Gemin5 (gem nuclear organelle associated protein 5) - Rat Genome Database
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Gene: Gemin5 (gem nuclear organelle associated protein 5) Mus musculus
Analyze
Symbol: Gemin5
Name: gem nuclear organelle associated protein 5
RGD ID: 1321353
MGI Page MGI
Description: Is expressed in heart ventricle. Orthologous to human GEMIN5 (gem nuclear organelle associated protein 5); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AA407055; AA407208; AI451603; BB194447; C330013N08; gem (nuclear organelle) associated protein 5; gem-associated protein 5
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391158,010,827 - 58,059,378 (-)NCBIGRCm39mm39
GRCm39 Ensembl1158,010,828 - 58,059,365 (-)Ensembl
GRCm381158,120,001 - 58,168,554 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1158,120,002 - 58,168,539 (-)EnsemblGRCm38mm10GRCm38
MGSCv371157,933,503 - 57,982,041 (-)NCBIGRCm37mm9NCBIm37
MGSCv361157,937,485 - 57,984,668 (-)NCBImm8
Celera1162,874,539 - 62,922,743 (-)NCBICelera
Cytogenetic Map11B1.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11544199   PMID:12477932   PMID:12520002   PMID:14610273   PMID:15449545   PMID:15741177   PMID:15782199  
PMID:16141072   PMID:16141073   PMID:18799693   PMID:25911097   PMID:26449520   PMID:30196744   PMID:31366290   PMID:32098917   PMID:32325033  


Genomics

Comparative Map Data
Gemin5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391158,010,827 - 58,059,378 (-)NCBIGRCm39mm39
GRCm39 Ensembl1158,010,828 - 58,059,365 (-)Ensembl
GRCm381158,120,001 - 58,168,554 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1158,120,002 - 58,168,539 (-)EnsemblGRCm38mm10GRCm38
MGSCv371157,933,503 - 57,982,041 (-)NCBIGRCm37mm9NCBIm37
MGSCv361157,937,485 - 57,984,668 (-)NCBImm8
Celera1162,874,539 - 62,922,743 (-)NCBICelera
Cytogenetic Map11B1.3NCBI
GEMIN5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl5154,887,411 - 154,938,211 (-)EnsemblGRCh38hg38GRCh38
GRCh385154,887,411 - 154,938,211 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh375154,266,971 - 154,317,771 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365154,247,169 - 154,297,964 (-)NCBINCBI36hg18NCBI36
Build 345154,247,962 - 154,297,886NCBI
Celera5150,343,913 - 150,394,636 (-)NCBI
Cytogenetic Map5q33.2NCBI
HuRef5149,408,827 - 149,459,559 (-)NCBIHuRef
CHM1_15153,699,395 - 153,750,170 (-)NCBICHM1_1
Gemin5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21042,295,729 - 42,342,902 (-)NCBI
Rnor_6.0 Ensembl1043,554,046 - 43,599,232 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01043,552,260 - 43,599,241 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01043,344,664 - 43,392,988 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41043,754,719 - 43,796,361 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1041,587,419 - 41,632,698 (-)NCBICelera
Cytogenetic Map10q22NCBI
Gemin5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554089,134,191 - 9,178,980 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554089,136,490 - 9,179,087 (-)NCBIChiLan1.0ChiLan1.0
GEMIN5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.15156,284,947 - 156,335,833 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5156,285,679 - 156,335,750 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v05150,290,809 - 150,342,124 (-)NCBIMhudiblu_PPA_v0panPan3
GEMIN5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl454,894,784 - 54,934,986 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1454,894,747 - 54,934,869 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Gemin5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365157,923,113 - 7,971,507 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GEMIN5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1668,279,254 - 68,329,846 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11668,279,221 - 68,330,029 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21674,198,955 - 74,246,727 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GEMIN5
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12357,333,907 - 57,383,814 (-)NCBI
ChlSab1.1 Ensembl2357,332,805 - 57,383,802 (-)Ensembl
Gemin5
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473334,379,585 - 34,426,437 (+)NCBI

Position Markers
BB194447  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381158,120,095 - 58,120,218UniSTSGRCm38
MGSCv371157,933,597 - 57,933,720UniSTSGRCm37
Celera1162,874,633 - 62,874,756UniSTS
Cytogenetic Map11B1.3UniSTS
Whitehead/MRC_RH11762.97UniSTS
AI451603  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381158,121,164 - 58,121,243UniSTSGRCm38
MGSCv371157,934,666 - 57,934,745UniSTSGRCm37
Celera1162,875,700 - 62,875,779UniSTS
Cytogenetic Map11B1.3UniSTS
Whitehead/MRC_RH11763.1UniSTS
RH124556  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381158,121,046 - 58,121,195UniSTSGRCm38
MGSCv371157,934,548 - 57,934,697UniSTSGRCm37
Celera1162,875,582 - 62,875,731UniSTS
Cytogenetic Map11B1.3UniSTS
RH125659  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381158,121,019 - 58,121,268UniSTSGRCm38
MGSCv371157,934,521 - 57,934,770UniSTSGRCm37
Cytogenetic Map11B1.3UniSTS
Whitehead/MRC_RH11781.22UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27226798Scvln18_msacral vertebrae length 2, 16 week (mouse)11330000060800000Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11330000063000000Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11330000072800000Mouse
13208559Wght10_mweight 10 (mouse)11400000089000000Mouse
13208558Lgth12_mbody length 12 (mouse)11400000095000000Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11693027789128908Mouse
