THAP11 (THAP domain containing 11) - Rat Genome Database

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Gene: THAP11 (THAP domain containing 11) Homo sapiens
Analyze
Symbol: THAP11
Name: THAP domain containing 11
RGD ID: 1321069
HGNC Page HGNC:23194
Description: Enables DNA-binding transcription repressor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and zinc ion binding activity. Involved in negative regulation of transcription by RNA polymerase II. Located in cytosol and nucleoplasm.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: CTG-B43a; CTG-B45d; HRIHFB2206; RONIN; THAP domain-containing protein 11
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381667,842,320 - 67,844,195 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1667,842,320 - 67,844,195 (+)EnsemblGRCh38hg38GRCh38
GRCh371667,876,223 - 67,878,098 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361666,433,714 - 66,435,599 (+)NCBINCBI36Build 36hg18NCBI36
Build 341666,433,713 - 66,435,598NCBI
Celera1652,384,625 - 52,386,510 (+)NCBICelera
Cytogenetic Map16q22.1NCBI
HuRef1653,749,224 - 53,751,109 (+)NCBIHuRef
CHM1_11669,284,395 - 69,286,280 (+)NCBICHM1_1
T2T-CHM13v2.01673,638,094 - 73,639,969 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8325628   PMID:9853615   PMID:12477932   PMID:12575992   PMID:15489334   PMID:18029348   PMID:18330356   PMID:18585351   PMID:18976975   PMID:19008924   PMID:19224332   PMID:19274049  
PMID:20301503   PMID:20360068   PMID:21400515   PMID:21873635   PMID:21988832   PMID:22371484   PMID:22673507   PMID:22898364   PMID:22990118   PMID:23306615   PMID:23539139   PMID:24637716  
PMID:24740910   PMID:25056061   PMID:25416956   PMID:25437553   PMID:26186194   PMID:26496610   PMID:26975212   PMID:27173435   PMID:27576892   PMID:28449119   PMID:28514442   PMID:29150431  
PMID:29269392   PMID:29507755   PMID:30463901   PMID:31041561   PMID:31905202   PMID:31969497   PMID:31980649   PMID:32296183   PMID:32807901   PMID:32908912   PMID:32994395   PMID:33658012  
PMID:33961781   PMID:35140242   PMID:35156780   PMID:35241646   PMID:35439318   PMID:35748872   PMID:35906200   PMID:35944360   PMID:36244648   PMID:36543142   PMID:36688959   PMID:37148549  
PMID:38113319   PMID:38113892  


Genomics

Comparative Map Data
THAP11
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381667,842,320 - 67,844,195 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1667,842,320 - 67,844,195 (+)EnsemblGRCh38hg38GRCh38
GRCh371667,876,223 - 67,878,098 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361666,433,714 - 66,435,599 (+)NCBINCBI36Build 36hg18NCBI36
Build 341666,433,713 - 66,435,598NCBI
Celera1652,384,625 - 52,386,510 (+)NCBICelera
Cytogenetic Map16q22.1NCBI
HuRef1653,749,224 - 53,751,109 (+)NCBIHuRef
CHM1_11669,284,395 - 69,286,280 (+)NCBICHM1_1
T2T-CHM13v2.01673,638,094 - 73,639,969 (+)NCBIT2T-CHM13v2.0
Thap11
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398106,581,735 - 106,583,582 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8106,581,764 - 106,583,582 (+)EnsemblGRCm39 Ensembl
GRCm388105,855,103 - 105,856,950 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8105,855,132 - 105,856,950 (+)EnsemblGRCm38mm10GRCm38
MGSCv378108,379,003 - 108,380,850 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv368108,744,272 - 108,746,079 (+)NCBIMGSCv36mm8
Celera8110,082,856 - 110,084,703 (+)NCBICelera
Cytogenetic Map8D3NCBI
cM Map853.05NCBI
Thap11
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81950,656,839 - 50,658,656 (+)NCBIGRCr8
mRatBN7.21933,746,977 - 33,748,794 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1933,746,854 - 33,749,540 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1940,562,517 - 40,564,334 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01941,215,838 - 41,217,655 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01943,514,172 - 43,515,995 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01937,825,576 - 37,827,393 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1937,825,576 - 37,827,393 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01948,692,347 - 48,694,164 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41935,692,222 - 35,694,039 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11935,697,320 - 35,698,247 (+)NCBI
Celera1933,174,537 - 33,176,354 (+)NCBICelera
Cytogenetic Map19q12NCBI
Thap11
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554848,857,684 - 8,858,592 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554848,857,015 - 8,859,091 (-)NCBIChiLan1.0ChiLan1.0
THAP11
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21877,369,036 - 77,371,151 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11683,279,512 - 83,282,590 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01648,182,825 - 48,185,866 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11667,571,212 - 67,572,894 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1667,571,277 - 67,572,206 (+)Ensemblpanpan1.1panPan2
