ZNF35 (zinc finger protein 35) - Rat Genome Database

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Gene: ZNF35 (zinc finger protein 35) Homo sapiens
Analyze
Symbol: ZNF35
Name: zinc finger protein 35
RGD ID: 1320503
HGNC Page HGNC:13099
Description: Enables DNA-binding transcription factor activity and sequence-specific DNA binding activity. Predicted to be involved in cellular response to retinoic acid; regulation of transcription by RNA polymerase II; and spermatogenesis. Located in nucleus and perinuclear region of cytoplasm.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: HF.10; HF10; Zfp105; zinc finger protein 35 (clone HF.10); zinc finger protein HF.10
RGD Orthologs
Mouse
Rat
Bonobo
Dog
Pig
Green Monkey
Alliance Genes
More Info more info ...
Related Pseudogenes: AC022106.2   LOC100419545  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38344,646,506 - 44,660,791 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl344,648,732 - 44,660,791 (+)EnsemblGRCh38hg38GRCh38
GRCh37344,690,224 - 44,702,283 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36344,665,237 - 44,677,287 (+)NCBINCBI36Build 36hg18NCBI36
Build 34344,665,258 - 44,677,279NCBI
Celera344,628,226 - 44,640,276 (+)NCBICelera
Cytogenetic Map3p21.31NCBI
HuRef344,734,364 - 44,746,410 (+)NCBIHuRef
CHM1_1344,640,323 - 44,652,371 (+)NCBICHM1_1
T2T-CHM13v2.0344,662,214 - 44,676,499 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. RGD HPO Phenotype Annotation Pipeline RGD automated import pipeline for human HPO-to-gene-to-disease annotations
Additional References at PubMed
PMID:1572646   PMID:2108922   PMID:3380682   PMID:7814019   PMID:8477855   PMID:12477932   PMID:15342556   PMID:15489334   PMID:19274049   PMID:20186958   PMID:20211142   PMID:21244100  
PMID:21832049   PMID:21873635   PMID:26496610   PMID:28514442   PMID:29507755   PMID:30021884   PMID:32296183   PMID:33961781   PMID:36724073   PMID:36949045  


Genomics

Comparative Map Data
ZNF35
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38344,646,506 - 44,660,791 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl344,648,732 - 44,660,791 (+)EnsemblGRCh38hg38GRCh38
GRCh37344,690,224 - 44,702,283 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36344,665,237 - 44,677,287 (+)NCBINCBI36Build 36hg18NCBI36
Build 34344,665,258 - 44,677,279NCBI
Celera344,628,226 - 44,640,276 (+)NCBICelera
Cytogenetic Map3p21.31NCBI
HuRef344,734,364 - 44,746,410 (+)NCBIHuRef
CHM1_1344,640,323 - 44,652,371 (+)NCBICHM1_1
T2T-CHM13v2.0344,662,214 - 44,676,499 (+)NCBIT2T-CHM13v2.0
Zfp105
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399122,752,105 - 122,764,325 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9122,752,137 - 122,760,093 (+)EnsemblGRCm39 Ensembl
GRCm389122,923,039 - 122,935,260 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9122,923,072 - 122,931,028 (+)EnsemblGRCm38mm10GRCm38
MGSCv379122,832,196 - 122,840,146 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369122,771,797 - 122,779,721 (+)NCBIMGSCv36mm8
Celera9123,376,377 - 123,384,323 (+)NCBICelera
Cytogenetic Map9F4NCBI
cM Map973.23NCBI
Zfp105
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88131,444,692 - 131,456,159 (+)NCBIGRCr8
mRatBN7.28122,567,229 - 122,578,696 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8122,567,214 - 122,578,692 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8128,164,012 - 128,174,873 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08126,362,959 - 126,373,820 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08124,191,181 - 124,202,180 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08131,998,787 - 132,009,987 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8131,998,778 - 132,009,981 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08131,153,584 - 131,164,784 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48127,657,734 - 127,669,201 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18127,680,876 - 127,688,929 (+)NCBI