27226738Metcl11_mmetatarsal-calcaneal length 11, 10 week (mouse)11890000061500000Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111160000068600000Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111180000066100000Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1231863768609504Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111231863768609504Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111231863768609504Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1231863768609504Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1231863768609504Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111231863768609504Mouse
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1231863768609504Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1231863768609504Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1231863768609504Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111231863768609504Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111231863768609504Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111231863769794121Mouse
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111710617567187585Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111783196668609504Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1917420497007000Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112185736495990405Mouse
10044006Hbnr13_mHeligmosomoides bakeri nematode resistance 13 (mouse)Not determined112588179959881914Mouse
1357844Si5lq5_mserum IGFBP-5 level QTL 5 (mouse)Not determined112827504662275149Mouse
13524848Ppiq7_mprepulse inhibition QTL 7 (mouse)112867832062678320Mouse
1301426Desp2_mdespair 2 (mouse)Not determined112881775462817873Mouse
11522752Cocia18_mcocaine-induced activity, QTL 18 (mouse)113111738265117382Mouse
11059563Lmr31_mleishmaniasis resistance 31 (mouse)113220975066209867Mouse
1357782Char8_mP. chabaudi malaria resistance QTL 8 (mouse)Not determined113568778969794161Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113600000085000000Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113639175083590530Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113661246070618665Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113672273870723028Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113719011571190238Mouse
4142475Ity2a_mimmunity to S. typhimurium 2a (mouse)Not determined113787775360511890Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113812528972125383Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114236579176365904Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114236579176365904Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114473921176963931Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44739211113167183Mouse
4141000Nidd3_mnon-insulin-dependent diabetes mellitus 3 (mouse)Not determined4515120179151308Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114527504680087498Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114581775489927907Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114629434180294436Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114642858180428696Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115018736584187585Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115260355986603559Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115349976287499911Mouse
4141084Spqq1_msperm quality QTL 1 (mouse)Not determined5417484463428696Mouse
1302186Blmpf2_mbleomycin-induced pulmonary fibrosis 2 (mouse)Not determined115417484467187585Mouse
4142148Ckdbp2_mchronic kidney disease blood pressure locus 2 (mouse)Not determined115419011565213015Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115423592683842826Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5539415972319101Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156973201114267131Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115786383491863932Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1086
Count of miRNA genes:565
Interacting mature miRNAs:651
Transcripts:ENSMUST00000035604, ENSMUST00000102711, ENSMUST00000134733, ENSMUST00000134953, ENSMUST00000172035
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001166669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001166670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001166671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001374702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_172558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AI462876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK131137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK143536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197346 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL672182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC137802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC144921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC144922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY742908 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466628 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU695229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000035604   ⟹   ENSMUSP00000036603
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1158,121,290 - 58,168,539 (-)Ensembl
RefSeq Acc Id: ENSMUST00000102711   ⟹   ENSMUSP00000099772
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1158,121,290 - 58,168,539 (-)Ensembl
RefSeq Acc Id: ENSMUST00000134733
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1158,136,923 - 58,139,473 (-)Ensembl
RefSeq Acc Id: ENSMUST00000134953   ⟹   ENSMUSP00000116600
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1158,155,029 - 58,160,768 (-)Ensembl
RefSeq Acc Id: ENSMUST00000172035   ⟹   ENSMUSP00000131842
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1158,120,002 - 58,168,539 (-)Ensembl
RefSeq Acc Id: NM_001166669   ⟹   NP_001160141
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,010,827 - 58,059,365 (-)NCBI