THAP11
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1581,635,251 - 81,637,379 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl581,635,970 - 81,636,902 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha581,624,951 - 81,626,685 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0582,070,360 - 82,072,094 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1581,896,785 - 81,898,519 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0581,578,616 - 81,580,352 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0582,220,857 - 82,222,591 (-)NCBIUU_Cfam_GSD_1.0
Thap11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934941,376,820 - 41,378,866 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647518,210,732 - 18,211,634 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647518,209,683 - 18,212,294 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
THAP11
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl628,465,208 - 28,467,074 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1628,465,458 - 28,466,387 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2625,666,417 - 25,667,346 (-)NCBISscrofa10.2Sscrofa10.2susScr3
THAP11
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1559,595,411 - 59,598,401 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl559,596,106 - 59,597,047 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604722,321,352 - 22,323,467 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Thap11
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474618,511,684 - 18,530,149 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474618,527,396 - 18,530,145 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in THAP11
50 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 16q13-22.2(chr16:56883592-71279975)x3 copy number gain See cases [RCV000052405] Chr16:56883592..71279975 [GRCh38]
Chr16:56917504..71313878 [GRCh37]
Chr16:55475005..69871379 [NCBI36]
Chr16:16q13-22.2
pathogenic
GRCh38/hg38 16q21-23.1(chr16:58456122-74708723)x3 copy number gain See cases [RCV000052408] Chr16:58456122..74708723 [GRCh38]
Chr16:58490026..74742621 [GRCh37]
Chr16:57047527..73300122 [NCBI36]
Chr16:16q21-23.1
pathogenic
GRCh38/hg38 16q21-24.3(chr16:65313395-90081985)x3 copy number gain See cases [RCV000052421] Chr16:65313395..90081985 [GRCh38]
Chr16:65347298..90148393 [GRCh37]
Chr16:63904799..88675894 [NCBI36]
Chr16:16q21-24.3
pathogenic
GRCh38/hg38 16q21-22.1(chr16:63318997-70555249)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053334]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053334]|See cases [RCV000053334] Chr16:63318997..70555249 [GRCh38]
Chr16:63352901..70589152 [GRCh37]
Chr16:61910402..69146653 [NCBI36]
Chr16:16q21-22.1
pathogenic
GRCh38/hg38 16q21-22.1(chr16:64311275-68062011)x1 copy number loss See cases [RCV000053335] Chr16:64311275..68062011 [GRCh38]
Chr16:64345179..68095914 [GRCh37]
Chr16:62902680..66653415 [NCBI36]
Chr16:16q21-22.1
pathogenic
GRCh38/hg38 16q22.1(chr16:66694180-67865445)x1 copy number loss See cases [RCV000053336] Chr16:66694180..67865445 [GRCh38]
Chr16:66728083..67899348 [GRCh37]
Chr16:65285584..66456849 [NCBI36]
Chr16:16q22.1
pathogenic
GRCh38/hg38 16q21-24.1(chr16:62925929-84585795)x3 copy number gain See cases [RCV000135863] Chr16:62925929..84585795 [GRCh38]
Chr16:62959833..84619401 [GRCh37]
Chr16:61517334..83176902 [NCBI36]
Chr16:16q21-24.1
pathogenic
GRCh38/hg38 16q21-24.3(chr16:65511483-90096995)x3 copy number gain See cases [RCV000139426] Chr16:65511483..90096995 [GRCh38]
Chr16:65545386..90163403 [GRCh37]
Chr16:64102887..88690904 [NCBI36]
Chr16:16q21-24.3
pathogenic
GRCh38/hg38 16q21-24.3(chr16:64389378-90081985)x3 copy number gain See cases [RCV000142578] Chr16:64389378..90081985 [GRCh38]
Chr16:64423281..90148393 [GRCh37]
Chr16:62980782..88675894 [NCBI36]
Chr16:16q21-24.3
pathogenic|likely pathogenic
GRCh38/hg38 16q12.2-24.3(chr16:52899183-90088654)x3 copy number gain See cases [RCV000143425] Chr16:52899183..90088654 [GRCh38]
Chr16:52933095..90155062 [GRCh37]
Chr16:51490596..88682563 [NCBI36]
Chr16:16q12.2-24.3
pathogenic
GRCh38/hg38 16q12.1-22.1(chr16:49685521-68401712)x3 copy number gain See cases [RCV000143752] Chr16:49685521..68401712 [GRCh38]
Chr16:49719432..68435615 [GRCh37]
Chr16:48276933..66993116 [NCBI36]
Chr16:16q12.1-22.1
pathogenic
GRCh38/hg38 16q21-23.3(chr16:65957829-83611443)x3 copy number gain See cases [RCV000143742] Chr16:65957829..83611443 [GRCh38]
Chr16:65991732..83645048 [GRCh37]
Chr16:64549233..82202549 [NCBI36]
Chr16:16q21-23.3
pathogenic
GRCh37/hg19 16q11.2-24.3(chr16:46615804-90142285)x1 copy number loss Breast ductal adenocarcinoma [RCV000207138] Chr16:46615804..90142285 [GRCh37]
Chr16:16q11.2-24.3
uncertain significance
GRCh37/hg19 16q12.2-22.2(chr16:55359026-70884455)x1 copy number loss Breast ductal adenocarcinoma [RCV000207067] Chr16:55359026..70884455 [GRCh37]
Chr16:16q12.2-22.2
likely pathogenic|uncertain significance
