Cox10 (heme A:farnesyltransferase cytochrome c oxidase assembly factor 10) - Rat Genome Database
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Gene: Cox10 (heme A:farnesyltransferase cytochrome c oxidase assembly factor 10) Mus musculus
Analyze
Symbol: Cox10
Name: heme A:farnesyltransferase cytochrome c oxidase assembly factor 10
RGD ID: 1321107
MGI Page MGI
Description: Is predicted to contribute to cytochrome-c oxidase activity. Involved in several processes, including cytochrome complex assembly; heme A biosynthetic process; and mitochondrial fission. Localizes to mitochondrion. Is expressed in alimentary system; nervous system; and respiratory system. Used to study Parkinson's disease; cytochrome-c oxidase deficiency disease; and mitochondrial myopathy. Human ortholog(s) of this gene implicated in cytochrome-c oxidase deficiency disease. Orthologous to human COX10 (cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; hereditary coproporphyria pathway; INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-diaminodiphenylmethane.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 2410004F01Rik; AU042636; COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase; cytochrome c oxidase assembly protein 10; heme O synthase; protoheme IX farnesyltransferase, mitochondrial; RP23-78H18.1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391163,853,453 - 63,970,298 (-)NCBIGRCm39mm39
GRCm39 Ensembl1163,853,453 - 63,970,294 (-)Ensembl
GRCm381163,962,627 - 64,079,472 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1163,962,627 - 64,079,468 (-)EnsemblGRCm38mm10GRCm38
MGSCv371163,776,129 - 63,892,974 (-)NCBIGRCm37mm9NCBIm37
MGSCv361163,780,063 - 63,895,609 (-)NCBImm8
Celera1170,900,073 - 71,017,265 (-)NCBICelera
Cytogenetic Map11B3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

Additional References at PubMed
PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:14681479   PMID:15489334   PMID:15782199   PMID:16103131   PMID:16141072   PMID:16141073  
PMID:16602821   PMID:16782876   PMID:17210651   PMID:17715058   PMID:17951359   PMID:18614015   PMID:20656789   PMID:20738906   PMID:21267068   PMID:21873635   PMID:22622581   PMID:22914734  
PMID:27038906   PMID:27050520   PMID:27105708   PMID:27288451   PMID:28285833   PMID:28314814   PMID:28591633   PMID:29657030   PMID:30268775   PMID:30971389   PMID:31484989   PMID:32080200  
PMID:32694534  


Genomics

Comparative Map Data
Cox10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391163,853,453 - 63,970,298 (-)NCBIGRCm39mm39
GRCm39 Ensembl1163,853,453 - 63,970,294 (-)Ensembl
GRCm381163,962,627 - 64,079,472 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1163,962,627 - 64,079,468 (-)EnsemblGRCm38mm10GRCm38
MGSCv371163,776,129 - 63,892,974 (-)NCBIGRCm37mm9NCBIm37
MGSCv361163,780,063 - 63,895,609 (-)NCBImm8
Celera1170,900,073 - 71,017,265 (-)NCBICelera
Cytogenetic Map11B3NCBI
COX10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1714,069,490 - 14,231,736 (+)EnsemblGRCh38hg38GRCh38
GRCh381714,069,504 - 14,208,677 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371713,972,821 - 14,111,994 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361713,913,444 - 14,052,719 (+)NCBINCBI36hg18NCBI36
Build 341713,913,443 - 14,052,717NCBI
Celera1713,998,545 - 14,137,802 (+)NCBI
Cytogenetic Map17p12NCBI
HuRef1713,868,124 - 14,007,418 (+)NCBIHuRef
CHM1_11713,981,510 - 14,120,811 (+)NCBICHM1_1
Cox10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21048,630,993 - 48,742,835 (-)NCBI
Rnor_6.0 Ensembl1050,439,782 - 50,574,539 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01050,439,778 - 50,563,920 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01050,207,540 - 50,331,232 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41050,191,370 - 50,230,838 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1047,863,873 - 47,975,130 (-)NCBICelera
Cytogenetic Map10q23NCBI
LOC102022268
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554673,292,018 - 3,415,778 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554673,294,200 - 3,415,778 (-)NCBIChiLan1.0ChiLan1.0
LOC100980340
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11742,089,989 - 42,274,872 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1742,091,452 - 42,274,762 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01737,443,319 - 37,582,436 (-)NCBIMhudiblu_PPA_v0panPan3
COX10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1537,853,495 - 37,982,228 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl537,852,875 - 37,982,243 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha538,001,945 - 38,128,093 (+)NCBI
ROS_Cfam_1.0537,962,402 - 38,090,211 (+)NCBI
UMICH_Zoey_3.1537,939,923 - 38,067,239 (+)NCBI
UNSW_CanFamBas_1.0537,883,236 - 38,009,345 (+)NCBI
UU_Cfam_GSD_1.0538,072,091 - 38,199,459 (+)NCBI
LOC101967907
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560256,813,655 - 56,935,692 (+)NCBI
SpeTri2.0NW_004936724783,591 - 905,625 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
COX10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1258,011,831 - 58,117,700 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11258,011,831 - 58,110,575 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21260,937,041 - 60,944,770 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Sscrofa10.21261,048,730 - 61,076,748 (+)NCBISscrofa10.2Sscrofa10.2susScr3
COX10
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11613,410,654 - 13,550,922 (+)NCBI
ChlSab1.1 Ensembl1613,410,792 - 13,551,903 (+)Ensembl
LOC101726271
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248772,161,819 - 2,282,336 (+)NCBI

