Nipsnap1 (nipsnap homolog 1) - Rat Genome Database

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Gene: Nipsnap1 (nipsnap homolog 1) Mus musculus
Analyze
Symbol: Nipsnap1
Name: nipsnap homolog 1
RGD ID: 1321312
MGI Page MGI
Description: Involved in sensory perception of pain. Located in membrane and mitochondrion. Is active in synaptic membrane. Is expressed in several structures, including gonad; gut; nervous system; submandibular gland primordium; and tooth. Orthologous to human NIPSNAP1 (nipsnap homolog 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1; nipsnap homolog 1 (C. elegans); protein NipSnap homolog 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39114,823,951 - 4,844,201 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl114,823,951 - 4,844,200 (+)EnsemblGRCm39 Ensembl
GRCm38114,873,951 - 4,894,201 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl114,873,951 - 4,894,200 (+)EnsemblGRCm38mm10GRCm38
MGSCv37114,774,006 - 4,794,203 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36114,774,006 - 4,794,203 (+)NCBIMGSCv36mm8
Celera115,371,057 - 5,391,043 (+)NCBICelera
Cytogenetic Map11A1NCBI
cM Map113.07NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-trinitrotoluene  (ISO)
2,4-dinitrotoluene  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
4,4'-diaminodiphenylmethane  (ISO)
4-hydroxyphenyl retinamide  (EXP)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amitrole  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
bortezomib  (ISO)
Brodifacoum  (ISO)
cadmium dichloride  (ISO)
CGP 52608  (ISO)
chlorpyrifos  (EXP)
cisplatin  (ISO)
clotrimazole  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
dibenzofurans  (EXP)
dibutyl phthalate  (EXP,ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP)
fipronil  (ISO)
flutamide  (ISO)
ivermectin  (ISO)
mercury dichloride  (ISO)
methapyrilene  (ISO)
methimazole  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
p-toluidine  (ISO)
paracetamol  (EXP,ISO)
perfluorooctanoic acid  (ISO)
propiconazole  (EXP)
resveratrol  (ISO)
SB 431542  (ISO)
sodium arsenite  (EXP)
Soman  (ISO)
sulfadimethoxine  (ISO)
sunitinib  (ISO)
tamibarotene  (ISO)
tetrachloromethane  (EXP,ISO)
tetrahydropalmatine  (ISO)
thapsigargin  (ISO)
thimerosal  (ISO)
thioacetamide  (ISO)
tolcapone  (ISO)
trichostatin A  (ISO)
triptonide  (EXP)
tunicamycin  (ISO)
urethane  (ISO)
valdecoxib  (ISO)
valproic acid  (EXP,ISO)
vancomycin  (EXP)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function
protein binding  (IDA,IPI)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria. Mootha VK, etal., Cell 2003 Nov 26;115(5):629-40.
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. Mouse MP Annotation Import Pipeline RGD automated import pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. Large-scale screen for genes involved in gonad development. Wertz K and Herrmann BG, Mech Dev 2000 Nov;98(1-2):51-70.
Additional References at PubMed
PMID:9661659   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11352567   PMID:12477932   PMID:12865426   PMID:14610273   PMID:15489334   PMID:15747579   PMID:16141072   PMID:16141073  
PMID:16512683   PMID:18392847   PMID:18614015   PMID:18799693   PMID:20497468   PMID:21267068   PMID:21677750   PMID:21873635   PMID:22311985   PMID:22794259   PMID:27160897   PMID:28190767  
PMID:32325033   PMID:36417873   PMID:37423391  


