Tprkb (Tp53rk binding protein) - Rat Genome Database
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Gene: Tprkb (Tp53rk binding protein) Mus musculus
Analyze
Symbol: Tprkb
Name: Tp53rk binding protein
RGD ID: 1320312
MGI Page MGI
Description: Human ortholog(s) of this gene implicated in Galloway-Mowat syndrome 5. Orthologous to human TPRKB (TP53RK binding protein); INTERACTS WITH 1,1-dichloroethene; 1,2-dichloroethane; 1,2-dimethylhydrazine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 0610033G21Rik; 1810034M08Rik; Cgi-121; DRWM; DRWMS1; EKC/KEOPS complex subunit Tprkb; mDRWMS1; Prpk (p53-related protein kinase)-binding protein; TP53RK-binding protein
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39685,888,842 - 85,907,266 (+)NCBIGRCm39mm39
GRCm39 Ensembl685,888,847 - 85,907,266 (+)Ensembl
GRCm38685,911,860 - 85,930,284 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl685,911,865 - 85,930,284 (+)EnsemblGRCm38mm10GRCm38
MGSCv37685,865,713 - 85,880,278 (+)NCBIGRCm37mm9NCBIm37
MGSCv36685,881,391 - 85,895,916 (+)NCBImm8
Celera687,850,066 - 87,864,628 (+)NCBICelera
Cytogenetic Map6C3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (ISO)
cytosol  (IBA,ISO)
EKC/KEOPS complex  (IBA,ISO)
nucleus  (IBA,ISO)

Molecular Function

References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12659830   PMID:14610273   PMID:15065000   PMID:15782199  
PMID:16141072   PMID:16141073   PMID:18799693   PMID:19906978   PMID:21267068   PMID:21677750   PMID:21873635   PMID:28805828   PMID:32325033  


Genomics

Comparative Map Data
Tprkb
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39685,888,842 - 85,907,266 (+)NCBIGRCm39mm39
GRCm39 Ensembl685,888,847 - 85,907,266 (+)Ensembl
GRCm38685,911,860 - 85,930,284 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl685,911,865 - 85,930,284 (+)EnsemblGRCm38mm10GRCm38
MGSCv37685,865,713 - 85,880,278 (+)NCBIGRCm37mm9NCBIm37
MGSCv36685,881,391 - 85,895,916 (+)NCBImm8
Celera687,850,066 - 87,864,628 (+)NCBICelera
Cytogenetic Map6C3NCBI
TPRKB
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl273,729,104 - 73,737,400 (-)EnsemblGRCh38hg38GRCh38
GRCh38273,729,873 - 73,737,345 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37273,957,000 - 73,964,472 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36273,810,509 - 73,818,021 (-)NCBINCBI36hg18NCBI36
Celera273,807,816 - 73,815,378 (-)NCBI
Cytogenetic Map2p13.1NCBI
HuRef273,691,923 - 73,699,485 (-)NCBIHuRef
CHM1_1273,887,711 - 73,895,270 (-)NCBICHM1_1
Tprkb
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24118,342,910 - 118,357,908 (+)NCBI
Rnor_6.0 Ensembl4117,589,591 - 117,603,155 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl4117,780,533 - 117,785,941 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.04117,589,527 - 117,604,481 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04182,345,035 - 182,359,990 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44120,066,138 - 120,079,624 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14120,315,812 - 120,324,100 (+)NCBI
Celera4107,316,394 - 107,329,878 (+)NCBICelera
Cytogenetic Map4q34NCBI
Tprkb
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542411,961,994 - 11,969,610 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542411,961,994 - 11,969,610 (-)NCBIChiLan1.0ChiLan1.0
TPRKB
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12A75,326,512 - 75,334,293 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A75,326,512 - 75,334,271 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02A73,791,353 - 73,801,570 (-)NCBIMhudiblu_PPA_v0panPan3
TPRKB
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1749,245,496 - 49,278,767 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11749,271,845 - 49,278,794 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Tprkb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_00493649117,493,630 - 17,500,779 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TPRKB
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl369,236,352 - 69,243,914 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1369,235,111 - 69,243,709 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2372,437,613 - 72,445,206 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TPRKB
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11433,518,089 - 33,526,122 (+)NCBI
ChlSab1.1 Ensembl1433,521,398 - 33,527,613 (+)Ensembl

Position Markers
D10Mit157.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Cytogenetic Map16B4UniSTS
Cytogenetic Map18E2UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic Map7B2UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map14E2.2UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map6C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map17A1UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map3BUniSTS
Cytogenetic Map8C1UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8E2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map18B1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map14C2UniSTS
Cytogenetic Map6A1UniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map13D2.1UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map17E3UniSTS
Cytogenetic Map11B3UniSTS
Cytogenetic Map1H4UniSTS
Cytogenetic Map6A3UniSTS