Single allele complex Breast ductal adenocarcinoma [RCV000207314] Chr16:56368689..90141355 [GRCh37]
Chr16:16q12.2-24.3
uncertain significance
GRCh37/hg19 16q22.1(chr16:67654566-68404073)x1 copy number loss See cases [RCV000449234] Chr16:67654566..68404073 [GRCh37]
Chr16:16q22.1
likely pathogenic
GRCh37/hg19 16q11.2-24.3(chr16:46464488-90155062)x3 copy number gain See cases [RCV000446110] Chr16:46464488..90155062 [GRCh37]
Chr16:16q11.2-24.3
pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:69193-90274381)x3 copy number gain See cases [RCV000446684] Chr16:69193..90274381 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
NM_020457.3(THAP11):c.240C>G (p.Phe80Leu) single nucleotide variant Disorders of Intracellular Cobalamin Metabolism [RCV002522728]|Methylmalonic acidemia with homocystinuria, type cblX [RCV000498990] Chr16:67842794 [GRCh38]
Chr16:67876697 [GRCh37]
Chr16:16q22.1
likely pathogenic|not provided
GRCh37/hg19 16p13.2-q24.3(chr16:9273328-89548493)x3 copy number gain See cases [RCV000511622] Chr16:9273328..89548493 [GRCh37]
Chr16:16p13.2-q24.3
uncertain significance
GRCh37/hg19 16q11.2-24.3(chr16:46497599-90354753)x1 copy number loss Poly (ADP-Ribose) polymerase inhibitor response [RCV000626429] Chr16:46497599..90354753 [GRCh37]
Chr16:16q11.2-24.3
drug response
GRCh37/hg19 16p13.3-q24.3(chr16:85881-90155062) copy number gain See cases [RCV000511296] Chr16:85881..90155062 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16q11.2-24.3(chr16:46455960-90354753)x1 copy number loss Poly (ADP-Ribose) polymerase inhibitor response [RCV000626435] Chr16:46455960..90354753 [GRCh37]
Chr16:16q11.2-24.3
drug response
GRCh37/hg19 16q13-24.3(chr16:57051473-89797669)x3 copy number gain See cases [RCV000512511] Chr16:57051473..89797669 [GRCh37]
Chr16:16q13-24.3
pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:85881-90155062)x3 copy number gain See cases [RCV000512138] Chr16:85881..90155062 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16q12.2-22.2(chr16:54416050-72453266)x3 copy number gain not provided [RCV000683820] Chr16:54416050..72453266 [GRCh37]
Chr16:16q12.2-22.2
pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:88165-90274695)x3 copy number gain not provided [RCV000738918] Chr16:88165..90274695 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:61451-90294632)x3 copy number gain not provided [RCV000738915] Chr16:61451..90294632 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:88165-90163275)x3 copy number gain not provided [RCV000738917] Chr16:88165..90163275 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16q22.1(chr16:67132790-68166320) copy number loss not provided [RCV000767617] Chr16:67132790..68166320 [GRCh37]
Chr16:16q22.1
pathogenic
NM_020457.3(THAP11):c.-105G>A single nucleotide variant not provided [RCV001620720] Chr16:67842450 [GRCh38]
Chr16:67876353 [GRCh37]
Chr16:16q22.1
benign
NM_020457.3(THAP11):c.367CAG[9] (p.Gln132del) microsatellite THAP11-related condition [RCV003978183]|not provided [RCV000948981] Chr16:67842921..67842923 [GRCh38]
Chr16:67876824..67876826 [GRCh37]
Chr16:16q22.1
benign
GRCh37/hg19 16q21-22.1(chr16:65669673-70180183)x1 copy number loss not provided [RCV001006797] Chr16:65669673..70180183 [GRCh37]
Chr16:16q21-22.1
pathogenic
NM_025082.4(CENPT):c.-492+5283C>T single nucleotide variant not provided [RCV001674276] Chr16:67842118 [GRCh38]
Chr16:67876021 [GRCh37]
Chr16:16q22.1
benign
GRCh37/hg19 16q21-24.3(chr16:61524229-90155062)x3 copy number gain not provided [RCV001249359] Chr16:61524229..90155062 [GRCh37]
Chr16:16q21-24.3
not provided
GRCh37/hg19 16q22.1(chr16:67765964-68246270)x1 copy number loss not provided [RCV001259860] Chr16:67765964..68246270 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.478C>T (p.Leu160Phe) single nucleotide variant Inborn genetic diseases [RCV003197148] Chr16:67843032 [GRCh38]
Chr16:67876935 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.694G>A (p.Val232Ile) single nucleotide variant not provided [RCV001988330] Chr16:67843248 [GRCh38]
Chr16:67877151 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.404C>T (p.Pro135Leu) single nucleotide variant not provided [RCV001890339] Chr16:67842958 [GRCh38]
Chr16:67876861 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.257A>G (p.Asn86Ser) single nucleotide variant not provided [RCV001941371] Chr16:67842811 [GRCh38]
Chr16:67876714 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.219G>A (p.Thr73=) single nucleotide variant not provided [RCV001941985] Chr16:67842773 [GRCh38]
Chr16:67876676 [GRCh37]
Chr16:16q22.1
likely benign
NC_000016.9:g.(?_66545871)_(72146396_?)dup duplication Dyskeratosis congenita, autosomal dominant 6 [RCV001900384]|Immunodeficiency [RCV001900385]|not provided [RCV001900386] Chr16:66545871..72146396 [GRCh37]
Chr16:16q21-22.2
uncertain significance
NM_020457.3(THAP11):c.366_392del (p.Gln124_Gln132del) deletion not provided [RCV002046955] Chr16:67842903..67842929 [GRCh38]