Position Markers
AW549955  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381163,963,090 - 63,963,239UniSTSGRCm38
MGSCv371163,776,592 - 63,776,741UniSTSGRCm37
Celera1170,900,536 - 70,900,685UniSTS
Cytogenetic Map11B3UniSTS
Whitehead/MRC_RH11839.92UniSTS
AU042636  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381163,963,006 - 63,963,112UniSTSGRCm38
MGSCv371163,776,508 - 63,776,614UniSTSGRCm37
Celera1170,900,452 - 70,900,558UniSTS
Cytogenetic Map11B3UniSTS
Whitehead/MRC_RH11839.31UniSTS
D11Mit339  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381163,992,937 - 63,993,061UniSTSGRCm38
MGSCv371163,806,439 - 63,806,563UniSTSGRCm37
Celera1170,930,390 - 70,930,514UniSTS
Cytogenetic Map11B3UniSTS
cM Map1134.0UniSTS
Whitehead Genetic1131.7UniSTS
Whitehead/MRC_RH11835.12UniSTS
44.MMHAP54FLG5.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381164,011,577 - 64,011,738UniSTSGRCm38
MGSCv371163,825,079 - 63,825,240UniSTSGRCm37
Celera1170,949,031 - 70,949,192UniSTS
Cytogenetic Map11B3UniSTS
Whitehead/MRC_RH11839.31UniSTS
UniSTS:236610  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381163,962,950 - 63,963,152UniSTSGRCm38
MGSCv371163,776,452 - 63,776,654UniSTSGRCm37
Celera1170,900,396 - 70,900,598UniSTS
Cytogenetic Map11B3UniSTS
UniSTS:236611  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381164,080,529 - 64,080,851UniSTSGRCm38
MGSCv371163,894,031 - 63,894,353UniSTSGRCm37
Celera1171,018,322 - 71,018,644UniSTS
Cytogenetic Map11B3UniSTS
UniSTS:236612  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381164,079,639 - 64,079,734UniSTSGRCm38
MGSCv371163,893,141 - 63,893,236UniSTSGRCm37
Celera1171,017,432 - 71,017,527UniSTS
Cytogenetic Map11B3UniSTS
G54543  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381164,011,485 - 64,011,886UniSTSGRCm38
MGSCv371163,824,987 - 63,825,388UniSTSGRCm37
Celera1170,948,939 - 70,949,340UniSTS
Cytogenetic Map11B3UniSTS
Cox10  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11B3UniSTS
cM Map11 UniSTS
Cox10  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11B3UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11330000072800000Mouse
13208559Wght10_mweight 10 (mouse)11400000089000000Mouse
13208558Lgth12_mbody length 12 (mouse)11400000095000000Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11693027789128908Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111160000068600000Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111180000066100000Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1231863768609504Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111231863768609504Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111231863768609504Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1231863768609504Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1231863768609504Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111231863768609504Mouse
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1231863768609504Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1231863768609504Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1231863768609504Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111231863768609504Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111231863768609504Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111231863769794121Mouse
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111710617567187585Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111783196668609504Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1917420497007000Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112185736495990405Mouse
11522752Cocia18_mcocaine-induced activity, QTL 18 (mouse)113111738265117382Mouse
11059563Lmr31_mleishmaniasis resistance 31 (mouse)113220975066209867Mouse
1357782Char8_mP. chabaudi malaria resistance QTL 8 (mouse)Not determined113568778969794161Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113600000085000000Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113639175083590530Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113661246070618665Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113672273870723028Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113719011571190238Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113812528972125383Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114236579176365904Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114236579176365904Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114473921176963931Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44739211113167183Mouse
4141000Nidd3_mnon-insulin-dependent diabetes mellitus 3 (mouse)Not determined4515120179151308Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114527504680087498Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114581775489927907Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114629434180294436Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114642858180428696Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115018736584187585Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115260355986603559Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115349976287499911Mouse
1302186Blmpf2_mbleomycin-induced pulmonary fibrosis 2 (mouse)Not determined115417484467187585Mouse
4142148Ckdbp2_mchronic kidney disease blood pressure locus 2 (mouse)Not determined115419011565213015Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115423592683842826Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5539415972319101Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156973201114267131Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115786383491863932Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115859972974863932Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15861720487804412Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5882844085175703Mouse
11532697Sluc36_msusceptibility to lung cancer 36 (mouse)115936579169591873Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116179599488808902Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116226517996265327Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162700000109500000Mouse
4141642Ltxs2_mlethal factor toxin susceptibility 2 (mouse)Not determined116315128768609504Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116342858181939647Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116342858194173092Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:668
Count of miRNA genes:452
Interacting mature miRNAs:499
Transcripts:ENSMUST00000049091, ENSMUST00000125702
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_178379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006534168 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK010385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK149999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK156865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK179799 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK199666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219091 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL603889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL663033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC018301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY078593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000049091   ⟹   ENSMUSP00000040138
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1163,962,627 - 64,079,466 (-)Ensembl
RefSeq Acc Id: ENSMUST00000125702
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1164,071,398 - 64,079,468 (-)Ensembl
RefSeq Acc Id: NM_178379   ⟹   NP_848466
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391163,853,453 - 63,970,298 (-)NCBI
GRCm381163,962,627 - 64,079,472 (-)ENTREZGENE
MGSCv371163,776,129 - 63,892,974 (-)RGD
Celera1170,900,073 - 71,017,265 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006534168   ⟹   XP_006534231
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391163,853,453 - 63,942,207 (-)NCBI
GRCm381163,962,627 - 64,051,381 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_848466   ⟸   NM_178379
- UniProtKB: Q8CFY5 (UniProtKB/Swiss-Prot),   Q3U3N1 (UniProtKB/TrEMBL),   Q3UDN4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006534231   ⟸   XM_006534168
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSMUSP00000040138   ⟸   ENSMUST00000049091

