGCCTGGTGGTGTGGCGAAGGCTGGTTA
CCTGCATAAGAAGGGTGGCACCCAACTGCAGCTGCTCAAATGGCCCCTCCGCTTTGTGATCATC
CACAAGCGCTGCATCTACTACTTCAAGAGCAGCACATCTGCCTCCCCACAGGGTGCCTTCTCAC
TGAGTGGCTACAACAGAGTGATGCGAGCAGCTGAGGAGACCACGTCCAACAATGTCTTCCCATT
CAAGATCATTCACATCAGCAAGAAGCACCGAACATGGTTCTTCTCAGCGTCCTCTGAGGATGAG
CGCAAGAGCTGGATGGCCTTGCTACGCAGGGAAATTGGCCACTTCCATGAGAAGAAGGAACTAC
CTCTAGACACCAGCGACTCTAGCTCAGACACGGACAGCTTCTATGGTGCAGTTGAGCGACCTAT
AGATATCAGCCTGTCTTCATATCCCATGGACAATGAAGATTACGAACATGAAGATGAGGACGAC
TCGTACCTGGAGCCTGATTCCCCGGGGCCCATGAAGCTTGAAGATGCCCTGACCTATCCACCAG
CCTACCCACCACCCCCTGTGCCTGTACCTCGGAAGCCAGCCTTCTCTGACTTGCCCCGTGCCCA
CTCGTTCACCTCTAAAAGTCCAAGTCCCTTACTGCCACCCCCACCTCCTAAGCGAGGCCTTCCA
GACACTGGCTCTGCCCCTGAGGATGCTAAGGACGCATTGGGCCTGAGGCGAGTAGAGCCTGGCC
TCAGGGTGCCTGCCACCCCTCGGAGGATGAGTGACCCCCCAATGAGCAATGTACCCACCGTGCC
CAACCTCCGGAAACATCCTTGCTTCCGGGACAGTGTGAATCCCGGCCTAGAACCCTGGACCCCT
GGCCATGGGACTAGCTCTGTCTCCAGCTCTACCACCATGGCCGTTGCCACCTCTAGGAACTGTG
ACAAACTCAAGTCATTCCACCTGTCTTCCCGAGGGCCACCCACATCTGAGCCCCCACCCGTGCC
TGCTAATAAGCCCAAGTTCCTGAAGATAGCTGAAGAACCTTCCCCGAGGGAGGCAGCCAAGTTT
GCACCTGTGCCCCCTGTGGCCCCCAGGCCTCCTGTGCAGAAGATGCCCATGCCTGAGGCTACTG
TTCGGCCTGCAGTGCTGCCTAGACCAGAGAACACACCTCTTCCTCACCTCCAGCGATCCCCCCC
TGATGGACAGAGTTTCAGGGGCTTCTCCTTTGAAAAGGCCCGCCAGCCCTCACAGGCTGACACT
GGCGAGGAGGACTCAGATGAAGACTATGAGAAGGTGCCGCTGCCTAACTCGGTGTTTGTCAACA
CGACAGAGTCCTGCGAGGTGGAAAGGTTGTTCAAAGCTACGGACCCCCGTGGAGAGCCTCAGGA
TGGGCTGTATTGCATTCGGAACTCCTCTACCAAGTCAGGGAAGGTTTTGGTCGTGTGGGATGAA
TCTTCTAACAAAGTGAGGAATTATCGCATCTTTGAAAAGGATTCTAAGTTCTACCTGGAAGGTG
AGGTTCTGTTTGCCAGTGTGGGCAGCATGGTGGAGCACTACCACACCCATGTGCTGCCCAGCCA
TCAGAGCCTGTTGCTGCGGCACCCATACGGCTACGCTGGGCCCAGGTGACATCCATTCCACACA
GCTGTTGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCTGCATGG
GAAGATGAACAGGAATGGGCTTGACATCAGACCTCATCGACATGACACCTAGCCGCAGTGAGCA
GGCTGGGTTCCAGCTGGAGCAGGCCACAACTACTAAAGGAGTGGCTGGATGACTTGGCCCATCC
AGCCATTCCATGACCCATCTCTCAAGAACCCAGGTCTGGTGACTAAGTGCTGCCTGGGCTTCGA
GGGCACATGATCAGGTCGCTATAGCATACCTACTCTGTAGTGGGCTGGGACCAAGCAAGGCTGG
GTTACTTGAAGCCTTGTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCTAGGAGGGA
CCATTGCCTCTCAATAAATCAGAGATGACCTTTGTCTCAATGACCAGGGTTTGATTGGCACAGA
GTGGGTAGCAGGCTCTACTGAGCACCACCAATGTCCAGGTAGAGAGCTACTGAGAGCAGCCCTA
ATGTGTGGTCTTTAGTGTTCAGGGCACAGGCTGCTGAGTGACCTCACTGGAAGAGATAGCTAAA
TAATGGATCAGGATCCACCTGGATCTGTCAATCTTGGCTGGAGCCTCAATTTGAAAGCCCCAAT
TAGCAATTATTGAGCGACTATGTAACTGGCCTGGTACTGGGGCTGGTTGCTGGCTGTGAGCAGC
CCCTAGTCCAGCTTGGTCAAGCTTACTCTAGAGCAGGTCAGTGAGTATCAGGTGCTGCTGGAGG
TGCTGTGGTCTGGGAAGCCACATGGGGGATCTGGGAGCTTGGAATCCAGTGTGTGTGGGGGCAG
GGAAGGGGTGGGAGGTCGGGGAGGTTCCAGTAAGACTTCTTACAGATGACCTGGCCAGAGTGAA
GTGGGACAGGCCAAGGATGGGTGGGGACAGTGGCATCCACGTACCCCCAAGTAGTTTGGTGATC
CCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTCTAGACTGGACTTTTTCTGTGAAAATAAA
TTCATTTGGAGGTCAGGGCAGCCAGAGACCTTGGCACTATCTGATTTCATTGCACTTTATGTTA
GAAAATAAAGTTTCTTTTTAAATTTTATTATTTTTATGCAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_011893 ⟹ NP_036023

