Guk1 (guanylate kinase 1) - Rat Genome Database

Name: Guk1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Guk1 (guanylate kinase 1) Mus musculus

Analyze

Symbol:

Guk1

Name:

guanylate kinase 1

RGD ID:

1320085

MGI Page

MGI

Description:

Exhibits ATP binding activity and guanylate kinase activity. Involved in purine nucleotide metabolic process. Localizes to cytosol and photoreceptor inner segment. Is expressed in several structures, including alimentary system; genitourinary system; integumental system; nervous system; and sensory organ. Orthologous to human GUK1 (guanylate kinase 1); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 17beta-estradiol.

Type:

protein-coding

RefSeq Status:

VALIDATED

Also known as:

AA409738; AL033299; AL033300; AV026611; Gmk; GMP kinase; guanylate kinase; Guk-1

RGD Orthologs

Human

Rat

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	GUK1 (guanylate kinase 1)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Rattus norvegicus (Norway rat):	Guk1 (guanylate kinase 1)	HGNC	Treefam, EggNOG, NCBI, OMA, HomoloGene, Inparanoid, Panther, OrthoDB, Ensembl
Chinchilla lanigera (long-tailed chinchilla):	Guk1 (guanylate kinase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	GUK1 (guanylate kinase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	GUK1 (guanylate kinase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Guk1 (guanylate kinase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	GUK1 (guanylate kinase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	GUK1 (guanylate kinase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Guk1 (guanylate kinase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Guk1 (guanylate kinase 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|TreeFam)
Homo sapiens (human):	GUK1 (guanylate kinase 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)
Danio rerio (zebrafish):	guk1b (guanylate kinase 1b)	Alliance	DIOPT (PhylomeDB\|Roundup\|TreeFam)
Danio rerio (zebrafish):	guk1a (guanylate kinase 1a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|ZFIN)
Drosophila melanogaster (fruit fly):	CG11811	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)
Saccharomyces cerevisiae (baker's yeast):	GUK1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)
Caenorhabditis elegans (roundworm):	guk-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)

Latest Assembly:

GRCm38 - Mouse Genome Assembly GRCm38

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	59,074,681 - 59,083,033 (-)	NCBI	GRCm39		mm39
GRCm38	11	59,183,855 - 59,192,207 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	59,183,875 - 59,192,212 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	58,997,357 - 59,005,454 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	11	59,000,070 - 59,008,011 (-)	NCBI			mm8
Celera	11	63,948,962 - 63,956,989 (-)	NCBI		Celera
Cytogenetic Map	11	B1.3	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Experimental Diabetes Mellitus (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (EXP)

17alpha-ethynylestradiol (EXP)

17beta-estradiol (EXP)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,6-dinitrotoluene (ISO)

3,3',4,4'-tetrachlorobiphenyl (EXP)

5-azacytidine (ISO)

acetylsalicylic acid (ISO)

acrolein (ISO)

alpha-pinene (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

Benzo[k]fluoranthene (EXP)

bisphenol A (ISO)

calyculin a (EXP)

chloropicrin (ISO)

cisplatin (ISO)

clofibrate (EXP)

dextran sulfate (EXP)

dibutyl phthalate (EXP)

ethanol (ISO)

folic acid (EXP,ISO)

hydralazine (ISO)

lead(0) (ISO)

lead(2+) (ISO)

maneb (EXP)

nickel sulfate (ISO)

nimesulide (ISO)

ozone (ISO)

paraquat (EXP)

pirinixic acid (EXP,ISO)

potassium dichromate (ISO)

tetrachloromethane (EXP)

urethane (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

ATP metabolic process (ISO)

dATP metabolic process (ISO)

dGDP biosynthetic process (ISO)

dGMP metabolic process (ISO)

GDP biosynthetic process (ISO)

GDP-mannose metabolic process (ISO)

glycoprotein transport (ISO)

GMP metabolic process (ISO)

nucleotide phosphorylation (ISO)

phosphorylation (IEA)

purine nucleotide metabolic process (IDA,ISO)

xenobiotic metabolic process (ISO)

Cellular Component

cytoplasm (IEA)

cytosol (IBA,IDA,ISO)

photoreceptor inner segment (IDA)

Molecular Function

ATP binding (IDA)

guanylate kinase activity (IBA,IDA,ISO)

kinase activity (IEA)

nucleoside monophosphate kinase activity (ISO)

nucleotide binding (IEA)

protein binding (ISO)

transferase activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

adenine phoshoribosyltransferase deficiency pathway (ISO)

adenosine monophosphate deaminase deficiency pathway (ISO)

adenylosuccinate lyase deficiency pathway (ISO)

AICA-ribosuria pathway (ISO)

azathioprine pharmacodynamics pathway (ISO)