Chr16:67876806..67876832 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.523C>G (p.Pro175Ala) single nucleotide variant not provided [RCV002010345] Chr16:67843077 [GRCh38]
Chr16:67876980 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.321ACAGCAGCAGCAGCAGCAACAGCAGCA[1] (p.Gln124_Gln132del) microsatellite not provided [RCV001916743] Chr16:67842867..67842893 [GRCh38]
Chr16:67876770..67876796 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.237C>T (p.Ile79=) single nucleotide variant not provided [RCV002148742] Chr16:67842791 [GRCh38]
Chr16:67876694 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.366_386del (p.Gln126_Gln132del) deletion not provided [RCV002187232] Chr16:67842903..67842923 [GRCh38]
Chr16:67876806..67876826 [GRCh37]
Chr16:16q22.1
benign
NM_020457.3(THAP11):c.339_362del (p.Gln125_Gln132del) deletion not provided [RCV002129358] Chr16:67842879..67842902 [GRCh38]
Chr16:67876782..67876805 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.366_389del (p.Gln125_Gln132del) deletion THAP11-related condition [RCV003933381]|not provided [RCV002111213] Chr16:67842903..67842926 [GRCh38]
Chr16:67876806..67876829 [GRCh37]
Chr16:16q22.1
benign|likely benign
NM_020457.3(THAP11):c.367CAG[6] (p.Gln129_Gln132del) microsatellite THAP11-related condition [RCV003958635]|not provided [RCV002088517] Chr16:67842921..67842932 [GRCh38]
Chr16:67876824..67876835 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.392_393insACAGCAGCAGCA (p.Gln129_Gln132dup) microsatellite not provided [RCV002088826] Chr16:67842935..67842936 [GRCh38]
Chr16:67876838..67876839 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.367CAG[12] (p.Gln131_Gln132dup) microsatellite THAP11-related condition [RCV003916318]|not provided [RCV002148549] Chr16:67842920..67842921 [GRCh38]
Chr16:67876823..67876824 [GRCh37]
Chr16:16q22.1
benign|likely benign
NM_020457.3(THAP11):c.312GCAGCAGCAACAGCAGCA[3] (p.Gln127_Gln132dup) microsatellite not provided [RCV002135329] Chr16:67842862..67842863 [GRCh38]
Chr16:67876765..67876766 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.367CAG[11] (p.Gln132dup) microsatellite THAP11-related condition [RCV003923726]|not provided [RCV002106236] Chr16:67842920..67842921 [GRCh38]
Chr16:67876823..67876824 [GRCh37]
Chr16:16q22.1
benign|likely benign
NM_020457.3(THAP11):c.135C>T (p.Val45=) single nucleotide variant not provided [RCV002076542] Chr16:67842689 [GRCh38]
Chr16:67876592 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.392_393insACAGCAGCAGCAGCAGCAGCA (p.Gln126_Gln132dup) microsatellite not provided [RCV002113000] Chr16:67842926..67842927 [GRCh38]
Chr16:67876829..67876830 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.367CAG[8] (p.Gln131_Gln132del) microsatellite not provided [RCV002077562] Chr16:67842921..67842926 [GRCh38]
Chr16:67876824..67876829 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.477C>T (p.Thr159=) single nucleotide variant not provided [RCV002115830] Chr16:67843031 [GRCh38]
Chr16:67876934 [GRCh37]
Chr16:16q22.1
benign
NM_020457.3(THAP11):c.369G>A (p.Gln123=) single nucleotide variant not provided [RCV002152240] Chr16:67842923 [GRCh38]
Chr16:67876826 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.367CAG[4] (p.Gln127_Gln132del) microsatellite not provided [RCV002147941] Chr16:67842921..67842938 [GRCh38]
Chr16:67876824..67876841 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.366_371dup (p.Gln131_Gln132dup) duplication not provided [RCV002209898] Chr16:67842914..67842915 [GRCh38]
Chr16:67876817..67876818 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.348A>G (p.Gln116=) single nucleotide variant THAP11-related condition [RCV003916329]|not provided [RCV002151912] Chr16:67842902 [GRCh38]
Chr16:67876805 [GRCh37]
Chr16:16q22.1
benign
NM_020457.3(THAP11):c.9C>G (p.Gly3=) single nucleotide variant THAP11-related condition [RCV003923734]|not provided [RCV002114286] Chr16:67842563 [GRCh38]
Chr16:67876466 [GRCh37]
Chr16:16q22.1
benign
NM_020457.3(THAP11):c.339ACAGCAGCA[1] (p.Gln130_Gln132del) microsatellite THAP11-related condition [RCV003923497]|not provided [RCV002197067] Chr16:67842885..67842893 [GRCh38]
Chr16:67876788..67876796 [GRCh37]
Chr16:16q22.1
benign|likely benign
NM_020457.3(THAP11):c.321A>G (p.Gln107=) single nucleotide variant THAP11-related condition [RCV003913795]|not provided [RCV002108971] Chr16:67842875 [GRCh38]
Chr16:67876778 [GRCh37]
Chr16:16q22.1
benign
NM_020457.3(THAP11):c.573A>G (p.Thr191=) single nucleotide variant not provided [RCV002121462] Chr16:67843127 [GRCh38]
Chr16:67877030 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.392_393insACAGCAGCAGCAGCAGCAGCAGCA (p.Gln125_Gln132dup) microsatellite not provided [RCV002120814] Chr16:67842923..67842924 [GRCh38]
Chr16:67876826..67876827 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.367CAG[7] (p.Gln130_Gln132del) microsatellite not provided [RCV002103288] Chr16:67842921..67842929 [GRCh38]
