Dhx58 (DExH-box helicase 58) - Rat Genome Database

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Gene: Dhx58 (DExH-box helicase 58) Mus musculus
Analyze
Symbol: Dhx58
Name: DExH-box helicase 58 (Ensembl:DEXH (Asp-Glu-X-His) box polypeptide 58)
RGD ID: 1320800
MGI Page MGI
Description: Enables double-stranded RNA binding activity. Involved in regulation of innate immune response; regulation of type I interferon production; and response to virus. Acts upstream of or within response to bacterium. Located in cytoplasm. Is expressed in central nervous system and retina. Orthologous to human DHX58 (DExH-box helicase 58).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: ATP-dependent helicase LGP2; ATP-dependent RNA helicase DHX58; B430001I08Rik; D11Lgp; D11Lgp2e; DEXH (Asp-Glu-X-His) box polypeptide 58; dna segment, chr 11, lothar hennighausen 2, expressed; Lgp2; LP; LPG2; probable ATP-dependent helicase LGP2; probable ATP-dependent RNA helicase DHX58; protein D11Lgp2; RIG-I-like receptor 3; RIG-I-like receptor Lgp2; RLR; RLR-3; RNA helicase LGP2; RP23-390D17.5
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911100,585,710 - 100,595,165 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11100,585,710 - 100,595,097 (-)EnsemblGRCm39 Ensembl
GRCm3811100,694,884 - 100,704,271 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11100,694,884 - 100,704,271 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711100,556,198 - 100,565,585 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611100,510,974 - 100,520,361 (-)NCBIMGSCv36mm8
Celera11111,311,383 - 111,320,770 (-)NCBICelera
Cytogenetic Map11DNCBI
cM Map1163.52NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
(-)-alpha-phellandrene  (ISO)
(1->4)-beta-D-glucan  (EXP)
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (ISO)
17beta-estradiol 3-benzoate  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3,4-methylenedioxymethamphetamine  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4-hydroxynon-2-enal  (EXP)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acrylamide  (ISO)
aldehydo-D-glucose  (EXP)
aldrin  (EXP)
all-trans-retinoic acid  (ISO)
alpha-phellandrene  (ISO)
amitrole  (ISO)
amphetamine  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (EXP,ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
butanal  (ISO)
cadmium dichloride  (ISO)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chloroprene  (ISO)
cisplatin  (ISO)
copper(II) sulfate  (EXP)
CU-O LINKAGE  (ISO)
Cuprizon  (ISO)
D-glucose  (EXP)
dexamethasone  (ISO)
diethyl malate  (EXP)
diethyl maleate  (ISO)
diethylstilbestrol  (ISO)
dioxygen  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
entinostat  (ISO)
folic acid  (EXP)
fonofos  (ISO)
fructose  (EXP)
gentamycin  (ISO)
glucose  (EXP)
glyphosate  (EXP)
indometacin  (ISO)
lead diacetate  (EXP)
Licochalcone B  (ISO)
lipopolysaccharide  (EXP,ISO)
metam  (EXP)
N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine  (ISO)
nickel atom  (ISO)
oxaliplatin  (ISO)
ozone  (EXP)
paracetamol  (ISO)
paraquat  (ISO)
parathion  (ISO)
pentachlorophenol  (EXP)
pentanal  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
pirinixic acid  (EXP)
propanal  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
silver atom  (EXP)
silver(0)  (EXP)
succimer  (EXP)
tamoxifen  (EXP)
terbufos  (ISO)
testosterone  (ISO)
tetrachloromethane  (ISO)
tetraphene  (EXP)
titanium dioxide  (EXP)
topotecan  (ISO)
triclosan  (ISO)
Triptolide  (ISO)
trovafloxacin  (EXP)
urethane  (ISO)
valproic acid  (ISO)
zinc sulfate  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
3. Mouse MP Annotation Import Pipeline RGD automated import pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11161808   PMID:11217851   PMID:11735219   PMID:12466851   PMID:12477932   PMID:15747579   PMID:16116171   PMID:16141072   PMID:16141073  
PMID:16210631   PMID:16602821   PMID:17020950   PMID:17475874   PMID:20080593   PMID:21267068   PMID:21525357   PMID:21533147   PMID:21677750   PMID:21703541   PMID:21791617   PMID:21873635  
PMID:22837208   PMID:22841161   PMID:23012479   PMID:23903655   PMID:24434553   PMID:24493823   PMID:24550253   PMID:29032202   PMID:29661858   PMID:30333137   PMID:30795861   PMID:31237466  
PMID:31409781   PMID:33087322   PMID:34343497  


Genomics

Comparative Map Data
Dhx58
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911100,585,710 - 100,595,165 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11100,585,710 - 100,595,097 (-)EnsemblGRCm39 Ensembl
GRCm3811100,694,884 - 100,704,271 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11100,694,884 - 100,704,271 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711100,556,198 - 100,565,585 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611100,510,974 - 100,520,361 (-)NCBIMGSCv36mm8
Celera11111,311,383 - 111,320,770 (-)NCBICelera