Kelley-Seegmiller syndrome pathway (ISO)

Lesch-Nyhan syndrome pathway (ISO)

mercaptopurine pharmacodynamics pathway (ISO)

molybdenum cofactor deficiency pathway (ISO)

purine metabolic pathway (IEA,ISO)

purine nucleoside phosphorylase deficiency pathway (ISO)

tioguanine pharmacodynamics pathway (ISO)

xanthinuria type I pathway (ISO)

xanthinuria pathway (ISO)

xanthinuria type II pathway (ISO)

References

References - curated


1.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2.	Liu SQ, etal., World J Gastroenterol. 2007 Apr 14;13(14):2118-24.
3.	MGD data from the GO Consortium
4.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5.	Pipeline to import KEGG annotations from KEGG into RGD
6.	Pipeline to import SMPDB annotations from SMPDB into RGD
7.	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:7671812	PMID:8663313	PMID:10349636	PMID:10922068	PMID:11042159	PMID:11076861	PMID:12036965	PMID:12477932	PMID:12904583	PMID:14610273	PMID:14681479	PMID:15489334
PMID:15782199	PMID:16141072	PMID:16141073	PMID:21267068	PMID:21873635	PMID:26745185	PMID:29515371	PMID:32325033

Genomics

Comparative Map Data

Guk1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	59,074,681 - 59,083,033 (-)	NCBI	GRCm39		mm39
GRCm38	11	59,183,855 - 59,192,207 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	59,183,875 - 59,192,212 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	58,997,357 - 59,005,454 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	11	59,000,070 - 59,008,011 (-)	NCBI			mm8
Celera	11	63,948,962 - 63,956,989 (-)	NCBI		Celera
Cytogenetic Map	11	B1.3	NCBI

GUK1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	1	228,139,962 - 228,148,984 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	1	228,140,084 - 228,148,955 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	1	228,327,785 - 228,336,656 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
GRCh37	1	228,327,668 - 228,336,656 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	226,394,605 - 226,403,275 (+)	NCBI	NCBI36		hg18	NCBI36
Build 34	1	224,634,716 - 224,643,387	NCBI
Celera	1	201,518,174 - 201,526,898 (+)	NCBI
Cytogenetic Map	1	q42.13	NCBI
HuRef	1	198,842,817 - 198,851,685 (+)	NCBI		HuRef
CHM1_1	1	229,600,114 - 229,608,980 (+)	NCBI		CHM1_1

Guk1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	10	43,971,514 - 43,988,658 (-)	NCBI
Rnor_6.0 Ensembl	10	45,535,627 - 45,543,897 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	10	45,535,617 - 45,552,455 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	10	45,291,702 - 45,308,540 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	45,489,304 - 45,497,364 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	10	45,502,968 - 45,510,938 (-)	NCBI
Celera	10	43,234,788 - 43,243,045 (-)	NCBI		Celera
Cytogenetic Map	10	q22	NCBI

Guk1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955581	299,280 - 305,032 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955581	299,010 - 305,032 (-)	NCBI	ChiLan1.0	ChiLan1.0

GUK1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	1	208,753,419 - 208,762,252 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	208,753,657 - 208,765,857 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	1	203,541,866 - 203,550,827 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

GUK1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	14	820,093 - 827,250 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	14	820,048 - 826,694 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Guk1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936864	76,707 - 86,479 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GUK1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	51,241,952 - 51,257,485 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	51,247,665 - 51,257,481 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	53,854,695 - 53,864,531 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GUK1
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	1,579,382 - 1,587,623 (-)	NCBI
ChlSab1.1 Ensembl	25	1,579,610 - 1,587,419 (-)	Ensembl

Guk1
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624937	892,840 - 898,799 (+)	NCBI

Position Markers

AV026611

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	11	59,184,103 - 59,184,485	UniSTS	GRCm38
MGSCv37	11	58,997,605 - 58,997,987	UniSTS	GRCm37
Celera	11	63,949,210 - 63,949,586	UniSTS
Cytogenetic Map	11	B1.3	UniSTS
Whitehead/MRC_RH	11	777.45	UniSTS

RH124198

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	11	59,183,918 - 59,184,027	UniSTS	GRCm38
MGSCv37	11	58,997,420 - 58,997,529	UniSTS	GRCm37
Celera	11	63,949,025 - 63,949,134	UniSTS
Cytogenetic Map	11	B1.3	UniSTS

RH124218

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	11	B1.3	UniSTS

RH125874

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	11	59,183,883 - 59,184,132	UniSTS	GRCm38
MGSCv37	11	58,997,385 - 58,997,634	UniSTS	GRCm37
Celera	11	63,948,990 - 63,949,239	UniSTS
Cytogenetic Map	11	B1.3	UniSTS
Whitehead/MRC_RH	11	778.12	UniSTS

