CD209 (CD209 molecule) - Rat Genome Database

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Gene: CD209 (CD209 molecule) Homo sapiens
Analyze
Symbol: CD209
Name: CD209 molecule
RGD ID: 1320216
HGNC Page HGNC
Description: Exhibits virus receptor activity. Involved in several processes, including B cell adhesion; positive regulation of T cell proliferation; and positive regulation of viral life cycle. Localizes to external side of plasma membrane. Implicated in Coronavirus infectious disease; aspergillosis; dengue disease; human immunodeficiency virus infectious disease (multiple); and tuberculosis (multiple). Biomarker of asthma; pulmonary hypertension; and tuberculosis.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: C-type lectin domain family 4 member L; C-type lectin domain family 4, member L; CD209 antigen; CDSIGN; CLEC4L; DC-SIGN; DC-SIGN1; dendritic cell-specific ICAM-3-grabbing non-integrin 1; dendritic cell-specific intercellular adhesion molecule-3-grabbing non-integrin; dendritic cell-specific intracellular adhesion molecules (ICAM)-3 grabbing non-integrin; HIV gpl20-binding protein; MGC129965
RGD Orthologs
Rat
Dog
Pig
Green Monkey
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
NCBI Annotation Information: Note: This gene has been reviewed for its involvement in coronavirus biology, and is involved in SARS-CoV-2 infection.
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl197,739,993 - 7,747,564 (-)EnsemblGRCh38hg38GRCh38
GRCh38197,739,993 - 7,747,534 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37197,804,879 - 7,812,420 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36197,710,882 - 7,718,406 (-)NCBINCBI36hg18NCBI36
Build 34197,710,881 - 7,718,406NCBI
Celera197,676,294 - 7,683,878 (-)NCBI
Cytogenetic Map19p13.2NCBI
HuRef197,474,941 - 7,482,525 (-)NCBIHuRef
CHM1_1197,804,605 - 7,812,189 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
1. Balboa L, etal., J Leukoc Biol. 2011 Mar 31.
2. Chan KY, etal., Hong Kong Med J. 2010;16(5 Suppl 4):37-42.
3. da Silva RC, etal., Mol Biol Rep. 2014 Aug;41(8):5449-57. doi: 10.1007/s11033-014-3416-y. Epub 2014 May 30.
