Tfr2 (transferrin receptor 2) - Rat Genome Database

Name: Tfr2
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Advanced Search (OLGA)

Gene: Tfr2 (transferrin receptor 2) Mus musculus

Analyze

Symbol:

Tfr2

Name:

transferrin receptor 2

RGD ID:

1320888

MGI Page

MGI

Description:

Predicted to enable co-receptor binding activity and transferrin receptor activity. Acts upstream of or within multicellular organismal-level iron ion homeostasis. Part of HFE-transferrin receptor complex. Is expressed in liver lobe; mesonephros; and urinary system. Used to study hemochromatosis type 3. Human ortholog(s) of this gene implicated in hemochromatosis and hemochromatosis type 3. Orthologous to human TFR2 (transferrin receptor 2).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Tfr; transferrin receptor protein 2; Trf; Trfr2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TFR2 (transferrin receptor 2)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Tfr2 (transferrin receptor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tfr2 (transferrin receptor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TFR2 (transferrin receptor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TFR2 (transferrin receptor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tfr2 (transferrin receptor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TFR2 (transferrin receptor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TFR2 (transferrin receptor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tfr2 (transferrin receptor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Tfr2 (transferrin receptor 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	TFR2 (transferrin receptor 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	tfr2 (transferrin receptor 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Saccharomyces cerevisiae (baker's yeast):	TRE1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|PANTHER\|PhylomeDB)
Saccharomyces cerevisiae (baker's yeast):	TRE2	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	137,568,127 - 137,586,344 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	137,568,102 - 137,585,743 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	137,569,822 - 137,588,081 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	137,569,840 - 137,587,481 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	138,011,079 - 138,028,709 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	137,800,593 - 137,817,260 (+)	NCBI		MGSCv36	mm8
Celera	5	134,553,519 - 134,571,033 (+)	NCBI		Celera
Cytogenetic Map	5	G2	NCBI
cM Map	5	76.57	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

acute myeloid leukemia (ISO)

beta thalassemia (IEP,ISO)

genetic disease (ISO)

hemochromatosis (ISO)

hemochromatosis type 1 (ISO)

hemochromatosis type 3 (IAGP,ISO)

hemochromatosis type 5 (ISO)

pleomorphic xanthoastrocytoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (EXP)

1,1-dichloroethene (EXP)

17beta-estradiol (EXP,ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (EXP)

2,4-dinitrotoluene (ISO)

2-butoxyethanol (EXP)

4,4'-diaminodiphenylmethane (EXP)

4,4'-sulfonyldiphenol (ISO)

acetamide (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (EXP)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (EXP,ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

cadmium dichloride (ISO)

carbon nanotube (EXP)

CGS 15943 (ISO)

chromium(6+) (ISO)

clofibrate (EXP)

copper atom (ISO)

copper(0) (ISO)

Cuprizon (ISO)

cyclosporin A (ISO)

desferrioxamine B (ISO)

Dibutyl phosphate (ISO)

dioxygen (EXP)

dorsomorphin (ISO)

epoxiconazole (EXP)

ferric ammonium citrate (ISO)

flutamide (ISO)

fumonisin B1 (EXP)

furan (ISO)

glafenine (ISO)

glycidol (ISO)

iron atom (EXP,ISO)

iron dextran (EXP)

iron(0) (EXP,ISO)

kenpaullone (ISO)

leflunomide (ISO)

methapyrilene (ISO)

mono(2-ethylhexyl) phthalate (EXP)

monosodium L-glutamate (EXP)

N-methyl-4-phenylpyridinium (EXP)

N-nitrosodiethylamine (EXP)

N-Nitrosopyrrolidine (ISO)

nickel dichloride (EXP)

nickel sulfate (ISO)

nitrofen (ISO)

oxaliplatin (ISO)

paracetamol (EXP)

PCB138 (ISO)

perfluorooctane-1-sulfonic acid (EXP)

phenethyl isothiocyanate (ISO)

pirinixic acid (EXP)

potassium chromate (ISO)

potassium dichromate (EXP)

quercetin (ISO)

resveratrol (ISO)

SB 431542 (ISO)

sotorasib (ISO)

tetrachloromethane (ISO)

thioacetamide (ISO)

tolcapone (ISO)

topotecan (ISO)

trametinib (ISO)

trichloroethene (ISO)

triptonide (EXP)

valproic acid (EXP,ISO)

vinclozolin (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

acute-phase response (ISO)

cellular response to iron ion (ISO)

endocytic iron import into cell (IBA,ISO)

intracellular iron ion homeostasis (ISO,TAS)

multicellular organismal-level iron ion homeostasis (IMP,ISO)

positive regulation of endocytosis (ISO)

positive regulation of peptide hormone secretion (ISO)

positive regulation of protein maturation (ISO)

positive regulation of transcription by RNA polymerase II (ISO)

receptor-mediated endocytosis (ISO)

response to iron ion (ISO)

transferrin transport (ISO)

Cellular Component

cytoplasm (IEA)

cytoplasmic vesicle (ISO)

external side of plasma membrane (IBA,ISO)

HFE-transferrin receptor complex (IDA,ISO)

membrane (ISA)

plasma membrane (ISO)

Molecular Function

co-receptor binding (ISO)

protein binding (IPI)

transferrin receptor activity (ISO,TAS)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal colon morphology (IEA)

abnormal erythrocyte cell number (IEA)

abnormal heart morphology (IEA)

abnormal hemoglobin content (IEA)

abnormal iron homeostasis (IAGP)

abnormal liver morphology (IEA)

abnormal mean corpuscular hemoglobin (IEA)

abnormal mean corpuscular hemoglobin concentration (IEA)

abnormal mean corpuscular volume (IEA)

abnormal rectum morphology (IEA)

decreased body weight (IAGP)

decreased erythrocyte cell number (IEA)

decreased spleen iron level (IAGP)

enlarged heart (IEA)

hemochromatosis (IAGP)

increased cellular hemoglobin content (IAGP)

increased circulating ferritin level (IEA)

increased circulating iron level (IAGP)

increased hemoglobin content (IAGP)

increased liver iron level (IAGP)

increased mean corpuscular hemoglobin (IEA)

increased mean corpuscular hemoglobin concentration (IEA)

increased mean corpuscular volume (IEA)

increased spleen iron level (IAGP)

macrocytic anemia (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	A novel rat model of hereditary hemochromatosis due to a mutation in transferrin receptor 2.	Bartnikas TB, etal., Comp Med. 2013 Apr;63(2):143-55.
2.	The gene TFR2 is mutated in a new type of haemochromatosis mapping to 7q22.	Camaschella C, etal., Nat Genet. 2000 May;25(1):14-5.
3.	Functional annotation of a full-length mouse cDNA collection.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
4.	MGDs mouse GO annotations	MGD data from the GO Consortium
5.	MGD IEA	MGD IEA
6.	Elevated levels of transferrin receptor 2 mRNA, not transferrin receptor 1 mRNA, are associated with increased survival in acute myeloid leukaemia.	Nakamaki T, etal., Br J Haematol. 2004 Apr;125(1):42-9.
7.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
8.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
9.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
10.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
11.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
12.	mRNA expression of iron regulatory genes in beta-thalassemia intermedia and beta-thalassemia major mouse models.	Weizer-Stern O, etal., Am J Hematol. 2006 Jul;81(7):479-83.

Additional References at PubMed

PMID:6641714	PMID:7567998	PMID:10349636	PMID:10681454	PMID:11042159	PMID:11076861	PMID:11239002	PMID:11535534	PMID:12134060	PMID:12477932	PMID:15124225	PMID:15192150
PMID:15319276	PMID:15345587	PMID:15489334	PMID:15684062	PMID:15951546	PMID:16141072	PMID:16141073	PMID:16602821	PMID:16893896	PMID:16935854	PMID:17241880	PMID:18094142
PMID:18561026	PMID:19254567	PMID:19824072	PMID:19924283	PMID:20133002	PMID:20177050	PMID:20179178	PMID:20231891	PMID:20634490	PMID:20826723	PMID:21245482	PMID:21267068
PMID:21408141	PMID:21873635	PMID:22244935	PMID:22383097	PMID:22460705	PMID:22858058	PMID:22960056	PMID:23333676	PMID:24155934	PMID:24658816	PMID:24703692	PMID:24880340
PMID:25403101	PMID:25499454	PMID:26527688	PMID:26608187	PMID:26707700	PMID:26880306	PMID:27169626	PMID:27477597	PMID:28540293	PMID:30209118	PMID:32054685	PMID:32083318
PMID:32325033	PMID:33180328	PMID:36071579	PMID:36746004	PMID:37349056	PMID:38214117	PMID:38355793

Genomics

Comparative Map Data

Tfr2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	137,568,127 - 137,586,344 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	137,568,102 - 137,585,743 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	137,569,822 - 137,588,081 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	137,569,840 - 137,587,481 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	138,011,079 - 138,028,709 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	137,800,593 - 137,817,260 (+)	NCBI		MGSCv36	mm8
Celera	5	134,553,519 - 134,571,033 (+)	NCBI		Celera
Cytogenetic Map	5	G2	NCBI
cM Map	5	76.57	NCBI

TFR2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	100,620,420 - 100,641,552 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	100,620,416 - 100,642,779 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	100,218,043 - 100,239,175 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	100,055,975 - 100,077,109 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	99,862,690 - 99,883,810	NCBI
Celera	7	94,947,821 - 94,968,950 (-)	NCBI		Celera
Cytogenetic Map	7	q22.1	NCBI
HuRef	7	94,849,520 - 94,870,648 (-)	NCBI		HuRef
CHM1_1	7	100,148,586 - 100,169,685 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	101,860,501 - 101,881,634 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	99,577,671 - 99,598,799 (-)	NCBI