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	34,683,128 - 34,720,983 (+)	NCBI
GRCm38	5	34,525,784 - 34,563,639 (+)	ENTREZGENE
MGSCv37	5	34,868,433 - 34,906,288 (+)	RGD
Celera	5	31,996,748 - 32,034,601 (+)	RGD
cM Map	5		ENTREZGENE

Sequence:

show sequence

GATTGGAGGCGGGGCCTGCATCGGGGTGCCTGGCTGCGGGCCTCACTGGCCGCAAAGCGGAGCA
ACAGAGCAGGGATCCGCCTCCCGGACGCAGGGTCCCTGGGCTGGGAACCGGCGGCTTCATGGCG
GCTGAGGAGATGCAGTGGCCTGTCCCCATGAAGGCCATTGGTGCCCAGAATTTGCTGACCATGC
CTGGTGGTGTGGCGAAGGCTGGTTACCTGCATAAGAAGGGTGGCACCCAACTGCAGCTGCTCAA
ATGGCCCCTCCGCTTTGTGATCATCCACAAGCGCTGCATCTACTACTTCAAGAGCAGCACATCT
GCCTCCCCACAGGGTGCCTTCTCACTGAGTGGCTACAACAGAGTGATGCGAGCAGCTGAGGAGA
CCACGTCCAACAATGTCTTCCCATTCAAGATCATTCACATCAGCAAGAAGCACCGAACATGGTT
CTTCTCAGCGTCCTCTGAGGATGAGCGCAAGAGCTGGATGGCCTTGCTACGCAGGGAAATTGGC
CACTTCCATGAGAAGAAGGAACTACCTCTAGACACCAGCGACTCTAGCTCAGACACGGACAGCT
TCTATGGTGCAGTTGAGCGACCTATAGATATCAGCCTGTCTTCATATCCCATGGACAATGAAGA
TTACGAACATGAAGATGAGGACGACTCGTACCTGGAGCCTGATTCCCCGGGGCCCATGAAGCTT
GAAGATGCCCTGACCTATCCACCAGCCTACCCACCACCCCCTGTGCCTGTACCTCGGAAGCCAG
CCTTCTCTGACTTGCCCCGTGCCCACTCGTTCACCTCTAAAAGTCCAAGTCCCTTACTGCCACC
CCCACCTCCTAAGCGAGGCCTTCCAGACACTGGCTCTGCCCCTGAGGATGCTAAGGACGCATTG
GGCCTGAGGCGAGTAGAGCCTGGCCTCAGGGTGCCTGCCACCCCTCGGAGGATGAGTGACCCCC
CAATGAGCAATGTACCCACCGTGCCCAACCTCCGGAAACATCCTTGCTTCCGGGACAGTGTGAA
TCCCGGCCTAGAACCCTGGACCCCTGGCCATGGGACTAGCTCTGTCTCCAGCTCTACCACCATG
GCCGTTGCCACCTCTAGGAACTGTGACAAACTCAAGTCATTCCACCTGTCTTCCCGAGGGCCAC
CCACATCTGAGCCCCCACCCGTGCCTGCTAATAAGCCCAAGTTCCTGAAGATAGCTGAAGAACC
TTCCCCGAGGGAGGCAGCCAAGTTTGCACCTGTGCCCCCTGTGGCCCCCAGGCCTCCTGTGCAG
AAGATGCCCATGCCTGAGGCTACTGTTCGGCCTGCAGTGCTGCCTAGACCAGAGAACACACCTC
TTCCTCACCTCCAGCGATCCCCCCCTGATGGACAGAGTTTCAGGGGCTTCTCCTTTGAAAAGGC
CCGCCAGCCCTCACAGGCTGACACTGGCGAGGAGGACTCAGATGAAGACTATGAGAAGGTGCCG
CTGCCTAACTCGGTGTTTGTCAACACGACAGAGTCCTGCGAGGTGGAAAGGTTGTTCAAAGCTA
CGGACCCCCGTGGAGAGCCTCAGGATGGGCTGTATTGCATTCGGAACTCCTCTACCAAGTCAGG
GAAGGTTTTGGTCGTGTGGGATGAATCTTCTAACAAAGTGAGGAATTATCGCATCTTTGAAAAG
GATTCTAAGTTCTACCTGGAAGGTGAGGTTCTGTTTGCCAGTGTGGGCAGCATGGTGGAGCACT
ACCACACCCATGTGCTGCCCAGCCATCAGAGCCTGTTGCTGCGGCACCCATACGGCTACGCTGG
GCCCAGGTGACATCCATTCCACACAGCTGTTGGGTGGAAGCAGCCCCGGAGCCACAGCTCTGCC
ACAAAGATGGAGACCAGCTGCATGGGAAGATGAACAGGAATGGGCTTGACATCAGACCTCATCG
ACATGACACCTAGCCGCAGTGAGCAGGCTGGGTTCCAGCTGGAGCAGGCCACAACTACTAAAGG
AGTGGCTGGATGACTTGGCCCATCCAGCCATTCCATGACCCATCTCTCAAGAACCCAGGTCTGG
TGACTAAGTGCTGCCTGGGCTTCGAGGGCACATGATCAGGTCGCTATAGCATACCTACTCTGTA
GTGGGCTGGGACCAAGCAAGGCTGGGTTACTTGAAGCCTTGTCCTAGGACCCATAGGAATGCTA
AGACATAGGAATGCTCTAGGAGGGACCATTGCCTCTCAATAAATCAGAGATGACCTTTGTCTCA
ATGACCAGGGTTTGATTGGCACAGAGTGGGTAGCAGGCTCTACTGAGCACCACCAATGTCCAGG
TAGAGAGCTACTGAGAGCAGCCCTAATGTGTGGTCTTTAGTGTTCAGGGCACAGGCTGCTGAGT
GACCTCACTGGAAGAGATAGCTAAATAATGGATCAGGATCCACCTGGATCTGTCAATCTTGGCT
GGAGCCTCAATTTGAAAGCCCCAATTAGCAATTATTGAGCGACTATGTAACTGGCCTGGTACTG
GGGCTGGTTGCTGGCTGTGAGCAGCCCCTAGTCCAGCTTGGTCAAGCTTACTCTAGAGCAGGTC
AGTGAGTATCAGGTGCTGCTGGAGGTGCTGTGGTCTGGGAAGCCACATGGGGGATCTGGGAGCT
TGGAATCCAGTGTGTGTGGGGGCAGGGAAGGGGTGGGAGGTCGGGGAGGTTCCAGTAAGACTTC
TTACAGATGACCTGGCCAGAGTGAAGTGGGACAGGCCAAGGATGGGTGGGGACAGTGGCATCCA
CGTACCCCCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCGTCTAG
ACTGGACTTTTTCTGTGAAAATAAATTCATTTGGAGGTCAGGGCAGCCAGAGACCTTGGCACTA
TCTGATTTCATTGCACTTTATGTTAGAAAATAAAGTTTCTTTTTAAATTTTATTATTTTTATGC
AAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006503954 ⟹ XP_006504017