4. De Paepe ME, etal., Pediatr Dev Pathol. 2011 Jan-Feb;14(1):20-7. Epub 2010 Jan 5.
5. Despr├Ęs P, etal., Med Sci (Paris). 2005 Nov;21(11):905-6. doi: 10.1051/medsci/20052111905.
6. Huang HJ, etal., Mucosal Immunol. 2011 Apr 6.
7. Kashima S, etal., J Gen Virol. 2009 Apr;90(Pt 4):927-934. doi: 10.1099/vir.0.008367-0. Epub 2009 Mar 4.
8. Koizumi Y, etal., AIDS Res Hum Retroviruses. 2007 May;23(5):713-9. doi: 10.1089/aid.2006.0225.
9. Londrigan SL, etal., J Virol. 2011 Mar;85(6):2990-3000. Epub 2010 Dec 29.
10. Oliveira LF, etal., Viral Immunol. 2014 Jun;27(5):245-9. doi: 10.1089/vim.2013.0119. Epub 2014 May 5.
11. OMIM Disease Annotation Pipeline
12. Perros F, etal., Eur Respir J. 2007 Mar;29(3):462-8. Epub 2006 Nov 15.
13. Pipeline to import KEGG annotations from KEGG into RGD
14. RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
15. RGD automated import pipeline for gene-chemical interactions
16. Sainz J, etal., Methods Find Exp Clin Pharmacol. 2010 Dec;32 Suppl A:9-13.
17. Sainz J, etal., PLoS One. 2012;7(2):e32273. doi: 10.1371/journal.pone.0032273. Epub 2012 Feb 27.
18. Sakuntabhai A, etal., Nat Genet. 2005 May;37(5):507-13. doi: 10.1038/ng1550. Epub 2005 Apr 17.
19. Selvaraj P, etal., Infect Genet Evol. 2009 Mar;9(2):256-62. doi: 10.1016/j.meegid.2008.12.003. Epub 2008 Dec 14.
20. Shiba M, etal., PLoS One. 2018 Sep 27;13(9):e0203756. doi: 10.1371/journal.pone.0203756. eCollection 2018.
21. Vannberg FO, etal., PLoS One. 2008 Jan 2;3(1):e1388.
22. Wang L, etal., PLoS Negl Trop Dis. 2011 Jan 4;5(1):e934. doi: 10.1371/journal.pntd.0000934.
23. Zupin L, etal., Mol Immunol. 2016 Aug;76:49-54. doi: 10.1016/j.molimm.2016.06.009. Epub 2016 Jun 24.
Additional References at PubMed
PMID:1518869   PMID:1602151   PMID:10721994   PMID:10721995   PMID:10975799   PMID:11017109   PMID:11257134   PMID:11337487   PMID:11384997   PMID:11588046   PMID:11711593   PMID:11739956  
PMID:11745695   PMID:11799126   PMID:11799181   PMID:11825572   PMID:11825573   PMID:11859097   PMID:11884427   PMID:12021323   PMID:12050176   PMID:12050398   PMID:12083838   PMID:12097593  
PMID:12122001   PMID:12176900   PMID:12223058   PMID:12239306   PMID:12352970   PMID:12421943   PMID:12433371   PMID:12438611   PMID:12456590   PMID:12477932   PMID:12496255   PMID:12502850  
PMID:12515809   PMID:12515819   PMID:12571844   PMID:12574325   PMID:12594843   PMID:12598322   PMID:12609975   PMID:12626400   PMID:12634366   PMID:12645952   PMID:12692233   PMID:12783086  
PMID:12797442   PMID:12836198   PMID:12941144   PMID:12949494   PMID:12960229   PMID:12960240   PMID:14519388   PMID:14576049   PMID:14603101   PMID:14702039   PMID:14707095   PMID:14709546  
PMID:14963164   PMID:14970226   PMID:15043214   PMID:15111305   PMID:15140961   PMID:15184372   PMID:15208262   PMID:15210758   PMID:15215692   PMID:15222882   PMID:15254204   PMID:15319853  
PMID:15371595   PMID:15385553   PMID:15452205   PMID:15479853   PMID:15494514   PMID:15496474   PMID:15509576   PMID:15518824   PMID:15545354   PMID:15564514   PMID:15572157   PMID:15638726  
PMID:15709021   PMID:15728245   PMID:15752559   PMID:15838793   PMID:15845642   PMID:15855154   PMID:15880118   PMID:16051608   PMID:16061998   PMID:16092920   PMID:16099912   PMID:16155001  
PMID:16177066   PMID:16246332   PMID:16252244   PMID:16282604   PMID:16365436   PMID:16379498   PMID:16386217   PMID:16420576   PMID:16424204   PMID:16439540   PMID:16454711   PMID:16469696  
PMID:16501104   PMID:16547227   PMID:16611055   PMID:16641270   PMID:16672549   PMID:16698431   PMID:16797773   PMID:16807379   PMID:16817962   PMID:16839201   PMID:16865785   PMID:16883544  
PMID:16940507   PMID:17001080   PMID:17005819   PMID:17010165   PMID:17041212   PMID:17055357   PMID:17055489   PMID:17056872   PMID:17077296   PMID:17083721   PMID:17145745   PMID:17151103  
PMID:17151939   PMID:17182696   PMID:17202372   PMID:17263871   PMID:17296787   PMID:17312166   PMID:17452477   PMID:17462920   PMID:17496896   PMID:17509452   PMID:17522223   PMID:17530994  
PMID:17611589   PMID:17632570   PMID:17659761   PMID:17703412   PMID:17715238   PMID:17876530   PMID:17913809   PMID:17940955   PMID:17962491   PMID:17999675   PMID:18040049   PMID:18070336  
PMID:18073208   PMID:18076668   PMID:18078989   PMID:18080533   PMID:18082570   PMID:18083206   PMID:18155766   PMID:18171520   PMID:18255039   PMID:18270264   PMID:18285492   PMID:18292560  
PMID:18310320   PMID:18318050   PMID:18337571   PMID:18337829   PMID:18353434   PMID:18354216   PMID:18371209   PMID:18375037   PMID:18405996   PMID:18424363   PMID:18453604   PMID:18458800  
PMID:18473783   PMID:18510454   PMID:18524826   PMID:18597806   PMID:18641344   PMID:18697825   PMID:18772280   PMID:18775666   PMID:18796707   PMID:18802490   PMID:18827881   PMID:18848918  
PMID:19020832   PMID:19046307   PMID:19054934   PMID:19193785   PMID:19230080   PMID:19237024   PMID:19249311   PMID:19258923   PMID:19273246   PMID:19282435   PMID:19386588   PMID:19406479  
PMID:19423540   PMID:19426593   PMID:19460752   PMID:19502234   PMID:19567623   PMID:19681073   PMID:19682628   PMID:19692463   PMID:19718030   PMID:19773555   PMID:19785948   PMID:19803376  
PMID:19818504   PMID:19828628   PMID:19833723   PMID:19851890   PMID:19879650   PMID:19892432   PMID:19942750   PMID:19958673   PMID:20034698   PMID:20080962   PMID:20170964   PMID:20212510  
PMID:20217198   PMID:20304457   PMID:20331378   PMID:20359516   PMID:20362001   PMID:20364151   PMID:20404846   PMID:20406303   PMID:20406964   PMID:20438785   PMID:20470843   PMID:20484510  
PMID:20503287   PMID:20588308   PMID:20594957   PMID:20630938   PMID:20713631   PMID:20829290   PMID:20854332   PMID:20924289   PMID:20932025   PMID:20940323   PMID:21067616   PMID:21078343  
PMID:21081145   PMID:21142800   PMID:21179465   PMID:21239715   PMID:21277928   PMID:21386960   PMID:21515679   PMID:21540232   PMID:21562048   PMID:21562123   PMID:21596034   PMID:21704100  
PMID:21743322   PMID:21785785   PMID:21792086   PMID:21860028   PMID:21922073   PMID:21957147   PMID:21994702   PMID:22013110   PMID:22027159   PMID:22045343   PMID:22061615   PMID:22086389  
PMID:22090124   PMID:22091217   PMID:22102941   PMID:22103833   PMID:22156524   PMID:22163292   PMID:22169718   PMID:22175768   PMID:22205703   PMID:22257062   PMID:22292921   PMID:22338216  
PMID:22396536   PMID:22433013   PMID:22470838   PMID:22553928   PMID:22629172   PMID:22645128   PMID:22653683   PMID:22664939   PMID:22673088   PMID:22675249   PMID:22687513   PMID:22700724  
PMID:22808239   PMID:22842622   PMID:22902397   PMID:22911807   PMID:22934658   PMID:23019323   PMID:23043104   PMID:23124109   PMID:23211775   PMID:23291968   PMID:23294711   PMID:23360500  
PMID:23376485   PMID:23382671   PMID:23388721   PMID:23416198   PMID:23424649   PMID:23460925   PMID:23494988   PMID:23527139   PMID:23554973   PMID:23569139   PMID:23624202   PMID:23627732  