Cytogenetic Map5E4-E5UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map13DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map14D1UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map8D3UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map1H2.3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map15D2UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map1C4UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9F3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map9A4UniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map1A5UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map6G1UniSTS
Cytogenetic MapXA2UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map5E2UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map9BUniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map10A4UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1C2UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map1BUniSTS
Cytogenetic Map17A3.1UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map15A2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic Map4A3UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map8A1UniSTS
Cytogenetic Map8A1.1UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map10B1UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map4A1UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map17CUniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map5E3UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map14C1UniSTS
Cytogenetic Map14E5UniSTS
Cytogenetic Map10CUniSTS
Cytogenetic Map18B2UniSTS
Cytogenetic Map2F1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map17A2UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map17B2UniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map13C3UniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map7E3UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map9E3.1UniSTS
Cytogenetic Map15E3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXE3UniSTS
Cytogenetic Map4C4UniSTS
Cytogenetic Map3E3UniSTS
Cytogenetic Map11A4UniSTS
Cytogenetic Map4C5UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map7E1UniSTS
Cytogenetic Map5D-E1UniSTS
Cytogenetic Map5B3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map5A2UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map17E4UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic Map15B3.1UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map6A3.3UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map1E3-E4UniSTS
Cytogenetic Map9F1-F3UniSTS
Cytogenetic Map1C1.1UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map12A2UniSTS
Cytogenetic Map17A3-BUniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map14A3UniSTS
Cytogenetic Map5G1.1UniSTS
Cytogenetic MapXF2-F4UniSTS
Cytogenetic Map7D2UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map10A3UniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map9F1-F2UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map10A2UniSTS
Cytogenetic Map1C1UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map12D3UniSTS
Cytogenetic Map1A3-A5UniSTS
Cytogenetic Map2A2UniSTS
Cytogenetic Map3A1UniSTS
Cytogenetic MapXA3.3UniSTS
Cytogenetic Map16A-B1UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map6B2.3UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic MapXA2-A3.1UniSTS
Cytogenetic Map9A5.3UniSTS
Cytogenetic Map14A2-BUniSTS
Cytogenetic Map8E1-E2UniSTS
Cytogenetic Map8A3UniSTS
Cytogenetic Map1G3-H1UniSTS
Cytogenetic Map8B3-C1UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map8C5UniSTS
Cytogenetic Map8A4UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map14E4UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic MapXF5UniSTS
cM Map1040.0UniSTS
Whitehead Genetic1033.9UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487426034Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396656149Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396656149Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396656149Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396656149Mouse
1558984Cplaq9_mcircadian period of locomotor activity 9 (mouse)Not determined63866962592607450Mouse
1300618Pgia19_mproteoglycan induced arthritis 19 (mouse)Not determined64531405987426034Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
4141028Mclr_mmethylcholanthrene lymphoma resistance (mouse)Not determined5437342788379171Mouse
15039373Adip28_madiposity 28 (mouse)65630821190308211Mouse
15039375Bw41_mbody weight QTL 41 (mouse)65630821190308211Mouse
1558977Skmw10_mskeletal muscle weight 10 (mouse)Not determined65844758392447710Mouse
10043972Obq28_mobesity QTL 28 (mouse)Not determined65854043392540433Mouse
1301740Bwq2_mbody weight QTL 2 (mouse)Not determined66005768094057799Mouse
1301369Im4_mimmunoregulatory 4 (mouse)Not determined66348473897484905Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666713869100714031Mouse
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670425898104426034Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670425898104426034Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670425898104426034Mouse
4141990Etax6_methanol induced ataxia 6 (mouse)Not determined7132262186275719Mouse
1302020Bbaa20_mB.burgdorferi-associated arthritis 20 (mouse)Not determined67132262193464093Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671575060105575178Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671981024105981170Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671981024105981170Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673500000134700000Mouse
