Ypel5 (yippee like 5) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Ypel5 (yippee like 5) Mus musculus
Analyze
Symbol: Ypel5
Name: yippee like 5
RGD ID: 1320114
MGI Page MGI
Description: Predicted to enable metal ion binding activity. Predicted to be located in cytoplasm; cytoskeleton; and nucleus. Predicted to be part of ubiquitin ligase complex. Is expressed in brain; intestine; liver; and neural retina. Orthologous to human YPEL5 (yippee like 5).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2310076K21Rik; CGI-12; CGI-127; protein yippee-like 5; yippee protein homolog; yippee-like 5 (Drosophila)
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391773,143,623 - 73,157,439 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1773,143,448 - 73,158,190 (+)EnsemblGRCm39 Ensembl
GRCm381772,836,628 - 72,850,444 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1772,836,453 - 72,851,195 (+)EnsemblGRCm38mm10GRCm38
MGSCv371773,186,044 - 73,200,535 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361772,741,704 - 72,756,195 (+)NCBIMGSCv36mm8
Celera1777,119,613 - 77,134,035 (+)NCBICelera
Cytogenetic Map17E1.3NCBI
cM Map1744.7NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
(-)-demecolcine  (ISO)
(1->4)-beta-D-glucan  (EXP)
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-hydroxypropanoic acid  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (ISO)
acrolein  (ISO)
acrylamide  (ISO)
aflatoxin B1  (EXP)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
amitrole  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
bortezomib  (ISO)
buspirone  (ISO)
cantharidin  (EXP)
chloropicrin  (ISO)
chrysene  (EXP)
ciguatoxin CTX1B  (EXP)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dicrotophos  (ISO)
diethyl maleate  (EXP)
endosulfan  (ISO)
Enterolactone  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP)
ethyl methanesulfonate  (ISO)
flutamide  (ISO)
formaldehyde  (ISO)
fulvestrant  (ISO)
genistein  (ISO)
gentamycin  (ISO)
glafenine  (ISO)
hydrogen peroxide  (ISO)
indometacin  (ISO)
ketamine  (ISO)
methimazole  (ISO)
methyl methanesulfonate  (ISO)
N(4)-hydroxycytidine  (EXP)
nefazodone  (ISO)
niclosamide  (ISO)
nimesulide  (ISO)
ozone  (ISO)
paracetamol  (ISO)
PCB138  (ISO)
pentachlorophenol  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
phorone  (ISO)
pirinixic acid  (EXP)
rac-lactic acid  (ISO)
resveratrol  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (EXP,ISO)
sulfadimethoxine  (ISO)
temozolomide  (ISO)
tetrachloromethane  (EXP,ISO)
tetraphene  (EXP)
thioacetamide  (ISO)
trovafloxacin  (ISO)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (EXP,ISO)
vincristine  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:15226823   PMID:15489334   PMID:15556292   PMID:15782199   PMID:16141072  
PMID:16141073   PMID:18799693   PMID:20580816   PMID:21873635   PMID:26496610   PMID:27705791  


Genomics

Comparative Map Data
Ypel5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391773,143,623 - 73,157,439 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1773,143,448 - 73,158,190 (+)EnsemblGRCm39 Ensembl
GRCm381772,836,628 - 72,850,444 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1772,836,453 - 72,851,195 (+)EnsemblGRCm38mm10GRCm38
MGSCv371773,186,044 - 73,200,535 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361772,741,704 - 72,756,195 (+)NCBIMGSCv36mm8
Celera1777,119,613 - 77,134,035 (+)NCBICelera
Cytogenetic Map17E1.3NCBI
cM Map1744.7NCBI
YPEL5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38230,147,007 - 30,160,533 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl230,146,941 - 30,160,533 (+)EnsemblGRCh38hg38GRCh38
GRCh37230,369,873 - 30,383,399 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36230,223,332 - 30,236,903 (+)NCBINCBI36Build 36hg18NCBI36
Build 34230,281,478 - 30,295,050NCBI
Celera230,212,614 - 30,226,263 (+)NCBICelera
Cytogenetic Map2p23.1NCBI
HuRef230,108,290 - 30,121,799 (+)NCBIHuRef
CHM1_1230,299,990 - 30,313,638 (+)NCBICHM1_1