PMID:23692808   PMID:23697368   PMID:23741304   PMID:23751770   PMID:23816300   PMID:23840690   PMID:23966408   PMID:23981064   PMID:24156700   PMID:24183720   PMID:24508075   PMID:24568546  
PMID:24594345   PMID:24620896   PMID:24623090   PMID:24867235   PMID:24886790   PMID:24911936   PMID:24928041   PMID:24935259   PMID:24942581   PMID:25001940   PMID:25011106   PMID:25018023  
PMID:25033082   PMID:25092567   PMID:25121780   PMID:25148534   PMID:25278262   PMID:25402728   PMID:25407434   PMID:25416956   PMID:25450767   PMID:25504222   PMID:25574091   PMID:25642836  
PMID:25679217   PMID:25793526   PMID:25883525   PMID:26018157   PMID:26106150   PMID:26133046   PMID:26186194   PMID:26194765   PMID:26272216   PMID:26398832   PMID:26629951   PMID:26722430  
PMID:26808476   PMID:26837416   PMID:26976925   PMID:27223297   PMID:27309478   PMID:27334579   PMID:27449998   PMID:27539513   PMID:27554335   PMID:27605665   PMID:27859859   PMID:28266028  
PMID:28493491   PMID:28514442   PMID:28607410   PMID:28688767   PMID:28694559   PMID:28751750   PMID:28865053   PMID:28894041   PMID:28898406   PMID:29049918   PMID:29054571   PMID:29140443  
PMID:29368829   PMID:29648611   PMID:29671117   PMID:29892012   PMID:29963041   PMID:30127380   PMID:30348825   PMID:30367528   PMID:30412591   PMID:30999160   PMID:31021550   PMID:31027310  
PMID:31217502   PMID:31283166   PMID:31292524   PMID:31425706   PMID:32060149   PMID:32187550   PMID:32296183   PMID:32374430   PMID:32391004   PMID:32607506   PMID:32660065   PMID:32766577  
PMID:32961144   PMID:33090600   PMID:33590343  


Genomics

Comparative Map Data
CD209
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl197,739,993 - 7,747,564 (-)EnsemblGRCh38hg38GRCh38
GRCh38197,739,993 - 7,747,534 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37197,804,879 - 7,812,420 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36197,710,882 - 7,718,406 (-)NCBINCBI36hg18NCBI36
Build 34197,710,881 - 7,718,406NCBI
Celera197,676,294 - 7,683,878 (-)NCBI
Cytogenetic Map19p13.2NCBI
HuRef197,474,941 - 7,482,525 (-)NCBIHuRef
CHM1_1197,804,605 - 7,812,189 (-)NCBICHM1_1
Cd209
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2121,891,109 - 1,897,559 (-)NCBI
Rnor_6.0 Ensembl122,406,879 - 2,413,324 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0122,406,879 - 2,413,324 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0124,560,987 - 4,567,014 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4122,283,730 - 2,290,484 (+)NCBIRGSC3.4rn4RGSC3.4
Celera123,744,146 - 3,750,549 (-)NCBICelera
Cytogenetic Map12p12NCBI
CD209
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12052,517,759 - 52,542,085 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2052,518,036 - 52,520,942 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2052,321,405 - 52,324,255 (-)NCBI
ROS_Cfam_1.02053,046,667 - 53,049,895 (-)NCBI
UMICH_Zoey_3.12052,250,315 - 52,253,163 (-)NCBI
UNSW_CanFamBas_1.02052,694,052 - 52,696,903 (-)NCBI
UU_Cfam_GSD_1.02052,925,204 - 52,928,055 (-)NCBI
CD209
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl271,394,390 - 71,397,969 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1271,394,414 - 71,397,711 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2271,928,204 - 71,931,502 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CD209
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.167,219,576 - 7,235,755 (-)NCBI
ChlSab1.1 Ensembl67,228,378 - 7,235,208 (-)Ensembl

Position Markers
STS-AA028127  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37197,805,274 - 7,805,465UniSTSGRCh37
Build 36197,711,274 - 7,711,465RGDNCBI36
Celera197,676,689 - 7,676,880RGD
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map19p13UniSTS
HuRef197,475,336 - 7,475,527UniSTS
GeneMap99-GB4 RH Map1948.4UniSTS
RH98479  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37197,804,897 - 7,805,080UniSTSGRCh37
Build 36197,710,897 - 7,711,080RGDNCBI36
Celera197,676,312 - 7,676,495RGD
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map19p13UniSTS
HuRef197,474,959 - 7,475,142UniSTS
GeneMap99-GB4 RH Map1949.74UniSTS
SHGC-149275  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37197,813,073 - 7,813,359UniSTSGRCh37
Build 36197,719,073 - 7,719,359RGDNCBI36
Celera197,684,487 - 7,684,773RGD
Cytogenetic Map19p13UniSTS
HuRef197,483,134 - 7,483,420UniSTS
TNG Radiation Hybrid Map191626.0UniSTS
PMC114396P1  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37197,807,908 - 7,808,109UniSTSGRCh37
Build 36197,713,908 - 7,714,109RGDNCBI36
Celera197,679,322 - 7,679,523RGD
Cytogenetic Map19p13UniSTS
HuRef197,477,969 - 7,478,170UniSTS
CD209_523  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37197,804,750 - 7,805,502UniSTSGRCh37
Build 36197,710,750 - 7,711,502RGDNCBI36
Celera197,676,165 - 7,676,917RGD
HuRef197,474,812 - 7,475,564UniSTS
D1S1423  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map10p12.1-p11.2UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map6p22.3-p21.32UniSTS
Cytogenetic Map6q22.33UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map22q11.22UniSTS
Cytogenetic Map11q13.2-q13.3UniSTS
Cytogenetic Map3q22-q24UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map7q11.2UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map2q32UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map9q12UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map10q23-q24UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map18q22.1UniSTS
Cytogenetic Map13q12UniSTS
Cytogenetic Map10p14-p13UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map11q23-q24UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic Map22cen-q12.3UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map15q11.2-q21.3UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map7q31.1UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map3q25UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map14q31.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map10p15.1UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map2q14UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map1p36.1UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map8q24.11UniSTS
Cytogenetic Map9q22.31UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map4q28UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map1q41-q42UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map20q11.21UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map12p13.1-p12.3UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map1p13.1UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map7q33UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map11q24.1UniSTS
Cytogenetic Map18q23UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map18p11.31UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map18p11.31-p11.21UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map3q13UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map7p21.2UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic Map1q42.1UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map1p34-p33UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map7p14UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map12q24.2UniSTS