Guk1

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	11	B1.3	UniSTS
cM Map	11		UniSTS

QTLs in Region (GRCm38)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
27226798	Scvln18_m	sacral vertebrae length 2, 16 week (mouse)					11	3300000	60800000	Mouse
26884446	Sklq10_m	skull length QTL 10, 10 week (mouse)					11	3300000	63000000	Mouse
26884453	Sklq16_m	skull length QTL 16, 16 week (mouse)					11	3300000	72800000	Mouse
13208559	Wght10_m	weight 10 (mouse)					11	4000000	89000000	Mouse
13208558	Lgth12_m	body length 12 (mouse)					11	4000000	95000000	Mouse
1300905	Scc6_m	colon tumor susceptibility 6 (mouse)			Not determined		11	6930277	89128908	Mouse
27226738	Metcl11_m	metatarsal-calcaneal length 11, 10 week (mouse)					11	8900000	61500000	Mouse
26884401	Huml4_m	humerus length 4, 10 week (mouse)					11	11600000	68600000	Mouse
27226762	Feml21_m	femur length 21, 16 week (mouse)					11	11800000	66100000	Mouse
4141966	Tailq1_m	tail length QTL 1 (mouse)			Not determined			12318637	68609504	Mouse
1357851	Scfq3_m	subcutaneous fat pad weight QTL 3 (mouse)			Not determined		11	12318637	68609504	Mouse
1357437	Epfq4_m	epididymal fat pad weight QTL 4 (mouse)			Not determined		11	12318637	68609504	Mouse
4141127	W3q4_m	weight 3 weeks QTL 4 (mouse)			Not determined			12318637	68609504	Mouse
4142216	Lgq1_m	late growth QTL 1 (mouse)			Not determined			12318637	68609504	Mouse
4142308	W6q3_m	weight 6 weeks QTL 3 (mouse)			Not determined		11	12318637	68609504	Mouse
4141582	Lgaq1_m	late growth adjusted QTL 1 (mouse)			Not determined			12318637	68609504	Mouse
4142109	W10q2_m	weight 10 weeks QTL 2 (mouse)			Not determined			12318637	68609504	Mouse
4141470	Egq4_m	early growth QTL 4 (mouse)			Not determined			12318637	68609504	Mouse
1357640	Orq2_m	ovulation rate QTL 2 (mouse)			Not determined		11	12318637	68609504	Mouse
1357720	Kidpq1_m	kidney weight percentage QTL 1 (mouse)			Not determined		11	12318637	68609504	Mouse
1559002	Lmrq4_m	Leishmania major resistance QTL 4 (mouse)			Not determined		11	12318637	69794121	Mouse
1357859	Lvrq7_m	liver weight QTL 7 (mouse)			Not determined		11	12318637	118131898	Mouse
39128214	Lwq20_m	liver weight QTL 20 (mouse)					11	12318637	118131898	Mouse
1558945	Orgwq8_m	organ weight QTL 8 (mouse)			Not determined		11	17106175	67187585	Mouse
10053687	Eae6_m	susceptibility to experimental allergic encephalomyelitis 6 (mouse)			Not determined		11	17831966	68609504	Mouse
4141894	Nidd6k_m	Nidd6 on KK-A (mouse)			Not determined			19174204	97007000	Mouse
10412246	Dfs2_m	dental fluorosis suseptibility 2 (mouse)			Not determined		11	21857364	95990405	Mouse
10044006	Hbnr13_m	Heligmosomoides bakeri nematode resistance 13 (mouse)			Not determined		11	25881799	59881914	Mouse
1357844	Si5lq5_m	serum IGFBP-5 level QTL 5 (mouse)			Not determined		11	28275046	62275149	Mouse
13524848	Ppiq7_m	prepulse inhibition QTL 7 (mouse)					11	28678320	62678320	Mouse
1301426	Desp2_m	despair 2 (mouse)			Not determined		11	28817754	62817873	Mouse
11522752	Cocia18_m	cocaine-induced activity, QTL 18 (mouse)					11	31117382	65117382	Mouse