T2T-CHM13v2.0230,191,259 - 30,204,786 (+)NCBIT2T-CHM13v2.0
Ypel5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8628,408,079 - 28,423,536 (-)NCBIGRCr8
mRatBN7.2622,656,284 - 22,671,741 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl622,656,285 - 22,671,691 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx622,987,739 - 23,003,146 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0623,303,574 - 23,318,981 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0622,786,551 - 22,801,960 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0624,069,351 - 24,084,758 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl624,064,738 - 24,084,757 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0633,919,768 - 33,935,181 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4622,758,416 - 22,773,823 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1622,761,365 - 22,770,801 (-)NCBI
Celera622,192,616 - 22,208,062 (-)NCBICelera
Cytogenetic Map6q14NCBI
Ypel5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546911,956,047 - 11,967,360 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495546911,955,257 - 11,967,360 (+)NCBIChiLan1.0ChiLan1.0
YPEL5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21296,340,670 - 96,357,111 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A96,344,644 - 96,358,442 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A30,159,573 - 30,173,181 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A30,235,158 - 30,248,880 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A30,235,616 - 30,248,880 (+)Ensemblpanpan1.1panPan2
YPEL5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11723,864,190 - 23,878,510 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1723,655,822 - 23,671,299 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01724,424,349 - 24,439,838 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1724,424,395 - 24,439,837 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11723,730,096 - 23,745,578 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01723,793,160 - 23,808,595 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01723,892,572 - 23,908,036 (+)NCBIUU_Cfam_GSD_1.0
Ypel5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629267,993,978 - 68,007,460 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049364932,832,105 - 2,845,551 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
YPEL5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3109,178,095 - 109,195,586 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13109,178,093 - 109,196,643 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23115,863,173 - 115,881,849 (-)NCBISscrofa10.2Sscrofa10.2susScr3
YPEL5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11477,387,604 - 77,400,935 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1477,389,254 - 77,400,955 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604534,692,466 - 34,705,773 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ypel5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473812,009,537 - 12,027,480 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473812,009,464 - 12,025,001 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ypel5
516 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:744
Count of miRNA genes:457
Interacting mature miRNAs:536
Transcripts:ENSMUST00000045174
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
4141319Hmtb8_mhemostasis and thrombosis rebleeding time 8 (mouse)Not determined4053444774534623Mouse
15039324Nmrs48_mNAFLD-associated magnetic resonance shift 48 (mouse)174093918774939187Mouse
26884428Cvht3_mcranial vault height 3, 5 week (mouse)174651092682407429Mouse
1357754Ahl3_mage related hearing loss 3 (mouse)Not determined175020395784204103Mouse
4141879Chlq9_mcirculating hormone level QTL 9 (mouse)Not determined175175842585758612Mouse
1357532Bmch7_mbone mechanical trait 7 (mouse)Not determined175175842585758612Mouse
1357447Heal13_mwound healing/regeneration 13 (mouse)Not determined175710765191107803Mouse