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	34,694,231 - 34,720,970 (+)	NCBI
GRCm38	5	34,536,941 - 34,563,626 (+)	NCBI

Sequence:

show sequence

CCACAGTTATTAGTAGATTTTGCCCCTGACTCTATTCCTATGGACTTCAGAGGATCAGGAGAAG
CTTGGGAGCAAAGGCTTCATGGCGGCTGAGGAGATGCAGTGGCCTGTCCCCATGAAGGCCATTG
GTGCCCAGAATTTGCTGACCATGCCTGGTGGTGTGGCGAAGGCTGGTTACCTGCATAAGAAGGG
TGGCACCCAACTGCAGCTGCTCAAATGGCCCCTCCGCTTTGTGATCATCCACAAGCGCTGCATC
TACTACTTCAAGAGCAGCACATCTGCCTCCCCACAGGGTGCCTTCTCACTGAGTGGCTACAACA
GAGTGATGCGAGCAGCTGAGGAGACCACGTCCAACAATGTCTTCCCATTCAAGATCATTCACAT
CAGCAAGAAGCACCGAACATGGTTCTTCTCAGCGTCCTCTGAGGATGAGCGCAAGAGCTGGATG
GCCTTGCTACGCAGGGAAATTGGCCACTTCCATGAGAAGAAGGAACTACCTCTAGACACCAGCG
ACTCTAGCTCAGACACGGACAGCTTCTATGGTGCAGTTGAGCGACCTATAGATATCAGCCTGTC
TTCATATCCCATGGACAATGAAGATTACGAACATGAAGATGAGGACGACTCGTACCTGGAGCCT
GATTCCCCGGGGCCCATGAAGCTTGAAGATGCCCTGACCTATCCACCAGCCTACCCACCACCCC
CTGTGCCTGTACCTCGGAAGCCAGCCTTCTCTGACTTGCCCCGTGCCCACTCGTTCACCTCTAA
AAGTCCAAGTCCCTTACTGCCACCCCCACCTCCTAAGCGAGGCCTTCCAGACACTGGCTCTGCC
CCTGAGGATGCTAAGGACGCATTGGGCCTGAGGCGAGTAGAGCCTGGCCTCAGGGTGCCTGCCA
CCCCTCGGAGGATGAGTGACCCCCCAATGAGCAATGTACCCACCGTGCCCAACCTCCGGAAACA
TCCTTGCTTCCGGGACAGTGTGAATCCCGGCCTAGAACCCTGGACCCCTGGCCATGGGACTAGC
TCTGTCTCCAGCTCTACCACCATGGCCGTTGCCACCTCTAGGAACTGTGACAAACTCAAGTCAT
TCCACCTGTCTTCCCGAGGGCCACCCACATCTGAGCCCCCACCCGTGCCTGCTAATAAGCCCAA
GTTCCTGAAGATAGCTGAAGAACCTTCCCCGAGGGAGGCAGCCAAGTTTGCACCTGTGCCCCCT
GTGGCCCCCAGGCCTCCTGTGCAGAAGATGCCCATGCCTGAGGCTACTGTTCGGCCTGCAGTGC
TGCCTAGACCAGAGAACACACCTCTTCCTCACCTCCAGCGATCCCCCCCTGATGGACAGAGTTT
CAGGGGCTTCTCCTTTGAAAAGGCCCGCCAGCCCTCACAGGCTGACACTGGCGAGGAGGACTCA
GATGAAGACTATGAGAAGGTGCCGCTGCCTAACTCGGTGTTTGTCAACACGACAGAGTCCTGCG
AGGTGGAAAGGTTGTTCAAAGCTACGGACCCCCGTGGAGAGCCTCAGGATGGGCTGTATTGCAT
TCGGAACTCCTCTACCAAGTCAGGGAAGGTTTTGGTCGTGTGGGATGAATCTTCTAACAAAGTG
AGGAATTATCGCATCTTTGAAAAGGATTCTAAGTTCTACCTGGAAGGTGAGGTTCTGTTTGCCA
GTGTGGGCAGCATGGTGGAGCACTACCACACCCATGTGCTGCCCAGCCATCAGAGCCTGTTGCT
GCGGCACCCATACGGCTACGCTGGGCCCAGGTGACATCCATTCCACACAGCTGTTGGGTGGAAG
CAGCCCCGGAGCCACAGCTCTGCCACAAAGATGGAGACCAGCTGCATGGGAAGATGAACAGGAA
TGGGCTTGACATCAGACCTCATCGACATGACACCTAGCCGCAGTGAGCAGGCTGGGTTCCAGCT
GGAGCAGGCCACAACTACTAAAGGAGTGGCTGGATGACTTGGCCCATCCAGCCATTCCATGACC
CATCTCTCAAGAACCCAGGTCTGGTGACTAAGTGCTGCCTGGGCTTCGAGGGCACATGATCAGG
TCGCTATAGCATACCTACTCTGTAGTGGGCTGGGACCAAGCAAGGCTGGGTTACTTGAAGCCTT
GTCCTAGGACCCATAGGAATGCTAAGACATAGGAATGCTCTAGGAGGGACCATTGCCTCTCAAT
AAATCAGAGATGACCTTTGTCTCAATGACCAGGGTTTGATTGGCACAGAGTGGGTAGCAGGCTC
TACTGAGCACCACCAATGTCCAGGTAGAGAGCTACTGAGAGCAGCCCTAATGTGTGGTCTTTAG
TGTTCAGGGCACAGGCTGCTGAGTGACCTCACTGGAAGAGATAGCTAAATAATGGATCAGGATC
CACCTGGATCTGTCAATCTTGGCTGGAGCCTCAATTTGAAAGCCCCAATTAGCAATTATTGAGC
GACTATGTAACTGGCCTGGTACTGGGGCTGGTTGCTGGCTGTGAGCAGCCCCTAGTCCAGCTTG
GTCAAGCTTACTCTAGAGCAGGTCAGTGAGTATCAGGTGCTGCTGGAGGTGCTGTGGTCTGGGA
AGCCACATGGGGGATCTGGGAGCTTGGAATCCAGTGTGTGTGGGGGCAGGGAAGGGGTGGGAGG
TCGGGGAGGTTCCAGTAAGACTTCTTACAGATGACCTGGCCAGAGTGAAGTGGGACAGGCCAAG
GATGGGTGGGGACAGTGGCATCCACGTACCCCCAAGTAGTTTGGTGATCCCAATTGGTCCAGGC
CACACCCCTGGCACAGCCGTCTAGACTGGACTTTTTCTGTGAAAATAAATTCATTTGGAGGTCA
GGGCAGCCAGAGACCTTGGCACTATCTGATTTCATTGCACTTTATGTTAGAAAATAAAGTTTCT
TTTTAAATTTTA

hide sequence

RefSeq Acc Id:

XM_006503955 ⟹ XP_006504018

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	34,701,576 - 34,720,970 (+)	NCBI
GRCm38	5	34,544,232 - 34,563,626 (+)	NCBI