11059563	Lmr31_m	leishmaniasis resistance 31 (mouse)					11	32209750	66209867	Mouse
1357782	Char8_m	P. chabaudi malaria resistance QTL 8 (mouse)			Not determined		11	35687789	69794161	Mouse
13208569	Bmiq10_m	body mass index QTL 10 (mouse)					11	36000000	85000000	Mouse
1301328	Mol4_m	modifier of LPS-response 4 (mouse)			Not determined		11	36391750	83590530	Mouse
1301788	Lbw8_m	lupus NZB x NZW 8 (mouse)			Not determined		11	36612460	70618665	Mouse
1301896	Tria1_m	T-cell receptor induced activation 1 (mouse)			Not determined		11	36722738	70723028	Mouse
4141853	Skmw17_m	skeletal muscle weight 17 (mouse)			Not determined		11	37190115	71190238	Mouse
4142475	Ity2a_m	immunity to S. typhimurium 2a (mouse)			Not determined		11	37877753	60511890	Mouse
10766457	Nwa3_m	New Zealand White autoimmunity 3 (mouse)					11	38125289	72125383	Mouse
11532698	Sluc36a_m	susceptibility to lung cancer 36a (mouse)					11	42365791	76365904	Mouse
11532699	Sluc36b_m	susceptibility to lung cancer 36b (mouse)					11	42365791	76365904	Mouse
4142300	Ctrq3_m	C. trachomatis resistance QTL 3 (mouse)			Not determined		11	44739211	76963931	Mouse
4141367	Inf1_m	acute ozone induced inflammation (mouse)			Not determined			44739211	113167183	Mouse
4141000	Nidd3_m	non-insulin-dependent diabetes mellitus 3 (mouse)			Not determined			45151201	79151308	Mouse
1302021	Nidd1n_m	non-insulin-dependent diabetes mellitus 1 in NSY (mouse)			Not determined		11	45275046	80087498	Mouse
1357878	Mastr_m	modifier of astrocytoma (mouse)			Not determined		11	45817754	89927907	Mouse
1300765	Bbaa4_m	B.burgdorferi-associated arthritis 4 (mouse)			Not determined		11	46294341	80294436	Mouse
1301988	Bmd11_m	bone mineral density 11 (mouse)			Not determined		11	46428581	80428696	Mouse
1301830	Ssta4_m	susceptibility to Salmonella typhimurium antigens 4 (mouse)			Not determined		11	50187365	84187585	Mouse
13524840	Ppiq9a_m	prepulse inhibition QTL 9a (mouse)					11	52603559	86603559	Mouse
1300774	Pgia7_m	proteoglycan induced arthritis 7 (mouse)			Not determined		11	53499762	87499911	Mouse
4141084	Spqq1_m	sperm quality QTL 1 (mouse)			Not determined			54174844	63428696	Mouse
1302186	Blmpf2_m	bleomycin-induced pulmonary fibrosis 2 (mouse)			Not determined		11	54174844	67187585	Mouse
4142148	Ckdbp2_m	chronic kidney disease blood pressure locus 2 (mouse)			Not determined		11	54190115	65213015	Mouse
4141830	Pregq1_m	pregnancy QTL 1 (mouse)			Not determined		11	54235926	83842826	Mouse
4141875	Etax9_m	ethanol induced ataxia 9 (mouse)			Not determined			55394159	72319101	Mouse
4142121	Tmc1m2_m	Tmc1 modifier 2 (mouse)			Not determined		11	56973201	114267131	Mouse
1300664	Etohcta9_m	ethanol conditioned taste aversion 9 (mouse)			Not determined		11	57863834	91863932	Mouse
10053682	Eae45_m	experimental allergic encephalomyelitis susceptibility 45 (mouse)			Not determined		11	58599729	74863932	Mouse
1300924	Ity2_m	immunity to S. typhimurium 2 (mouse)			Not determined		1	58617204	87804412	Mouse
4141982	Skts-fp2_m	skin tumor susceptibility in FVB and PWK 2 (mouse)			Not determined			58828440	85175703	Mouse