Tfr2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	24,744,450 - 24,761,413 (-)	NCBI		GRCr8
mRatBN7.2	12	19,107,673 - 19,124,622 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	19,107,673 - 19,124,591 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	20,263,117 - 20,280,127 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	20,875,998 - 20,893,008 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	19,940,332 - 19,957,342 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	22,177,382 - 22,194,330 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	22,177,382 - 22,194,299 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	24,194,288 - 24,211,237 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	19,638,502 - 19,655,420 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	12	19,628,960 - 19,644,982 (+)	NCBI
Celera	12	20,912,852 - 20,929,749 (-)	NCBI		Celera
Cytogenetic Map	12	q12	NCBI

Tfr2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955573	272,289 - 291,668 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955573	272,315 - 289,227 (+)	NCBI	ChiLan1.0	ChiLan1.0

TFR2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	118,531,714 - 118,554,217 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	166,796,330 - 166,818,842 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	92,647,431 - 92,669,889 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	106,048,497 - 106,060,481 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	106,048,935 - 106,069,238 (-)	Ensembl	panpan1.1		panPan2

TFR2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	9,059,501 - 9,076,646 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	9,060,629 - 9,076,158 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	10,763,917 - 10,781,061 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	8,993,681 - 9,010,842 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	8,993,652 - 9,010,354 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	8,846,198 - 8,863,361 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	8,823,694 - 8,841,037 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	9,006,114 - 9,023,274 (+)	NCBI		UU_Cfam_GSD_1.0

Tfr2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	133,353,500 - 133,368,393 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936543	668,157 - 682,174 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936543	667,570 - 681,872 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TFR2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	8,539,320 - 8,578,763 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	8,539,316 - 8,553,993 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	7,934,261 - 7,948,960 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TFR2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	28	12,570,604 - 12,592,269 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	28	12,571,841 - 12,592,266 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666070	3,712,690 - 3,733,677 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tfr2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624740	16,452,504 - 16,466,781 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624740	16,451,520 - 16,469,393 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Tfr2
587 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	116
Count of miRNA genes:	110
Interacting mature miRNAs:	112
Transcripts:	ENSMUST00000031729
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
27226719	Tibw6_m	tibia width 6, proximal, 16 week (mouse)					5	72857343	139985755	Mouse
1301715	Elmaz2_m	elevated maze behavior 2 (mouse)			Not determined		5	125178229	141700466	Mouse
10412191	Bbaa24_m	B.burgdorferi-associated arthritis 24 (mouse)			Not determined		5	119945037	141700466	Mouse
13464143	Bbaa2b_m	B.burgdorferi-associated arthritis 2b (mouse)					5	133052969	140709801	Mouse
11528552	Scram1_m	spinal cord resistance to astrocytoma modifier 1 (mouse)					5	121455402	151758149	Mouse
1300827	Cora1_m	correlation in cytokine production 1 (mouse)			Not determined		5	115156883	149157015	Mouse
10412239	Alpq7_m	alcohol preference QTL 7 (mouse)			Not determined		5	104705939	138705939	Mouse
12880406	Jcdq2_m	joint cartilage degeneration QTL 2 (mouse)					5	129787831	151758149	Mouse
4141218	Ath24_m	atherosclerosis 24 (mouse)			Not determined			129520084	151758149	Mouse
1301363	Pbwg13_m	postnatal body weight growth 13 (mouse)			Not determined		5	125133457	151758149	Mouse
1301362	Prnr1_m	prion resistance 1 (mouse)			Not determined		5	89418876	146787935	Mouse
1300913	Bwefm_m	body weight females and males day 10 (mouse)			Not determined		5	109439348	143439459	Mouse
4141081	Nidd7k_m	Nidd7 on KK-A (mouse)			Not determined			119945037	149347326	Mouse
10043890	Trigq4_m	triglyceride QTL 4 (mouse)			Not determined		5	107906299	141906412	Mouse
1302079	Lbw3_m	lupus NZB x NZW 3 (mouse)			Not determined		5	124700335	151758149	Mouse
1301986	Bpq4_m	blood pressure QTL 4 (mouse)			Not determined		5	121555236	151758149	Mouse
1301857	Bglq14_m	body growth late QTL 14 (mouse)			Not determined		5	118948964	151758149	Mouse
10412202	Bbaa26_m	B.burgdorferi-associated arthritis 26 (mouse)			Not determined		5	104583688	138555455	Mouse
1301543	Hypch_m	hypercholesterolemia (mouse)			Not determined		5	109238624	139118905	Mouse
4142473	Chlq11_m	circulating hormone level QTL 11 (mouse)			Not determined		5	107906299	141906412	Mouse
13464251	Ahl21_m	age related hearing loss, early onset 21 (mouse)					5	109167240	143167381	Mouse
11341716	Rvfs3_m	Rift Valley fever susceptibility 3 (mouse)					5	26441234	138455402	Mouse
1301226	Bbaa2_m	B.burgdorferi-associated arthritis 2 (mouse)			Not determined		5	115156883	149157015	Mouse
10412197	Bbaa25_m	B.burgdorferi-associated arthritis 25 (mouse)			Not determined		5	109167240	143167381	Mouse
1301102	Cia14_m	collagen induced arthritis 14 (mouse)			Not determined		5	113320385	138555455	Mouse
11049557	Lmr26_m	leishmaniasis resistance 26 (mouse)					5	133925558	151758149	Mouse
13464243	Ahl20_m	age related hearing loss, early onset 20 (mouse)					5	107906299	141906412	Mouse

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001289507	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001289509	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001289511	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001359206	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001425505	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001425506	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001425507	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_015799	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC148018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF207741	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF207742	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF222895	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF312033	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK004848	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK004965	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK155526	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK165320	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AV027736	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BB736789	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC013654	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY199481	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466529	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000031729 ⟹ ENSMUSP00000031729

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	137,568,113 - 137,585,743 (+)	Ensembl
GRCm38.p6 Ensembl	5	137,569,851 - 137,587,481 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000196375 ⟹ ENSMUSP00000142731

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	137,577,155 - 137,579,094 (+)	Ensembl
GRCm38.p6 Ensembl	5	137,578,893 - 137,580,832 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000196450

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	137,581,547 - 137,582,371 (+)	Ensembl
GRCm38.p6 Ensembl	5	137,583,285 - 137,584,109 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000196471 ⟹ ENSMUSP00000142814

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	137,568,982 - 137,585,727 (+)	Ensembl
GRCm38.p6 Ensembl	5	137,570,720 - 137,587,465 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000197705

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	137,572,777 - 137,576,037 (+)	Ensembl
GRCm38.p6 Ensembl	5	137,574,515 - 137,577,775 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000198783 ⟹ ENSMUSP00000142502

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	137,569,067 - 137,585,738 (+)	Ensembl
GRCm38.p6 Ensembl	5	137,570,805 - 137,587,476 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000198866 ⟹ ENSMUSP00000142720

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	137,568,102 - 137,585,741 (+)	Ensembl
GRCm38.p6 Ensembl	5	137,569,840 - 137,587,479 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000199054 ⟹ ENSMUSP00000142478

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	137,568,131 - 137,585,741 (+)	Ensembl
GRCm38.p6 Ensembl	5	137,569,869 - 137,587,479 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000199069

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	137,581,547 - 137,585,251 (+)	Ensembl
GRCm38.p6 Ensembl	5	137,583,285 - 137,586,989 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000199957

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	137,569,713 - 137,572,684 (+)	Ensembl
GRCm38.p6 Ensembl	5	137,571,451 - 137,574,422 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000200190

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	137,568,126 - 137,569,624 (+)	Ensembl
GRCm38.p6 Ensembl	5	137,569,864 - 137,571,362 (+)	Ensembl

RefSeq Acc Id:

NM_001289507 ⟹ NP_001276436

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	137,569,237 - 137,586,344 (+)	NCBI
GRCm38	5	137,570,975 - 137,588,081 (+)	NCBI
Celera	5	134,553,508 - 134,571,633 (+)	NCBI