Cytogenetic Map20q13UniSTS
Cytogenetic Map19q13.3-q13.4UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map8p23-p22UniSTS
Cytogenetic Map1p12UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map10p12.33UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map3q26UniSTS
Cytogenetic Map9p21.2UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map5q21.3UniSTS
Cytogenetic Map1p36.22UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map3q26.31UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map9q21.11UniSTS
Cytogenetic Map6q22.31UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map22q13.31UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map5p13.3UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map10q22.1UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic Map20p12.3-p11.21UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic MapXq27.2UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map4q31UniSTS
Cytogenetic Map22q13.1-q13.2UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map10q24.3UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map2p13UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map11q22.1UniSTS
Cytogenetic Map12q14.2UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map20q11.21-q11.23UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map21p11.1UniSTS
Cytogenetic Map1p35-p34.3UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map12q24.31-q24.32UniSTS
Cytogenetic Map17q21.1UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map14q32.1UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map4q31.23UniSTS
Cytogenetic Map11p15.3UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map2p22.3UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map11q14UniSTS
Cytogenetic MapXq13.2UniSTS
Cytogenetic Map16p13.12UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map9p12UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map13q33.3UniSTS
Cytogenetic Map15q22-q24UniSTS
Cytogenetic Map14q32.11UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map15q23UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map4p15.31UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map20q13.1UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map10q23.33UniSTS
Cytogenetic Map4q26UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map15q22.1-q22.31UniSTS
Cytogenetic Map1q31-q41UniSTS
Cytogenetic Map6q23.3UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map14q23UniSTS
Cytogenetic Map12q11-q12UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map4q24UniSTS
Cytogenetic Map1p32UniSTS
Cytogenetic Map3p21.1-p14.2UniSTS
Cytogenetic Map12q22-q23.1UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map6q24.2UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map20q11.22-q11.23UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic MapXq13-q21UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map16p13.13UniSTS
Cytogenetic Map10pter-q25.3UniSTS
Cytogenetic Map9p24.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map12q24UniSTS
Cytogenetic Map3q28-q29UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map6p22.2UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map12q24.2-q24.31UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map1q32.2-q41UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map22q11UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map16p13.11UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map9p21UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map11q13.1-q13.3UniSTS
Cytogenetic Map16p13UniSTS
Cytogenetic Map15q26UniSTS
Cytogenetic Map18q21UniSTS
Cytogenetic Map4p15.1-p14UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic Map16q22UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map14q32.2UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map5q33.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map7q32.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map10q26.13UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map15q25.1UniSTS
Cytogenetic Map9p13UniSTS
Cytogenetic Map2p24.2UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map11q12.2UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map1q25.3UniSTS
Cytogenetic Map6p24-p22.3UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map3q21-q24UniSTS
Cytogenetic Map4q13UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map5q21.2UniSTS
Cytogenetic Map4q34.3UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map15q14UniSTS
Cytogenetic Map13q13.3UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map1q31UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map8q24.12UniSTS
Cytogenetic Map15q22UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map13q11-q12UniSTS
Cytogenetic Map10q24.2UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map6q25.2UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map6q14.1UniSTS
Cytogenetic Map3q23-q24UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map6q16.1UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map20pter-p12UniSTS
Cytogenetic MapXp22.11UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic Map7q31.3UniSTS
Cytogenetic Map21q22.13UniSTS
Cytogenetic Map1p21UniSTS
Cytogenetic Map8p11UniSTS
Cytogenetic Map7p14.2UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map18p11.22UniSTS
Cytogenetic Map18q21.33UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map14q22.2UniSTS
Cytogenetic Map20p11.22-p11.1UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map11q12-q13UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map10p11.21UniSTS
Cytogenetic Map6p22-p21UniSTS
Cytogenetic Map17q21.1-q21.3UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map4p15.32UniSTS
Cytogenetic Map1q42.13UniSTS
Cytogenetic Map19q12UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map12p13.2-p12.3UniSTS
Cytogenetic Map9q22.32UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map5q22.2UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map4p15.3UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map12q13.1-q13.2UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map1p31UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map9p22.3UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map8q21.11UniSTS
Cytogenetic Map22q12.1UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map6q22.32UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map5p15.2UniSTS
Cytogenetic Map5q11.2UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map18q12.2UniSTS
Cytogenetic Map14q21.3UniSTS
Cytogenetic Map13q33.1UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map12q23.1UniSTS
Cytogenetic Map16p12.1UniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map5q12.1UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map10q22.3-q23.2UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map4q21.3UniSTS