Celera8121,684,379 - 121,695,727 (+)NCBICelera
Cytogenetic Map8q32NCBI
ZNF35
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2244,595,869 - 44,612,501 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1344,600,635 - 44,612,724 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0344,538,624 - 44,550,795 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1345,596,190 - 45,608,182 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl345,598,714 - 45,607,343 (+)Ensemblpanpan1.1panPan2
ZNF35
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12021,319 - 43,809 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2025,846 - 41,516 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2075,737 - 99,807 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02025,019 - 49,099 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2032,083 - 48,976 (-)EnsemblROS_Cfam_1.0 Ensembl
UNSW_CanFamBas_1.02087,459 - 111,536 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02046,754 - 70,834 (-)NCBIUU_Cfam_GSD_1.0
ZNF35
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1327,902,558 - 27,914,479 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11327,902,503 - 27,920,494 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ZNF35
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1226,124,883 - 6,137,710 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl226,127,829 - 6,136,515 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041161,028,420 - 161,049,570 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in ZNF35
18 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NM_006991.3(ZNF197):c.3021C>T (p.Ile1007=) single nucleotide variant Malignant melanoma [RCV000060830] Chr3:44644151 [GRCh38]
Chr3:44685643 [GRCh37]
Chr3:44660647 [NCBI36]
Chr3:3p21.31
not provided
GRCh37/hg19 3p22.2-21.31(chr3:37028313-49929220)x3 copy number gain See cases [RCV000240519] Chr3:37028313..49929220 [GRCh37]
Chr3:3p22.2-21.31
likely pathogenic
GRCh37/hg19 3p26.3-q29(chr3:61892-197851986)x3 copy number gain See cases [RCV000511055] Chr3:61892..197851986 [GRCh37]
Chr3:3p26.3-q29
pathogenic
GRCh37/hg19 3p26.3-q29(chr3:61892-197851986) copy number gain See cases [RCV000512358] Chr3:61892..197851986 [GRCh37]
Chr3:3p26.3-q29
pathogenic
GRCh37/hg19 3p24.3-21.31(chr3:16923595-45249923)x2,3 copy number gain not provided [RCV000682249] Chr3:16923595..45249923 [GRCh37]
Chr3:3p24.3-21.31
pathogenic
GRCh37/hg19 3p26.3-q29(chr3:61495-197838262)x3 copy number gain not provided [RCV000742138] Chr3:61495..197838262 [GRCh37]
Chr3:3p26.3-q29
pathogenic
GRCh37/hg19 3p26.3-q29(chr3:60174-197948027)x3 copy number gain not provided [RCV000742133] Chr3:60174..197948027 [GRCh37]
Chr3:3p26.3-q29
pathogenic
NM_003420.4(ZNF35):c.605A>C (p.Lys202Thr) single nucleotide variant Inborn genetic diseases [RCV003246529] Chr3:44658968 [GRCh38]
Chr3:44700460 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_003420.4(ZNF35):c.1567A>G (p.Thr523Ala) single nucleotide variant Inborn genetic diseases [RCV003239550] Chr3:44659930 [GRCh38]
Chr3:44701422 [GRCh37]
Chr3:3p21.31
uncertain significance
GRCh37/hg19 3p21.31(chr3:44444902-45413927)x1 copy number loss not provided [RCV001005429] Chr3:44444902..45413927 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_003420.4(ZNF35):c.121G>A (p.Glu41Lys) single nucleotide variant Inborn genetic diseases [RCV002859892] Chr3:44651188 [GRCh38]
Chr3:44692680 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_003420.4(ZNF35):c.1300A>C (p.Ile434Leu) single nucleotide variant Inborn genetic diseases [RCV002905650] Chr3:44659663 [GRCh38]
Chr3:44701155 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_003420.4(ZNF35):c.786T>G (p.Ser262Arg) single nucleotide variant Inborn genetic diseases [RCV002974265] Chr3:44659149 [GRCh38]