Chr16:67876824..67876832 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.441G>A (p.Pro147=) single nucleotide variant not provided [RCV002160143] Chr16:67842995 [GRCh38]
Chr16:67876898 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.366A>G (p.Gln122=) single nucleotide variant not provided [RCV002161035] Chr16:67842920 [GRCh38]
Chr16:67876823 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.366_392dup (p.Gln124_Gln132dup) duplication THAP11-related condition [RCV003923631]|not provided [RCV002122946] Chr16:67842902..67842903 [GRCh38]
Chr16:67876805..67876806 [GRCh37]
Chr16:16q22.1
benign|likely benign
NM_020457.3(THAP11):c.426T>C (p.Thr142=) single nucleotide variant not provided [RCV002163165] Chr16:67842980 [GRCh38]
Chr16:67876883 [GRCh37]
Chr16:16q22.1
likely benign
GRCh37/hg19 16q11.2-24.3(chr16:46503968-90155062)x3 copy number gain not provided [RCV002221458] Chr16:46503968..90155062 [GRCh37]
Chr16:16q11.2-24.3
pathogenic
NM_020457.3(THAP11):c.367CAG[13] (p.Gln130_Gln132dup) microsatellite not provided [RCV002083958] Chr16:67842920..67842921 [GRCh38]
Chr16:67876823..67876824 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.18C>T (p.Cys6=) single nucleotide variant THAP11-related condition [RCV003911215]|not provided [RCV002182456] Chr16:67842572 [GRCh38]
Chr16:67876475 [GRCh37]
Chr16:16q22.1
benign|likely benign
NC_000016.9:g.(?_65821800)_(72146396_?)del deletion Dyskeratosis congenita, autosomal dominant 6 [RCV003122496] Chr16:65821800..72146396 [GRCh37]
Chr16:16q21-22.2
uncertain significance
NM_020457.3(THAP11):c.509C>A (p.Pro170Gln) single nucleotide variant not provided [RCV002261531] Chr16:67843063 [GRCh38]
Chr16:67876966 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.120G>A (p.Val40=) single nucleotide variant not provided [RCV002967762] Chr16:67842674 [GRCh38]
Chr16:67876577 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.351GCA[3] (p.Gln131_Gln132del) microsatellite not provided [RCV002994329] Chr16:67842903..67842908 [GRCh38]
Chr16:67876806..67876811 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.360G>A (p.Gln120=) single nucleotide variant not provided [RCV002904026] Chr16:67842914 [GRCh38]
Chr16:67876817 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.298G>T (p.Ala100Ser) single nucleotide variant Inborn genetic diseases [RCV002979968]|not provided [RCV002995981] Chr16:67842852 [GRCh38]
Chr16:67876755 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.921C>T (p.Val307=) single nucleotide variant not provided [RCV002902931] Chr16:67843475 [GRCh38]
Chr16:67877378 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.351GCA[7] (p.Gln132_Ser133insGlnGln) microsatellite THAP11-related condition [RCV003916673]|not provided [RCV002975158] Chr16:67842902..67842903 [GRCh38]
Chr16:67876805..67876806 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.620C>G (p.Ala207Gly) single nucleotide variant Inborn genetic diseases [RCV002684323] Chr16:67843174 [GRCh38]
Chr16:67877077 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.38A>G (p.Asn13Ser) single nucleotide variant Inborn genetic diseases [RCV003357982]|not provided [RCV002691008] Chr16:67842592 [GRCh38]
Chr16:67876495 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.348ACAGCAGCAGCAGCAGCA[1] (p.Gln127_Gln132del) microsatellite THAP11-related condition [RCV003943567]|not provided [RCV002914034] Chr16:67842894..67842911 [GRCh38]
Chr16:67876797..67876814 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.339_359dup (p.Gln132_Ser133insGlnGlnGlnGlnGlnGlnGln) duplication not provided [RCV002572005] Chr16:67842881..67842882 [GRCh38]
Chr16:67876784..67876785 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.348A>C (p.Gln116His) single nucleotide variant not provided [RCV002593148] Chr16:67842902 [GRCh38]
Chr16:67876805 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.367CAG[19] (p.Gln132_Ser133insGlnGlnGlnGlnGlnGlnGlnGlnGln) microsatellite not provided [RCV002999306] Chr16:67842920..67842921 [GRCh38]
Chr16:67876823..67876824 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.366_395del (p.Gln123_Gln132del) deletion not provided [RCV003079504] Chr16:67842903..67842932 [GRCh38]
Chr16:67876806..67876835 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.394_395delinsTC (p.Gln132Ser) indel not provided [RCV003080710] Chr16:67842948..67842949 [GRCh38]
Chr16:67876851..67876852 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.240C>T (p.Phe80=) single nucleotide variant not provided [RCV002913909] Chr16:67842794 [GRCh38]
Chr16:67876697 [GRCh37]
Chr16:16q22.1
benign
NM_020457.3(THAP11):c.348_350del (p.Gln132del) deletion not provided [RCV002926759] Chr16:67842900..67842902 [GRCh38]
Chr16:67876803..67876805 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.324GCA[1] (p.Gln129_Gln132del) microsatellite not provided [RCV002699983] Chr16:67842876..67842887 [GRCh38]