Cytogenetic Map11DNCBI
cM Map1163.52NCBI
DHX58
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381742,101,411 - 42,112,714 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1742,101,404 - 42,112,714 (-)EnsemblGRCh38hg38GRCh38
GRCh371740,253,429 - 40,264,732 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361737,506,948 - 37,518,277 (-)NCBINCBI36Build 36hg18NCBI36
Celera1736,908,460 - 36,919,789 (-)NCBICelera
Cytogenetic Map17q21.2NCBI
HuRef1736,018,500 - 36,029,831 (-)NCBIHuRef
CHM1_11740,489,197 - 40,500,526 (-)NCBICHM1_1
T2T-CHM13v2.01742,957,915 - 42,969,232 (-)NCBIT2T-CHM13v2.0
Dhx58
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81086,120,677 - 86,132,095 (-)NCBIGRCr8
mRatBN7.21085,620,352 - 85,631,776 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1085,620,357 - 85,631,525 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1090,656,819 - 90,667,976 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01090,135,311 - 90,146,556 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01085,528,601 - 85,539,768 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01088,599,722 - 88,611,562 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1088,599,680 - 88,611,105 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01088,393,935 - 88,405,328 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41089,630,145 - 89,641,311 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11089,644,843 - 89,655,680 (-)NCBI
Celera1084,336,054 - 84,347,209 (-)NCBICelera
Cytogenetic Map10q31NCBI
Dhx58
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545116,185,510 - 16,191,719 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545116,186,263 - 16,191,928 (-)NCBIChiLan1.0ChiLan1.0
DHX58
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21922,871,281 - 22,882,643 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11724,761,402 - 24,772,741 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01715,203,216 - 15,214,559 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11715,424,444 - 15,435,588 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1715,424,437 - 15,435,582 (+)Ensemblpanpan1.1panPan2
DHX58
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1920,787,470 - 20,795,593 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl920,787,541 - 20,795,361 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha920,248,380 - 20,256,796 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0921,506,211 - 21,514,628 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl921,506,251 - 21,514,678 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1920,291,486 - 20,299,903 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0920,558,608 - 20,567,025 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0920,661,655 - 20,670,075 (+)NCBIUU_Cfam_GSD_1.0
Dhx58
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560220,125,092 - 20,134,409 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649016,940,540 - 16,950,085 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649016,940,776 - 16,949,836 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DHX58
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1220,647,699 - 20,656,683 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11220,647,698 - 20,656,691 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21220,937,850 - 20,946,843 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DHX58
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11664,154,832 - 64,166,480 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1664,154,984 - 64,166,500 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607734,971,770 - 34,983,754 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dhx58
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247951,787,958 - 1,794,692 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247951,787,958 - 1,793,475 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Dhx58
292 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:865
Count of miRNA genes:480
Interacting mature miRNAs:553
Transcripts:ENSMUST00000017974, ENSMUST00000126167, ENSMUST00000132930, ENSMUST00000140543, ENSMUST00000149869, ENSMUST00000150656
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162590826109390826Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166733420100733652Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166733420100733652Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166733420100733652Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166733420100733652Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66733420100733652Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166733420100733652Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168190826101890826Mouse
1558812Rafar_mretinoic acid induced forelimb autopod reduction (mouse)Not determined1170691198104691366Mouse