Sequence:

show sequence

GGACTACTTGCAGAGTTCAGGAGGGGGCACAAGCATGGAGCAACGTTGGGGTCTACTTCGGAGA
GTGCAACAGTGGTCCCCAAGACCCTCTCAGACCATCTACAGACGCGTGGAAGGCCCTCAGCTGG
AGCACCTGGAGGAGGAAGACAGGGAGGAAGGGGCGGAGCTTCCTGCCCAGTTCTGCCCCATGGA
ACTCAAAGGCCCTGAGCACTTAGGCTCCTGTCCCGGGAGGTCAATTCCCATACCCTGGGCTGCA
GCAGGTCGAAAGGCTGCCCCCTATCTGGTCCTGATCACCCTGCTAATCTTCACTGGGGCCTTCC
TCCTAGGCTACGTGGCCTTTCGAGGGTCCTGCCAGGCGTGTGGGGACTCCGTGTTGGTGGTCGA
TGAAGATGTCAACCCTGAGGACTCCGGCCGGACCACGTTGTACTGGAGCGACCTCCAGGCCATG
TTTCTCCGGTTCCTTGGGGAGGGGCGCATGGAAGACACCATCAGGCTGACCAGCCTCCGGGAAC
GCGTGGCTGGCTCAGCCAGAATGGCCACCCTGGTCCAAGATATCCTCGATAAGCTCTCGCGCCA
GAAGCTGGACCACGTGTGGACTGACACGCACTACGTGGGACTTCAGTTCCCAGATCCGGCTCAC
GCTAACACCCTGCACTGGGTGGATGCAGACGGGAGCGTCCAGGAGCAGCTACCGCTGGAGGATC
CGGAAGTCTACTGTCCCTACAGCGCCACCGGCAACGCCACGGGCAAGCTGGTGTACGCCCACTA
CGGGCGGTCGGAGGACCTACAGGACCTAAAAGCCAAGGGCGTGGAGCTGGCCGGCAGCCTCCTG
CTAGTGCGAGTTGGAATTACTAGCTTCGCCCAGAAGGTAGCCGTTGCCCAGGACTTTGGGGCTC
AAGGAGTGCTGATATACCCTGACCCATCAGACTTCTCCCAGGATCCCCACAAGCCAGGCCTGTC
TAGCCACCAGGCTGTGTACGGACATGTGCACCTGGGAACTGGAGACCCTTACACACCTGGCTTC
CCGTCCTTCAATCAAACCCAGTTCCCTCCAGTAGAATCATCAGGCCTTCCCAGCATCCCCGCCC
AGCCCATCAGTGCTGACATTGCTGATCAATTGCTCAGGAAACTCACAGGCCCCGTGGCTCCCCA
GGAGTGGAAAGGTCACCTCTCAGGCTCTCCTTATCGGCTGGGACCTGGGCCCGACTTACGCCTT
GTGGTCAACAACCACAGAGTCTCTACCCCCATCAGTAACATCTTTGCGTGCATCGAGGGCTTTG
CAGAGCCAGATCACTATGTTGTCATTGGGGCCCAGAGGGATGCATGGGGCCCAGGAGCAGCCAA
GTCTGCAGTGGGGACTGCCATCCTGCTGGAGCTGGTTCGGACCTTCTCTTCCATGGTCAGCAAT
GGGTTCAGACCTCGAAGAAGTCTTTTGTTCATCAGCTGGGACGGAGGTGACTTTGGCAGCGTGG
GAGCCACAGAGTGGTTGGAGGGCTACCTCAGCGTGCTACACCTCAAAGCTGTTGTGTACGTGAG
CCTGGACAACTCCGTGTTGGGAGATGGCAAATTCCATGCTAAGACCAGCCCCCTTCTCGTCAGC
CTCATTGAGAATATCTTGAAGCAGGTGGACTCCCCTAACCATAGTGGACAGACCCTCTATGAAC
AAGTGGCACTCACCCACCCCAGCTGGGATGCTGAAGTGATTCAGCCCCTGCCCATGGACAGCAG
TGCATATTCCTTCACAGCCTTTGCGGGGGTCCCAGCTGTGGAGTTCTCCTTCATGGAGGATGAT
CGGGTGTACCCATTCCTGCACACGAAGGAGGACACATATGAGAATCTGCACAAGATGCTGCGAG
GTCGCCTGCCCGCCGTGGTCCAGGCAGTGGCTCAGCTCGCGGGCCAGCTCCTCATCCGACTGAG
CCACGATCACCTACTGCCGCTAGACTTCGGCCGCTATGGAGACGTGGTTCTCAGGCACATCGGC
AACCTCAATGAGTTCTCTGGGGACCTCAAGGAGCGCGGGCTGACCCTGCAGTGGGTGTACTCTG
CAAGGGGGGACTACATCCGTGCGGCGGAAAAGCTGCGGAAGGAGATTTACAGCTCGGAGCGGAA
CGATGAGCGTCTGATGCGCATGTACAACGTGCGCATCATGAGGGTGGAGTTCTACTTCCTGTCC
CAGTATGTGTCGCCAGCCGACTCCCCATTCCGCCACATTTTCCTAGGCCAAGGCGACCACACTT
TGGGTGCCCTGGTAGACCACCTGCGGATGCTGCGCGCCGATGGCTCAGGAGCCGCCTCTTCCCG
GTTGACAGCAGGTCTGGGCTTCCAGGAGAGTCGCTTCCGGCGCCAGCTGGCGCTGCTCACCTGG
ACACTGCAGGGGGCAGCCAACGCTCTCAGTGGCGACGTTTGGAACATTGACAATAACTTTTGAA
GCCAAAAGCCCTCCATGGGCCCCACGTGATTCTCCTTTCTCCCTCTTTGAGTGGTGCAGGCAAA
GGAGGTGCCTGAGATTGTAACCTATTCTTAACACCCTTGGTCCTGCAATGCTGGTGCGCCATAT
TTTCTCAGTGTGGTTGTCATGCCGTTGCTTACCCAGAAAGCGGTTTTCTTCCCATCACAGGCCC
TTCTGTCTTCAGGAGCAAAGTTCCCCATATCTAGAGACTATCTAGATGCTGGGATCTGATCAGC
TCTCTTAGAGAGTGAGATGGACAGCGTCATTATTTTATGACACATGAGCTACGGTATGTGAGCA
GCCCAAGGGGATTAGATGTCAATAAACCAATTGTAACCCCTGTTGTCCATACGCAATTTAGCTT
CCTCTTCATGCCGTACCCACTCCTCATATCCGCCTTGAGACTAGGGAAGAAGGCACAGAAGGCA
CCTGACAGCATGCTTGCAAGATGCTATCCACATGGGAAAAATAACTGTTCTGATGTCTAAGAAA
ACTGCCTAAAGATAATGGATAGGAGGTGGGGCAGTGGGGATAACTCATCAGGAATGGGTGATTG
CGGCCAAGCCTGATGACCTGAGTTTAATCCCCAGGACCAACATGGCAAAAGGAGAGAACTAGTT
CCCACAAGTTTTCCTATATCCTCCAAATGTATGCCCATAAAAGCACAAATAGATAAATGTTTTT
GCTTTTGTTTTTTAAAGTGGCTTTGTGGTTAAGAGCACTGGATGCCATTCTAGAAGACACCGGT
TCGATTCCCAGCACCCACATGGCCGCTTACAACTGTCTGTAACTCCAGTTGCTGGGGATCAGAT
GCCCTCTTCTGGTATGGTGTACGACTGCATGCATGTAGTATACATACAAGCAGGCAAAATACCC
ATACATGTAAAATTTTTAAAAAATAGTTTAAATTATAAATTAATTTAAAGAACAAATAAAAGAT
TAATGCCTTTAATCCC

hide sequence

RefSeq Acc Id:

NM_001289509 ⟹ NP_001276438

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	137,568,127 - 137,586,344 (+)	NCBI
GRCm38	5	137,569,840 - 137,588,081 (+)	NCBI
Celera	5	134,553,508 - 134,571,633 (+)	NCBI

Sequence:

show sequence

GAGTCTCCTGGGAGCATGGTCCAAGAAACCCAGAGACCTGTTGCTGAGCTGAACTTGGCTGCTG
TGTCTTCCCACTCAGGACTCGGCTTTGACAGGCACGAGGCAGGGACTGGGGTACTGGTGAGCCC
CTACCTCTCAGATCTTTCTGGACCTGGCTGCAGGTCCTGGTGTCTTCGTCGCGGCTTGGATTTC
AAACTGGAGGAGTTCAGGAGGGGGCACAAGCATGGAGCAACGTTGGGGTCTACTTCGGAGAGTG
CAACAGTGGTCCCCAAGACCCTCTCAGACCATCTACAGACGCGTGGAAGGCCCTCAGCTGGAGC
ACCTGGAGGAGGAAGACAGGGAGGAAGGGGCGGAGCTTCCTGCCCAGTTCTGCCCCATGGAACT
CAAAGGCCCTGAGCACTTAGGCTCCTGTCCCGGGAGGTCAATTCCCATACCCTGGGCTGCAGCA
GGTCGAAAGGCTGCCCCCTATCTGGTCCTGATCACCCTGCTAATCTTCACTGGGGCCTTCCTCC
TAGGCTACGTGGCCTTTCGAGGGTCCTGCCAGGCGTGTGGGGACTCCGTGTTGGTGGTCGATGA
AGATGTCAACCCTGAGGACTCCGGCCGGACCACGTTGTACTGGAGCGACCTCCAGGCCATGTTT
CTCCGGTTCCTTGGGGAGGGGCGCATGGAAGACACCATCAGGCTGACCAGCCTCCGGGAACGCG
TGGCTGGCTCAGCCAGAATGGCCACCCTGGTCCAAGATATCCTCGATAAGCTCTCGCGCCAGAA
GCTGGACCACGTGTGGACTGACACGCACTACGTGGGACTTCAGTTCCCAGATCCGGCTCACGCT
AACACCCTGCACTGGGTGGATGCAGACGGGAGCGTCCAGGAGCAGCTACCGCTGGAGGATCCGG
AAGTCTACTGTCCCTACAGCGCCACCGGCAACGCCACGGGCAAGCTGGTGTACGCCCACTACGG
GCGGTCGGAGGACCTACAGGACCTAAAAGCCAAGGGCGTGGAGCTGGCCGGCAGCCTCCTGCTA
GTGCGAGTTGGAATTACTAGCTTCGCCCAGAAGGTAGCCGTTGCCCAGGACTTTGGGGCTCAAG
GAGTGCTGATATACCCTGACCCATCAGACTTCTCCCAGGATCCCCACAAGCCAGGCCTGTCTAG
CCACCAGGCTGTGTACGGACATGTGCACCTGGGAACTGGAGACCCTTACACACCTGGCTTCCCG
TCCTTCAATCAAACCCAGTTCCCTCCAGTAGAATCATCAGGCCTTCCCAGCATCCCCGCCCAGC
CCATCAGTGCTGACATTGCTGATCAATTGCTCAGGAAACTCACAGGCCCCGTGGCTCCCCAGGA
GTGGAAAGGTCACCTCTCAGGCTCTCCTTATCGGCTGGGACCTGGGCCCGACTTACGCCTTGTG
GTCAACAACCACAGAGTCTCTACCCCCATCAGTAACATCTTTGCGTGCATCGAGGGCTTTGCAG
AGCCAGATCACTATGTTGTCATTGGGGCCCAGAGGGATGCATGGGGCCCAGGAGCAGCCAAGTC
TGCAGTGGGGACTGCCATCCTGCTGGAGCTGGTTCGGACCTTCTCTTCCATGGTCAGCAATGGG
TTCAGACCTCGAAGAAGTCTTTTGTTCATCAGCTGGGACGGAGGTGACTTTGGCAGCGTGGGAG
CCACAGAGTGGTTGGAGGGCTACCTCAGCGTGCTACACCTCAAAGCTGTTGTGTACGTGAGCCT
GGACAACTCCGTGTTGGGAGATGGCAAATTCCATGCTAAGACCAGCCCCCTTCTCGTCAGCCTC
ATTGAGAATATCTTGAAGCAGGTGGACTCCCCTAACCATAGTGGACAGACCCTCTATGAACAAG
TGGCACTCACCCACCCCAGCTGGGATGCTGAAGTGATTCAGCCCCTGCCCATGGACAGCAGTGC
ATATTCCTTCACAGCCTTTGCGGGGGTCCCAGCTGTGGAGTTCTCCTTCATGGAGGATGATCGG
GTGTACCCATTCCTGCACACGAAGGAGGACACATATGAGAATCTGCACAAGATGCTGCGAGGTC
GCCTGCCCGCCGTGGTCCAGGCAGTGGCTCAGCTCGCGGGCCAGCTCCTCATCCGACTGAGCCA
CGATCACCTACTGCCGCTAGACTTCGGCCGCTATGGAGACGTGGTTCTCAGGCACATCGGCAAC
CTCAATGAGTTCTCTGGGGACCTCAAGGAGCGCGGGCTGACCCTGCAGTGGGTGTACTCTGCAA
GGGGGGACTACATCCGTGCGGCGGAAAAGCTGCGGAAGGAGATTTACAGCTCGGAGCGGAACGA
TGAGCGTCTGATGCGCATGTACAACGTGCGCATCATGAGGGTGGAGTTCTACTTCCTGTCCCAG
TATGTGTCGCCAGCCGACTCCCCATTCCGCCACATTTTCCTAGGCCAAGGCGACCACACTTTGG
GTGCCCTGGTAGACCACCTGCGGATGCTGCGCGCCGATGGCTCAGGAGCCGCCTCTTCCCGGTT
GACAGCAGGTCTGGGCTTCCAGGAGAGTCGCTTCCGGCGCCAGCTGGCGCTGCTCACCTGGACA
CTGCAGGGGGCAGCCAACGCTCTCAGTGGCGACGTTTGGAACATTGACAATAACTTTTGAAGCC
AAAAGCCCTCCATGGGCCCCACGTGATTCTCCTTTCTCCCTCTTTGAGTGGTGCAGGCAAAGGA
GGTGCCTGAGATTGTAACCTATTCTTAACACCCTTGGTCCTGCAATGCTGGTGCGCCATATTTT
CTCAGTGTGGTTGTCATGCCGTTGCTTACCCAGAAAGCGGTTTTCTTCCCATCACAGGCCCTTC
TGTCTTCAGGAGCAAAGTTCCCCATATCTAGAGACTATCTAGATGCTGGGATCTGATCAGCTCT
CTTAGAGAGTGAGATGGACAGCGTCATTATTTTATGACACATGAGCTACGGTATGTGAGCAGCC
CAAGGGGATTAGATGTCAATAAACCAATTGTAACCCCTGTTGTCCATACGCAATTTAGCTTCCT
CTTCATGCCGTACCCACTCCTCATATCCGCCTTGAGACTAGGGAAGAAGGCACAGAAGGCACCT
GACAGCATGCTTGCAAGATGCTATCCACATGGGAAAAATAACTGTTCTGATGTCTAAGAAAACT
GCCTAAAGATAATGGATAGGAGGTGGGGCAGTGGGGATAACTCATCAGGAATGGGTGATTGCGG
CCAAGCCTGATGACCTGAGTTTAATCCCCAGGACCAACATGGCAAAAGGAGAGAACTAGTTCCC
ACAAGTTTTCCTATATCCTCCAAATGTATGCCCATAAAAGCACAAATAGATAAATGTTTTTGCT
TTTGTTTTTTAAAGTGGCTTTGTGGTTAAGAGCACTGGATGCCATTCTAGAAGACACCGGTTCG
ATTCCCAGCACCCACATGGCCGCTTACAACTGTCTGTAACTCCAGTTGCTGGGGATCAGATGCC
CTCTTCTGGTATGGTGTACGACTGCATGCATGTAGTATACATACAAGCAGGCAAAATACCCATA
CATGTAAAATTTTTAAAAAATAGTTTAAATTATAAATTAATTTAAAGAACAAATAAAAGATTAA
TGCCTTTAATCCC

hide sequence

RefSeq Acc Id:

NM_001289511 ⟹ NP_001276440

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	137,569,006 - 137,586,344 (+)	NCBI
GRCm38	5	137,570,720 - 137,588,081 (+)	NCBI
Celera	5	134,553,508 - 134,571,633 (+)	NCBI

Sequence:

show sequence

AAAAAAAAAAATTGATTGTTTTGCAGTCTGCCCGCAACAGTGGGGTTTGTGGAAAGATTGAGTT
CAGGAGGGGGCACAAGCATGGAGCAACGTTGGGGTCTACTTCGGAGAGTGCAACAGTGGTCCCC
AAGACCCTCTCAGACCATCTACAGACGCGTGGAAGGCCCTCAGCTGGAGCACCTGGAGGAGGAA
GACAGGGAGGAAGGGGCGGAGCTTCCTGCCCAGTTCTGCCCCATGGAACTCAAAGGCCCTGAGC
ACTTAGGCTCCTGTCCCGGGAGGTCAATTCCCATACCCTGGGCTGCAGCAGGTCGAAAGGCTGC
CCCCTATCTGGTCCTGATCACCCTGCTAATCTTCACTGGGGCCTTCCTCCTAGGCTACGTGGCC
TTTCGAGGGTCCTGCCAGGCGTGTGGGGACTCCGTGTTGGTGGTCGATGAAGATGTCAACCCTG
AGGACTCCGGCCGGACCACGTTGTACTGGAGCGACCTCCAGGCCATGTTTCTCCGGTTCCTTGG
GGAGGGGCGCATGGAAGACACCATCAGGCTGACCAGCCTCCGGGAACGCGTGGCTGGCTCAGCC
AGAATGGCCACCCTGGTCCAAGATATCCTCGATAAGCTCTCGCGCCAGAAGCTGGACCACGTGT
GGACTGACACGCACTACGTGGGACTTCAGTTCCCAGATCCGGCTCACGCTAACACCCTGCACTG
GGTGGATGCAGACGGGAGCGTCCAGGAGCAGCTACCGCTGGAGGATCCGGAAGTCTACTGTCCC
TACAGCGCCACCGGCAACGCCACGGGCAAGCTGGTGTACGCCCACTACGGGCGGTCGGAGGACC
TACAGGACCTAAAAGCCAAGGGCGTGGAGCTGGCCGGCAGCCTCCTGCTAGTGCGAGTTGGAAT
TACTAGCTTCGCCCAGAAGGTAGCCGTTGCCCAGGACTTTGGGGCTCAAGGAGTGCTGATATAC
CCTGACCCATCAGACTTCTCCCAGGATCCCCACAAGCCAGGCCTGTCTAGCCACCAGGCTGTGT
ACGGACATGTGCACCTGGGAACTGGAGACCCTTACACACCTGGCTTCCCGTCCTTCAATCAAAC
CCAGTTCCCTCCAGTAGAATCATCAGGCCTTCCCAGCATCCCCGCCCAGCCCATCAGTGCTGAC
ATTGCTGATCAATTGCTCAGGAAACTCACAGGCCCCGTGGCTCCCCAGGAGTGGAAAGGTCACC
TCTCAGGCTCTCCTTATCGGCTGGGACCTGGGCCCGACTTACGCCTTGTGGTCAACAACCACAG
AGTCTCTACCCCCATCAGTAACATCTTTGCGTGCATCGAGGGCTTTGCAGAGCCAGATCACTAT
GTTGTCATTGGGGCCCAGAGGGATGCATGGGGCCCAGGAGCAGCCAAGTCTGCAGTGGGGACTG
CCATCCTGCTGGAGCTGGTTCGGACCTTCTCTTCCATGGTCAGCAATGGGTTCAGACCTCGAAG
AAGTCTTTTGTTCATCAGCTGGGACGGAGGTGACTTTGGCAGCGTGGGAGCCACAGAGTGGTTG
GAGGGCTACCTCAGCGTGCTACACCTCAAAGCTGTTGTGTACGTGAGCCTGGACAACTCCGTGT
TGGGAGATGGCAAATTCCATGCTAAGACCAGCCCCCTTCTCGTCAGCCTCATTGAGAATATCTT
GAAGCAGGTGGACTCCCCTAACCATAGTGGACAGACCCTCTATGAACAAGTGGCACTCACCCAC
CCCAGCTGGGATGCTGAAGTGATTCAGCCCCTGCCCATGGACAGCAGTGCATATTCCTTCACAG
CCTTTGCGGGGGTCCCAGCTGTGGAGTTCTCCTTCATGGAGGATGATCGGGTGTACCCATTCCT
GCACACGAAGGAGGACACATATGAGAATCTGCACAAGATGCTGCGAGGTCGCCTGCCCGCCGTG
GTCCAGGCAGTGGCTCAGCTCGCGGGCCAGCTCCTCATCCGACTGAGCCACGATCACCTACTGC
CGCTAGACTTCGGCCGCTATGGAGACGTGGTTCTCAGGCACATCGGCAACCTCAATGAGTTCTC
TGGGGACCTCAAGGAGCGCGGGCTGACCCTGCAGTGGGTGTACTCTGCAAGGGGGGACTACATC
CGTGCGGCGGAAAAGCTGCGGAAGGAGATTTACAGCTCGGAGCGGAACGATGAGCGTCTGATGC
GCATGTACAACGTGCGCATCATGAGGGTGGAGTTCTACTTCCTGTCCCAGTATGTGTCGCCAGC
CGACTCCCCATTCCGCCACATTTTCCTAGGCCAAGGCGACCACACTTTGGGTGCCCTGGTAGAC
CACCTGCGGATGCTGCGCGCCGATGGCTCAGGAGCCGCCTCTTCCCGGTTGACAGCAGGTCTGG
GCTTCCAGGAGAGTCGCTTCCGGCGCCAGCTGGCGCTGCTCACCTGGACACTGCAGGGGGCAGC
CAACGCTCTCAGTGGCGACGTTTGGAACATTGACAATAACTTTTGAAGCCAAAAGCCCTCCATG
GGCCCCACGTGATTCTCCTTTCTCCCTCTTTGAGTGGTGCAGGCAAAGGAGGTGCCTGAGATTG
TAACCTATTCTTAACACCCTTGGTCCTGCAATGCTGGTGCGCCATATTTTCTCAGTGTGGTTGT
CATGCCGTTGCTTACCCAGAAAGCGGTTTTCTTCCCATCACAGGCCCTTCTGTCTTCAGGAGCA
AAGTTCCCCATATCTAGAGACTATCTAGATGCTGGGATCTGATCAGCTCTCTTAGAGAGTGAGA
TGGACAGCGTCATTATTTTATGACACATGAGCTACGGTATGTGAGCAGCCCAAGGGGATTAGAT
GTCAATAAACCAATTGTAACCCCTGTTGTCCATACGCAATTTAGCTTCCTCTTCATGCCGTACC
CACTCCTCATATCCGCCTTGAGACTAGGGAAGAAGGCACAGAAGGCACCTGACAGCATGCTTGC
AAGATGCTATCCACATGGGAAAAATAACTGTTCTGATGTCTAAGAAAACTGCCTAAAGATAATG
GATAGGAGGTGGGGCAGTGGGGATAACTCATCAGGAATGGGTGATTGCGGCCAAGCCTGATGAC
CTGAGTTTAATCCCCAGGACCAACATGGCAAAAGGAGAGAACTAGTTCCCACAAGTTTTCCTAT
ATCCTCCAAATGTATGCCCATAAAAGCACAAATAGATAAATGTTTTTGCTTTTGTTTTTTAAAG
TGGCTTTGTGGTTAAGAGCACTGGATGCCATTCTAGAAGACACCGGTTCGATTCCCAGCACCCA
CATGGCCGCTTACAACTGTCTGTAACTCCAGTTGCTGGGGATCAGATGCCCTCTTCTGGTATGG
TGTACGACTGCATGCATGTAGTATACATACAAGCAGGCAAAATACCCATACATGTAAAATTTTT
AAAAAATAGTTTAAATTATAAATTAATTTAAAGAACAAATAAAAGATTAATGCCTTTAATCCC

hide sequence

RefSeq Acc Id:

NM_001359206 ⟹ NP_001346135

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	137,568,127 - 137,586,344 (+)	NCBI
GRCm38	5	137,569,840 - 137,588,081 (+)	NCBI

Sequence:

show sequence

GAGTCTCCTGGGAGCATGGTCCAAGAAACCCAGAGACCTGTTGCTGAGCTGAACTTGGCTGCTG
TGTCTTCCCACTCAGGACTCGGCTTTGACAGGCACGAGGCAGGGACTGGGGTACTGGTGAGCCC
CTACCTCTCAGATCTTTCTGGACCTGGGTAGGACCCGCAGTTTCCCAGGGGAAACCTGGACCAG
AAGTAAGGGTGAGGTGGACCCTGAACTTTCCCATTCACAGCTGCAGGTCCTGGTGTCTTCGTCG
CGGCTTGGATTTCAAACTGGAGGAGTTCAGGAGGGGGCACAAGCATGGAGCAACGTTGGGGTCT
ACTTCGGAGAGTGCAACAGTGGTCCCCAAGACCCTCTCAGACCATCTACAGACGCGTGGAAGGC
CCTCAGCTGGAGCACCTGGAGGAGGAAGACAGGGAGGAAGGGGCGGAGCTTCCTGCCCAGTTCT
GCCCCATGGAACTCAAAGGCCCTGAGCACTTAGGCTCCTGTCCCGGGAGGTCAATTCCCATACC
CTGGGCTGCAGCAGGTCGAAAGGCTGCCCCCTATCTGGTCCTGATCACCCTGCTAATCTTCACT
GGGGCCTTCCTCCTAGGCTACGTGGCCTTTCGAGGGTCCTGCCAGGCGTGTGGGGACTCCGTGT
TGGTGGTCGATGAAGATGTCAACCCTGAGGACTCCGGCCGGACCACGTTGTACTGGAGCGACCT
CCAGGCCATGTTTCTCCGGTTCCTTGGGGAGGGGCGCATGGAAGACACCATCAGGCTGACCAGC
CTCCGGGAACGCGTGGCTGGCTCAGCCAGAATGGCCACCCTGGTCCAAGATATCCTCGATAAGC
TCTCGCGCCAGAAGCTGGACCACGTGTGGACTGACACGCACTACGTGGGACTTCAGTTCCCAGA
TCCGGCTCACGCTAACACCCTGCACTGGGTGGATGCAGACGGGAGCGTCCAGGAGCAGCTACCG
CTGGAGGATCCGGAAGTCTACTGTCCCTACAGCGCCACCGGCAACGCCACGGGCAAGCTGGTGT
ACGCCCACTACGGGCGGTCGGAGGACCTACAGGACCTAAAAGCCAAGGGCGTGGAGCTGGCCGG
CAGCCTCCTGCTAGTGCGAGTTGGAATTACTAGCTTCGCCCAGAAGGTAGCCGTTGCCCAGGAC
TTTGGGGCTCAAGGAGTGCTGATATACCCTGACCCATCAGACTTCTCCCAGGATCCCCACAAGC
CAGGCCTGTCTAGCCACCAGGCTGTGTACGGACATGTGCACCTGGGAACTGGAGACCCTTACAC
ACCTGGCTTCCCGTCCTTCAATCAAACCCAGTTCCCTCCAGTAGAATCATCAGGCCTTCCCAGC
ATCCCCGCCCAGCCCATCAGTGCTGACATTGCTGATCAATTGCTCAGGAAACTCACAGGCCCCG
TGGCTCCCCAGGAGTGGAAAGGTCACCTCTCAGGCTCTCCTTATCGGCTGGGACCTGGGCCCGA
CTTACGCCTTGTGGTCAACAACCACAGAGTCTCTACCCCCATCAGTAACATCTTTGCGTGCATC
GAGGGCTTTGCAGAGCCAGATCACTATGTTGTCATTGGGGCCCAGAGGGATGCATGGGGCCCAG
GAGCAGCCAAGTCTGCAGTGGGGACTGCCATCCTGCTGGAGCTGGTTCGGACCTTCTCTTCCAT
GGTCAGCAATGGGTTCAGACCTCGAAGAAGTCTTTTGTTCATCAGCTGGGACGGAGGTGACTTT
GGCAGCGTGGGAGCCACAGAGTGGTTGGAGGGCTACCTCAGCGTGCTACACCTCAAAGCTGTTG
TGTACGTGAGCCTGGACAACTCCGTGTTGGGAGATGGCAAATTCCATGCTAAGACCAGCCCCCT
TCTCGTCAGCCTCATTGAGAATATCTTGAAGCAGGTGGACTCCCCTAACCATAGTGGACAGACC
CTCTATGAACAAGTGGCACTCACCCACCCCAGCTGGGATGCTGAAGTGATTCAGCCCCTGCCCA
TGGACAGCAGTGCATATTCCTTCACAGCCTTTGCGGGGGTCCCAGCTGTGGAGTTCTCCTTCAT
GGAGGATGATCGGGTGTACCCATTCCTGCACACGAAGGAGGACACATATGAGAATCTGCACAAG
ATGCTGCGAGGTCGCCTGCCCGCCGTGGTCCAGGCAGTGGCTCAGCTCGCGGGCCAGCTCCTCA
TCCGACTGAGCCACGATCACCTACTGCCGCTAGACTTCGGCCGCTATGGAGACGTGGTTCTCAG
GCACATCGGCAACCTCAATGAGTTCTCTGGGGACCTCAAGGAGCGCGGGCTGACCCTGCAGTGG
GTGTACTCTGCAAGGGGGGACTACATCCGTGCGGCGGAAAAGCTGCGGAAGGAGATTTACAGCT
CGGAGCGGAACGATGAGCGTCTGATGCGCATGTACAACGTGCGCATCATGAGGGTGGAGTTCTA
CTTCCTGTCCCAGTATGTGTCGCCAGCCGACTCCCCATTCCGCCACATTTTCCTAGGCCAAGGC
GACCACACTTTGGGTGCCCTGGTAGACCACCTGCGGATGCTGCGCGCCGATGGCTCAGGAGCCG
CCTCTTCCCGGTTGACAGCAGGTCTGGGCTTCCAGGAGAGTCGCTTCCGGCGCCAGCTGGCGCT
GCTCACCTGGACACTGCAGGGGGCAGCCAACGCTCTCAGTGGCGACGTTTGGAACATTGACAAT
AACTTTTGAAGCCAAAAGCCCTCCATGGGCCCCACGTGATTCTCCTTTCTCCCTCTTTGAGTGG
TGCAGGCAAAGGAGGTGCCTGAGATTGTAACCTATTCTTAACACCCTTGGTCCTGCAATGCTGG
TGCGCCATATTTTCTCAGTGTGGTTGTCATGCCGTTGCTTACCCAGAAAGCGGTTTTCTTCCCA
TCACAGGCCCTTCTGTCTTCAGGAGCAAAGTTCCCCATATCTAGAGACTATCTAGATGCTGGGA
TCTGATCAGCTCTCTTAGAGAGTGAGATGGACAGCGTCATTATTTTATGACACATGAGCTACGG
TATGTGAGCAGCCCAAGGGGATTAGATGTCAATAAACCAATTGTAACCCCTGTTGTCCATACGC
AATTTAGCTTCCTCTTCATGCCGTACCCACTCCTCATATCCGCCTTGAGACTAGGGAAGAAGGC
ACAGAAGGCACCTGACAGCATGCTTGCAAGATGCTATCCACATGGGAAAAATAACTGTTCTGAT
GTCTAAGAAAACTGCCTAAAGATAATGGATAGGAGGTGGGGCAGTGGGGATAACTCATCAGGAA
TGGGTGATTGCGGCCAAGCCTGATGACCTGAGTTTAATCCCCAGGACCAACATGGCAAAAGGAG
AGAACTAGTTCCCACAAGTTTTCCTATATCCTCCAAATGTATGCCCATAAAAGCACAAATAGAT
AAATGTTTTTGCTTTTGTTTTTTAAAGTGGCTTTGTGGTTAAGAGCACTGGATGCCATTCTAGA
AGACACCGGTTCGATTCCCAGCACCCACATGGCCGCTTACAACTGTCTGTAACTCCAGTTGCTG
GGGATCAGATGCCCTCTTCTGGTATGGTGTACGACTGCATGCATGTAGTATACATACAAGCAGG
CAAAATACCCATACATGTAAAATTTTTAAAAAATAGTTTAAATTATAAATTAATTTAAAGAACA
AATAAAAGATTAATGCCTTTAATCCC