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	1337
Count of miRNA genes:	578
Interacting mature miRNAs:	693
Transcripts:	ENSMUST00000130815, ENSMUST00000151211, ENSMUST00000154386, ENSMUST00000170202, ENSMUST00000170895, ENSMUST00000172714
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001159410	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_008193	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006532245	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006532246	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_030245579	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AK004205	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK013514	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK188284	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL645854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AV050819	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC024625	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY713424	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466628	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CO429095	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EL957688	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U53514	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSMUST00000130815

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	11	59,186,182 - 59,191,812 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000151211

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	11	59,184,110 - 59,185,455 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000154386

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	11	59,184,156 - 59,184,854 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000170202 ⟹ ENSMUSP00000127566

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	11	59,183,875 - 59,191,952 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000170895 ⟹ ENSMUSP00000130214

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	11	59,184,047 - 59,187,741 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000172714 ⟹ ENSMUSP00000134236

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	11	59,186,792 - 59,192,212 (-)	Ensembl

RefSeq Acc Id:

NM_001159410 ⟹ NP_001152882

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	59,074,681 - 59,078,567 (-)	NCBI
GRCm38	11	59,183,855 - 59,187,741 (-)	NCBI
MGSCv37	11	58,997,357 - 59,005,454 (-)	RGD
Celera	11	63,948,962 - 63,956,989 (-)	RGD
cM Map	11		ENTREZGENE

Sequence:

show sequence

CTTCCCAGGCTACCATGGAGGCTGCAACACATCAAGTAGGCATGGCAGGACCTAGGCCAGTAGT
GCTGAGCGGGCCGTCAGGGGCAGGGAAGAGCACTCTGCTCAAGAAGCTGTTCCAGGAGCACAGC
AGCATCTTCGGCTTCAGCGTGTCTCATACTACAAGGAACCCACGACCTGGTGAAGAAGATGGCA
AAGATTACTACTTTGTGACCAGGGAGATGATGCAGCGTGATATTGCAGCAGGGGACTTCATTGA
GCATGCTGAGTTCTCAGGGAACCTGTACGGGACAAGCAAGGAAGCTGTTCGGGCTGTGCAGGCC
ATGAACCGCATCTGCGTGCTAGATGTCGACCTACAAGGTGTGCGCAGCATCAAGAAGACTGATC
TGTGTCCCATCTACATCTTTGTGCAGCCTCCCTCGCTGGACGTGCTGGAGCAACGACTGCGACT
GCGCAACACTGAGACTGAGGAGAGTCTGGCAAAGCGGCTGGCAGCTGCACGGACAGACATGGAG
AGCAGCAAGGAGCCTGGCTTGTTTGACCTGGTGATCATCAATGACGACCTGGATAAAGCCTATG
CAACCCTGAAGCAGGCGCTCTCTGAGGAAATCAAGAAAGCACAGGGAACTGGCCACGCCTGAAG
GCCTGCTTCATTCCACAGAGTGATGTCTGTGGTCTAAATTTGCCTGGAGGTGGGGGAAACTTTG
CCAGGGCACCAAGGACTTGTAGTAGACTTCCACTGTGGAGTAGAAGGAGCTACCCTTTGTCTGA
CCACAAGGTGGCTCTGCACCGTGGGCTGACTCACTGGCTGAATGACTCCAAAGAGTACCCATAT
CTAATCTCCCTGGACTATTTGTGTTCCTTTCCTTGTTCCTTCTGCTGGAGCGGGACTGACCTCT
TAATAAAGTAATTACTGAATTATAGTGTCACAGCCCTCC

hide sequence

RefSeq Acc Id:

NM_008193 ⟹ NP_032219

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	59,074,681 - 59,082,778 (-)	NCBI
GRCm38	11	59,183,855 - 59,191,952 (-)	NCBI
MGSCv37	11	58,997,357 - 59,005,454 (-)	RGD
Celera	11	63,948,962 - 63,956,989 (-)	RGD
cM Map	11		ENTREZGENE

Sequence:

show sequence

GGAGACGTAATGTCAGCGGGCAAAGGTGGGACGTGGCCGGCGCTGGTGCTTTGCGTACTCGGTG
TGCGTAGCCATGCCGCCCTCCGGTGTGTTCCGGTGGGCCGGCGCGCCGCTGTGACGTAGTCCTG
CGGGCGGTCCCTGATGCTGCGGCGCCCGCTGGTCGGGCTGGCGGTGGCCGCCCTGGGTCGGGTC
CCCGCGGACGGCATGGCAGGACCTAGGCCAGTAGTGCTGAGCGGGCCGTCAGGGGCAGGGAAGA
GCACTCTGCTCAAGAAGCTGTTCCAGGAGCACAGCAGCATCTTCGGCTTCAGCGTGTCTCATAC
TACAAGGAACCCACGACCTGGTGAAGAAGATGGCAAAGATTACTACTTTGTGACCAGGGAGATG
ATGCAGCGTGATATTGCAGCAGGGGACTTCATTGAGCATGCTGAGTTCTCAGGGAACCTGTACG
GGACAAGCAAGGAAGCTGTTCGGGCTGTGCAGGCCATGAACCGCATCTGCGTGCTAGATGTCGA
CCTACAAGGTGTGCGCAGCATCAAGAAGACTGATCTGTGTCCCATCTACATCTTTGTGCAGCCT
CCCTCGCTGGACGTGCTGGAGCAACGACTGCGACTGCGCAACACTGAGACTGAGGAGAGTCTGG
CAAAGCGGCTGGCAGCTGCACGGACAGACATGGAGAGCAGCAAGGAGCCTGGCTTGTTTGACCT
GGTGATCATCAATGACGACCTGGATAAAGCCTATGCAACCCTGAAGCAGGCGCTCTCTGAGGAA
ATCAAGAAAGCACAGGGAACTGGCCACGCCTGAAGGCCTGCTTCATTCCACAGAGTGATGTCTG
TGGTCTAAATTTGCCTGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAGTAGACTT
CCACTGTGGAGTAGAAGGAGCTACCCTTTGTCTGACCACAAGGTGGCTCTGCACCGTGGGCTGA
CTCACTGGCTGAATGACTCCAAAGAGTACCCATATCTAATCTCCCTGGACTATTTGTGTTCCTT
TCCTTGTTCCTTCTGCTGGAGCGGGACTGACCTCTTAATAAAGTAATTACTGAATTATAGTGTC
ACAGCCCTCC

hide sequence

RefSeq Acc Id:

XM_006532245 ⟹ XP_006532308

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	59,074,696 - 59,078,583 (-)	NCBI
GRCm38	11	59,183,870 - 59,187,749 (-)	NCBI

Sequence:

show sequence

CATTGACTCTTCCCAGGCTACCATGGAGGCTGCAACACATCAAGCATGGCAGGACCTAGGCCAG
TAGTGCTGAGCGGGCCGTCAGGGGCAGGGAAGAGCACTCTGCTCAAGAAGCTGTTCCAGGAGCA
CAGCAGCATCTTCGGCTTCAGCGTGTCTCATACTACAAGGAACCCACGACCTGGTGAAGAAGAT
GGCAAAGATTACTACTTTGTGACCAGGGAGATGATGCAGCGTGATATTGCAGCAGGGGACTTCA
TTGAGCATGCTGAGTTCTCAGGGAACCTGTACGGGACAAGCAAGGAAGCTGTTCGGGCTGTGCA
GGCCATGAACCGCATCTGCGTGCTAGATGTCGACCTACAAGGTGTGCGCAGCATCAAGAAGACT
GATCTGTGTCCCATCTACATCTTTGTGCAGCCTCCCTCGCTGGACGTGCTGGAGCAACGACTGC
GACTGCGCAACACTGAGACTGAGGAGAGTCTGGCAAAGCGGCTGGCAGCTGCACGGACAGACAT
GGAGAGCAGCAAGGAGCCTGGCTTGTTTGACCTGGTGATCATCAATGACGACCTGGATAAAGCC
TATGCAACCCTGAAGCAGGCGCTCTCTGAGGAAATCAAGAAAGCACAGGGAACTGGCCACGCCT
GAAGGCCTGCTTCATTCCACAGAGTGATGTCTGTGGTCTAAATTTGCCTGGAGGTGGGGGAAAC
TTTGCCAGGGCACCAAGGACTTGTAGTAGACTTCCACTGTGGAGTAGAAGGAGCTACCCTTTGT
CTGACCACAAGGTGGCTCTGCACCGTGGGCTGACTCACTGGCTGAATGACTCCAAAGAGTACCC
ATATCTAATCTCCCTGGACTATTTGTGTTCCTTTCCTTGTTCCTTCTGCTGGAGCGGGACTGAC
CTCTTAATAAAGTAATTACTGAATTATA

hide sequence

RefSeq Acc Id:

XM_006532246 ⟹ XP_006532309

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	59,074,696 - 59,083,033 (-)	NCBI
GRCm38	11	59,183,870 - 59,192,207 (-)	NCBI

Sequence:

show sequence

TGACTTCTGATGTGTTCCTCTCAGGGTCTTTGTAAATTGGCATGGCAGGACCTAGGCCAGTAGT
GCTGAGCGGGCCGTCAGGGGCAGGGAAGAGCACTCTGCTCAAGAAGCTGTTCCAGGAGCACAGC
AGCATCTTCGGCTTCAGCGTGTCTCATACTACAAGGAACCCACGACCTGGTGAAGAAGATGGCA
AAGATTACTACTTTGTGACCAGGGAGATGATGCAGCGTGATATTGCAGCAGGGGACTTCATTGA
GCATGCTGAGTTCTCAGGGAACCTGTACGGGACAAGCAAGGAAGCTGTTCGGGCTGTGCAGGCC
ATGAACCGCATCTGCGTGCTAGATGTCGACCTACAAGGTGTGCGCAGCATCAAGAAGACTGATC
TGTGTCCCATCTACATCTTTGTGCAGCCTCCCTCGCTGGACGTGCTGGAGCAACGACTGCGACT
GCGCAACACTGAGACTGAGGAGAGTCTGGCAAAGCGGCTGGCAGCTGCACGGACAGACATGGAG
AGCAGCAAGGAGCCTGGCTTGTTTGACCTGGTGATCATCAATGACGACCTGGATAAAGCCTATG
CAACCCTGAAGCAGGCGCTCTCTGAGGAAATCAAGAAAGCACAGGGAACTGGCCACGCCTGAAG
GCCTGCTTCATTCCACAGAGTGATGTCTGTGGTCTAAATTTGCCTGGAGGTGGGGGAAACTTTG
CCAGGGCACCAAGGACTTGTAGTAGACTTCCACTGTGGAGTAGAAGGAGCTACCCTTTGTCTGA
CCACAAGGTGGCTCTGCACCGTGGGCTGACTCACTGGCTGAATGACTCCAAAGAGTACCCATAT
CTAATCTCCCTGGACTATTTGTGTTCCTTTCCTTGTTCCTTCTGCTGGAGCGGGACTGACCTCT
TAATAAAGTAATTACTGAATTATA