Cytogenetic Map7p13-p12UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map3q12.1UniSTS
Cytogenetic Map7q21.1-q22UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map3q13.13-q13.2UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map3q26.32UniSTS
Cytogenetic Map15qUniSTS
Cytogenetic Map2p13.2UniSTS
Cytogenetic Map3p12.3UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map3q11.2UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map3q21.1UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map6p24.2UniSTS
Cytogenetic Map20q13.33UniSTS
D8S2279  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map21q22.12UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map15q22.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map17q24.2UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map12q24.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map5q14UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map1q42.12UniSTS
Cytogenetic Map7q21.11UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map6p21.1-p12UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map7p21.3UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map22q11.22UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map1q12UniSTS
Cytogenetic Map8p23UniSTS
Cytogenetic Map11q13.2-q13.3UniSTS
Cytogenetic Map13q14.1-q14.3UniSTS
Cytogenetic Map3q22-q24UniSTS
Cytogenetic Map3q13.1-q13.2UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map17q11UniSTS
Cytogenetic Map17p13.1-p12UniSTS
Cytogenetic Map18q21.33UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map17p12-p11.2UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map2q32UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map3q27UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map10q23-q24UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map14q31-q32UniSTS
Cytogenetic Map5p15.33UniSTS
Cytogenetic Map1q23.2UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map2q32.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map4q32.2UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map5q14.2UniSTS
Cytogenetic Map4q32.1UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map11q14.1UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map3p21.1UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map6q22UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map22q12.3UniSTS
Cytogenetic Map20q11UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map18p11.31UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map1p35.2UniSTS
Cytogenetic MapYp11.2UniSTS
Cytogenetic Map13q13.1UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map18q12UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map3q27.2UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map5p15.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map1q42UniSTS
Cytogenetic Map14q32.11UniSTS
Cytogenetic Map17q21.2-q21.3UniSTS
Cytogenetic Map5q32-q34UniSTS
Cytogenetic Map15q14UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map3q21.2UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map13q14.3UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map10p12UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map14q21.3UniSTS
Cytogenetic Map8p22-p21UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map2p15UniSTS
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Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map4q21UniSTS
Cytogenetic Map13q12.2UniSTS
Cytogenetic Map9q31-q33UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map1q23UniSTS
Cytogenetic Map11q12-q13UniSTS
Cytogenetic Map11q13.3UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map11q12.1UniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map8p21UniSTS
Cytogenetic Map19q13.1-q13.2UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map7q36.2UniSTS
Cytogenetic Map4q32.3UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map10q26.1UniSTS
Cytogenetic Map9q32-q33.3UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q31-q34UniSTS
Cytogenetic Map9q33-q34UniSTS
Cytogenetic Map5q11.2-q13.2UniSTS
Cytogenetic Map13q32UniSTS
Cytogenetic Map9q22.32UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map5q22UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic MapXq13.3UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map3p26.3UniSTS
Cytogenetic Map2q11.1UniSTS
Cytogenetic Map21q11.2UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map15q26.2UniSTS
Cytogenetic Map12q24.23UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map2q31.1-q31.2UniSTS
Cytogenetic MapXp22.31UniSTS
Cytogenetic MapXp21.3UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map3p14.2UniSTS
Cytogenetic Map3q24UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map20q13.2UniSTS
Cytogenetic Map14q11.2-q12UniSTS
Cytogenetic Map3p24UniSTS
Cytogenetic Map12q23.3UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map11q14.3UniSTS
Cytogenetic Map10q25.2UniSTS
Cytogenetic Map3q25.1UniSTS
Cytogenetic Map8q13UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map8q23.3UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map11cen-q12UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map7q22-q31UniSTS
Cytogenetic Map11q22UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map20q13.3-qterUniSTS
Cytogenetic Map1p35-p34UniSTS
Cytogenetic Map4p13-p12UniSTS
Cytogenetic Map10q21-q22UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map7p13-p11.1UniSTS
Cytogenetic Map9q31-q34UniSTS
Cytogenetic Map7q21.1-q22UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map3q13.13-q13.2UniSTS
Cytogenetic MapXp22.13UniSTS
Cytogenetic Map13q12.12UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map1pUniSTS
Cytogenetic Map16pUniSTS
Cytogenetic Map15qUniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map2qUniSTS
Cytogenetic Map5q13.1UniSTS
Cytogenetic Map11p14.1UniSTS
Cytogenetic Map4q32UniSTS
Cytogenetic Map2p22UniSTS
Cytogenetic Map5q14.3UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map5q23.2UniSTS
Cytogenetic Map2p24.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map9p21.1UniSTS
Cytogenetic Map9q34.2-q34.3UniSTS

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:5139
Count of miRNA genes:932
Interacting mature miRNAs:1072
Transcripts:ENST00000204801, ENST00000301357, ENST00000315591, ENST00000315599, ENST00000354397, ENST00000394161, ENST00000394173, ENST00000593660, ENST00000593821, ENST00000601256, ENST00000601951, ENST00000602261
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component
High
Medium 272 183 69 12 94 6 492 102 47 20 32 129 7 730 76 1
Low 1997 1877 1350 440 563 293 2871 1500 1502 282 1109 1177 147 1 473 2072 3
Below cutoff 109 923 294 162 1090 157 935 576 2117 106 289 230 16 1 639 2