1301320Ots1_movarian teratoma susceptibility 1 (mouse)Not determined675447583104503555Mouse
1301571Arrd1_mage-related retinal degeneration 1 (mouse)Not determined67554435692607450Mouse
1300674Nidd3n_mnon-insulin-dependent diabetes mellitus 3 in NSY (mouse)Not determined67554435694225955Mouse
10412195Efw_mepididymal fat weight (mouse)Not determined67554435694225955Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675607306109607450Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675716503109716697Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676463949110464093Mouse
14697704Stsl4_mSalmonella typhimurium susceptibility locus 4 (mouse)67710000090000000Mouse
13824985Alh1_mamplitude of lateral head displacement 1 (mouse)67800000097000000Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678629504121115387Mouse
14696731Pairq1_mP. aeruginosa infection resistance QTL 1 (mouse)681500000102200000Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683713869147052561Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684122513118122513Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1680
Count of miRNA genes:620
Interacting mature miRNAs:769
Transcripts:ENSMUST00000067137, ENSMUST00000089570, ENSMUST00000113751, ENSMUST00000113752, ENSMUST00000113753, ENSMUST00000149026, ENSMUST00000150249
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001170488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001362064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001362065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001362066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001362067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_176842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB052769 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC158679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC161888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK007695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK075592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217515 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC024858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM935112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM948212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY108059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CO424671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000067137   ⟹   ENSMUSP00000063927
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl685,915,747 - 85,930,282 (+)Ensembl
RefSeq Acc Id: ENSMUST00000089570   ⟹   ENSMUSP00000086998
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl685,915,747 - 85,928,520 (+)Ensembl
RefSeq Acc Id: ENSMUST00000113751   ⟹   ENSMUSP00000109380
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl685,915,719 - 85,927,608 (+)Ensembl
RefSeq Acc Id: ENSMUST00000113752   ⟹   ENSMUSP00000109381
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl685,915,755 - 85,929,025 (+)Ensembl
RefSeq Acc Id: ENSMUST00000113753   ⟹   ENSMUSP00000109382
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl685,915,738 - 85,930,284 (+)Ensembl
RefSeq Acc Id: ENSMUST00000149026   ⟹   ENSMUSP00000117259
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl685,915,798 - 85,927,940 (+)Ensembl
RefSeq Acc Id: ENSMUST00000150249
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl685,915,756 - 85,924,616 (+)Ensembl
RefSeq Acc Id: ENSMUST00000200680   ⟹   ENSMUSP00000144160
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl685,911,877 - 85,928,933 (+)Ensembl
RefSeq Acc Id: ENSMUST00000201217
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl685,911,907 - 85,924,377 (+)Ensembl
RefSeq Acc Id: ENSMUST00000201289
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl685,911,891 - 85,915,611 (+)Ensembl
RefSeq Acc Id: ENSMUST00000201939   ⟹   ENSMUSP00000144588
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl685,915,757 - 85,927,891 (+)Ensembl
RefSeq Acc Id: ENSMUST00000202142
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl685,911,865 - 85,915,225 (+)Ensembl
RefSeq Acc Id: ENSMUST00000202588
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl685,914,082 - 85,916,045 (+)Ensembl
RefSeq Acc Id: ENSMUST00000202803   ⟹   ENSMUSP00000144660
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl685,915,738 - 85,928,095 (+)Ensembl
RefSeq Acc Id: NM_001170488   ⟹   NP_001163959
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39685,892,701 - 85,907,266 (+)NCBI
GRCm38685,915,719 - 85,930,284 (+)NCBI
MGSCv37685,865,713 - 85,880,278 (+)RGD
Celera687,850,066 - 87,864,628 (+)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001362064   ⟹   NP_001348993
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39685,888,897 - 85,907,266 (+)NCBI
GRCm38685,911,915 - 85,930,284 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001362065   ⟹   NP_001348994
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39685,892,953 - 85,907,266 (+)NCBI
GRCm38685,915,971 - 85,930,284 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001362066   ⟹   NP_001348995
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39685,892,701 - 85,907,266 (+)NCBI
GRCm38685,915,719 - 85,930,284 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001362067   ⟹   NP_001348996
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39685,892,701 - 85,905,502 (+)NCBI
GRCm38685,915,719 - 85,928,520 (+)NCBI