4141758Pstc5_mperiosteal circumference 5 (mouse)Not determined175710765191107803Mouse
4141011Bmd26_mbone mineral density 26 (mouse)Not determined175710765191107803Mouse
1300735Pgia20_mproteoglycan induced arthritis 20 (mouse)Not determined175710765191107803Mouse
12910536Nrq8a_mnoise-induced hearing loss resistant QTL 8a (mouse)175710765191107803Mouse
12910537Nrq8_mnoise-induced hearing loss resistant QTL 8 (mouse)175710765191107803Mouse
4142201Obrq15_mobesity resistance QTL 15 (mouse)Not determined5753444780885776Mouse
4142414Pregq4_mpregnancy QTL 4 (mouse)Not determined175753444793507179Mouse
4141040Hmtb9_mhemostasis and thrombosis rebleeding time 9 (mouse)Not determined5758908991589197Mouse
1301107Scc4_mcolon tumor susceptibility 4 (mouse)Not determined176230101095294699Mouse
11528551Sluc32_msusceptibility to lung cancer 32 (mouse)176230101095294699Mouse
1302017Aliq3_macute lung injury QTL 3 (mouse)Not determined176388554895294699Mouse
1301728Ffal1_mfree fatty acid level 1 (mouse)Not determined176521493895294699Mouse
14928308Manh82_mmandible shape 82 (mouse)176631524395294699Mouse
13464254Ifvrq3_minfluenza virus resistance QTL 3 (mouse)176795765583908089Mouse
4142256Nilac12_mnicotine induced locomotor activity 12 (mouse)Not determined176894131995294699Mouse
11039500Ltpr7c_mLeishmania tropica response 7c (mouse)177070119895294699Mouse
11039498Ltpr7b_mLeishmania tropica response 7b (mouse)177070119895294699Mouse
11039499Ltpr7a_mLeishmania tropica response 7a (mouse)177070119895294699Mouse
11039514Ltpr7_mLeishmania tropica response 7 (mouse)177070119895294699Mouse
11565819Ppipq1_mprepulse inhibition percentage QTL 1 (mouse)177105765575377655Mouse
4141391Lfnq6_mlung function QTL 6 (mouse)Not determined7217488874125620Mouse

Markers in Region
RH140827  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381772,850,135 - 72,850,355UniSTSGRCm38
MGSCv371773,199,475 - 73,199,695UniSTSGRCm37
Celera1777,132,975 - 77,133,195UniSTS
Cytogenetic Map17E2UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001357368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001357369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001357370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001357371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_027166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006524539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030249885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB098744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC163036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010201 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK046281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169241 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK217637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC025125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC085109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ176693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA556143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000045174   ⟹   ENSMUSP00000037764
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1773,143,448 - 73,158,190 (+)Ensembl
GRCm38.p6 Ensembl1772,836,453 - 72,851,195 (+)Ensembl
RefSeq Acc Id: ENSMUST00000233210   ⟹   ENSMUSP00000156501
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1773,144,308 - 73,157,432 (+)Ensembl
GRCm38.p6 Ensembl1772,837,313 - 72,850,437 (+)Ensembl
RefSeq Acc Id: ENSMUST00000233221   ⟹   ENSMUSP00000156569
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1773,145,366 - 73,153,336 (+)Ensembl
GRCm38.p6 Ensembl1772,838,371 - 72,846,341 (+)Ensembl
RefSeq Acc Id: ENSMUST00000233662   ⟹   ENSMUSP00000156759
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1773,147,926 - 73,153,380 (+)Ensembl
GRCm38.p6 Ensembl1772,840,931 - 72,846,385 (+)Ensembl
RefSeq Acc Id: ENSMUST00000233886   ⟹   ENSMUSP00000156450
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1773,144,531 - 73,155,829 (+)Ensembl
