Mtap (methylthioadenosine phosphorylase) - Rat Genome Database

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Gene: Mtap (methylthioadenosine phosphorylase) Mus musculus
Analyze
Symbol: Mtap
Name: methylthioadenosine phosphorylase
RGD ID: 1320831
MGI Page MGI
Description: Predicted to enable S-methyl-5-thioadenosine phosphorylase activity. Acts upstream of or within methylation. Predicted to be located in nucleoplasm. Predicted to be active in cytosol. Is expressed in several structures, including alimentary system; brain; genitourinary system; integumental system; and sensory organ. Human ortholog(s) of this gene implicated in biliary tract benign neoplasm and diaphyseal medullary stenosis with malignant fibrous histiocytoma. Orthologous to human MTAP (methylthioadenosine phosphorylase).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1300019I21Rik; 5'-methylthioadenosine phosphorylase; MSAP; MTA phosphorylase; MTAPase; S-methyl-5'-thioadenosine phosphorylase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm18645   Gm4914  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39489,055,607 - 89,099,327 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl489,055,359 - 89,099,318 (+)EnsemblGRCm39 Ensembl
GRCm38489,137,370 - 89,181,090 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl489,137,122 - 89,181,081 (+)EnsemblGRCm38mm10GRCm38
MGSCv37488,783,274 - 88,826,994 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36488,608,657 - 88,652,314 (+)NCBIMGSCv36mm8
Celera487,620,095 - 87,663,899 (+)NCBICelera
Cytogenetic Map4C4NCBI
cM Map442.15NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
1,2-dimethylhydrazine  (EXP)
1-chloro-2,4-dinitrobenzene  (ISO)
17alpha-ethynylestradiol  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-methylcholine  (ISO)
4-hydroxyphenyl retinamide  (EXP)
5-fluorouracil  (ISO)
acrolein  (ISO)
acrylamide  (ISO)
alpha-pinene  (ISO)
aristolochic acid A  (ISO)
Aroclor 1254  (EXP)
arsenous acid  (ISO)
benzo[a]pyrene  (EXP,ISO)
beta-lapachone  (ISO)
bisphenol A  (ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
CGP 52608  (ISO)
chlorpyrifos  (EXP)
choline  (EXP)
clofibrate  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
cyclosporin A  (EXP,ISO)
diarsenic trioxide  (ISO)
Dibutyl phosphate  (ISO)
dichloroacetic acid  (EXP)
dorsomorphin  (ISO)
doxorubicin  (ISO)
enzyme inhibitor  (ISO)
epoxiconazole  (EXP)
ethyl methanesulfonate  (ISO)
flutamide  (ISO)
folic acid  (EXP)
formaldehyde  (ISO)
gentamycin  (ISO)
inulin  (EXP)
ivermectin  (ISO)
L-methionine  (EXP)
manganese(II) chloride  (ISO)
methidathion  (EXP)
methotrexate  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
oxaliplatin  (ISO)
ozone  (ISO)
paracetamol  (ISO)
perfluorohexanesulfonic acid  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
pirinixic acid  (EXP)
SB 431542  (ISO)
silicon dioxide  (EXP)
sodium arsenite  (ISO)
tamoxifen  (EXP)
tanespimycin  (ISO)
temozolomide  (ISO)
tetrachloromethane  (EXP)
thioacetamide  (ISO)
titanium dioxide  (EXP)
tolcapone  (ISO)
topotecan  (ISO)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA)
cytosol  (IBA,IEA,ISO)
nucleoplasm  (IEA,ISO)
nucleus  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Aminooxy analogues of spermidine as inhibitors of spermine synthase and substrates of hepatic polyamine acetylating activity. Eloranta TO, etal., J Biochem. 1990 Oct;108(4):593-8.
2. Homozygous deletion of the MTAP gene in invasive adenocarcinoma of the pancreas and in periampullary cancer: a potential new target for therapy. Hustinx SR, etal., Cancer Biol Ther. 2005 Jan;4(1):83-6. Epub 2005 Jan 15.
3. Homozygous deletions of methylthioadenosine phosphorylase in human biliary tract cancers. Karikari CA, etal., Mol Cancer Ther. 2005 Dec;4(12):1860-6.
4. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
5. S-adenosylmethionine in liver health, injury, and cancer. Lu SC and Mato JM, Physiol Rev. 2012 Oct;92(4):1515-42. doi: 10.1152/physrev.00047.2011.
6. MGDs mouse GO annotations MGD data from the GO Consortium
7. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
8. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
9. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
10. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
11. Mouse MP Annotation Import Pipeline RGD automated import pipeline
12. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
13. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
14. Loss of methylthioadenosine phosphorylase and elevated ornithine decarboxylase is common in pancreatic cancer. Subhi AL, etal., Clin Cancer Res. 2004 Nov 1;10(21):7290-6.
Additional References at PubMed
PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:12618140   PMID:12824877   PMID:14681479   PMID:15489334   PMID:15782199   PMID:16141072  
PMID:16141073   PMID:17534888   PMID:17967808   PMID:18237276   PMID:18287559   PMID:18307411   PMID:18346207   PMID:19423573   PMID:19491104   PMID:19567676   PMID:21267068   PMID:21327095  
PMID:21491542   PMID:21677750   PMID:21873635   PMID:22952318   PMID:23840755   PMID:24324622   PMID:26819315   PMID:28378742   PMID:30333137   PMID:30550785   PMID:32325033   PMID:34321999  
PMID:36114006   PMID:38355793  


Genomics

Comparative Map Data
Mtap
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39489,055,607 - 89,099,327 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl489,055,359 - 89,099,318 (+)EnsemblGRCm39 Ensembl
GRCm38489,137,370 - 89,181,090 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl489,137,122 - 89,181,081 (+)EnsemblGRCm38mm10GRCm38
MGSCv37488,783,274 - 88,826,994 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36488,608,657 - 88,652,314 (+)NCBIMGSCv36mm8
Celera487,620,095 - 87,663,899 (+)NCBICelera
Cytogenetic Map4C4NCBI
cM Map442.15NCBI
MTAP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38921,802,636 - 21,941,115 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl921,802,636 - 21,937,651 (+)EnsemblGRCh38hg38GRCh38
GRCh37921,802,635 - 21,941,114 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36921,792,635 - 21,855,970 (+)NCBINCBI36Build 36hg18NCBI36
Build 34921,792,634 - 21,855,967NCBI
Celera921,740,998 - 21,804,334 (+)NCBICelera
Cytogenetic Map9p21.3NCBI
HuRef921,765,963 - 21,829,332 (+)NCBIHuRef
CHM1_1921,802,515 - 21,865,858 (+)NCBICHM1_1
T2T-CHM13v2.0921,816,863 - 21,955,417 (+)NCBIT2T-CHM13v2.0
Mtap
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85108,990,270 - 109,036,494 (+)NCBIGRCr8
mRatBN7.25103,874,460 - 103,920,684 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5103,873,020 - 103,939,406 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5106,308,258 - 106,354,482 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05108,037,874 - 108,084,086 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05108,118,643 - 108,164,834 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05107,711,077 - 107,777,530 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5107,711,077 - 107,777,530 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05111,679,661 - 111,746,208 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45108,788,725 - 108,861,905 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15108,793,950 - 108,867,131 (+)NCBI
Celera5102,587,860 - 102,654,739 (+)NCBICelera
Cytogenetic Map5q32NCBI
Mtap
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495547212,390,032 - 12,439,206 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495547212,391,399 - 12,439,221 (-)NCBIChiLan1.0ChiLan1.0