Chr16:67876779..67876790 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.367CAG[18] (p.Gln132_Ser133insGlnGlnGlnGlnGlnGlnGlnGln) microsatellite not provided [RCV002766190] Chr16:67842920..67842921 [GRCh38]
Chr16:67876823..67876824 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.357G>A (p.Gln119=) single nucleotide variant not provided [RCV002957935] Chr16:67842911 [GRCh38]
Chr16:67876814 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.333_334insAAGCAACAG (p.Gln111_Gln112insLysGlnGln) insertion not provided [RCV002595462] Chr16:67842884..67842885 [GRCh38]
Chr16:67876787..67876788 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.448G>C (p.Val150Leu) single nucleotide variant not provided [RCV002597020] Chr16:67843002 [GRCh38]
Chr16:67876905 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.321_335dup (p.Gln132_Ser133insGlnGlnGlnGlnGln) duplication not provided [RCV003042350] Chr16:67842862..67842863 [GRCh38]
Chr16:67876765..67876766 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.415A>G (p.Thr139Ala) single nucleotide variant not provided [RCV002786399] Chr16:67842969 [GRCh38]
Chr16:67876872 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.347_348insGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCA (p.Gln132_Ser133insGlnGlnGlnGlnGlnGlnGlnGlnGlnGlnGlnGlnGlnGlnGlnGlnGlnGln) insertion not provided [RCV003042977] Chr16:67842875..67842876 [GRCh38]
Chr16:67876778..67876779 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.321_329dup (p.Gln132_Ser133insGlnGlnGln) duplication not provided [RCV002958648] Chr16:67842866..67842867 [GRCh38]
Chr16:67876769..67876770 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.366_374del (p.Gln130_Gln132del) deletion not provided [RCV002596060] Chr16:67842912..67842920 [GRCh38]
Chr16:67876815..67876823 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.395A>C (p.Gln132Pro) single nucleotide variant Inborn genetic diseases [RCV002984423] Chr16:67842949 [GRCh38]
Chr16:67876852 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.348_377del (p.Gln123_Gln132del) deletion not provided [RCV002919027] Chr16:67842894..67842923 [GRCh38]
Chr16:67876797..67876826 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.321_329del (p.Gln130_Gln132del) deletion not provided [RCV002644187] Chr16:67842867..67842875 [GRCh38]
Chr16:67876770..67876778 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.383_384insACAGCAGCAGCAGCA (p.Gln132_Ser133insGlnGlnGlnGlnGln) microsatellite not provided [RCV002957936] Chr16:67842923..67842924 [GRCh38]
Chr16:67876826..67876827 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.502C>G (p.Gln168Glu) single nucleotide variant Inborn genetic diseases [RCV002915918]|not provided [RCV003777942] Chr16:67843056 [GRCh38]
Chr16:67876959 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.348ACAGCAGCAGCAGCAGCA[3] (p.Gln132_Ser133insGlnGlnGlnGlnGlnGln) microsatellite not provided [RCV002938931] Chr16:67842893..67842894 [GRCh38]
Chr16:67876796..67876797 [GRCh37]
Chr16:16q22.1
likely benign|uncertain significance
NM_020457.3(THAP11):c.321ACAGCAGCAGCAGCAGCAACAGCAGCA[3] (p.Gln132_Ser133insGlnGlnGlnGlnGlnGlnGlnGlnGln) microsatellite not provided [RCV003087049] Chr16:67842866..67842867 [GRCh38]
Chr16:67876769..67876770 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.359_360insACA (p.Gln132_Ser133insGln) insertion not provided [RCV002959214] Chr16:67842911..67842912 [GRCh38]
Chr16:67876814..67876815 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.398C>T (p.Ser133Phe) single nucleotide variant not provided [RCV003046463] Chr16:67842952 [GRCh38]
Chr16:67876855 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.321_326dup (p.Gln132_Ser133insGlnGln) duplication not provided [RCV003086256] Chr16:67842869..67842870 [GRCh38]
Chr16:67876772..67876773 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.366_380del (p.Gln128_Gln132del) deletion not provided [RCV003089566] Chr16:67842906..67842920 [GRCh38]
Chr16:67876809..67876823 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.374_375insACAGCAGCAGCAGCAGCAACAGCA (p.Gln132_Ser133insGlnGlnGlnGlnGlnGlnGlnGln) insertion not provided [RCV003088582] Chr16:67842923..67842924 [GRCh38]
Chr16:67876826..67876827 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.347_348insGCAGCAGCAGCAGCAGCAACAGCAGCA (p.Gln132_Ser133insGlnGlnGlnGlnGlnGlnGlnGlnGln) microsatellite not provided [RCV003090536] Chr16:67842875..67842876 [GRCh38]
Chr16:67876778..67876779 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.722G>A (p.Gly241Asp) single nucleotide variant not provided [RCV002671803] Chr16:67843276 [GRCh38]
Chr16:67877179 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.339ACAGCAGCA[3] (p.Gln132_Ser133insGlnGlnGln) microsatellite not provided [RCV002647266] Chr16:67842884..67842885 [GRCh38]
Chr16:67876787..67876788 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.397T>C (p.Ser133Pro) single nucleotide variant not provided [RCV002598544] Chr16:67842951 [GRCh38]