Sequence:

show sequence

GATTCTGAGAAGAGGAAGGAAGAAAGAGAAACTAAGAGGGAAGAGCTTGTGAGATCTTCTTCAT
GGCGGCTGAGGAGATGCAGTGGCCTGTCCCCATGAAGGCCATTGGTGCCCAGAATTTGCTGACC
ATGCCTGGTGGTGTGGCGAAGGCTGGTTACCTGCATAAGAAGGGTGGCACCCAACTGCAGCTGC
TCAAATGGCCCCTCCGCTTTGTGATCATCCACAAGCGCTGCATCTACTACTTCAAGAGCAGCAC
ATCTGCCTCCCCACAGGGTGCCTTCTCACTGAGTGGCTACAACAGAGTGATGCGAGCAGCTGAG
GAGACCACGTCCAACAATGTCTTCCCATTCAAGATCATTCACATCAGCAAGAAGCACCGAACAT
GGTTCTTCTCAGCGTCCTCTGAGGATGAGCGCAAGAGCTGGATGGCCTTGCTACGCAGGGAAAT
TGGCCACTTCCATGAGAAGAAGGAACTACCTCTAGACACCAGCGACTCTAGCTCAGACACGGAC
AGCTTCTATGGTGCAGTTGAGCGACCTATAGATATCAGCCTGTCTTCATATCCCATGGACAATG
AAGATTACGAACATGAAGATGAGGACGACTCGTACCTGGAGCCTGATTCCCCGGGGCCCATGAA
GCTTGAAGATGCCCTGACCTATCCACCAGCCTACCCACCACCCCCTGTGCCTGTACCTCGGAAG
CCAGCCTTCTCTGACTTGCCCCGTGCCCACTCGTTCACCTCTAAAAGTCCAAGTCCCTTACTGC
CACCCCCACCTCCTAAGCGAGGCCTTCCAGACACTGGCTCTGCCCCTGAGGATGCTAAGGACGC
ATTGGGCCTGAGGCGAGTAGAGCCTGGCCTCAGGGTGCCTGCCACCCCTCGGAGGATGAGTGAC
CCCCCAATGAGCAATGTACCCACCGTGCCCAACCTCCGGAAACATCCTTGCTTCCGGGACAGTG
TGAATCCCGGCCTAGAACCCTGGACCCCTGGCCATGGGACTAGCTCTGTCTCCAGCTCTACCAC
CATGGCCGTTGCCACCTCTAGGAACTGTGACAAACTCAAGTCATTCCACCTGTCTTCCCGAGGG
CCACCCACATCTGAGCCCCCACCCGTGCCTGCTAATAAGCCCAAGTTCCTGAAGATAGCTGAAG
AACCTTCCCCGAGGGAGGCAGCCAAGTTTGCACCTGTGCCCCCTGTGGCCCCCAGGCCTCCTGT
GCAGAAGATGCCCATGCCTGAGGCTACTGTTCGGCCTGCAGTGCTGCCTAGACCAGAGAACACA
CCTCTTCCTCACCTCCAGCGATCCCCCCCTGATGGACAGAGTTTCAGGGGCTTCTCCTTTGAAA
AGGCCCGCCAGCCCTCACAGGCTGACACTGGCGAGGAGGACTCAGATGAAGACTATGAGAAGGT
GCCGCTGCCTAACTCGGTGTTTGTCAACACGACAGAGTCCTGCGAGGTGGAAAGGTTGTTCAAA
GCTACGGACCCCCGTGGAGAGCCTCAGGATGGGCTGTATTGCATTCGGAACTCCTCTACCAAGT
CAGGGAAGGTTTTGGTCGTGTGGGATGAATCTTCTAACAAAGTGAGGAATTATCGCATCTTTGA
AAAGGATTCTAAGTTCTACCTGGAAGGTGAGGTTCTGTTTGCCAGTGTGGGCAGCATGGTGGAG
CACTACCACACCCATGTGCTGCCCAGCCATCAGAGCCTGTTGCTGCGGCACCCATACGGCTACG
CTGGGCCCAGGTGACATCCATTCCACACAGCTGTTGGGTGGAAGCAGCCCCGGAGCCACAGCTC
TGCCACAAAGATGGAGACCAGCTGCATGGGAAGATGAACAGGAATGGGCTTGACATCAGACCTC
ATCGACATGACACCTAGCCGCAGTGAGCAGGCTGGGTTCCAGCTGGAGCAGGCCACAACTACTA
AAGGAGTGGCTGGATGACTTGGCCCATCCAGCCATTCCATGACCCATCTCTCAAGAACCCAGGT
CTGGTGACTAAGTGCTGCCTGGGCTTCGAGGGCACATGATCAGGTCGCTATAGCATACCTACTC
TGTAGTGGGCTGGGACCAAGCAAGGCTGGGTTACTTGAAGCCTTGTCCTAGGACCCATAGGAAT
GCTAAGACATAGGAATGCTCTAGGAGGGACCATTGCCTCTCAATAAATCAGAGATGACCTTTGT
CTCAATGACCAGGGTTTGATTGGCACAGAGTGGGTAGCAGGCTCTACTGAGCACCACCAATGTC
CAGGTAGAGAGCTACTGAGAGCAGCCCTAATGTGTGGTCTTTAGTGTTCAGGGCACAGGCTGCT