MTAP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v211102,620,519 - 102,756,196 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan19102,623,086 - 102,762,138 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0921,637,543 - 21,769,698 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1922,253,357 - 22,316,883 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl922,266,376 - 22,382,218 (+)Ensemblpanpan1.1panPan2
MTAP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11141,148,389 - 41,200,635 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1141,148,404 - 41,264,504 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1139,820,541 - 39,872,745 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01142,090,758 - 42,142,952 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1142,090,124 - 42,142,944 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11140,760,953 - 40,813,082 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01140,648,752 - 40,701,001 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01141,262,101 - 41,314,256 (+)NCBIUU_Cfam_GSD_1.0
Mtap
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947155,762,052 - 155,800,008 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366523,431,171 - 3,472,071 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366523,431,588 - 3,468,770 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MTAP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1200,882,956 - 200,934,445 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11200,882,954 - 200,934,389 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21224,075,795 - 224,126,822 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MTAP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11584,196,548 - 84,198,357 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1257,997,427 - 58,050,241 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604157,778,455 - 57,780,270 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mtap
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473625,778,240 - 25,826,530 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473625,778,191 - 25,826,945 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Mtap
1829 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:453
Count of miRNA genes:340
Interacting mature miRNAs:361
Transcripts:ENSMUST00000058030, ENSMUST00000134429
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11532714Sluc43_msusceptibility to lung cancer 43 (mouse)446642108123127211Mouse
13506251Cytrq1_mcytokine response QTL 1 (mouse)46571808699718086Mouse
4141623W6q13_mweight 6 weeks QTL 13 (mouse)Not determined88982069140468203Mouse
25314312Syncl2_msynaptonemal complex length 2 (mouse)465718237146584457Mouse
1357726Lnopy1_mlens opacity 1 (mouse)Not determined485428838119429037Mouse
11532708Sluc43i_msusceptibility to lung cancer 43i (mouse)474444699108444983Mouse
11532707Sluc43h_msusceptibility to lung cancer 43h (mouse)474444699108444983Mouse
11532706Sluc43c_msusceptibility to lung cancer 43c (mouse)474444699108444983Mouse
27226770Tibl11_mtibia length 11, 10 week (mouse)488518237108357197Mouse
11532705Sluc43b_msusceptibility to lung cancer 43b (mouse)474444699108444983Mouse
10412176Habiir3_mhyperoxic acute lung injury imprinted region 3 (mouse)Not determined48375713094293740Mouse
1302044Nss1_mNOD Sjogren's syndrome 1 (mouse)Not determined471982069105982216Mouse
11532704Sluc43a_msusceptibility to lung cancer 43a (mouse)474444699108444983Mouse
27226766Tibl17_mtibia length 17, 16 week (mouse)488518237108457197Mouse
4141093W3q17_mweight 3 weeks QTL 17 (mouse)Not determined88982069140468203Mouse
1302031Bulb1_mbulb size 1 (mouse)Not determined474033887108034029Mouse
27095939Ulnl9_mulna length 9, 16 week (mouse)465318237118857197Mouse
27095938Ulnl6_mulna length 6, 10 week (mouse)46671823798588237Mouse
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
12904933Edlmmq3_mextensor digitorum longus muscle mass QTL 3 (mouse)481213991115213991Mouse