Sequence:
RefSeq Acc Id: NM_176842   ⟹   NP_789812
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39685,892,701 - 85,907,266 (+)NCBI
GRCm38685,915,719 - 85,930,284 (+)NCBI
MGSCv37685,865,713 - 85,880,278 (+)RGD
Celera687,850,066 - 87,864,628 (+)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006506567   ⟹   XP_006506630
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39685,892,685 - 85,907,260 (+)NCBI
GRCm38685,915,703 - 85,930,278 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017321732   ⟹   XP_017177221
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39685,888,842 - 85,907,260 (+)NCBI
GRCm38685,911,860 - 85,930,278 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030255586   ⟹   XP_030111446
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39685,888,842 - 85,907,260 (+)NCBI
GRCm38685,911,860 - 85,930,278 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030255587   ⟹   XP_030111447
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39685,892,260 - 85,907,260 (+)NCBI
GRCm38685,915,278 - 85,930,278 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_789812   ⟸   NM_176842
- Peptide Label: isoform a
- UniProtKB: Q8QZZ7 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001163959   ⟸   NM_001170488
- Peptide Label: isoform a
- UniProtKB: Q8QZZ7 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006506630   ⟸   XM_006506567
- Peptide Label: isoform X1
- UniProtKB: Q8QZZ7 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017177221   ⟸   XM_017321732
- Peptide Label: isoform X1
- UniProtKB: Q8QZZ7 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_030111446   ⟸   XM_030255586
- Peptide Label: isoform X1
RefSeq Acc Id: NP_001348993   ⟸   NM_001362064
- Peptide Label: isoform a
RefSeq Acc Id: XP_030111447   ⟸   XM_030255587
- Peptide Label: isoform X1
RefSeq Acc Id: NP_001348995   ⟸   NM_001362066
- Peptide Label: isoform a
RefSeq Acc Id: NP_001348996   ⟸   NM_001362067
- Peptide Label: isoform b
RefSeq Acc Id: NP_001348994   ⟸   NM_001362065
- Peptide Label: isoform a
RefSeq Acc Id: ENSMUSP00000144660   ⟸   ENSMUST00000202803
RefSeq Acc Id: ENSMUSP00000109380   ⟸   ENSMUST00000113751
RefSeq Acc Id: ENSMUSP00000109382   ⟸   ENSMUST00000113753
RefSeq Acc Id: ENSMUSP00000109381   ⟸   ENSMUST00000113752
RefSeq Acc Id: ENSMUSP00000063927   ⟸   ENSMUST00000067137
RefSeq Acc Id: ENSMUSP00000117259   ⟸   ENSMUST00000149026
RefSeq Acc Id: ENSMUSP00000086998   ⟸   ENSMUST00000089570
RefSeq Acc Id: ENSMUSP00000144588   ⟸   ENSMUST00000201939
RefSeq Acc Id: ENSMUSP00000144160   ⟸   ENSMUST00000200680

Promoters
RGD ID:6848043
Promoter ID:MM_ACW:41824
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Liver
Transcripts:TPRKB.ASEP07,   TPRKB.JSEP07,   TPRKB.LSEP07,   TPRKB.NSEP07,   TPRKB.OSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36685,861,581 - 85,862,081 (+)MPROMDB
RGD ID:6840117
Promoter ID:MM_KWN:46707
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000113751,   ENSMUST00000113752,   ENSMUST00000113753,   NM_023160,   NM_176842,   OTTMUST00000058259,   OTTMUST00000058261
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36685,864,966 - 85,866,517 (+)MPROMDB
RGD ID:6840109
Promoter ID:MM_KWN:46708
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:UC009CQO.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36685,870,516 - 85,871,016 (+)MPROMDB
RGD ID:6890258
Promoter ID:EPDNEW_M8580
Type:initiation region
Name:Tprkb_1
Description:Mus musculus Tp53rk binding protein , transcript variant 6, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38685,915,746 - 85,915,806EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1917036 AgrOrtholog
Ensembl Genes ENSMUSG00000054226 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000063927 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000086998 UniProtKB/TrEMBL
  ENSMUSP00000109380 UniProtKB/TrEMBL
  ENSMUSP00000109381 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000109382 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000117259 UniProtKB/TrEMBL
  ENSMUSP00000144160 UniProtKB/Swiss-Prot
  ENSMUSP00000144588 UniProtKB/TrEMBL
  ENSMUSP00000144660 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000067137 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000089570 UniProtKB/TrEMBL
  ENSMUST00000113751 UniProtKB/TrEMBL
  ENSMUST00000113752 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000113753 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000149026 UniProtKB/TrEMBL
  ENSMUST00000200680 UniProtKB/Swiss-Prot
  ENSMUST00000201939 UniProtKB/TrEMBL
  ENSMUST00000202803 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH 3.30.2380.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro CGI121/TPRKB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CGI121/TPRKB_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:69786 UniProtKB/Swiss-Prot
MGD MGI:1917036 ENTREZGENE
NCBI Gene 69786 ENTREZGENE
PANTHER PTHR15840 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam CGI-121 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Tprkb PhenoGen
Superfamily-SCOP SSF143870 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0J9YVB8_MOUSE UniProtKB/TrEMBL
  D3YXX8_MOUSE UniProtKB/TrEMBL
  D3Z5E8_MOUSE UniProtKB/TrEMBL
  G3X9K8_MOUSE UniProtKB/TrEMBL
  Q8CHL1_MOUSE UniProtKB/TrEMBL
  Q8QZZ7 ENTREZGENE
  Q8R2M6_MOUSE UniProtKB/TrEMBL
  TPRKB_MOUSE UniProtKB/Swiss-Prot