Chr16:67876854 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.395_397del (p.Gln132_Ser133delinsPro) deletion not provided [RCV002658292] Chr16:67842949..67842951 [GRCh38]
Chr16:67876852..67876854 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.356_357insACAGCA (p.Gln132_Ser133insGlnGln) insertion not provided [RCV003072184] Chr16:67842905..67842906 [GRCh38]
Chr16:67876808..67876809 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.446T>C (p.Leu149Pro) single nucleotide variant not provided [RCV003569772] Chr16:67843000 [GRCh38]
Chr16:67876903 [GRCh37]
Chr16:16q22.1
uncertain significance
GRCh37/hg19 16q22.1(chr16:67498380-68754276)x3 copy number gain not provided [RCV003485117] Chr16:67498380..68754276 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.381G>A (p.Gln127=) single nucleotide variant not provided [RCV003426747] Chr16:67842935 [GRCh38]
Chr16:67876838 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.574G>A (p.Val192Met) single nucleotide variant not provided [RCV003571946] Chr16:67843128 [GRCh38]
Chr16:67877031 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.383_384insACAGCAGCA (p.Gln132_Ser133insGlnGlnGln) microsatellite not provided [RCV003715492] Chr16:67842929..67842930 [GRCh38]
Chr16:67876832..67876833 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.347_348insGCAGCAGCAACAGCAGCAGCA (p.Gln132_Ser133insGlnGlnGlnGlnGlnGlnGln) microsatellite not provided [RCV003546294] Chr16:67842893..67842894 [GRCh38]
Chr16:67876796..67876797 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.351GCA[6] (p.Gln132_Ser133insGln) microsatellite not provided [RCV003545735] Chr16:67842902..67842903 [GRCh38]
Chr16:67876805..67876806 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.339A>G (p.Gln113=) single nucleotide variant not provided [RCV003545895] Chr16:67842893 [GRCh38]
Chr16:67876796 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.309GCA[1] (p.Gln130_Gln132del) microsatellite not provided [RCV003550033] Chr16:67842863..67842871 [GRCh38]
Chr16:67876766..67876774 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.690G>C (p.Val230=) single nucleotide variant not provided [RCV003725985] Chr16:67843244 [GRCh38]
Chr16:67877147 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.348_353del (p.Gln131_Gln132del) deletion not provided [RCV003697610] Chr16:67842897..67842902 [GRCh38]
Chr16:67876800..67876805 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.225C>G (p.Arg75=) single nucleotide variant not provided [RCV003726350] Chr16:67842779 [GRCh38]
Chr16:67876682 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.367CAG[5] (p.Gln128_Gln132del) microsatellite THAP11-related condition [RCV003946656]|not provided [RCV003548314] Chr16:67842921..67842935 [GRCh38]
Chr16:67876824..67876838 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.375G>A (p.Gln125=) single nucleotide variant not provided [RCV003816823] Chr16:67842929 [GRCh38]
Chr16:67876832 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.312GCAGCAGCAACAGCAGCA[1] (p.Gln127_Gln132del) microsatellite not provided [RCV003700279] Chr16:67842863..67842880 [GRCh38]
Chr16:67876766..67876783 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.366_368del (p.Gln132del) deletion not provided [RCV003700340] Chr16:67842918..67842920 [GRCh38]
Chr16:67876821..67876823 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.392_393insACAGCAGCA (p.Gln132_Ser133insGlnGlnGln) microsatellite not provided [RCV003847553] Chr16:67842938..67842939 [GRCh38]
Chr16:67876841..67876842 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.364_396del (p.Gln122_Gln132del) deletion not provided [RCV003731816] Chr16:67842903..67842935 [GRCh38]
Chr16:67876806..67876838 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.386_387insACAGCAGCAGCAGCAGCA (p.Gln132_Ser133insGlnGlnGlnGlnGlnGln) microsatellite not provided [RCV003735757] Chr16:67842923..67842924 [GRCh38]
Chr16:67876826..67876827 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.588T>C (p.Phe196=) single nucleotide variant not provided [RCV003711555] Chr16:67843142 [GRCh38]
Chr16:67877045 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.464C>G (p.Ala155Gly) single nucleotide variant not provided [RCV003676501] Chr16:67843018 [GRCh38]
Chr16:67876921 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.321_323del (p.Gln132del) deletion not provided [RCV003554057] Chr16:67842873..67842875 [GRCh38]
Chr16:67876776..67876778 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.81A>C (p.Pro27=) single nucleotide variant not provided [RCV003732985] Chr16:67842635 [GRCh38]
Chr16:67876538 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.351GCA[8] (p.Gln132_Ser133insGlnGlnGln) microsatellite not provided [RCV003871121] Chr16:67842902..67842903 [GRCh38]
Chr16:67876805..67876806 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.487A>T (p.Thr163Ser) single nucleotide variant not provided [RCV003554359] Chr16:67843041 [GRCh38]