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_012167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001144893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001144894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001144895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001144896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001144897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001144899 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_021155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_026692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC008763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC008812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF209479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF290886 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF480057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK057212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK293089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK304190 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK308595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK313585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY042221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY042222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY042223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY042224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY042225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY042226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY042227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY042228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY042229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY042231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY042232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY042233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY267333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC110615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CQ796864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CS126908 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EU486858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP696758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP696759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP696760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP696761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP696762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP696763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP696764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP696765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP696766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP696767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP696768 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP696769 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP696770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP696771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP696772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP731981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP731982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP731983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP731984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP731985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP731986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP731987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP731988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP731989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP731990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP731991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP731992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP731993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP731994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP731995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP764921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP764922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP764923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP764924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP764925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP764926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP764927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP764928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP764929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP764930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP764931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP764932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP764933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP764934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KP764935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M98457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000204801   ⟹   ENSP00000204801
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl197,743,039 - 7,747,511 (-)Ensembl
RefSeq Acc Id: ENST00000315591   ⟹   ENSP00000315407
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl197,743,039 - 7,747,511 (-)Ensembl
RefSeq Acc Id: ENST00000315599   ⟹   ENSP00000315477
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl197,739,993 - 7,747,534 (-)Ensembl
RefSeq Acc Id: ENST00000354397   ⟹   ENSP00000346373
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl197,743,039 - 7,747,511 (-)Ensembl
RefSeq Acc Id: ENST00000394161   ⟹   ENSP00000377716
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl197,743,039 - 7,747,511 (-)Ensembl
RefSeq Acc Id: ENST00000394173   ⟹   ENSP00000377728
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl197,742,511 - 7,747,564 (-)Ensembl
RefSeq Acc Id: ENST00000593660   ⟹   ENSP00000470530
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl197,742,647 - 7,747,511 (-)Ensembl
RefSeq Acc Id: ENST00000593821   ⟹   ENSP00000471348
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl197,743,039 - 7,747,511 (-)Ensembl
RefSeq Acc Id: ENST00000601256   ⟹   ENSP00000470658
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl197,743,175 - 7,747,511 (-)Ensembl
RefSeq Acc Id: ENST00000601951   ⟹   ENSP00000468827
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl197,742,850 - 7,747,518 (-)Ensembl
RefSeq Acc Id: ENST00000602261   ⟹   ENSP00000471137
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl197,743,039 - 7,747,511 (-)Ensembl
RefSeq Acc Id: NM_001144893   ⟹   NP_001138365
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38197,739,993 - 7,747,534 (-)NCBI
GRCh37197,804,879 - 7,812,499 (-)NCBI
HuRef197,474,941 - 7,482,525 (-)ENTREZGENE
CHM1_1197,804,605 - 7,812,189 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001144894   ⟹   NP_001138366
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38197,739,993 - 7,747,534 (-)NCBI
GRCh37197,804,879 - 7,812,499 (-)NCBI
HuRef197,474,941 - 7,482,525 (-)ENTREZGENE