Chr3:44700641 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_003420.4(ZNF35):c.1019G>A (p.Gly340Glu) single nucleotide variant Inborn genetic diseases [RCV002981163] Chr3:44659382 [GRCh38]
Chr3:44700874 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_003420.4(ZNF35):c.725G>A (p.Arg242Gln) single nucleotide variant Inborn genetic diseases [RCV002887092] Chr3:44659088 [GRCh38]
Chr3:44700580 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_003420.4(ZNF35):c.565A>G (p.Lys189Glu) single nucleotide variant Inborn genetic diseases [RCV002743663] Chr3:44658928 [GRCh38]
Chr3:44700420 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_003420.4(ZNF35):c.608A>G (p.Tyr203Cys) single nucleotide variant Inborn genetic diseases [RCV002712945] Chr3:44658971 [GRCh38]
Chr3:44700463 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_003420.4(ZNF35):c.133G>A (p.Val45Ile) single nucleotide variant Inborn genetic diseases [RCV002935079] Chr3:44651200 [GRCh38]
Chr3:44692692 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_003420.4(ZNF35):c.578A>C (p.Asn193Thr) single nucleotide variant Inborn genetic diseases [RCV002960803] Chr3:44658941 [GRCh38]
Chr3:44700433 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_003420.4(ZNF35):c.1407T>G (p.Asn469Lys) single nucleotide variant Inborn genetic diseases [RCV003215324] Chr3:44659770 [GRCh38]
Chr3:44701262 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_003420.4(ZNF35):c.676G>A (p.Val226Met) single nucleotide variant Inborn genetic diseases [RCV003218218] Chr3:44659039 [GRCh38]
Chr3:44700531 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_003420.4(ZNF35):c.479A>T (p.Asn160Ile) single nucleotide variant Inborn genetic diseases [RCV003185046] Chr3:44658842 [GRCh38]
Chr3:44700334 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_003420.4(ZNF35):c.1264G>A (p.Glu422Lys) single nucleotide variant Inborn genetic diseases [RCV003181109] Chr3:44659627 [GRCh38]
Chr3:44701119 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_003420.4(ZNF35):c.308T>C (p.Leu103Pro) single nucleotide variant Inborn genetic diseases [RCV003188240] Chr3:44652672 [GRCh38]
Chr3:44694164 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_003420.4(ZNF35):c.1133T>C (p.Ile378Thr) single nucleotide variant Inborn genetic diseases [RCV003356888] Chr3:44659496 [GRCh38]
Chr3:44700988 [GRCh37]
Chr3:3p21.31
uncertain significance
NM_003420.4(ZNF35):c.456A>C (p.Leu152Phe) single nucleotide variant Inborn genetic diseases [RCV003368793] Chr3:44658819 [GRCh38]
Chr3:44700311 [GRCh37]
Chr3:3p21.31
uncertain significance
GRCh37/hg19 3p21.31(chr3:44563378-45177006)x3 copy number gain not provided [RCV003484127] Chr3:44563378..45177006 [GRCh37]
Chr3:3p21.31
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1822
Count of miRNA genes:713
Interacting mature miRNAs:798
Transcripts:ENST00000296092, ENST00000396056, ENST00000399560, ENST00000415571, ENST00000432115, ENST00000453164, ENST00000542250
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
ZNF35_8735  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37344,701,512 - 44,702,380UniSTSGRCh37
Build 36344,676,516 - 44,677,384RGDNCBI36
Celera344,639,505 - 44,640,373RGD
HuRef344,745,639 - 44,746,507UniSTS
D3S1751E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37344,699,933 - 44,700,047UniSTSGRCh37
Build 36344,674,937 - 44,675,051RGDNCBI36
Celera344,637,926 - 44,638,040RGD
HuRef344,744,060 - 44,744,174UniSTS
STS-L35269  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37344,702,112 - 44,702,312UniSTSGRCh37
Build 36344,677,116 - 44,677,316RGDNCBI36
Celera344,640,105 - 44,640,305RGD
Cytogenetic Map3p21.32UniSTS
HuRef344,746,239 - 44,746,439UniSTS
GeneMap99-GB4 RH Map3144.99UniSTS
SHGC-76875  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37344,689,718 - 44,689,864UniSTSGRCh37