1301681Sle13_msystematic lupus erythematosus susceptibility 13 (mouse)Not determined1170691198104691366Mouse
1300651Pcyts3_mplasmacytoma susceptibility 3 (mouse)Not determined1170691198104691366Mouse
4141339Nilac2_mnicotine induced locomotor activity 2 (mouse)Not determined1170691198104691366Mouse
1301404Sbmd4_mspinal bone mineral density 4 (mouse)Not determined1172019649106019734Mouse
1301310Tmevd5_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 5 (mouse)Not determined1172726125106726289Mouse
4142348Pstc2_mperiosteal circumference 2 (mouse)Not determined1172818615106818733Mouse
10043866Adip19_madiposity 19 (mouse)Not determined1172818615106818733Mouse
11038695Par8_mpulmonary adenoma resistance 8 (mouse)1177063779111063918Mouse
1301414Heal10_mwound healing/regeneration 10 (mouse)Not determined1177437183111437322Mouse
10045616Heal25_mwound healing/regeneration 25 (mouse)Not determined1177437183111437322Mouse
10413882Moe1_mmodifier of epilepsy 1 (mouse)1177770978111771099Mouse
1301640Lore4_mloss of righting induced by ethanol 4 (mouse)Not determined1179156009107616472Mouse
14746970Manh71_mmandible shape 71 (mouse)1179416257113416257Mouse
10043865T2dm5sa_mtype 2 diabetes mellitus 5 in SMXA RI mice (mouse)Not determined1179813759104502698Mouse
27226758Femd3_mfemur midshaft diameter 3, 5 week (mouse)1180890826101890826Mouse
1300649Crhq1_mcompensatory renal hypertrophy QTL 1 (mouse)Not determined1181574481115574636Mouse
1300766Skull16_mskull morphology 16 (mouse)Not determined1181574481115574636Mouse
10412288Carg4_mCandida albicans resistance gene 4 (mouse)Not determined1181810267115810267Mouse
1301072Eae22_mexperimental allergic encephalomyelitis 22 (mouse)Not determined1182377698116377820Mouse
14747003Mancz9_mmandible centroid size 9 (mouse)1185844911119844911Mouse
15039374Adip29_madiposity 29 (mouse)1186608320120608320Mouse
15039376Bw42_mbody weight QTL 42 (mouse)1186608320120608320Mouse
15014785Mvlq1_mmacrovesicular liver lesion QTL 1 (mouse)1186608320120608320Mouse
27226789Feml16_mfemur length 16, 10 week (mouse)1187490826121873369Mouse
10044007Hbnr14_mHeligmosomoides bakeri nematode resistance 14 (mouse)Not determined1187502600121502698Mouse
1357631Motr1_mmodifier of tubby retinal degeneration 1 (mouse)Not determined1187691198103274115Mouse
11251723Ewc5_methanol withdrawal and consumption 5 (mouse)1189869251121973369Mouse
1558753Ath19_matherosclerosis 19 (mouse)Not determined1191604608121973369Mouse
1302034Pkccl_mprotein kinase C content in lungs (mouse)Not determined1191604608121973369Mouse
10045617Heal26_mwound healing/regeneration 26 (mouse)Not determined1192939373112544554Mouse
1301095El6_mepilepsy 6 (mouse)Not determined1193229183121973369Mouse
4141939Pregq2_mpregnancy QTL 2 (mouse)Not determined1194063779118022724Mouse
27226731Tibmd4_mtibia midshaft diameter 4, 10 week (mouse)1194190826118890826Mouse
4141465Dbm2_mdiabetes modifier 2 (mouse)Not determined94437183118022724Mouse
1301958Alcp18_malcohol preference locus 18 (mouse)Not determined1195403965121973369Mouse
1300944Alcp20_malcohol preference locus 20 (mouse)Not determined1195403965121973369Mouse
1300962Cd8mts4_mCD8 memory T cell subset 4 (mouse)Not determined1196137674121973369Mouse
1301535Pas5b_mpulmonary adenoma susceptibility 5b (mouse)Not determined1196176465108806384Mouse
1301057Nidd4_mnon-insulin-dependent diabetes mellitus 4 (mouse)Not determined1196810136121973369Mouse
12910539Sstapa3_msuseptibility to Staphylococcus aureus infection 3 (mouse)1196897693110603991Mouse
1301983Berr2_mberghei resistance locus 2 (mouse)Not determined1198352609121973369Mouse
10043976Obq33_mobesity QTL 33 (mouse)Not determined1198500469121973369Mouse
10044001Alcw8_malcohol withdrawal 8 (mouse)Not determined1199254187121973369Mouse
11553867Stmm5_mskin tumor modifier of MSM 5 (mouse)11100058103121973369Mouse
11341721Rvfs2_mRift Valley fever susceptibility 2 (mouse)11100254186120887165Mouse

Markers in Region
RH126579  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3811100,704,832 - 100,705,081UniSTSGRCm38
MGSCv3711100,566,146 - 100,566,395UniSTSGRCm37
Celera11111,321,331 - 111,321,580UniSTS
Cytogenetic Map11DUniSTS
cM Map1161.5UniSTS
cM Map1161.4UniSTS
AW212720  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3811100,704,963 - 100,705,085UniSTSGRCm38
MGSCv3711100,566,277 - 100,566,399UniSTSGRCm37
Celera11111,321,462 - 111,321,584UniSTS
Cytogenetic Map11DUniSTS
cM Map1161.4UniSTS
cM Map1161.5UniSTS
Whitehead/MRC_RH111341.6UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000017974   ⟹   ENSMUSP00000017974
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11100,585,710 - 100,595,097 (-)Ensembl
GRCm38.p6 Ensembl11100,694,884 - 100,704,271 (-)Ensembl
RefSeq Acc Id: ENSMUST00000126167
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11100,592,218 - 100,595,079 (-)Ensembl