GRCm38.p6 Ensembl1772,837,536 - 72,848,834 (+)Ensembl
RefSeq Acc Id: NM_001357368   ⟹   NP_001344297
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391773,144,531 - 73,157,439 (+)NCBI
GRCm381772,837,536 - 72,850,444 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001357369   ⟹   NP_001344298
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391773,144,531 - 73,157,439 (+)NCBI
GRCm381772,837,536 - 72,850,444 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001357370   ⟹   NP_001344299
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391773,145,043 - 73,157,439 (+)NCBI
GRCm381772,838,048 - 72,850,444 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001357371   ⟹   NP_001344300
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391773,145,043 - 73,157,439 (+)NCBI
GRCm381772,838,048 - 72,850,444 (+)NCBI
Sequence:
RefSeq Acc Id: NM_027166   ⟹   NP_081442
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391773,143,623 - 73,157,439 (+)NCBI
GRCm381772,836,628 - 72,850,444 (+)NCBI
MGSCv371773,186,044 - 73,200,535 (+)RGD
Celera1777,119,613 - 77,134,035 (+)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006524538   ⟹   XP_006524601
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391773,144,247 - 73,157,433 (+)NCBI
GRCm381772,837,252 - 72,850,438 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006524539   ⟹   XP_006524602
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391773,143,699 - 73,157,433 (+)NCBI
GRCm381772,836,704 - 72,850,438 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030249885   ⟹   XP_030105745
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391773,144,247 - 73,157,433 (+)NCBI
GRCm381772,837,722 - 72,850,438 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001344297 (Get FASTA)   NCBI Sequence Viewer  
  NP_001344298 (Get FASTA)   NCBI Sequence Viewer  
  NP_001344299 (Get FASTA)   NCBI Sequence Viewer  
  NP_001344300 (Get FASTA)   NCBI Sequence Viewer  
  NP_081442 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524601 (Get FASTA)   NCBI Sequence Viewer  
  XP_006524602 (Get FASTA)   NCBI Sequence Viewer  
  XP_030105745 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH25125 (Get FASTA)   NCBI Sequence Viewer  
  AAH85109 (Get FASTA)   NCBI Sequence Viewer  
  BAB26764 (Get FASTA)   NCBI Sequence Viewer  
  BAC32668 (Get FASTA)   NCBI Sequence Viewer  
  BAC33540 (Get FASTA)   NCBI Sequence Viewer  
  BAC33855 (Get FASTA)   NCBI Sequence Viewer  
  BAD51385 (Get FASTA)   NCBI Sequence Viewer  
  BAE23354 (Get FASTA)   NCBI Sequence Viewer  
  BAE32602 (Get FASTA)   NCBI Sequence Viewer  
  BAE38475 (Get FASTA)   NCBI Sequence Viewer  
  BAE39988 (Get FASTA)   NCBI Sequence Viewer  
  BAE41007 (Get FASTA)   NCBI Sequence Viewer  
  BAE41498 (Get FASTA)   NCBI Sequence Viewer  
  BAE42181 (Get FASTA)   NCBI Sequence Viewer  
  EDL38402 (Get FASTA)   NCBI Sequence Viewer  
  EDL38403 (Get FASTA)   NCBI Sequence Viewer  
  EDL38404 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000037764
  ENSMUSP00000037764.6
  ENSMUSP00000156450
  ENSMUSP00000156450.2
  ENSMUSP00000156501
  ENSMUSP00000156501.2
  ENSMUSP00000156569.2
  ENSMUSP00000156759.2
GenBank Protein P62700 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_081442   ⟸   NM_027166
- Peptide Label: isoform 1
- UniProtKB: Q543T4 (UniProtKB/Swiss-Prot),   P62700 (UniProtKB/Swiss-Prot),   Q3TDV0 (UniProtKB/TrEMBL),   Q3TMG7 (UniProtKB/TrEMBL),   Q65Z92 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006524602   ⟸   XM_006524539
- Peptide Label: isoform X1
- UniProtKB: Q3TDV0 (UniProtKB/TrEMBL),   Q3TMG7 (UniProtKB/TrEMBL),   Q65Z92 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006524601   ⟸   XM_006524538
- Peptide Label: isoform X1
- UniProtKB: Q3TDV0 (UniProtKB/TrEMBL),   Q3TMG7 (UniProtKB/TrEMBL),   Q65Z92 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001344298   ⟸   NM_001357369
- Peptide Label: isoform 1