GAGTGACCTCACTGGAAGAGATAGCTAAATAATGGATCAGGATCCACCTGGATCTGTCAATCTT
GGCTGGAGCCTCAATTTGAAAGCCCCAATTAGCAATTATTGAGCGACTATGTAACTGGCCTGGT
ACTGGGGCTGGTTGCTGGCTGTGAGCAGCCCCTAGTCCAGCTTGGTCAAGCTTACTCTAGAGCA
GGTCAGTGAGTATCAGGTGCTGCTGGAGGTGCTGTGGTCTGGGAAGCCACATGGGGGATCTGGG
AGCTTGGAATCCAGTGTGTGTGGGGGCAGGGAAGGGGTGGGAGGTCGGGGAGGTTCCAGTAAGA
CTTCTTACAGATGACCTGGCCAGAGTGAAGTGGGACAGGCCAAGGATGGGTGGGGACAGTGGCA
TCCACGTACCCCCAAGTAGTTTGGTGATCCCAATTGGTCCAGGCCACACCCCTGGCACAGCCGT
CTAGACTGGACTTTTTCTGTGAAAATAAATTCATTTGGAGGTCAGGGCAGCCAGAGACCTTGGC
ACTATCTGATTTCATTGCACTTTATGTTAGAAAATAAAGTTTCTTTTTAAATTTTA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001139330	(Get FASTA)	NCBI Sequence Viewer
	NP_001139331	(Get FASTA)	NCBI Sequence Viewer
	NP_036023	(Get FASTA)	NCBI Sequence Viewer
	XP_006504017	(Get FASTA)	NCBI Sequence Viewer
	XP_006504018	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAA37121	(Get FASTA)	NCBI Sequence Viewer
	AAH10198	(Get FASTA)	NCBI Sequence Viewer
	AAH85497	(Get FASTA)	NCBI Sequence Viewer
	BAC40891	(Get FASTA)	NCBI Sequence Viewer
	BAE29422	(Get FASTA)	NCBI Sequence Viewer
	BAE33048	(Get FASTA)	NCBI Sequence Viewer
	BAE33490	(Get FASTA)	NCBI Sequence Viewer
	BAE33528	(Get FASTA)	NCBI Sequence Viewer
	BAE33894	(Get FASTA)	NCBI Sequence Viewer
	EDL37456	(Get FASTA)	NCBI Sequence Viewer
	EDL37457	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000070890
	ENSMUSP00000070890.8
	ENSMUSP00000098874
	ENSMUSP00000098874.4
	ENSMUSP00000112554
	ENSMUSP00000112554.2
	ENSMUSP00000114416.2
	ENSMUSP00000123177.2
	ENSMUSP00000136671
	ENSMUSP00000136671.2
GenBank Protein	Q06649	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_036023 ⟸ NM_011893
- Peptide Label:	isoform a
- UniProtKB:	Q5U3L0 (UniProtKB/TrEMBL), Q8C220 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAEEMQWPVPMKAIGAQNLLTMPGGVAKAGYLHKKGGTQLQLLKWPLRFVIIHKRCIYYFKSS TSASPQGAFSLSGYNRVMRAAEETTSNNVFPFKIIHISKKHRTWFFSASSEDERKSWMALLRRE IGHFHEKKELPLDTSDSSSDTDSFYGAVERPIDISLSSYPMDNEDYEHEDEDDSYLEPDSPGPM KLEDALTYPPAYPPPPVPVPRKPAFSDLPRAHSFTSKSPSPLLPPPPPKRGLPDTGSAPEDAKD ALGLRRVEPGLRVPATPRRMSDPPMSNVPTVPNLRKHPCFRDSVNPGLEPWTPGHGTSSVSSST TMAVATSRNCDKLKSFHLSSRGPPTSEPPPVPANKPKFLKIAEEPSPREAAKFAPVPPVAPRPP VQKMPMPEATVRPAVLPRPENTPLPHLQRSPPDGQSFRGFSFEKARQPSQADTGEEDSDEDYEK VPLPNSVFVNTTESCEVERLFKATDPRGEPQDGLYCIRNSSTKSGKVLVVWDESSNKVRNYRIF EKDSKFYLEGEVLFASVGSMVEHYHTHVLPSHQSLLLRHPYGYAGPR hide sequence

