PPIAP65 (peptidylprolyl isomerase A pseudogene 65) - Rat Genome Database

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Gene: PPIAP65 (peptidylprolyl isomerase A pseudogene 65) Homo sapiens
Analyze
Symbol: PPIAP65
Name: peptidylprolyl isomerase A pseudogene 65
RGD ID: 13209040
HGNC Page HGNC:53689
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: PPIA  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382129,496,297 - 129,496,788 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2129,496,297 - 129,496,788 (+)EnsemblGRCh38hg38GRCh38
GRCh372130,253,870 - 130,254,361 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map2q21.1NCBI
T2T-CHM13v2.02129,924,530 - 129,925,021 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:150
Count of miRNA genes:145
Interacting mature miRNAs:150
Transcripts:ENST00000418508
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium 1
Low 9 3 47 28 53 28 26 2 15 43 39 60 4
Below cutoff 286 308 234 73 196 51 632 197 554 122 381 305 25 135 382

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000418508
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2129,496,297 - 129,496,788 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC PPIAP65 COSMIC
Ensembl Genes ENSG00000233428 Ensembl, ENTREZGENE
GTEx ENSG00000233428 GTEx
HGNC ID HGNC:53689 ENTREZGENE
Human Proteome Map PPIAP65 Human Proteome Map
NCBI Gene PPIAP65 ENTREZGENE