hide sequence

RefSeq Acc Id:

NM_001425505 ⟹ NP_001412434

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	137,568,127 - 137,586,344 (+)	NCBI

RefSeq Acc Id:

NM_001425506 ⟹ NP_001412435

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	137,568,127 - 137,586,344 (+)	NCBI

RefSeq Acc Id:

NM_001425507 ⟹ NP_001412436

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	137,568,127 - 137,586,344 (+)	NCBI

RefSeq Acc Id:

NM_015799 ⟹ NP_056614

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	137,568,127 - 137,586,344 (+)	NCBI
GRCm38	5	137,569,840 - 137,588,081 (+)	NCBI
MGSCv37	5	138,011,079 - 138,028,709 (+)	RGD
Celera	5	134,553,508 - 134,571,633 (+)	NCBI
cM Map	5		ENTREZGENE

Sequence:

show sequence

GAGTCTCCTGGGAGCATGGTCCAAGAAACCCAGAGACCTGTTGCTGAGCTGAACTTGGCTGCTG
TGTCTTCCCACTCAGGACTCGGCTTTGACAGCTGCAGGTCCTGGTGTCTTCGTCGCGGCTTGGA
TTTCAAACTGGAGGAGTTCAGGAGGGGGCACAAGCATGGAGCAACGTTGGGGTCTACTTCGGAG
AGTGCAACAGTGGTCCCCAAGACCCTCTCAGACCATCTACAGACGCGTGGAAGGCCCTCAGCTG
GAGCACCTGGAGGAGGAAGACAGGGAGGAAGGGGCGGAGCTTCCTGCCCAGTTCTGCCCCATGG
AACTCAAAGGCCCTGAGCACTTAGGCTCCTGTCCCGGGAGGTCAATTCCCATACCCTGGGCTGC
AGCAGGTCGAAAGGCTGCCCCCTATCTGGTCCTGATCACCCTGCTAATCTTCACTGGGGCCTTC
CTCCTAGGCTACGTGGCCTTTCGAGGGTCCTGCCAGGCGTGTGGGGACTCCGTGTTGGTGGTCG
ATGAAGATGTCAACCCTGAGGACTCCGGCCGGACCACGTTGTACTGGAGCGACCTCCAGGCCAT
GTTTCTCCGGTTCCTTGGGGAGGGGCGCATGGAAGACACCATCAGGCTGACCAGCCTCCGGGAA
CGCGTGGCTGGCTCAGCCAGAATGGCCACCCTGGTCCAAGATATCCTCGATAAGCTCTCGCGCC
AGAAGCTGGACCACGTGTGGACTGACACGCACTACGTGGGACTTCAGTTCCCAGATCCGGCTCA
CGCTAACACCCTGCACTGGGTGGATGCAGACGGGAGCGTCCAGGAGCAGCTACCGCTGGAGGAT
CCGGAAGTCTACTGTCCCTACAGCGCCACCGGCAACGCCACGGGCAAGCTGGTGTACGCCCACT
ACGGGCGGTCGGAGGACCTACAGGACCTAAAAGCCAAGGGCGTGGAGCTGGCCGGCAGCCTCCT
GCTAGTGCGAGTTGGAATTACTAGCTTCGCCCAGAAGGTAGCCGTTGCCCAGGACTTTGGGGCT
CAAGGAGTGCTGATATACCCTGACCCATCAGACTTCTCCCAGGATCCCCACAAGCCAGGCCTGT
CTAGCCACCAGGCTGTGTACGGACATGTGCACCTGGGAACTGGAGACCCTTACACACCTGGCTT
CCCGTCCTTCAATCAAACCCAGTTCCCTCCAGTAGAATCATCAGGCCTTCCCAGCATCCCCGCC
CAGCCCATCAGTGCTGACATTGCTGATCAATTGCTCAGGAAACTCACAGGCCCCGTGGCTCCCC
AGGAGTGGAAAGGTCACCTCTCAGGCTCTCCTTATCGGCTGGGACCTGGGCCCGACTTACGCCT
TGTGGTCAACAACCACAGAGTCTCTACCCCCATCAGTAACATCTTTGCGTGCATCGAGGGCTTT
GCAGAGCCAGATCACTATGTTGTCATTGGGGCCCAGAGGGATGCATGGGGCCCAGGAGCAGCCA
AGTCTGCAGTGGGGACTGCCATCCTGCTGGAGCTGGTTCGGACCTTCTCTTCCATGGTCAGCAA
TGGGTTCAGACCTCGAAGAAGTCTTTTGTTCATCAGCTGGGACGGAGGTGACTTTGGCAGCGTG
GGAGCCACAGAGTGGTTGGAGGGCTACCTCAGCGTGCTACACCTCAAAGCTGTTGTGTACGTGA
GCCTGGACAACTCCGTGTTGGGAGATGGCAAATTCCATGCTAAGACCAGCCCCCTTCTCGTCAG
CCTCATTGAGAATATCTTGAAGCAGGTGGACTCCCCTAACCATAGTGGACAGACCCTCTATGAA
CAAGTGGCACTCACCCACCCCAGCTGGGATGCTGAAGTGATTCAGCCCCTGCCCATGGACAGCA
GTGCATATTCCTTCACAGCCTTTGCGGGGGTCCCAGCTGTGGAGTTCTCCTTCATGGAGGATGA
TCGGGTGTACCCATTCCTGCACACGAAGGAGGACACATATGAGAATCTGCACAAGATGCTGCGA
GGTCGCCTGCCCGCCGTGGTCCAGGCAGTGGCTCAGCTCGCGGGCCAGCTCCTCATCCGACTGA
GCCACGATCACCTACTGCCGCTAGACTTCGGCCGCTATGGAGACGTGGTTCTCAGGCACATCGG
CAACCTCAATGAGTTCTCTGGGGACCTCAAGGAGCGCGGGCTGACCCTGCAGTGGGTGTACTCT
GCAAGGGGGGACTACATCCGTGCGGCGGAAAAGCTGCGGAAGGAGATTTACAGCTCGGAGCGGA
ACGATGAGCGTCTGATGCGCATGTACAACGTGCGCATCATGAGGGTGGAGTTCTACTTCCTGTC
CCAGTATGTGTCGCCAGCCGACTCCCCATTCCGCCACATTTTCCTAGGCCAAGGCGACCACACT
TTGGGTGCCCTGGTAGACCACCTGCGGATGCTGCGCGCCGATGGCTCAGGAGCCGCCTCTTCCC
GGTTGACAGCAGGTCTGGGCTTCCAGGAGAGTCGCTTCCGGCGCCAGCTGGCGCTGCTCACCTG
GACACTGCAGGGGGCAGCCAACGCTCTCAGTGGCGACGTTTGGAACATTGACAATAACTTTTGA
AGCCAAAAGCCCTCCATGGGCCCCACGTGATTCTCCTTTCTCCCTCTTTGAGTGGTGCAGGCAA
AGGAGGTGCCTGAGATTGTAACCTATTCTTAACACCCTTGGTCCTGCAATGCTGGTGCGCCATA
TTTTCTCAGTGTGGTTGTCATGCCGTTGCTTACCCAGAAAGCGGTTTTCTTCCCATCACAGGCC
CTTCTGTCTTCAGGAGCAAAGTTCCCCATATCTAGAGACTATCTAGATGCTGGGATCTGATCAG
CTCTCTTAGAGAGTGAGATGGACAGCGTCATTATTTTATGACACATGAGCTACGGTATGTGAGC
AGCCCAAGGGGATTAGATGTCAATAAACCAATTGTAACCCCTGTTGTCCATACGCAATTTAGCT
TCCTCTTCATGCCGTACCCACTCCTCATATCCGCCTTGAGACTAGGGAAGAAGGCACAGAAGGC
ACCTGACAGCATGCTTGCAAGATGCTATCCACATGGGAAAAATAACTGTTCTGATGTCTAAGAA
AACTGCCTAAAGATAATGGATAGGAGGTGGGGCAGTGGGGATAACTCATCAGGAATGGGTGATT
GCGGCCAAGCCTGATGACCTGAGTTTAATCCCCAGGACCAACATGGCAAAAGGAGAGAACTAGT
TCCCACAAGTTTTCCTATATCCTCCAAATGTATGCCCATAAAAGCACAAATAGATAAATGTTTT
TGCTTTTGTTTTTTAAAGTGGCTTTGTGGTTAAGAGCACTGGATGCCATTCTAGAAGACACCGG
TTCGATTCCCAGCACCCACATGGCCGCTTACAACTGTCTGTAACTCCAGTTGCTGGGGATCAGA
TGCCCTCTTCTGGTATGGTGTACGACTGCATGCATGTAGTATACATACAAGCAGGCAAAATACC
CATACATGTAAAATTTTTAAAAAATAGTTTAAATTATAAATTAATTTAAAGAACAAATAAAAGA
TTAATGCCTTTAATCCC