GRCm38.p6 Ensembl11100,701,392 - 100,704,253 (-)Ensembl
RefSeq Acc Id: ENSMUST00000132930
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11100,593,586 - 100,595,097 (-)Ensembl
GRCm38.p6 Ensembl11100,702,760 - 100,704,271 (-)Ensembl
RefSeq Acc Id: ENSMUST00000140543
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11100,585,889 - 100,587,446 (-)Ensembl
GRCm38.p6 Ensembl11100,695,063 - 100,696,620 (-)Ensembl
RefSeq Acc Id: ENSMUST00000149869
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11100,586,079 - 100,590,061 (-)Ensembl
GRCm38.p6 Ensembl11100,695,253 - 100,699,235 (-)Ensembl
RefSeq Acc Id: ENSMUST00000150656
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11100,592,974 - 100,594,173 (-)Ensembl
GRCm38.p6 Ensembl11100,702,148 - 100,703,347 (-)Ensembl
RefSeq Acc Id: NM_030150   ⟹   NP_084426
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911100,585,710 - 100,595,097 (-)NCBI
GRCm3811100,694,884 - 100,704,271 (-)ENTREZGENE
MGSCv3711100,556,198 - 100,565,585 (-)RGD
Celera11111,311,383 - 111,320,770 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_036157106   ⟹   XP_036012999
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911100,585,710 - 100,595,165 (-)NCBI
Sequence:
RefSeq Acc Id: NP_084426   ⟸   NM_030150
- UniProtKB: A2A5E9 (UniProtKB/Swiss-Prot),   Q9D1X4 (UniProtKB/Swiss-Prot),   Q99J87 (UniProtKB/Swiss-Prot),   Q3U606 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000017974   ⟸   ENSMUST00000017974
RefSeq Acc Id: XP_036012999   ⟸   XM_036157106
- Peptide Label: isoform X1
- UniProtKB: Q3U606 (UniProtKB/TrEMBL)
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q99J87-F1-model_v2 AlphaFold Q99J87 1-678 view protein structure

Promoters
RGD ID:6820720
Promoter ID:MM_KWN:9809
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour
Transcripts:OTTMUST00000004175
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3611100,557,541 - 100,558,492 (-)MPROMDB
RGD ID:6820722
Promoter ID:MM_KWN:9810
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour
Transcripts:OTTMUST00000004174
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3611100,560,191 - 100,560,692 (-)MPROMDB
RGD ID:6820716
Promoter ID:MM_KWN:9811
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Liver,   Lung,   MEF_B6
Transcripts:OTTMUST00000004173
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3611100,564,496 - 100,565,427 (-)MPROMDB
RGD ID:6820717
Promoter ID:MM_KWN:9812
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0
Transcripts:NM_030150,   OTTMUST00000004171,   OTTMUST00000004172
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3611100,565,281 - 100,565,781 (-)MPROMDB
RGD ID:8676720
Promoter ID:EPDNEW_M16390
Type:initiation region
Name:Dhx58_1
Description:Mus musculus DEXH (Asp-Glu-X-His) box polypeptide 58 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3811100,704,259 - 100,704,319EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1931560 AgrOrtholog
Ensembl Genes ENSMUSG00000017830 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000017974 ENTREZGENE
  ENSMUST00000017974.13 UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.1320.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.170.150.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Helicase/UvrB_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Helicase_ATP-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Helicase_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RIG-I_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RLR_C_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RLR_CTR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:80861 UniProtKB/Swiss-Prot
MGD MGI:1931560 ENTREZGENE
NCBI Gene 80861 ENTREZGENE
PANTHER ATP-DEPENDENT RNA HELICASE DHX58-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HELICASE WITH DEATH DOMAIN-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Helicase_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ResIII UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RIG-I_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RIG-I_C-RD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Dhx58 PhenoGen
PROSITE HELICASE_ATP_BIND_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HELICASE_CTER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RLR_CTR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART DEXDc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HELICc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A2A5E9 ENTREZGENE
  DHX58_MOUSE UniProtKB/Swiss-Prot
  Q3U606 ENTREZGENE, UniProtKB/TrEMBL
  Q99J87 ENTREZGENE
  Q9D1X4 ENTREZGENE
UniProt Secondary A2A5E9 UniProtKB/Swiss-Prot
  Q9D1X4 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-06-27 Dhx58  DExH-box helicase 58  Dhx58  DEXH (Asp-Glu-X-His) box polypeptide 58  Symbol and/or name change 5135510 APPROVED