RefSeq Acc Id:	NP_001139330 ⟸ NM_001145858
- Peptide Label:	isoform c
- UniProtKB:	Q3UD40 (UniProtKB/TrEMBL), Q3U1H0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSGGCRLQSLLIAPELNSLSGFKDTCPQQVTGSCTMCWVSAMSFMAAEEMQWPVPMKAIGAQNL LTMPGGVAKAGYLHKKGGTQLQLLKWPLRFVIIHKRCIYYFKSSTSASPQGAFSLSGYNRVMRA AEETTSNNVFPFKIIHISKKHRTWFFSASSEDERKSWMALLRREIGHFHEKKELPLDTSDSSSD TDSFYGAVERPIDISLSSYPMDNEDYEHEDEDDSYLEPDSPGPMKLEDALTYPPAYPPPPVPVP RKPAFSDLPRAHSFTSKSPSPLLPPPPPKRGLPDTGSAPEDAKDALGLRRVEPGLRVPATPRRM SDPPMSNVPTVPNLRKHPCFRDSVNPGLEPWTPGHGTSSVSSSTTMAVATSRNCDKLKSFHLSS RGPPTSEPPPVPANKPKFLKIAEEPSPREAAKFAPVPPVAPRPPVQKMPMPEATVRPAVLPRPE NTPLPHLQRSPPDGQSFRGFSFEKARQPSQADTGEEDSDEDYEKVPLPNSVFVNTTESCEVERL FKATDPRGEPQDGLYCIRNSSTKSGKVLVVWDESSNKVRNYRIFEKDSKFYLEGEVLFASVGSM VEHYHTHVLPSHQSLLLRHPYGYAGPR hide sequence