Build 36344,664,722 - 44,664,868RGDNCBI36
Celera344,627,711 - 44,627,857RGD
Cytogenetic Map3p21UniSTS
Cytogenetic Map3p21.32UniSTS
HuRef344,733,849 - 44,733,995UniSTS
TNG Radiation Hybrid Map328062.0UniSTS
GeneMap99-GB4 RH Map3143.05UniSTS
SHGC-76885  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3p21.32UniSTS
TNG Radiation Hybrid Map328043.0UniSTS
GeneMap99-GB4 RH Map3143.78UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 129 34 51 10 508 11 258 57 158 51 556 207 3 17 30 1
Low 2310 2797 1660 599 1288 439 4093 2129 3573 367 901 1405 171 1 1187 2758 4 2
Below cutoff 159 14 14 150 14 6 11 3 1 2 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_003420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047448866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047448867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047448868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047448869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047448870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054331557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054331558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054331559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054331560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054331561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054347763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054347764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054347765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054347766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054347767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC092046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC099669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC124045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH003302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK300581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK314821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC013597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC015892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP237260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BT006962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT584479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X07289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000296092   ⟹   ENSP00000296092
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl344,648,742 - 44,660,791 (+)Ensembl
RefSeq Acc Id: ENST00000396056   ⟹   ENSP00000379368
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl344,648,732 - 44,660,791 (+)Ensembl
RefSeq Acc Id: ENST00000399560   ⟹   ENSP00000391573
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl344,648,742 - 44,658,878 (+)Ensembl
RefSeq Acc Id: ENST00000415571   ⟹   ENSP00000404354
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl344,648,741 - 44,658,765 (+)Ensembl
RefSeq Acc Id: ENST00000432115   ⟹   ENSP00000404336
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl344,648,741 - 44,652,701 (+)Ensembl
RefSeq Acc Id: ENST00000453164   ⟹   ENSP00000401311
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl344,648,745 - 44,658,895 (+)Ensembl
RefSeq Acc Id: NM_003420   ⟹   NP_003411
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38344,648,732 - 44,660,791 (+)NCBI
GRCh37344,690,108 - 44,702,283 (+)NCBI
Build 36344,665,237 - 44,677,287 (+)NCBI Archive
Celera344,628,226 - 44,640,276 (+)RGD
HuRef344,734,364 - 44,746,410 (+)ENTREZGENE
CHM1_1344,640,323 - 44,652,371 (+)NCBI
T2T-CHM13v2.0344,664,440 - 44,676,499 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047448866   ⟹   XP_047304822
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38344,648,732 - 44,660,791 (+)NCBI
RefSeq Acc Id: XM_047448867   ⟹   XP_047304823
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38344,648,732 - 44,660,791 (+)NCBI