CHM1_1197,804,605 - 7,812,189 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001144895   ⟹   NP_001138367
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38197,739,993 - 7,747,534 (-)NCBI
GRCh37197,804,879 - 7,812,499 (-)NCBI
HuRef197,474,941 - 7,482,525 (-)ENTREZGENE
CHM1_1197,804,605 - 7,812,189 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001144896   ⟹   NP_001138368
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38197,739,993 - 7,747,534 (-)NCBI
GRCh37197,804,879 - 7,812,499 (-)NCBI
HuRef197,474,941 - 7,482,525 (-)ENTREZGENE
CHM1_1197,804,605 - 7,812,189 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001144897   ⟹   NP_001138369
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38197,739,993 - 7,747,534 (-)NCBI
GRCh37197,804,879 - 7,812,499 (-)NCBI
HuRef197,474,941 - 7,482,525 (-)ENTREZGENE
CHM1_1197,804,605 - 7,812,189 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001144899   ⟹   NP_001138371
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38197,739,993 - 7,747,534 (-)NCBI
GRCh37197,804,879 - 7,812,499 (-)NCBI
HuRef197,474,941 - 7,482,525 (-)ENTREZGENE
CHM1_1197,804,605 - 7,812,189 (-)NCBI
Sequence:
RefSeq Acc Id: NM_021155   ⟹   NP_066978
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38197,739,993 - 7,747,534 (-)NCBI
GRCh37197,804,879 - 7,812,499 (-)NCBI
Build 36197,710,882 - 7,718,406 (-)NCBI Archive
HuRef197,474,941 - 7,482,525 (-)ENTREZGENE
CHM1_1197,804,605 - 7,812,189 (-)NCBI
Sequence:
RefSeq Acc Id: NR_026692
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38197,739,993 - 7,747,534 (-)NCBI
GRCh37197,804,879 - 7,812,499 (-)NCBI
HuRef197,474,941 - 7,482,525 (-)ENTREZGENE
CHM1_1197,804,605 - 7,812,189 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001138365 (Get FASTA)   NCBI Sequence Viewer  
  NP_001138366 (Get FASTA)   NCBI Sequence Viewer  
  NP_001138367 (Get FASTA)   NCBI Sequence Viewer  
  NP_001138368 (Get FASTA)   NCBI Sequence Viewer  
  NP_001138369 (Get FASTA)   NCBI Sequence Viewer  
  NP_001138371 (Get FASTA)   NCBI Sequence Viewer  
  NP_066978 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAF77072 (Get FASTA)   NCBI Sequence Viewer  
  AAG13814 (Get FASTA)   NCBI Sequence Viewer  
  AAI10616 (Get FASTA)   NCBI Sequence Viewer  
  AAK20997 (Get FASTA)   NCBI Sequence Viewer  
  AAK91846 (Get FASTA)   NCBI Sequence Viewer  
  AAK91847 (Get FASTA)   NCBI Sequence Viewer  
  AAK91848 (Get FASTA)   NCBI Sequence Viewer  
  AAK91849 (Get FASTA)   NCBI Sequence Viewer  
  AAK91850 (Get FASTA)   NCBI Sequence Viewer  
  AAK91851 (Get FASTA)   NCBI Sequence Viewer  
  AAK91852 (Get FASTA)   NCBI Sequence Viewer  
  AAK91853 (Get FASTA)   NCBI Sequence Viewer  
  AAK91854 (Get FASTA)   NCBI Sequence Viewer  
  AAK91856 (Get FASTA)   NCBI Sequence Viewer  
  AAK91857 (Get FASTA)   NCBI Sequence Viewer  
  AAK91858 (Get FASTA)   NCBI Sequence Viewer  
  AKP55605 (Get FASTA)   NCBI Sequence Viewer  
  AKP55606 (Get FASTA)   NCBI Sequence Viewer  
  AKP55607 (Get FASTA)   NCBI Sequence Viewer  
  AKP55608 (Get FASTA)   NCBI Sequence Viewer  
  AKP55609 (Get FASTA)   NCBI Sequence Viewer  
  AKP55610 (Get FASTA)   NCBI Sequence Viewer  
  AKP55611 (Get FASTA)   NCBI Sequence Viewer  
  AKP55612 (Get FASTA)   NCBI Sequence Viewer  
  AKP55613 (Get FASTA)   NCBI Sequence Viewer  
  AKP55614 (Get FASTA)   NCBI Sequence Viewer  
  AKP55615 (Get FASTA)   NCBI Sequence Viewer  
  AKP55616 (Get FASTA)   NCBI Sequence Viewer  
  AKP55617 (Get FASTA)   NCBI Sequence Viewer  
  AKP55618 (Get FASTA)   NCBI Sequence Viewer  
  AKP55619 (Get FASTA)   NCBI Sequence Viewer  
  BAF85778 (Get FASTA)   NCBI Sequence Viewer  
  BAG36354 (Get FASTA)   NCBI Sequence Viewer  
  BAG65070 (Get FASTA)   NCBI Sequence Viewer  
  CAG26528 (Get FASTA)   NCBI Sequence Viewer  
  CAJ18838 (Get FASTA)   NCBI Sequence Viewer  
  EAW68991 (Get FASTA)   NCBI Sequence Viewer  
  EAW68992 (Get FASTA)   NCBI Sequence Viewer  
  EAW68993 (Get FASTA)   NCBI Sequence Viewer  
  EAW68994 (Get FASTA)   NCBI Sequence Viewer  
  EAW68995 (Get FASTA)   NCBI Sequence Viewer  
  EAW68996 (Get FASTA)   NCBI Sequence Viewer  
  EAW68997 (Get FASTA)   NCBI Sequence Viewer  
  EAW68998 (Get FASTA)   NCBI Sequence Viewer  
  EAW68999 (Get FASTA)   NCBI Sequence Viewer  
  EAW69000 (Get FASTA)   NCBI Sequence Viewer  
  EAW69001 (Get FASTA)   NCBI Sequence Viewer  
  Q9NNX6 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_001138365   ⟸   NM_001144893
- Peptide Label: isoform 5
- UniProtKB: Q9NNX6 (UniProtKB/Swiss-Prot),   B2R907 (UniProtKB/TrEMBL),   M0R0P0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001138366   ⟸   NM_001144894
- Peptide Label: isoform 6
- UniProtKB: Q9NNX6 (UniProtKB/Swiss-Prot),   B2R907 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001138368   ⟸   NM_001144896
- Peptide Label: isoform 3
- UniProtKB: Q9NNX6 (UniProtKB/Swiss-Prot),   B2R907 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001138371   ⟸   NM_001144899
- Peptide Label: isoform 8
- UniProtKB: B2R907 (UniProtKB/TrEMBL),   B4E2A8 (UniProtKB/TrEMBL),   X6RB12 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001138367   ⟸   NM_001144895
- Peptide Label: isoform 7
- UniProtKB: Q9NNX6 (UniProtKB/Swiss-Prot),   B2R907 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001138369   ⟸   NM_001144897
- Peptide Label: isoform 4
- UniProtKB: Q9NNX6 (UniProtKB/Swiss-Prot),   B2R907 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_066978   ⟸   NM_021155
- Peptide Label: isoform 1
- UniProtKB: Q9NNX6 (UniProtKB/Swiss-Prot),   B2R907 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000204801   ⟸   ENST00000204801
RefSeq Acc Id: ENSP00000470658   ⟸   ENST00000601256
RefSeq Acc Id: ENSP00000468827   ⟸   ENST00000601951
RefSeq Acc Id: ENSP00000471137   ⟸   ENST00000602261
RefSeq Acc Id: ENSP00000346373   ⟸   ENST00000354397
RefSeq Acc Id: ENSP00000315407   ⟸   ENST00000315591
RefSeq Acc Id: ENSP00000315477   ⟸   ENST00000315599
RefSeq Acc Id: ENSP00000377716   ⟸   ENST00000394161
RefSeq Acc Id: ENSP00000377728   ⟸   ENST00000394173
RefSeq Acc Id: ENSP00000471348   ⟸   ENST00000593821
RefSeq Acc Id: ENSP00000470530   ⟸   ENST00000593660
Protein Domains
C-type lectin

Promoters
RGD ID:7238323
Promoter ID:EPDNEW_H24906
Type:initiation region
Name:CD209_1
Description:CD209 molecule
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38197,747,534 - 7,747,594EPDNEW

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
CD209, -336A-G single nucleotide variant Dengue fever, protection against [RCV000005740]|Human immunodeficiency virus type 1, susceptibility to [RCV000005739]|Mycobacterium tuberculosis, susceptibility to [RCV000005741] Chr19:19p13.3 risk factor|protective
CD209, -871G-A single nucleotide variant Mycobacterium tuberculosis, susceptibility to [RCV000005742] Chr19:19p13.3 risk factor
GRCh38/hg38 19p13.3-13.2(chr19:1972245-9648879)x3 copy number gain See cases [RCV000052879] Chr19:1972245..9648879 [GRCh38]