hide sequence

Protein Sequences


Protein RefSeqs	NP_001276436	(Get FASTA)	NCBI Sequence Viewer
	NP_001276438	(Get FASTA)	NCBI Sequence Viewer
	NP_001276440	(Get FASTA)	NCBI Sequence Viewer
	NP_001346135	(Get FASTA)	NCBI Sequence Viewer
	NP_001412434	(Get FASTA)	NCBI Sequence Viewer
	NP_001412435	(Get FASTA)	NCBI Sequence Viewer
	NP_001412436	(Get FASTA)	NCBI Sequence Viewer
	NP_056614	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAF37272	(Get FASTA)	NCBI Sequence Viewer
	AAH13654	(Get FASTA)	NCBI Sequence Viewer
	AAK28830	(Get FASTA)	NCBI Sequence Viewer
	AAL05976	(Get FASTA)	NCBI Sequence Viewer
	AAL05977	(Get FASTA)	NCBI Sequence Viewer
	BAB23614	(Get FASTA)	NCBI Sequence Viewer
	BAB23705	(Get FASTA)	NCBI Sequence Viewer
	EDL19255	(Get FASTA)	NCBI Sequence Viewer
	EDL19256	(Get FASTA)	NCBI Sequence Viewer
	EDL19257	(Get FASTA)	NCBI Sequence Viewer
	EDL19258	(Get FASTA)	NCBI Sequence Viewer
	EDL19259	(Get FASTA)	NCBI Sequence Viewer
	EDL19260	(Get FASTA)	NCBI Sequence Viewer
	EDL19261	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000031729
	ENSMUSP00000031729.9
	ENSMUSP00000142478
	ENSMUSP00000142478.2
	ENSMUSP00000142502
	ENSMUSP00000142502.2
	ENSMUSP00000142720
	ENSMUSP00000142720.2
	ENSMUSP00000142731.2
	ENSMUSP00000142814
	ENSMUSP00000142814.2
GenBank Protein	Q9JKX3	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_056614 ⟸ NM_015799

- UniProtKB:

Q99MQ9 (UniProtKB/Swiss-Prot), Q920I6 (UniProtKB/Swiss-Prot), Q9CPT2 (UniProtKB/Swiss-Prot), Q9JKX3 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MEQRWGLLRRVQQWSPRPSQTIYRRVEGPQLEHLEEEDREEGAELPAQFCPMELKGPEHLGSCP
GRSIPIPWAAAGRKAAPYLVLITLLIFTGAFLLGYVAFRGSCQACGDSVLVVDEDVNPEDSGRT
TLYWSDLQAMFLRFLGEGRMEDTIRLTSLRERVAGSARMATLVQDILDKLSRQKLDHVWTDTHY
VGLQFPDPAHANTLHWVDADGSVQEQLPLEDPEVYCPYSATGNATGKLVYAHYGRSEDLQDLKA
KGVELAGSLLLVRVGITSFAQKVAVAQDFGAQGVLIYPDPSDFSQDPHKPGLSSHQAVYGHVHL
GTGDPYTPGFPSFNQTQFPPVESSGLPSIPAQPISADIADQLLRKLTGPVAPQEWKGHLSGSPY
RLGPGPDLRLVVNNHRVSTPISNIFACIEGFAEPDHYVVIGAQRDAWGPGAAKSAVGTAILLEL
VRTFSSMVSNGFRPRRSLLFISWDGGDFGSVGATEWLEGYLSVLHLKAVVYVSLDNSVLGDGKF
HAKTSPLLVSLIENILKQVDSPNHSGQTLYEQVALTHPSWDAEVIQPLPMDSSAYSFTAFAGVP
AVEFSFMEDDRVYPFLHTKEDTYENLHKMLRGRLPAVVQAVAQLAGQLLIRLSHDHLLPLDFGR
YGDVVLRHIGNLNEFSGDLKERGLTLQWVYSARGDYIRAAEKLRKEIYSSERNDERLMRMYNVR
IMRVEFYFLSQYVSPADSPFRHIFLGQGDHTLGALVDHLRMLRADGSGAASSRLTAGLGFQESR
FRRQLALLTWTLQGAANALSGDVWNIDNNF

hide sequence

RefSeq Acc Id:

NP_001276438 ⟸ NM_001289509

- UniProtKB:

Q99MQ9 (UniProtKB/Swiss-Prot), Q920I6 (UniProtKB/Swiss-Prot), Q9CPT2 (UniProtKB/Swiss-Prot), Q9JKX3 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MEQRWGLLRRVQQWSPRPSQTIYRRVEGPQLEHLEEEDREEGAELPAQFCPMELKGPEHLGSCP
GRSIPIPWAAAGRKAAPYLVLITLLIFTGAFLLGYVAFRGSCQACGDSVLVVDEDVNPEDSGRT
TLYWSDLQAMFLRFLGEGRMEDTIRLTSLRERVAGSARMATLVQDILDKLSRQKLDHVWTDTHY
VGLQFPDPAHANTLHWVDADGSVQEQLPLEDPEVYCPYSATGNATGKLVYAHYGRSEDLQDLKA
KGVELAGSLLLVRVGITSFAQKVAVAQDFGAQGVLIYPDPSDFSQDPHKPGLSSHQAVYGHVHL
GTGDPYTPGFPSFNQTQFPPVESSGLPSIPAQPISADIADQLLRKLTGPVAPQEWKGHLSGSPY
RLGPGPDLRLVVNNHRVSTPISNIFACIEGFAEPDHYVVIGAQRDAWGPGAAKSAVGTAILLEL
VRTFSSMVSNGFRPRRSLLFISWDGGDFGSVGATEWLEGYLSVLHLKAVVYVSLDNSVLGDGKF
HAKTSPLLVSLIENILKQVDSPNHSGQTLYEQVALTHPSWDAEVIQPLPMDSSAYSFTAFAGVP
AVEFSFMEDDRVYPFLHTKEDTYENLHKMLRGRLPAVVQAVAQLAGQLLIRLSHDHLLPLDFGR
YGDVVLRHIGNLNEFSGDLKERGLTLQWVYSARGDYIRAAEKLRKEIYSSERNDERLMRMYNVR
IMRVEFYFLSQYVSPADSPFRHIFLGQGDHTLGALVDHLRMLRADGSGAASSRLTAGLGFQESR
FRRQLALLTWTLQGAANALSGDVWNIDNNF

hide sequence

RefSeq Acc Id:

NP_001276440 ⟸ NM_001289511

- UniProtKB:

Q99MQ9 (UniProtKB/Swiss-Prot), Q920I6 (UniProtKB/Swiss-Prot), Q9CPT2 (UniProtKB/Swiss-Prot), Q9JKX3 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MEQRWGLLRRVQQWSPRPSQTIYRRVEGPQLEHLEEEDREEGAELPAQFCPMELKGPEHLGSCP
GRSIPIPWAAAGRKAAPYLVLITLLIFTGAFLLGYVAFRGSCQACGDSVLVVDEDVNPEDSGRT
TLYWSDLQAMFLRFLGEGRMEDTIRLTSLRERVAGSARMATLVQDILDKLSRQKLDHVWTDTHY
VGLQFPDPAHANTLHWVDADGSVQEQLPLEDPEVYCPYSATGNATGKLVYAHYGRSEDLQDLKA
KGVELAGSLLLVRVGITSFAQKVAVAQDFGAQGVLIYPDPSDFSQDPHKPGLSSHQAVYGHVHL
GTGDPYTPGFPSFNQTQFPPVESSGLPSIPAQPISADIADQLLRKLTGPVAPQEWKGHLSGSPY
RLGPGPDLRLVVNNHRVSTPISNIFACIEGFAEPDHYVVIGAQRDAWGPGAAKSAVGTAILLEL
VRTFSSMVSNGFRPRRSLLFISWDGGDFGSVGATEWLEGYLSVLHLKAVVYVSLDNSVLGDGKF
HAKTSPLLVSLIENILKQVDSPNHSGQTLYEQVALTHPSWDAEVIQPLPMDSSAYSFTAFAGVP
AVEFSFMEDDRVYPFLHTKEDTYENLHKMLRGRLPAVVQAVAQLAGQLLIRLSHDHLLPLDFGR
YGDVVLRHIGNLNEFSGDLKERGLTLQWVYSARGDYIRAAEKLRKEIYSSERNDERLMRMYNVR
IMRVEFYFLSQYVSPADSPFRHIFLGQGDHTLGALVDHLRMLRADGSGAASSRLTAGLGFQESR
FRRQLALLTWTLQGAANALSGDVWNIDNNF

hide sequence

RefSeq Acc Id:

NP_001276436 ⟸ NM_001289507

- UniProtKB:

Q9JKX3 (UniProtKB/Swiss-Prot), Q99MQ9 (UniProtKB/Swiss-Prot), Q920I6 (UniProtKB/Swiss-Prot), Q9CPT2 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MRNGLGSGCLSGLIRGPLGLPQTVYRGFVCVCVDYLQSSGGGTSMEQRWGLLRRVQQWSPRPSQ
TIYRRVEGPQLEHLEEEDREEGAELPAQFCPMELKGPEHLGSCPGRSIPIPWAAAGRKAAPYLV
LITLLIFTGAFLLGYVAFRGSCQACGDSVLVVDEDVNPEDSGRTTLYWSDLQAMFLRFLGEGRM
EDTIRLTSLRERVAGSARMATLVQDILDKLSRQKLDHVWTDTHYVGLQFPDPAHANTLHWVDAD
GSVQEQLPLEDPEVYCPYSATGNATGKLVYAHYGRSEDLQDLKAKGVELAGSLLLVRVGITSFA
QKVAVAQDFGAQGVLIYPDPSDFSQDPHKPGLSSHQAVYGHVHLGTGDPYTPGFPSFNQTQFPP
VESSGLPSIPAQPISADIADQLLRKLTGPVAPQEWKGHLSGSPYRLGPGPDLRLVVNNHRVSTP
ISNIFACIEGFAEPDHYVVIGAQRDAWGPGAAKSAVGTAILLELVRTFSSMVSNGFRPRRSLLF
ISWDGGDFGSVGATEWLEGYLSVLHLKAVVYVSLDNSVLGDGKFHAKTSPLLVSLIENILKQVD
SPNHSGQTLYEQVALTHPSWDAEVIQPLPMDSSAYSFTAFAGVPAVEFSFMEDDRVYPFLHTKE
DTYENLHKMLRGRLPAVVQAVAQLAGQLLIRLSHDHLLPLDFGRYGDVVLRHIGNLNEFSGDLK
ERGLTLQWVYSARGDYIRAAEKLRKEIYSSERNDERLMRMYNVRIMRVEFYFLSQYVSPADSPF
RHIFLGQGDHTLGALVDHLRMLRADGSGAASSRLTAGLGFQESRFRRQLALLTWTLQGAANALS
GDVWNIDNNF

hide sequence

RefSeq Acc Id:	NP_001346135 ⟸ NM_001359206
- UniProtKB:	Q9JKX3 (UniProtKB/Swiss-Prot), Q99MQ9 (UniProtKB/Swiss-Prot), Q920I6 (UniProtKB/Swiss-Prot), Q9CPT2 (UniProtKB/Swiss-Prot)

Ensembl Acc Id:

ENSMUSP00000142502 ⟸ ENSMUST00000198783

Ensembl Acc Id:

ENSMUSP00000142720 ⟸ ENSMUST00000198866

Ensembl Acc Id:

ENSMUSP00000031729 ⟸ ENSMUST00000031729

Ensembl Acc Id:

ENSMUSP00000142478 ⟸ ENSMUST00000199054

Ensembl Acc Id:

ENSMUSP00000142731 ⟸ ENSMUST00000196375

Ensembl Acc Id:

ENSMUSP00000142814 ⟸ ENSMUST00000196471

RefSeq Acc Id:	NP_001412434 ⟸ NM_001425505
- UniProtKB:	Q9JKX3 (UniProtKB/Swiss-Prot), Q9CPT2 (UniProtKB/Swiss-Prot), Q99MQ9 (UniProtKB/Swiss-Prot), Q920I6 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	NP_001412436 ⟸ NM_001425507
- UniProtKB:	Q9JKX3 (UniProtKB/Swiss-Prot), Q9CPT2 (UniProtKB/Swiss-Prot), Q99MQ9 (UniProtKB/Swiss-Prot), Q920I6 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	NP_001412435 ⟸ NM_001425506
- UniProtKB:	Q9JKX3 (UniProtKB/Swiss-Prot), Q9CPT2 (UniProtKB/Swiss-Prot), Q99MQ9 (UniProtKB/Swiss-Prot), Q920I6 (UniProtKB/Swiss-Prot)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9JKX3-F1-model_v2	AlphaFold	Q9JKX3	1-798	view protein structure

Promoters

RGD ID:

6888440

Promoter ID:

EPDNEW_M7671

Type:

initiation region

Name:

Tfr2_1

Description:

Mus musculus transferrin receptor 2 , transcript variant 1, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	5	137,569,865 - 137,569,925	EPDNEW

RGD ID:

6838569

Promoter ID:

MM_KWN:44479

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Liver

Transcripts:

ENSMUST00000111009, NM_015799, UC009ACV.1, UC009ACX.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	5	138,010,881 - 138,011,381 (+)	MPROMDB

RGD ID:

6838571

Promoter ID:

MM_KWN:44480

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Liver

Transcripts:

UC009ACY.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	5	138,012,281 - 138,012,781 (+)	MPROMDB

RGD ID:

6847972

Promoter ID:

MM_ACW:39879

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Liver, Lung

Transcripts:

TRFR2.FSEP07

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	5	138,015,524 - 138,016,024 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1354956	AgrOrtholog
Ensembl Genes	ENSMUSG00000029716	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000031729	ENTREZGENE
	ENSMUST00000031729.13	UniProtKB/Swiss-Prot
	ENSMUST00000196375.2	UniProtKB/TrEMBL
	ENSMUST00000196471	ENTREZGENE
	ENSMUST00000196471.5	UniProtKB/Swiss-Prot
	ENSMUST00000198783	ENTREZGENE
	ENSMUST00000198783.5	UniProtKB/Swiss-Prot
	ENSMUST00000198866	ENTREZGENE
	ENSMUST00000198866.5	UniProtKB/Swiss-Prot
	ENSMUST00000199054	ENTREZGENE
	ENSMUST00000199054.5	UniProtKB/Swiss-Prot
Gene3D-CATH	1.20.930.40	UniProtKB/Swiss-Prot
	3.50.30.30	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Zn peptidases	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	PA_dom_sf	UniProtKB/Swiss-Prot
	PA_domain	UniProtKB/Swiss-Prot
	Peptidase_M28	UniProtKB/Swiss-Prot
	Peptidase_M28B	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TFR-like_dimer_dom_sf	UniProtKB/Swiss-Prot
	TfR1/2_PA	UniProtKB/Swiss-Prot
KEGG Report	mmu:50765	UniProtKB/Swiss-Prot
MGD	MGI:1354956	ENTREZGENE
NCBI Gene	50765	ENTREZGENE
PANTHER	PTHR10404	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TRANSFERRIN RECEPTOR PROTEIN 2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Peptidase_M28	UniProtKB/Swiss-Prot
	PF02225	UniProtKB/Swiss-Prot
PhenoGen	Tfr2	PhenoGen
Superfamily-SCOP	PA domain	UniProtKB/Swiss-Prot
	SSF47672	UniProtKB/Swiss-Prot
	Zn-dependent exopeptidases	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A0G2JED7_MOUSE	UniProtKB/TrEMBL
	Q920I6	ENTREZGENE
	Q99MQ9	ENTREZGENE
	Q9CPT2	ENTREZGENE
	Q9JKX3	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	Q920I6	UniProtKB/Swiss-Prot
	Q99MQ9	UniProtKB/Swiss-Prot
	Q9CPT2	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2012-03-20	Tfr2	transferrin receptor 2	Trfr2	transferrin receptor 2	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

Mammalian Phenotype

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

Mammalian Phenotype