Chr16:67876944 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.392_393insACAGCAGCAGCAGCAGCA (p.Gln132_Ser133insGlnGlnGlnGlnGlnGln) microsatellite not provided [RCV003728765] Chr16:67842929..67842930 [GRCh38]
Chr16:67876832..67876833 [GRCh37]
Chr16:16q22.1
uncertain significance
GRCh37/hg19 16q22.1(chr16:67583728-69977397)x3 copy number gain not specified [RCV003987175] Chr16:67583728..69977397 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.367CAG[15] (p.Gln132_Ser133insGlnGlnGlnGlnGln) microsatellite not provided [RCV003555740] Chr16:67842920..67842921 [GRCh38]
Chr16:67876823..67876824 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.324GCA[6] (p.Gln132_Ser133insGln) microsatellite not provided [RCV003564480] Chr16:67842875..67842876 [GRCh38]
Chr16:67876778..67876779 [GRCh37]
Chr16:16q22.1
uncertain significance
NM_020457.3(THAP11):c.321_332del (p.Gln129_Gln132del) deletion not provided [RCV003567495] Chr16:67842864..67842875 [GRCh38]
Chr16:67876767..67876778 [GRCh37]
Chr16:16q22.1
likely benign
NM_020457.3(THAP11):c.374_375insACAGCA (p.Gln132_Ser133insGlnGln) insertion not provided [RCV003555048] Chr16:67842923..67842924 [GRCh38]
Chr16:67876826..67876827 [GRCh37]
Chr16:16q22.1
likely benign
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:558
Count of miRNA genes:288
Interacting mature miRNAs:322
Transcripts:ENST00000303596
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
D16S667E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371667,876,686 - 67,876,893UniSTSGRCh37
Build 361666,434,187 - 66,434,394RGDNCBI36
Celera1652,385,098 - 52,385,305RGD
Cytogenetic Map16q22.1UniSTS
HuRef1653,749,697 - 53,749,904UniSTS
G20704  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371667,877,798 - 67,878,042UniSTSGRCh37
Build 361666,435,299 - 66,435,543RGDNCBI36
Celera1652,386,210 - 52,386,454RGD
Cytogenetic Map16q22.1UniSTS
HuRef1653,750,809 - 53,751,053UniSTS
A006C32  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371667,877,798 - 67,878,042UniSTSGRCh37
Build 361666,435,299 - 66,435,543RGDNCBI36
Celera1652,386,210 - 52,386,454RGD
Cytogenetic Map16q22.1UniSTS
HuRef1653,750,809 - 53,751,053UniSTS
GeneMap99-GB4 RH Map16408.42UniSTS
NCBI RH Map16508.6UniSTS
RH78543  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371667,877,697 - 67,877,847UniSTSGRCh37
Build 361666,435,198 - 66,435,348RGDNCBI36
Celera1652,386,109 - 52,386,259RGD
Cytogenetic Map16q22.1UniSTS
HuRef1653,750,708 - 53,750,858UniSTS
GeneMap99-GB4 RH Map16405.66UniSTS
NCBI RH Map16508.6UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 2421 2610 1524 441 1742 283 4352 2065 3298 381 1455 1602 172 1 1201 2787 6 2
Low 18 381 202 183 209 182 5 132 436 38 5 11 2 3 1
Below cutoff

Sequence


RefSeq Acc Id: ENST00000303596   ⟹   ENSP00000304689
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1667,842,320 - 67,844,195 (+)Ensembl
RefSeq Acc Id: NM_020457   ⟹   NP_065190
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381667,842,320 - 67,844,195 (+)NCBI
GRCh371667,876,213 - 67,878,098 (+)RGD
Build 361666,433,714 - 66,435,599 (+)NCBI Archive
Celera1652,384,625 - 52,386,510 (+)RGD
HuRef1653,749,224 - 53,751,109 (+)RGD
CHM1_11669,284,395 - 69,286,280 (+)NCBI
T2T-CHM13v2.01673,638,094 - 73,639,969 (+)NCBI
Sequence:
RefSeq Acc Id: NP_065190   ⟸   NM_020457
- UniProtKB: A8K002 (UniProtKB/Swiss-Prot),   A4UCT5 (UniProtKB/Swiss-Prot),   O94795 (UniProtKB/Swiss-Prot),   Q96EK4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSP00000304689   ⟸   ENST00000303596

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q96EK4-F1-model_v2 AlphaFold Q96EK4 1-314 view protein structure

Promoters
RGD ID:6793508
Promoter ID:HG_KWN:24055
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000268879
Position:
Human AssemblyChrPosition (strand)Source
Build 361666,433,231 - 66,434,742 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:23194 AgrOrtholog
COSMIC THAP11 COSMIC
Ensembl Genes ENSG00000168286 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000303596 ENTREZGENE
  ENST00000303596.3 UniProtKB/Swiss-Prot
GTEx ENSG00000168286 GTEx
HGNC ID HGNC:23194 ENTREZGENE
Human Proteome Map THAP11 Human Proteome Map
InterPro THAP_Znf UniProtKB/Swiss-Prot
KEGG Report hsa:57215 UniProtKB/Swiss-Prot
NCBI Gene 57215 ENTREZGENE
OMIM 609119 OMIM
PANTHER THAP DOMAIN PROTEIN 11 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  THAP DOMAIN-CONTAINING PROTEIN 11 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam THAP UniProtKB/Swiss-Prot
PharmGKB PA134979842 PharmGKB
PROSITE ZF_THAP UniProtKB/Swiss-Prot
SMART DM3 UniProtKB/Swiss-Prot
  THAP UniProtKB/Swiss-Prot
Superfamily-SCOP Glucocorticoid receptor-like (DNA-binding domain) UniProtKB/Swiss-Prot
UniProt A4UCT5 ENTREZGENE
  A8K002 ENTREZGENE
  B5APZ3_HUMAN UniProtKB/TrEMBL
  O94795 ENTREZGENE
  Q96EK4 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary A4UCT5 UniProtKB/Swiss-Prot
  A8K002 UniProtKB/Swiss-Prot
  O94795 UniProtKB/Swiss-Prot