RefSeq Acc Id:	NP_001139331 ⟸ NM_001145859
- Peptide Label:	isoform b
- UniProtKB:	E9QJU7 (UniProtKB/TrEMBL), Q8C220 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAGSGSRPRSWGWRETGSRDEAAAGGPTSGPCRCSQGRRALAAPRKPAVPAAWTPFMAAEEMQW PVPMKAIGAQNLLTMPGGVAKAGYLHKKGGTQLQLLKWPLRFVIIHKRCIYYFKSSTSASPQGA FSLSGYNRVMRAAEETTSNNVFPFKIIHISKKHRTWFFSASSEDERKSWMALLRREIGHFHEKK ELPLDTSDSSSDTDSFYGAVERPIDISLSSYPMDNEDYEHEDEDDSYLEPDSPGPMKLEDALTY PPAYPPPPVPVPRKPAFSDLPRAHSFTSKSPSPLLPPPPPKRGLPDTGSAPEDAKDALGLRRVE PGLRVPATPRRMSDPPMSNVPTVPNLRKHPCFRDSVNPGLEPWTPGHGTSSVSSSTTMAVATSR NCDKLKSFHLSSRGPPTSEPPPVPANKPKFLKIAEEPSPREAAKFAPVPPVAPRPPVQKMPMPE ATVRPAVLPRPENTPLPHLQRSPPDGQSFRGFSFEKARQPSQADTGEEDSDEDYEKVPLPNSVF VNTTESCEVERLFKATDPRGEPQDGLYCIRNSSTKSGKVLVVWDESSNKVRNYRIFEKDSKFYL EGEVLFASVGSMVEHYHTHVLPSHQSLLLRHPYGYAGPR hide sequence

RefSeq Acc Id:	XP_006504017 ⟸ XM_006503954
- Peptide Label:	isoform X1
- UniProtKB:	Q5U3L0 (UniProtKB/TrEMBL), Q8C220 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAEEMQWPVPMKAIGAQNLLTMPGGVAKAGYLHKKGGTQLQLLKWPLRFVIIHKRCIYYFKSS TSASPQGAFSLSGYNRVMRAAEETTSNNVFPFKIIHISKKHRTWFFSASSEDERKSWMALLRRE IGHFHEKKELPLDTSDSSSDTDSFYGAVERPIDISLSSYPMDNEDYEHEDEDDSYLEPDSPGPM KLEDALTYPPAYPPPPVPVPRKPAFSDLPRAHSFTSKSPSPLLPPPPPKRGLPDTGSAPEDAKD ALGLRRVEPGLRVPATPRRMSDPPMSNVPTVPNLRKHPCFRDSVNPGLEPWTPGHGTSSVSSST TMAVATSRNCDKLKSFHLSSRGPPTSEPPPVPANKPKFLKIAEEPSPREAAKFAPVPPVAPRPP VQKMPMPEATVRPAVLPRPENTPLPHLQRSPPDGQSFRGFSFEKARQPSQADTGEEDSDEDYEK VPLPNSVFVNTTESCEVERLFKATDPRGEPQDGLYCIRNSSTKSGKVLVVWDESSNKVRNYRIF EKDSKFYLEGEVLFASVGSMVEHYHTHVLPSHQSLLLRHPYGYAGPR hide sequence

RefSeq Acc Id:	XP_006504018 ⟸ XM_006503955
- Peptide Label:	isoform X1
- UniProtKB:	Q5U3L0 (UniProtKB/TrEMBL), Q8C220 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAEEMQWPVPMKAIGAQNLLTMPGGVAKAGYLHKKGGTQLQLLKWPLRFVIIHKRCIYYFKSS TSASPQGAFSLSGYNRVMRAAEETTSNNVFPFKIIHISKKHRTWFFSASSEDERKSWMALLRRE IGHFHEKKELPLDTSDSSSDTDSFYGAVERPIDISLSSYPMDNEDYEHEDEDDSYLEPDSPGPM KLEDALTYPPAYPPPPVPVPRKPAFSDLPRAHSFTSKSPSPLLPPPPPKRGLPDTGSAPEDAKD ALGLRRVEPGLRVPATPRRMSDPPMSNVPTVPNLRKHPCFRDSVNPGLEPWTPGHGTSSVSSST TMAVATSRNCDKLKSFHLSSRGPPTSEPPPVPANKPKFLKIAEEPSPREAAKFAPVPPVAPRPP VQKMPMPEATVRPAVLPRPENTPLPHLQRSPPDGQSFRGFSFEKARQPSQADTGEEDSDEDYEK VPLPNSVFVNTTESCEVERLFKATDPRGEPQDGLYCIRNSSTKSGKVLVVWDESSNKVRNYRIF EKDSKFYLEGEVLFASVGSMVEHYHTHVLPSHQSLLLRHPYGYAGPR hide sequence