Promoters
RGD ID:6821193
Promoter ID:MM_KWN:7874
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:LINCRNA_168,   OTTMUST00000013112,   OTTMUST00000013114,   OTTMUST00000013115,   UC007JKP.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361163,892,721 - 63,893,221 (+)MPROMDB
RGD ID:8675098
Promoter ID:EPDNEW_M15544
Type:multiple initiation site
Name:Cox10_1
Description:Mus musculus cytochrome c oxidase assembly protein 10 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381164,079,470 - 64,079,530EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1917633 AgrOrtholog
Ensembl Genes ENSMUSG00000042148 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000040138 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000049091 ENTREZGENE, UniProtKB/Swiss-Prot
InterPro Protohaem_IX_farnesylTrfase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Protohaem_IX_farnesylTrfase_mt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UbiA_prenyltransferase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UbiA_prenylTrfase_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:70383 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1917633 ENTREZGENE
NCBI Gene 70383 ENTREZGENE
PANTHER PTHR43448 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam UbiA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cox10 PhenoGen
PIRSF COX10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE UBIA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGRFAMs cyoE_ctaB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt COX10_MOUSE UniProtKB/Swiss-Prot
  Q3T981_MOUSE UniProtKB/TrEMBL
  Q3TAS4_MOUSE UniProtKB/TrEMBL
  Q3U3N1 ENTREZGENE, UniProtKB/TrEMBL
  Q3UDN4 ENTREZGENE, UniProtKB/TrEMBL
  Q8CFY5 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-29 Cox10  heme A:farnesyltransferase cytochrome c oxidase assembly factor 10    cytochrome c oxidase assembly protein 10  Symbol and/or name change 5135510 APPROVED
2012-11-27 Cox10  cytochrome c oxidase assembly protein 10    COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)  Symbol and/or name change 5135510 APPROVED