Genomics

Comparative Map Data
Nipsnap1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39114,823,951 - 4,844,201 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl114,823,951 - 4,844,200 (+)EnsemblGRCm39 Ensembl
GRCm38114,873,951 - 4,894,201 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl114,873,951 - 4,894,200 (+)EnsemblGRCm38mm10GRCm38
MGSCv37114,774,006 - 4,794,203 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36114,774,006 - 4,794,203 (+)NCBIMGSCv36mm8
Celera115,371,057 - 5,391,043 (+)NCBICelera
Cytogenetic Map11A1NCBI
cM Map113.07NCBI
NIPSNAP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382229,554,808 - 29,581,113 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2229,554,808 - 29,581,327 (-)EnsemblGRCh38hg38GRCh38
GRCh372229,950,797 - 29,977,102 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362228,280,800 - 28,307,328 (-)NCBINCBI36Build 36hg18NCBI36
Build 342228,275,353 - 28,301,880NCBI
Celera2213,750,532 - 13,776,881 (-)NCBICelera
Cytogenetic Map22q12.2NCBI
HuRef2212,914,568 - 12,940,820 (-)NCBIHuRef
CHM1_12229,910,086 - 29,936,601 (-)NCBICHM1_1
T2T-CHM13v2.02230,018,168 - 30,044,476 (-)NCBIT2T-CHM13v2.0
Nipsnap1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81483,957,714 - 83,981,579 (+)NCBIGRCr8
mRatBN7.21479,734,234 - 79,758,101 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1479,734,209 - 79,758,098 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1484,164,856 - 84,188,722 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01485,404,932 - 85,428,798 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01481,854,604 - 81,878,465 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01485,113,578 - 85,137,457 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1485,113,578 - 85,137,454 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01485,791,355 - 85,815,292 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41485,532,437 - 85,556,559 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11485,551,597 - 85,575,704 (+)NCBI
Celera1478,638,919 - 78,662,697 (+)NCBICelera
Cytogenetic Map14q21NCBI
Nipsnap1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554553,795,413 - 3,815,289 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554553,796,445 - 3,815,290 (-)NCBIChiLan1.0ChiLan1.0
NIPSNAP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22339,528,536 - 39,554,461 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12242,229,765 - 42,255,697 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02210,600,285 - 10,626,474 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12228,405,507 - 28,419,201 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2228,406,638 - 28,432,897 (-)Ensemblpanpan1.1panPan2
NIPSNAP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12622,785,902 - 22,800,241 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2622,786,987 - 22,800,206 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2622,657,592 - 22,671,514 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02623,159,706 - 23,173,623 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2623,122,940 - 23,173,578 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12622,869,510 - 22,883,628 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02623,132,509 - 23,146,425 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02623,192,431 - 23,206,550 (-)NCBIUU_Cfam_GSD_1.0
Nipsnap1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118112,353,021 - 112,365,770 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366573,504,913 - 3,517,708 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366573,504,940 - 3,517,654 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NIPSNAP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1446,624,727 - 46,641,438 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11446,624,368 - 46,641,453 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21449,658,228 - 49,675,655 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NIPSNAP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11912,429,036 - 12,454,532 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1912,428,739 - 12,454,297 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666045113,685,568 - 113,710,669 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nipsnap1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247475,874,226 - 5,894,031 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247475,875,123 - 5,893,668 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Nipsnap1
758 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1303
Count of miRNA genes:636
Interacting mature miRNAs:760
Transcripts:ENSMUST00000038570, ENSMUST00000135405, ENSMUST00000136552, ENSMUST00000139737, ENSMUST00000141269, ENSMUST00000149603
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357722Vtbt11_mvertebral trabecular bone trait 11 (mouse)Not determined11123880487Mouse
1300768Tshp9_mtooth shape 9 (mouse)Not determined11125976374Mouse
1301765Skull15_mskull morphology 15 (mouse)Not determined11125976374Mouse
1300661Lmr6_mleishmaniasis resistance 6 (mouse)Not determined11125976374Mouse
10044008Hbnr15_mHeligmosomoides bakeri nematode resistance 15 (mouse)Not determined1122705234227232Mouse
1300599Cocrb11_mcocaine related behavior 11 (mouse)Not determined11267035536671472Mouse
27095914Pglq16_mpelvic girdle length QTL 16, 16 week (mouse)11325000018150000Mouse
27095919Pglq10_mpelvic girdle length QTL 10, 10 week (mouse)11325000018450000Mouse
27095925Pglq5_mpelvic girdle length QTL 5, 5 week (mouse)11325000019750000Mouse
27095904Scvln12_msacral vertebrae length 2, 10 week (mouse)11325000034495048Mouse
27095909Scvln6_msacral vertebrae length 2, 5 week (mouse)11325000044090827Mouse
27226798Scvln18_msacral vertebrae length 2, 16 week (mouse)11325000060690826Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11325000062890826Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
10053676Eae44a_mexperimental allergic encephalomyelitis susceptibility 44a (mouse)Not determined11450789621379532Mouse
27226741Metcl5_mmetatarsal-calcaneal length 5, 5 week (mouse)11465000046290827Mouse