GRCm381158,120,001 - 58,168,539 (-)NCBI
MGSCv371157,933,503 - 57,982,041 (-)RGD
Celera1162,874,539 - 62,922,743 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001166670   ⟹   NP_001160142
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,010,827 - 58,059,365 (-)NCBI
GRCm381158,120,001 - 58,168,539 (-)NCBI
MGSCv371157,933,503 - 57,982,041 (-)RGD
Celera1162,874,539 - 62,922,743 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001166671   ⟹   NP_001160143
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,010,827 - 58,059,365 (-)NCBI
GRCm381158,120,001 - 58,168,539 (-)NCBI
MGSCv371157,933,503 - 57,982,041 (-)RGD
Celera1162,874,539 - 62,922,743 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001374702   ⟹   NP_001361631
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,010,827 - 58,059,339 (-)NCBI
GRCm381158,120,001 - 58,168,513 (-)NCBI
RefSeq Acc Id: NM_172558   ⟹   NP_766146
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,010,827 - 58,059,365 (-)NCBI
GRCm381158,120,001 - 58,168,539 (-)NCBI
MGSCv371157,933,503 - 57,982,041 (-)RGD
Celera1162,874,539 - 62,922,743 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006532853   ⟹   XP_006532916
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,010,827 - 58,059,351 (-)NCBI
GRCm381158,120,001 - 58,168,495 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314445   ⟹   XP_017169934
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,010,827 - 58,059,365 (-)NCBI
GRCm381158,120,001 - 58,168,526 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314446   ⟹   XP_017169935
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,010,827 - 58,059,378 (-)NCBI
GRCm381158,120,001 - 58,168,554 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156545   ⟹   XP_036012438
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391158,010,827 - 58,059,351 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_766146   ⟸   NM_172558
- Peptide Label: isoform 2
- UniProtKB: Q8BX17 (UniProtKB/Swiss-Prot),   Q3TR97 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001160141   ⟸   NM_001166669
- Peptide Label: isoform 1
- UniProtKB: Q8BX17 (UniProtKB/Swiss-Prot),   E9PUU4 (UniProtKB/TrEMBL),   Q3TR97 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001160142   ⟸   NM_001166670
- Peptide Label: isoform 3
- UniProtKB: Q8BX17 (UniProtKB/Swiss-Prot),   Q3TR97 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001160143   ⟸   NM_001166671
- Peptide Label: isoform 4
- UniProtKB: Q8BX17 (UniProtKB/Swiss-Prot),   Q3TR97 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006532916   ⟸   XM_006532853
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_017169935   ⟸   XM_017314446
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017169934   ⟸   XM_017314445
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_001361631   ⟸   NM_001374702
- Peptide Label: isoform 5
RefSeq Acc Id: ENSMUSP00000131842   ⟸   ENSMUST00000172035
RefSeq Acc Id: ENSMUSP00000116600   ⟸   ENSMUST00000134953
RefSeq Acc Id: ENSMUSP00000036603   ⟸   ENSMUST00000035604
RefSeq Acc Id: ENSMUSP00000099772   ⟸   ENSMUST00000102711
RefSeq Acc Id: XP_036012438   ⟸   XM_036156545
- Peptide Label: isoform X4
Protein Domains
WD_REPEATS_REGION

Promoters
RGD ID:6820932
Promoter ID:MM_KWN:7539
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Liver,   Lung,   MEF_B4
Transcripts:ENSMUST00000102711,   NM_001166669,   NM_001166670,   NM_001166671,   NM_172558,   UC007JAO.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361157,981,729 - 57,982,229 (-)MPROMDB
RGD ID:8674738
Promoter ID:EPDNEW_M15400
Type:initiation region
Name:Gemin5_1
Description:Mus musculus gem nuclear organelle associated protein 5 , transcriptvariant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381158,168,513 - 58,168,573EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2449311 AgrOrtholog
Ensembl Genes ENSMUSG00000037275 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000036603 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000099772 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000116600 UniProtKB/TrEMBL
  ENSMUSP00000131842 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000035604 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000102711 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000134953 UniProtKB/TrEMBL
  ENSMUST00000172035 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH 2.130.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Apc4_WD40_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G-protein_beta_WD-40_rep UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Quinoprotein_ADH-like_supfam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:216766 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:2449311 ENTREZGENE
NCBI Gene 216766 ENTREZGENE
Pfam ANAPC4_WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Gemin5 PhenoGen
PRINTS GPROTEINBRPT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE WD_REPEATS_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD_REPEATS_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD_REPEATS_REGION UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50978 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF50998 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A2AFQ9_MOUSE UniProtKB/TrEMBL
  B2RQ83_MOUSE UniProtKB/TrEMBL
  B7ZN04_MOUSE UniProtKB/TrEMBL
  E9PUU4 ENTREZGENE, UniProtKB/TrEMBL
  F7CKD6_MOUSE UniProtKB/TrEMBL
  GEMI5_MOUSE UniProtKB/Swiss-Prot
  Q3TR97 ENTREZGENE, UniProtKB/TrEMBL
  Q6KAS0_MOUSE UniProtKB/TrEMBL
  Q8BX17 ENTREZGENE
UniProt Secondary Q3UPH2 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-05-16 Gemin5  gem nuclear organelle associated protein 5    gem (nuclear organelle) associated protein 5  Symbol and/or name change 5135510 APPROVED