10043964Obq26_mobesity QTL 26 (mouse)Not determined45904725193047251Mouse
1301556Cd4vts1_mCD4 virgin T cell subset 1 (mouse)Not determined485428838119429037Mouse
26884406Huml3_mhumerus length 3, 10 week (mouse)475618237100157197Mouse
1301823Bmd7_mbone mineral density 7 (mouse)Not determined488982069151654550Mouse
27226801Feml6_mfemur length 6, 5 week (mouse)487518237103257197Mouse
1302204Spm1_msplenomegaly modifier (mouse)Not determined482244395116244582Mouse
11532703Sluc43g_msusceptibility to lung cancer 43g (mouse)474444699108444983Mouse
11532702Sluc43f_msusceptibility to lung cancer 43f (mouse)474444699108444983Mouse
11532701Sluc43e_msusceptibility to lung cancer 43e (mouse)474444699108444983Mouse
1558948Ath8_matherosclerosis 8 (mouse)Not determined445658442105156995Mouse
11532700Sluc43d_msusceptibility to lung cancer 43d (mouse)474444699108444983Mouse
11039517Ltpr4_mLeishmania tropica response 4 (mouse)479365751113365867Mouse
11039504Ltpr4a_mLeishmania tropica response 4a (mouse)479365751113365867Mouse
11039505Ltpr4c_mLeishmania tropica response 4c (mouse)479365751113365867Mouse
1301930Papg1_mpulmonary adenoma progression 1 (mouse)Not determined485781167119781279Mouse
1301033Abbp2_mA/J and C57BL/6 blood pressure 2 (mouse)Not determined45355083993763305Mouse
1357870Pfat1_mpredicted fat percentage 1 (mouse)Not determined46361952697619685Mouse
1302057Pgia27_mproteoglycan induced arthritis 27 (mouse)Not determined470067227104067464Mouse
1301545Gauc_mglucose area under curve (mouse)Not determined476763107110763305Mouse
11039506Ltpr4b_mLeishmania tropica response 4b (mouse)479365751113365867Mouse
27226787Feml14_mfemur length 14, 10 week (mouse)484918237107157197Mouse
10412193Plep_mplasma lepin levels (mouse)Not determined474444699108444983Mouse
27095900Scvln9_msacral vertebrae length 2, 10 week (mouse)468018237107157197Mouse
39128212Lwq21_mliver weight QTL 21 (mouse)488982069140468203Mouse
27226716Metcl2_mmetatarsal-calcaneal length 2, 5 week (mouse)488118237118557197Mouse
26884445Sklq7_mskull length QTL 7, 10 week (mouse)468018237150884457Mouse
26884434Zlq1_mzygomatic length QTL 1, 5 week (mouse)453700000103257197Mouse
26884435Zlq4_mzygomatic length QTL 4, 10 week (mouse)485118237104957197Mouse
1300697Sle2_msystemic lupus erythmatosus susceptibility 2 (mouse)Not determined477957579111957775Mouse
1301597Anxty_manxiety (mouse)Not determined474137574128009280Mouse
26884437Sklq13_mskull length QTL 13, 16 week (mouse)457700000155684457Mouse
12880404Embq1_memotional behavior QTL 1 (mouse)46575720395921546Mouse
4141549W10q10_mweight 10 weeks QTL 10 (mouse)Not determined88982069140468203Mouse
1357895Ctrcts_mcataract severity (mouse)Not determined445709925138342753Mouse
1301190Cd4ts2_mCD4 T cell subset 2 (mouse)Not determined46014527794145424Mouse
26884431Zlq8_mzygomatic length QTL 8, 16 week (mouse)474718237108357197Mouse
1357507Synch2_msynechia 2 (mouse)Not determined46014527794145424Mouse
12879903Berr8_mberghei resistance locus 8 (mouse)46422246098222460Mouse
12879897Berr4_mberghei resistance locus 4 (mouse)471982069105982216Mouse
4142047Mvwf3_mmodifier of von Willebrand factor 3 (mouse)Not determined14010457117072206Mouse
27095934Ulnl2_mulna length 2, 5 week (mouse)45770000094788237Mouse
27226746Metcl8_mmetatarsal-calcaneal length 8, 10 week (mouse)487518237107157197Mouse
12904738Idohtq_miris defect with ocular hypertension QTL (mouse)48075246793112991Mouse
27095924Pglq2_mpelvic girdle length QTL 2, 5 week (mouse)469118237130727311Mouse
27095927Pglq7_mpelvic girdle length QTL 7, 10 week (mouse)488118237108357197Mouse
1300601Tlsr1_mthymic lymphoma suppressor region 1 (mouse)Not determined48860115894957775Mouse
27095921Pglq12_mpelvic girdle length QTL 12, 16 week (mouse)483118237108357197Mouse
27226739Metcl14_mmetatarsal-calcaneal length 14, 16 week (mouse)487518237108357197Mouse