RefSeq Acc Id: XM_047448868   ⟹   XP_047304824
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38344,648,732 - 44,660,791 (+)NCBI
RefSeq Acc Id: XM_047448869   ⟹   XP_047304825
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38344,646,570 - 44,660,791 (+)NCBI
RefSeq Acc Id: XM_047448870   ⟹   XP_047304826
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38344,646,506 - 44,660,791 (+)NCBI
RefSeq Acc Id: XM_054347763   ⟹   XP_054203738
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0344,664,440 - 44,676,499 (+)NCBI
RefSeq Acc Id: XM_054347764   ⟹   XP_054203739
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0344,664,283 - 44,676,499 (+)NCBI
RefSeq Acc Id: XM_054347765   ⟹   XP_054203740
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0344,664,283 - 44,676,499 (+)NCBI
RefSeq Acc Id: XM_054347766   ⟹   XP_054203741
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0344,662,278 - 44,676,499 (+)NCBI
RefSeq Acc Id: XM_054347767   ⟹   XP_054203742
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0344,662,214 - 44,676,499 (+)NCBI
Protein Sequences
Protein RefSeqs NP_003411 (Get FASTA)   NCBI Sequence Viewer  
  XP_047304822 (Get FASTA)   NCBI Sequence Viewer  
  XP_047304823 (Get FASTA)   NCBI Sequence Viewer  
  XP_047304824 (Get FASTA)   NCBI Sequence Viewer  
  XP_047304825 (Get FASTA)   NCBI Sequence Viewer  
  XP_047304826 (Get FASTA)   NCBI Sequence Viewer  
  XP_054187532 (Get FASTA)   NCBI Sequence Viewer  
  XP_054187533 (Get FASTA)   NCBI Sequence Viewer  
  XP_054187534 (Get FASTA)   NCBI Sequence Viewer  
  XP_054187535 (Get FASTA)   NCBI Sequence Viewer  
  XP_054187536 (Get FASTA)   NCBI Sequence Viewer  
  XP_054203738 (Get FASTA)   NCBI Sequence Viewer  
  XP_054203739 (Get FASTA)   NCBI Sequence Viewer  
  XP_054203740 (Get FASTA)   NCBI Sequence Viewer  
  XP_054203741 (Get FASTA)   NCBI Sequence Viewer  
  XP_054203742 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA85451 (Get FASTA)   NCBI Sequence Viewer  
  AAH13597 (Get FASTA)   NCBI Sequence Viewer  
  AAP35608 (Get FASTA)   NCBI Sequence Viewer  
  BAG37343 (Get FASTA)   NCBI Sequence Viewer  
  BAG62280 (Get FASTA)   NCBI Sequence Viewer  
  CAA30268 (Get FASTA)   NCBI Sequence Viewer  
  EAW64715 (Get FASTA)   NCBI Sequence Viewer  
  EAW64716 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000296092.3
  ENSP00000379368
  ENSP00000379368.2
  ENSP00000391573.1
  ENSP00000401311.1
  ENSP00000404336.2
  ENSP00000404354.2
  ENSP00000485695
  ENSP00000486354.1
  ENSP00000486615
  ENSP00000486794
  ENSP00000487042
  ENSP00000487287
GenBank Protein P13682 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_003411   ⟸   NM_003420
- UniProtKB: Q53Y54 (UniProtKB/Swiss-Prot),   B2RBU6 (UniProtKB/Swiss-Prot),   Q96D01 (UniProtKB/Swiss-Prot),   P13682 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSP00000391573   ⟸   ENST00000399560
RefSeq Acc Id: ENSP00000401311   ⟸   ENST00000453164
RefSeq Acc Id: ENSP00000296092   ⟸   ENST00000296092
RefSeq Acc Id: ENSP00000404354   ⟸   ENST00000415571
RefSeq Acc Id: ENSP00000404336   ⟸   ENST00000432115
RefSeq Acc Id: ENSP00000379368   ⟸   ENST00000396056
RefSeq Acc Id: XP_047304826   ⟸   XM_047448870
- Peptide Label: isoform X1
- UniProtKB: Q53Y54 (UniProtKB/Swiss-Prot),   P13682 (UniProtKB/Swiss-Prot),   B2RBU6 (UniProtKB/Swiss-Prot),   Q96D01 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047304825   ⟸   XM_047448869
- Peptide Label: isoform X1
- UniProtKB: Q53Y54 (UniProtKB/Swiss-Prot),   P13682 (UniProtKB/Swiss-Prot),   B2RBU6 (UniProtKB/Swiss-Prot),   Q96D01 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047304822   ⟸   XM_047448866
- Peptide Label: isoform X1
- UniProtKB: Q53Y54 (UniProtKB/Swiss-Prot),   P13682 (UniProtKB/Swiss-Prot),   B2RBU6 (UniProtKB/Swiss-Prot),   Q96D01 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047304823   ⟸   XM_047448867