hide sequence

RefSeq Acc Id:

XM_030245579 ⟹ XP_030101439

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	59,074,696 - 59,082,626 (-)	NCBI
GRCm38	11	59,183,870 - 59,191,801 (-)	NCBI

Sequence:

show sequence

GCCCGCTGGTCGGGCTGGCGGTGGCCGCCCTGGGTCGGGTCCCCGCGGACGGTGAGTGCGCTGG
TGGCTGGTTGTCTTCGGAGTGGGACTTGTGGCAGCATATTTCCCTTGCGTGCCGTCTCCATCTT
GTGGGGATGCCGGGTGAACGTGTTTCTCGGGACCCCAGAACGACAGGGATGGGCACGCGGAGTC
CCAGCCACCAGCAGATCGGTGCAGCATGAGCCTAGTCTGCGCTCTTCCTCTGTTCCCTACCCAG
CCGGCGTCCTGGGCATGGCAGGACCTAGGCCAGTAGTGCTGAGCGGGCCGTCAGGGGCAGGGAA
GAGCACTCTGCTCAAGAAGCTGTTCCAGGAGCACAGCAGCATCTTCGGCTTCAGCGTGTCTCAT
ACTACAAGGAACCCACGACCTGGTGAAGAAGATGGCAAAGATTACTACTTTGTGACCAGGGAGA
TGATGCAGCGTGATATTGCAGCAGGGGACTTCATTGAGCATGCTGAGTTCTCAGGGAACCTGTA
CGGGACAAGCAAGGAAGCTGTTCGGGCTGTGCAGGCCATGAACCGCATCTGCGTGCTAGATGTC
GACCTACAAGGTGTGCGCAGCATCAAGAAGACTGATCTGTGTCCCATCTACATCTTTGTGCAGC
CTCCCTCGCTGGACGTGCTGGAGCAACGACTGCGACTGCGCAACACTGAGACTGAGGAGAGTCT
GGCAAAGCGGCTGGCAGCTGCACGGACAGACATGGAGAGCAGCAAGGAGCCTGGCTTGTTTGAC
CTGGTGATCATCAATGACGACCTGGATAAAGCCTATGCAACCCTGAAGCAGGCGCTCTCTGAGG
AAATCAAGAAAGCACAGGGAACTGGCCACGCCTGAAGGCCTGCTTCATTCCACAGAGTGATGTC
TGTGGTCTAAATTTGCCTGGAGGTGGGGGAAACTTTGCCAGGGCACCAAGGACTTGTAGTAGAC
TTCCACTGTGGAGTAGAAGGAGCTACCCTTTGTCTGACCACAAGGTGGCTCTGCACCGTGGGCT
GACTCACTGGCTGAATGACTCCAAAGAGTACCCATATCTAATCTCCCTGGACTATTTGTGTTCC
TTTCCTTGTTCCTTCTGCTGGAGCGGGACTGACCTCTTAATAAAGTAATTACTGAATTATA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001152882	(Get FASTA)	NCBI Sequence Viewer
	NP_032219	(Get FASTA)	NCBI Sequence Viewer
	XP_006532308	(Get FASTA)	NCBI Sequence Viewer
	XP_006532309	(Get FASTA)	NCBI Sequence Viewer
	XP_030101439	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAC52652	(Get FASTA)	NCBI Sequence Viewer
	AAH24625	(Get FASTA)	NCBI Sequence Viewer
	BAB23219	(Get FASTA)	NCBI Sequence Viewer
	BAB28891	(Get FASTA)	NCBI Sequence Viewer
	EDL07674	(Get FASTA)	NCBI Sequence Viewer
	EDL07675	(Get FASTA)	NCBI Sequence Viewer
	EDL07676	(Get FASTA)	NCBI Sequence Viewer
	Q64520	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	NP_032219 ⟸ NM_008193
- Peptide Label:	isoform 1
- UniProtKB:	Q564G0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLRRPLVGLAVAALGRVPADGMAGPRPVVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNP RPGEEDGKDYYFVTREMMQRDIAAGDFIEHAEFSGNLYGTSKEAVRAVQAMNRICVLDVDLQGV RSIKKTDLCPIYIFVQPPSLDVLEQRLRLRNTETEESLAKRLAAARTDMESSKEPGLFDLVIIN DDLDKAYATLKQALSEEIKKAQGTGHA hide sequence