1357561Mbsyd_mmetabolic syndrome (mouse)Not determined466888445100888588Mouse
1301118Bbaa23_mB.burgdorferi-associated arthritis 23 (mouse)Not determined485781167119781279Mouse
11532738Abd1_mautoimmune biliary disease 1 (mouse)488982069116271120Mouse
1301757Tlsr4_mthymic lymphoma suppressor region 4 (mouse)Not determined466757130100757258Mouse
27095917Scvln14_msacral vertebrae length 2, 16 week (mouse)468018237130277062Mouse
4141900Skts-fp1_mskin tumor susceptibility in FVB and PWK 1 (mouse)Not determined453550839124055180Mouse
1300966Pabr2_mplasma apolipoprotein B (human) regulator 2 (mouse)Not determined446332646105801860Mouse
1301739Pitm2_mprion incubation time 2 (mouse)Not determined471982069105982216Mouse
1301867Idd11_minsulin dependent diabetes susceptibility 11 (mouse)Not determined483604870117605006Mouse
26884449Sklq2_mskull length QTL 2, 5 week (mouse)436700000128993793Mouse
27226724Tibw2_mtibia width 2, proximal, 10 week (mouse)443000000108357197Mouse
27095905Scvln3_msacral vertebrae length 2, 5 week (mouse)455600000128993793Mouse

Markers in Region
AI326792  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38489,179,990 - 89,180,126UniSTSGRCm38
MGSCv37488,825,894 - 88,826,030UniSTSGRCm37
Celera487,662,799 - 87,662,935UniSTS
Cytogenetic Map4C4UniSTS
Whitehead/MRC_RH41224.5UniSTS
RH135876  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38489,156,443 - 89,156,565UniSTSGRCm38
MGSCv37488,802,347 - 88,802,469UniSTSGRCm37
Celera487,639,175 - 87,639,297UniSTS
Cytogenetic Map4C4UniSTS


Sequence


Ensembl Acc Id: ENSMUST00000058030   ⟹   ENSMUSP00000061092
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl489,055,359 - 89,099,318 (+)Ensembl
GRCm38.p6 Ensembl489,137,122 - 89,181,081 (+)Ensembl
Ensembl Acc Id: ENSMUST00000204571
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl489,094,611 - 89,097,711 (+)Ensembl
GRCm38.p6 Ensembl489,176,374 - 89,179,474 (+)Ensembl
RefSeq Acc Id: NM_024433   ⟹   NP_077753
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39489,055,607 - 89,099,327 (+)NCBI
GRCm38489,137,370 - 89,181,090 (+)ENTREZGENE
MGSCv37488,783,274 - 88,826,994 (+)RGD
Celera487,620,095 - 87,663,899 (+)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_077753   ⟸   NM_024433
- UniProtKB: Q3TJS4 (UniProtKB/Swiss-Prot),   Q9CQ65 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000061092   ⟸   ENSMUST00000058030

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9CQ65-F1-model_v2 AlphaFold Q9CQ65 1-283 view protein structure

Promoters
RGD ID:6835710
Promoter ID:MM_KWN:38369
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000017624
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36488,783,056 - 88,783,556 (+)MPROMDB
RGD ID:6883824
Promoter ID:EPDNEW_M5363
Type:initiation region
Name:Mtap_1
Description:Mus musculus methylthioadenosine phosphorylase , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38489,137,406 - 89,137,466EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1914152 AgrOrtholog
Ensembl Genes ENSMUSG00000062937 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000058030 ENTREZGENE
  ENSMUST00000058030.10 UniProtKB/Swiss-Prot
Gene3D-CATH 3.40.50.1580 UniProtKB/Swiss-Prot
InterPro MTAP UniProtKB/Swiss-Prot
  Nucleoside_phosphorylase_d UniProtKB/Swiss-Prot
  Nucleoside_phosphorylase_sf UniProtKB/Swiss-Prot
  Purine_phosphorylase-2_CS UniProtKB/Swiss-Prot
KEGG Report mmu:66902 UniProtKB/Swiss-Prot
MGD MGI:1914152 ENTREZGENE
NCBI Gene 66902 ENTREZGENE
PANTHER PTHR42679 UniProtKB/Swiss-Prot
  S-METHYL-5'-THIOADENOSINE PHOSPHORYLASE UniProtKB/Swiss-Prot
Pfam PNP_UDP_1 UniProtKB/Swiss-Prot
PhenoGen Mtap PhenoGen
PROSITE PNP_MTAP_2 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF53167 UniProtKB/Swiss-Prot
UniProt MTAP_MOUSE UniProtKB/Swiss-Prot
  Q3TJS4 ENTREZGENE
  Q9CQ65 ENTREZGENE
UniProt Secondary Q3TJS4 UniProtKB/Swiss-Prot