- Peptide Label: isoform X1
- UniProtKB: Q53Y54 (UniProtKB/Swiss-Prot),   P13682 (UniProtKB/Swiss-Prot),   B2RBU6 (UniProtKB/Swiss-Prot),   Q96D01 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047304824   ⟸   XM_047448868
- Peptide Label: isoform X1
- UniProtKB: Q53Y54 (UniProtKB/Swiss-Prot),   P13682 (UniProtKB/Swiss-Prot),   B2RBU6 (UniProtKB/Swiss-Prot),   Q96D01 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054203742   ⟸   XM_054347767
- Peptide Label: isoform X1
- UniProtKB: Q53Y54 (UniProtKB/Swiss-Prot),   P13682 (UniProtKB/Swiss-Prot),   B2RBU6 (UniProtKB/Swiss-Prot),   Q96D01 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054203741   ⟸   XM_054347766
- Peptide Label: isoform X1
- UniProtKB: Q53Y54 (UniProtKB/Swiss-Prot),   P13682 (UniProtKB/Swiss-Prot),   B2RBU6 (UniProtKB/Swiss-Prot),   Q96D01 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054203739   ⟸   XM_054347764
- Peptide Label: isoform X1
- UniProtKB: Q53Y54 (UniProtKB/Swiss-Prot),   P13682 (UniProtKB/Swiss-Prot),   B2RBU6 (UniProtKB/Swiss-Prot),   Q96D01 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054203740   ⟸   XM_054347765
- Peptide Label: isoform X1
- UniProtKB: Q53Y54 (UniProtKB/Swiss-Prot),   P13682 (UniProtKB/Swiss-Prot),   B2RBU6 (UniProtKB/Swiss-Prot),   Q96D01 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054203738   ⟸   XM_054347763
- Peptide Label: isoform X1
- UniProtKB: Q53Y54 (UniProtKB/Swiss-Prot),   P13682 (UniProtKB/Swiss-Prot),   B2RBU6 (UniProtKB/Swiss-Prot),   Q96D01 (UniProtKB/Swiss-Prot)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P13682-F1-model_v2 AlphaFold P13682 1-527 view protein structure

Promoters
RGD ID:6864130
Promoter ID:EPDNEW_H5230
Type:initiation region
Name:ZNF35_1
Description:zinc finger protein 35
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38344,648,742 - 44,648,802EPDNEW
RGD ID:6801974
Promoter ID:HG_KWN:44679
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000256749,   OTTHUMT00000343848,   OTTHUMT00000343849,   OTTHUMT00000343850,   OTTHUMT00000343851,   UC003CNR.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36344,664,984 - 44,665,484 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:13099 AgrOrtholog
COSMIC ZNF35 COSMIC
Ensembl Genes ENSG00000169981 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSG00000281306 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000296092.7 UniProtKB/TrEMBL
  ENST00000396056 ENTREZGENE
  ENST00000396056.7 UniProtKB/Swiss-Prot
  ENST00000399560.2 UniProtKB/TrEMBL
  ENST00000415571.6 UniProtKB/TrEMBL
  ENST00000432115.6 UniProtKB/TrEMBL
  ENST00000453164.1 UniProtKB/TrEMBL
  ENST00000625394.3 UniProtKB/Swiss-Prot
  ENST00000627641 UniProtKB/TrEMBL
  ENST00000629532 UniProtKB/TrEMBL
  ENST00000629627 UniProtKB/TrEMBL
  ENST00000630364 UniProtKB/TrEMBL
  ENST00000631045 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/Swiss-Prot
GTEx ENSG00000169981 GTEx
  ENSG00000281306 GTEx
HGNC ID HGNC:13099 ENTREZGENE
Human Proteome Map ZNF35 Human Proteome Map
InterPro Znf_C2H2_sf UniProtKB/Swiss-Prot
  Znf_C2H2_type UniProtKB/Swiss-Prot
KEGG Report hsa:7584 UniProtKB/Swiss-Prot
NCBI Gene 7584 ENTREZGENE
OMIM 194533 OMIM
PANTHER FI01120P-RELATED UniProtKB/Swiss-Prot
  ZINC FINGER PROTEIN UniProtKB/Swiss-Prot
Pfam zf-C2H2 UniProtKB/Swiss-Prot
PharmGKB PA37674 PharmGKB
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot
SMART ZnF_C2H2 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF57667 UniProtKB/Swiss-Prot
UniProt B2RBU6 ENTREZGENE
  C9J011_HUMAN UniProtKB/TrEMBL
  C9JGR2_HUMAN UniProtKB/TrEMBL
  C9JGS9_HUMAN UniProtKB/TrEMBL
  P13682 ENTREZGENE
  Q53Y54 ENTREZGENE
  Q96D01 ENTREZGENE
  ZNF35_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary B2RBU6 UniProtKB/Swiss-Prot
  Q53Y54 UniProtKB/Swiss-Prot
  Q96D01 UniProtKB/Swiss-Prot