- UniProtKB: Q543T4 (UniProtKB/Swiss-Prot),   P62700 (UniProtKB/Swiss-Prot),   Q3TDV0 (UniProtKB/TrEMBL),   Q3TMG7 (UniProtKB/TrEMBL),   Q65Z92 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001344297   ⟸   NM_001357368
- Peptide Label: isoform 1
- UniProtKB: Q543T4 (UniProtKB/Swiss-Prot),   P62700 (UniProtKB/Swiss-Prot),   Q3TDV0 (UniProtKB/TrEMBL),   Q3TMG7 (UniProtKB/TrEMBL),   Q65Z92 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030105745   ⟸   XM_030249885
- Peptide Label: isoform X1
- UniProtKB: Q3TDV0 (UniProtKB/TrEMBL),   Q3TMG7 (UniProtKB/TrEMBL),   Q65Z92 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001344300   ⟸   NM_001357371
- Peptide Label: isoform 2
- UniProtKB: Q3TDV0 (UniProtKB/TrEMBL),   Q3TMG7 (UniProtKB/TrEMBL),   Q65Z92 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001344299   ⟸   NM_001357370
- Peptide Label: isoform 1
- UniProtKB: Q543T4 (UniProtKB/Swiss-Prot),   P62700 (UniProtKB/Swiss-Prot),   Q3TDV0 (UniProtKB/TrEMBL),   Q3TMG7 (UniProtKB/TrEMBL),   Q65Z92 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000037764   ⟸   ENSMUST00000045174
RefSeq Acc Id: ENSMUSP00000156759   ⟸   ENSMUST00000233662
RefSeq Acc Id: ENSMUSP00000156501   ⟸   ENSMUST00000233210
RefSeq Acc Id: ENSMUSP00000156569   ⟸   ENSMUST00000233221
RefSeq Acc Id: ENSMUSP00000156450   ⟸   ENSMUST00000233886
Protein Domains
Yippee

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P62700-F1-model_v2 AlphaFold P62700 1-121 view protein structure

Promoters
RGD ID:13676742
Promoter ID:EPDNEW_M22520
Type:initiation region
Name:Ypel5_1
Description:Mus musculus yippee like 5 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M22521  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381772,836,706 - 72,836,766EPDNEW
RGD ID:13676744
Promoter ID:EPDNEW_M22521
Type:single initiation site
Name:Ypel5_2
Description:Mus musculus yippee like 5 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M22520  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381772,838,045 - 72,838,105EPDNEW
RGD ID:6828898
Promoter ID:MM_KWN:24165
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000045174
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361773,185,426 - 73,186,122 (+)MPROMDB
RGD ID:6828899
Promoter ID:MM_KWN:24166
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day3,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:UC008DNF.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361773,186,161 - 73,187,082 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1916937 AgrOrtholog
Ensembl Genes ENSMUSG00000039770 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000045174 ENTREZGENE
  ENSMUST00000045174.7 UniProtKB/Swiss-Prot
  ENSMUST00000233210 ENTREZGENE
  ENSMUST00000233210.2 UniProtKB/Swiss-Prot
  ENSMUST00000233221.2 UniProtKB/TrEMBL
  ENSMUST00000233662.2 UniProtKB/TrEMBL
  ENSMUST00000233886 ENTREZGENE
  ENSMUST00000233886.2 UniProtKB/Swiss-Prot
InterPro Yippee UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Yippee/Mis18/Cereblon UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Yippee_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:383295 UniProtKB/Swiss-Prot
MGD MGI:1916937 ENTREZGENE
NCBI Gene 383295 ENTREZGENE
PANTHER PROTEIN YIPPEE-LIKE 5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR13848 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Yippee-Mis18 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ypel5 PhenoGen
PROSITE YIPPEE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A3B2W458_MOUSE UniProtKB/TrEMBL
  A0A3B2WAX4_MOUSE UniProtKB/TrEMBL
  P62700 ENTREZGENE
  Q3TDV0 ENTREZGENE, UniProtKB/TrEMBL
  Q3TMG7 ENTREZGENE, UniProtKB/TrEMBL
  Q543T4 ENTREZGENE
  Q65Z92 ENTREZGENE, UniProtKB/TrEMBL
  YPEL5_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q543T4 UniProtKB/Swiss-Prot
  Q8R174 UniProtKB/Swiss-Prot
  Q9D6M1 UniProtKB/Swiss-Prot
  Q9UMX7 UniProtKB/Swiss-Prot
  Q9Y3C9 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-10-31 Ypel5  yippee like 5    yippee-like 5 (Drosophila)  Symbol and/or name change 5135510 APPROVED