RefSeq Acc Id:	NP_001152882 ⟸ NM_001159410
- Peptide Label:	isoform 2
- UniProtKB:	E9Q7K1 (UniProtKB/TrEMBL), Q564F2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEAATHQVGMAGPRPVVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYF VTREMMQRDIAAGDFIEHAEFSGNLYGTSKEAVRAVQAMNRICVLDVDLQGVRSIKKTDLCPIY IFVQPPSLDVLEQRLRLRNTETEESLAKRLAAARTDMESSKEPGLFDLVIINDDLDKAYATLKQ ALSEEIKKAQGTGHA hide sequence

RefSeq Acc Id:	XP_006532309 ⟸ XM_006532246
- Peptide Label:	isoform X1
- UniProtKB:	Q64520 (UniProtKB/Swiss-Prot), Q564F2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAGPRPVVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMMQRD IAAGDFIEHAEFSGNLYGTSKEAVRAVQAMNRICVLDVDLQGVRSIKKTDLCPIYIFVQPPSLD VLEQRLRLRNTETEESLAKRLAAARTDMESSKEPGLFDLVIINDDLDKAYATLKQALSEEIKKA QGTGHA hide sequence

RefSeq Acc Id:	XP_006532308 ⟸ XM_006532245
- Peptide Label:	isoform X1
- UniProtKB:	Q64520 (UniProtKB/Swiss-Prot), Q564F2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAGPRPVVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMMQRD IAAGDFIEHAEFSGNLYGTSKEAVRAVQAMNRICVLDVDLQGVRSIKKTDLCPIYIFVQPPSLD VLEQRLRLRNTETEESLAKRLAAARTDMESSKEPGLFDLVIINDDLDKAYATLKQALSEEIKKA QGTGHA hide sequence

RefSeq Acc Id:	XP_030101439 ⟸ XM_030245579
- Peptide Label:	isoform X1

RefSeq Acc Id:

ENSMUSP00000127566 ⟸ ENSMUST00000170202

RefSeq Acc Id:

ENSMUSP00000134236 ⟸ ENSMUST00000172714

RefSeq Acc Id:

ENSMUSP00000130214 ⟸ ENSMUST00000170895

Protein Domains

Guanylate kinase-like GuKc

Promoters

RGD ID:

6821037

Promoter ID:

MM_KWN:7625

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day3, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen

Transcripts:

NM_008193, OTTMUST00000012801

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	11	59,005,156 - 59,005,656 (-)	MPROMDB

RGD ID:

8674794

Promoter ID:

EPDNEW_M15428

Type:

multiple initiation site

Name:

Guk1_2

Description:

Mus musculus guanylate kinase 1 , transcript variant 1, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M15429

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	11	59,187,762 - 59,187,822	EPDNEW

RGD ID:

8674796

Promoter ID:

EPDNEW_M15429

Type:

initiation region

Name:

Guk1_1

Description:

Mus musculus guanylate kinase 1 , transcript variant 1, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M15428

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	11	59,191,812 - 59,191,872	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:95871	AgrOrtholog
Ensembl Genes	ENSMUSG00000020444	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein	ENSMUSP00000127566	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUSP00000130214	ENTREZGENE, UniProtKB/TrEMBL
	ENSMUSP00000134236	UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000170202	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUST00000170895	ENTREZGENE, UniProtKB/TrEMBL
	ENSMUST00000172714	UniProtKB/TrEMBL
InterPro	GK/Ca_channel_bsu	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Guanylate_kin-like_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Guanylate_kinase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Guanylate_kinase_CS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:14923	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD	MGI:95871	ENTREZGENE
NCBI Gene	14923	ENTREZGENE
Pfam	Guanylate_kin	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Guk1	PhenoGen
PROSITE	GUANYLATE_KINASE_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	GUANYLATE_KINASE_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	GuKc	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGRFAMs	guanyl_kin	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	E9Q7K1	ENTREZGENE, UniProtKB/TrEMBL
	G3UYV3_MOUSE	UniProtKB/TrEMBL
	KGUA_MOUSE	UniProtKB/Swiss-Prot
	Q564F2	ENTREZGENE
	Q564G0	ENTREZGENE
	Q64520	ENTREZGENE
UniProt Secondary	Q564F2	UniProtKB/Swiss-Prot
	Q564G0	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Annotations - SMPDB

Imported Annotations - KEGG (archival)