Markers in Region
AI327362  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38114,893,255 - 4,893,364UniSTSGRCm38
MGSCv37114,793,258 - 4,793,367UniSTSGRCm37
Celera115,390,098 - 5,390,207UniSTS
Cytogenetic Map11A1UniSTS
Whitehead/MRC_RH111.47UniSTS
AJ001260  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38114,893,445 - 4,893,526UniSTSGRCm38
MGSCv37114,793,448 - 4,793,529UniSTSGRCm37
Celera115,390,288 - 5,390,369UniSTS
Cytogenetic Map11A1UniSTS
Whitehead/MRC_RH1117.49UniSTS
D0Uia24  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38114,877,282 - 4,877,645UniSTSGRCm38
GRCm387114,196,036 - 114,197,178UniSTSGRCm38
MGSCv377121,339,550 - 121,340,692UniSTSGRCm37
MGSCv37114,777,285 - 4,777,648UniSTSGRCm37
Celera115,374,334 - 5,374,697UniSTS
Celera7114,156,198 - 114,157,340UniSTS
Cytogenetic Map11A1UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000038570   ⟹   ENSMUSP00000049338
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl114,823,951 - 4,844,200 (+)Ensembl
GRCm38.p6 Ensembl114,873,951 - 4,894,200 (+)Ensembl
RefSeq Acc Id: ENSMUST00000135405
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl114,824,005 - 4,834,404 (+)Ensembl
GRCm38.p6 Ensembl114,874,005 - 4,884,404 (+)Ensembl
RefSeq Acc Id: ENSMUST00000136552   ⟹   ENSMUSP00000117760
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl114,823,999 - 4,843,617 (+)Ensembl
GRCm38.p6 Ensembl114,873,999 - 4,893,617 (+)Ensembl
RefSeq Acc Id: ENSMUST00000139737   ⟹   ENSMUSP00000122885
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl114,833,194 - 4,839,131 (+)Ensembl
GRCm38.p6 Ensembl114,883,194 - 4,889,131 (+)Ensembl
RefSeq Acc Id: ENSMUST00000141269
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl114,833,264 - 4,834,116 (+)Ensembl
GRCm38.p6 Ensembl114,883,264 - 4,884,116 (+)Ensembl
RefSeq Acc Id: ENSMUST00000149603
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl114,833,206 - 4,839,973 (+)Ensembl
GRCm38.p6 Ensembl114,883,206 - 4,889,973 (+)Ensembl
RefSeq Acc Id: NM_008698   ⟹   NP_032724
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39114,823,951 - 4,844,201 (+)NCBI
GRCm38114,873,951 - 4,894,201 (+)NCBI
MGSCv37114,774,006 - 4,794,203 (+)RGD
Celera115,371,057 - 5,391,043 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006514575   ⟹   XP_006514638
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39114,827,322 - 4,844,201 (+)NCBI
GRCm38114,877,323 - 4,894,201 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006514577   ⟹   XP_006514640
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39114,833,195 - 4,844,201 (+)NCBI
GRCm38114,883,195 - 4,894,201 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001779913
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39114,823,951 - 4,844,201 (+)NCBI
GRCm38114,873,959 - 4,894,201 (+)NCBI
Sequence:
RefSeq Acc Id: NP_032724   ⟸   NM_008698
- UniProtKB: O55125 (UniProtKB/Swiss-Prot),   Q5SVF7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514638   ⟸   XM_006514575
- Peptide Label: isoform X1
- UniProtKB: Q3UGS1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514640   ⟸   XM_006514577
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSMUSP00000122885   ⟸   ENSMUST00000139737
RefSeq Acc Id: ENSMUSP00000117760   ⟸   ENSMUST00000136552
RefSeq Acc Id: ENSMUSP00000049338   ⟸   ENSMUST00000038570
Protein Domains
NIPSNAP

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O55125-F1-model_v2 AlphaFold O55125 1-284 view protein structure

Promoters
RGD ID:6821424
Promoter ID:MM_KWN:6255
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:OTTMUST00000011320,   OTTMUST00000011321,   OTTMUST00000061468
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36114,773,711 - 4,774,211 (+)MPROMDB
RGD ID:6821422
Promoter ID:MM_KWN:6256
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Liver
Transcripts:ENSMUST00000093370,   ENSMUST00000093371,   OTTMUST00000011322,   OTTMUST00000011323,   OTTMUST00000011324
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36114,782,824 - 4,783,324 (+)MPROMDB
RGD ID:8673814
Promoter ID:EPDNEW_M14938
Type:multiple initiation site
Name:Nipsnap1_1
Description:Mus musculus nipsnap homolog 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38114,873,988 - 4,874,048EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1278344 AgrOrtholog
Ensembl Genes ENSMUSG00000034285 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000038570 ENTREZGENE
  ENSMUST00000038570.9 UniProtKB/Swiss-Prot
  ENSMUST00000136552.8 UniProtKB/TrEMBL
  ENSMUST00000139737.2 UniProtKB/TrEMBL
Gene3D-CATH 3.30.70.100 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Dimeric_a/b-barrel UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NIPSNAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:18082 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1278344 ENTREZGENE
NCBI Gene 18082 ENTREZGENE
PANTHER NIPSNAP-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN NIPSNAP HOMOLOG 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam NIPSNAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Nipsnap1 PhenoGen
Superfamily-SCOP SSF54909 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt F2Z416_MOUSE UniProtKB/TrEMBL
  NIPS1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3UGS1 ENTREZGENE, UniProtKB/TrEMBL
  Q5SVF7 ENTREZGENE, UniProtKB/TrEMBL
  Q5SVG6_MOUSE UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-05-09 Nipsnap1  nipsnap homolog 1    nipsnap homolog 1 (C. elegans)  Symbol and/or name change 5135510 APPROVED
2016-02-29 Nipsnap1  nipsnap homolog 1 (C. elegans)    4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)  Symbol and/or name change 5135510 APPROVED