Chr19:1972244..9759555 [GRCh37]
Chr19:1923244..9620555 [NCBI36]
Chr19:19p13.3-13.2
pathogenic
GRCh38/hg38 19p13.3-13.2(chr19:4039158-9176125)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052881]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052881]|See cases [RCV000052881] Chr19:4039158..9176125 [GRCh38]
Chr19:4039156..9286801 [GRCh37]
Chr19:3990156..9147801 [NCBI36]
Chr19:19p13.3-13.2
pathogenic
GRCh38/hg38 19p13.3-13.2(chr19:265917-8564134)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052876]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052876]|See cases [RCV000052876] Chr19:265917..8564134 [GRCh38]
Chr19:265917..8629018 [GRCh37]
Chr19:216917..8535018 [NCBI36]
Chr19:19p13.3-13.2
pathogenic
GRCh38/hg38 19p13.2(chr19:7194917-7827432)x3 copy number gain See cases [RCV000054108] Chr19:7194917..7827432 [GRCh38]
Chr19:7194928..7892318 [GRCh37]
Chr19:7145928..7798318 [NCBI36]
Chr19:19p13.2
uncertain significance
NM_021155.3(CD209):c.839C>T (p.Ser280Phe) single nucleotide variant Malignant melanoma [RCV000072450] Chr19:7745002 [GRCh38]
Chr19:7809888 [GRCh37]
Chr19:7715888 [NCBI36]
Chr19:19p13.2
not provided
NM_021155.3(CD209):c.228G>A (p.Ala76=) single nucleotide variant Malignant melanoma [RCV000072451] Chr19:7746038 [GRCh38]
Chr19:7810924 [GRCh37]
Chr19:7716924 [NCBI36]
Chr19:19p13.2
not provided
NM_021155.3(CD209):c.130G>A (p.Val44Met) single nucleotide variant Malignant melanoma [RCV000063667] Chr19:7746508 [GRCh38]
Chr19:7811394 [GRCh37]
Chr19:7717394 [NCBI36]
Chr19:19p13.2
not provided
GRCh38/hg38 19p13.2(chr19:7723086-7883268)x3 copy number gain See cases [RCV000139375] Chr19:7723086..7883268 [GRCh38]
Chr19:7787972..7948153 [GRCh37]
Chr19:7693972..7854153 [NCBI36]
Chr19:19p13.2
likely benign
GRCh37/hg19 19p13.3-q13.43(chr19:260912-58956888)x3 copy number gain See cases [RCV000511289] Chr19:260912..58956888 [GRCh37]
Chr19:19p13.3-q13.43
pathogenic|uncertain significance
GRCh37/hg19 19p13.3-q13.43(chr19:260912-58956888) copy number gain See cases [RCV000512296] Chr19:260912..58956888 [GRCh37]
Chr19:19p13.3-q13.43
pathogenic
GRCh37/hg19 19p13.3-13.2(chr19:3120160-9732820)x3 copy number gain not provided [RCV000684096] Chr19:3120160..9732820 [GRCh37]
Chr19:19p13.3-13.2
pathogenic
GRCh37/hg19 19p13.3-q13.43(chr19:260912-59097160)x3 copy number gain not provided [RCV000752444] Chr19:260912..59097160 [GRCh37]
Chr19:19p13.3-q13.43
pathogenic
GRCh37/hg19 19p13.3-q13.43(chr19:68029-59110290)x3 copy number gain not provided [RCV000752439] Chr19:68029..59110290 [GRCh37]
Chr19:19p13.3-q13.43
pathogenic
NC_000019.9:g.(?_7587617)_(8373194_?)dup duplication Hemophagocytic lymphohistiocytosis, familial, 5 [RCV001031629] Chr19:7587617..8373194 [GRCh37]
Chr19:19p13.2
uncertain significance
NM_021155.4(CD209):c.882C>A (p.Ile294=) single nucleotide variant not provided [RCV000927310] Chr19:7744959 [GRCh38]
Chr19:7809845 [GRCh37]
Chr19:19p13.2
likely benign
NM_021155.4(CD209):c.642G>C (p.Glu214Asp) single nucleotide variant not provided [RCV000767920] Chr19:7745624 [GRCh38]
Chr19:7810510 [GRCh37]
Chr19:19p13.2
uncertain significance
NM_021155.4(CD209):c.1185C>T (p.Ala395=) single nucleotide variant not provided [RCV000961597] Chr19:7743069 [GRCh38]
Chr19:7807955 [GRCh37]
Chr19:19p13.2
benign
NM_021155.4(CD209):c.993C>T (p.Asp331=) single nucleotide variant not provided [RCV000958443] Chr19:7744127 [GRCh38]
Chr19:7809013 [GRCh37]
Chr19:19p13.2
benign
NM_021155.4(CD209):c.1071G>A (p.Ala357=) single nucleotide variant not provided [RCV000961598] Chr19:7743183 [GRCh38]
Chr19:7808069 [GRCh37]
Chr19:19p13.2
benign
NM_021155.4(CD209):c.566A>T (p.Gln189Leu) single nucleotide variant not provided [RCV001027777] Chr19:7745700 [GRCh38]
Chr19:7810586 [GRCh37]
Chr19:19p13.2
uncertain significance
GRCh37/hg19 19p13.2(chr19:7657490-8569762)x3 copy number gain not provided [RCV001007030] Chr19:7657490..8569762 [GRCh37]
Chr19:19p13.2
uncertain significance

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:1641 AgrOrtholog
COSMIC CD209 COSMIC
Ensembl Genes ENSG00000090659 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSP00000204801 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000315407 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000315477 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000346373 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000377716 UniProtKB/Swiss-Prot
  ENSP00000377728 ENTREZGENE, UniProtKB/TrEMBL
  ENSP00000468827 UniProtKB/Swiss-Prot
  ENSP00000470530 UniProtKB/TrEMBL
  ENSP00000470658 UniProtKB/Swiss-Prot
  ENSP00000471137 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000471348 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENST00000204801 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000315591 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000315599 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000354397 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000394161 UniProtKB/Swiss-Prot
  ENST00000394173 ENTREZGENE, UniProtKB/TrEMBL
  ENST00000593660 UniProtKB/TrEMBL
  ENST00000593821 ENTREZGENE, UniProtKB/TrEMBL
  ENST00000601256 UniProtKB/Swiss-Prot
  ENST00000601951 UniProtKB/Swiss-Prot
  ENST00000602261 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 3.10.100.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000090659 GTEx
HGNC ID HGNC:1641 ENTREZGENE
Human Proteome Map CD209 Human Proteome Map
InterPro C-type_lectin-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C-type_lectin-like/link_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C-type_lectin_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CD209-like_CTLD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CTDL_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:30835 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 30835 ENTREZGENE
OMIM 604672 OMIM
  607948 OMIM
  609423 OMIM
  614371 OMIM
Pfam Lectin_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA26199 PharmGKB
PROSITE C_TYPE_LECTIN_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C_TYPE_LECTIN_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART CLECT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF56436 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B2R907 ENTREZGENE, UniProtKB/TrEMBL
  B4E2A8 ENTREZGENE, UniProtKB/TrEMBL
  CD209_HUMAN UniProtKB/Swiss-Prot
  M0QZG5_HUMAN UniProtKB/TrEMBL
  M0R0P0 ENTREZGENE, UniProtKB/TrEMBL
  Q9NNX6 ENTREZGENE
  X6RB12 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A8KAM4 UniProtKB/Swiss-Prot
  A8MVQ9 UniProtKB/Swiss-Prot
  G5E9C4 UniProtKB/Swiss-Prot
  Q2TB19 UniProtKB/Swiss-Prot
  Q96QP7 UniProtKB/Swiss-Prot
  Q96QP8 UniProtKB/Swiss-Prot
  Q96QP9 UniProtKB/Swiss-Prot
  Q96QQ0 UniProtKB/Swiss-Prot
  Q96QQ1 UniProtKB/Swiss-Prot
  Q96QQ2 UniProtKB/Swiss-Prot
  Q96QQ3 UniProtKB/Swiss-Prot
  Q96QQ4 UniProtKB/Swiss-Prot
  Q96QQ5 UniProtKB/Swiss-Prot
  Q96QQ6 UniProtKB/Swiss-Prot
  Q96QQ7 UniProtKB/Swiss-Prot
  Q96QQ8 UniProtKB/Swiss-Prot