RefSeq Acc Id:

ENSMUSP00000123177 ⟸ ENSMUST00000125817

RefSeq Acc Id:

ENSMUSP00000114416 ⟸ ENSMUST00000138912

RefSeq Acc Id:

ENSMUSP00000112554 ⟸ ENSMUST00000118545

RefSeq Acc Id:

ENSMUSP00000070890 ⟸ ENSMUST00000067638

RefSeq Acc Id:

ENSMUSP00000136671 ⟸ ENSMUST00000179943

RefSeq Acc Id:

ENSMUSP00000098874 ⟸ ENSMUST00000101316

Protein Domains

PH SH2

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q06649-F1-model_v2	AlphaFold	Q06649	1-559	view protein structure

Promoters

RGD ID:

6886468

Promoter ID:

EPDNEW_M6685

Type:

initiation region

Name:

Sh3bp2_3

Description:

Mus musculus SH3-domain binding protein 2 , transcript variant2, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M6686 EPDNEW_M6687 EPDNEW_M6688

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	5	34,525,837 - 34,525,897	EPDNEW

RGD ID:

6886470

Promoter ID:

EPDNEW_M6686

Type:

single initiation site

Name:

Sh3bp2_1

Description:

Mus musculus SH3-domain binding protein 2 , transcript variant2, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M6685 EPDNEW_M6687 EPDNEW_M6688

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	5	34,530,651 - 34,530,711	EPDNEW

RGD ID:

6886472

Promoter ID:

EPDNEW_M6687

Type:

initiation region

Name:

Sh3bp2_2

Description:

Mus musculus SH3-domain binding protein 2 , transcript variant2, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M6685 EPDNEW_M6686 EPDNEW_M6688

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	5	34,543,421 - 34,543,481	EPDNEW

RGD ID:

6886474

Promoter ID:

EPDNEW_M6688

Type:

initiation region

Name:

Sh3bp2_4

Description:

Mus musculus SH3-domain binding protein 2 , transcript variant2, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M6685 EPDNEW_M6686 EPDNEW_M6687

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	5	34,549,601 - 34,549,661	EPDNEW

RGD ID:

6838339

Promoter ID:

MM_KWN:41968

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Liver, Lung, MEF_B6, Spleen

Transcripts:

NM_011893, OTTMUST00000066135

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	5	34,868,384 - 34,868,884 (+)	MPROMDB

RGD ID:

6838340

Promoter ID:

MM_KWN:41969

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Spleen

Transcripts:

NM_001145858, OTTMUST00000066136, OTTMUST00000066674

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	5	34,885,056 - 34,886,057 (+)	MPROMDB

RGD ID:

6838333

Promoter ID:

MM_KWN:41970

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Lung, Spleen

Transcripts:

NM_001145859

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	5	34,891,306 - 34,892,647 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1346349	AgrOrtholog
Ensembl Genes	ENSMUSG00000054520	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000067638	ENTREZGENE
	ENSMUST00000067638.14	UniProtKB/TrEMBL
	ENSMUST00000101316	ENTREZGENE
	ENSMUST00000101316.10	UniProtKB/TrEMBL
	ENSMUST00000118545	ENTREZGENE
	ENSMUST00000118545.8	UniProtKB/TrEMBL
	ENSMUST00000125817.8	UniProtKB/TrEMBL
	ENSMUST00000138912.8	UniProtKB/TrEMBL
	ENSMUST00000179943	ENTREZGENE
	ENSMUST00000179943.3	UniProtKB/TrEMBL
Gene3D-CATH	2.30.29.30	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	3.30.505.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	PH-like_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PH_domain	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH2_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH3BP2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH3BP2_SH2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:24055	UniProtKB/TrEMBL
MGD	MGI:1346349	ENTREZGENE
NCBI Gene	24055	ENTREZGENE
PANTHER	PTHR15126	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH3 DOMAIN-BINDING PROTEIN 2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	PF00169	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Sh3bp2	PhenoGen
PROSITE	PH_DOMAIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	SH2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SM00233	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	PH domain-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF55550	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	3BP2_MOUSE	UniProtKB/Swiss-Prot
	D3Z107_MOUSE	UniProtKB/TrEMBL
	D6RDU0_MOUSE	UniProtKB/TrEMBL
	E9QJU7	ENTREZGENE, UniProtKB/TrEMBL
	Q06649	ENTREZGENE
	Q3U0G0_MOUSE	UniProtKB/TrEMBL
	Q3U1H0	ENTREZGENE, UniProtKB/TrEMBL
	Q3UD40	ENTREZGENE, UniProtKB/TrEMBL
	Q5U3L0	ENTREZGENE, UniProtKB/TrEMBL
	Q8C220	ENTREZGENE, UniProtKB/TrEMBL
	Q91Z52_MOUSE	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

Mammalian Phenotype

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