Dtymk (deoxythymidylate kinase) - Rat Genome Database

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Gene: Dtymk (deoxythymidylate kinase) Mus musculus
Analyze
Symbol: Dtymk
Name: deoxythymidylate kinase
RGD ID: 1320048
MGI Page MGI
Description: Enables thymidylate kinase activity. Acts upstream of or within cellular response to growth factor stimulus and dTDP biosynthetic process. Predicted to be located in mitochondrial matrix. Predicted to be active in mitochondrion and nucleus. Is expressed in several structures, including alimentary system; forebrain; genitourinary system; midbrain; and respiratory system. Orthologous to human DTYMK (deoxythymidylate kinase).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AU044245; CDC8; D10Ertd203; D10Ertd203e; dTMP kinase; mtmk; thymidylate kinase; Tmk; TMPK; TYP; TYPK
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39193,720,298 - 93,730,246 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl193,720,298 - 93,729,656 (-)EnsemblGRCm39 Ensembl
GRCm38193,792,576 - 93,802,068 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl193,792,576 - 93,801,934 (-)EnsemblGRCm38mm10GRCm38
MGSCv37195,689,153 - 95,698,511 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36195,630,901 - 95,632,281 (-)NCBIMGSCv36mm8
Celera196,736,573 - 96,746,015 (-)NCBICelera
Cytogenetic Map1DNCBI
cM Map147.34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
(1->4)-beta-D-glucan  (EXP)
(S)-nicotine  (ISO)
1,2-dimethylhydrazine  (EXP)
1-chloro-2,4-dinitrobenzene  (EXP)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
4,4'-diaminodiphenylmethane  (EXP)
4-(ethoxymethylene)-2-phenyloxazol-5-one  (EXP)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (ISO)
actinomycin D  (ISO)
ADP  (ISO)
aflatoxin B1  (EXP)
all-trans-retinoic acid  (ISO)
amitrole  (ISO)
antirheumatic drug  (ISO)
arsenite(3-)  (EXP,ISO)
arsenous acid  (EXP)
benzo[a]pyrene  (EXP,ISO)
bisphenol A  (ISO)
bisphenol AF  (ISO)
Bisphenol B  (ISO)
bucladesine  (ISO)
buspirone  (ISO)
cadmium atom  (ISO)
calcitriol  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
chlorpyrifos  (EXP)
chromium(6+)  (ISO)
ciguatoxin CTX1B  (EXP)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
DDE  (ISO)
diarsenic trioxide  (EXP)
diazinon  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (EXP)
diclofenac  (ISO)
dieldrin  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
finasteride  (ISO)
folic acid  (EXP)
furan  (ISO)
genistein  (ISO)
gentamycin  (ISO)
geraniol  (ISO)
ivermectin  (ISO)
leflunomide  (ISO)
levofloxacin  (ISO)
medroxyprogesterone acetate  (ISO)
methimazole  (ISO)
methylseleninic acid  (ISO)
N-nitrosodiethylamine  (EXP)
nickel dichloride  (ISO)
nickel subsulfide  (ISO)
nicotine  (ISO)
Nutlin-3  (ISO)
ozone  (EXP)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
phenobarbital  (ISO)
pirinixic acid  (EXP)
piroxicam  (ISO)
propiconazole  (ISO)
resveratrol  (EXP)
SB 431542  (ISO)
sodium arsenite  (ISO)
sulfadimethoxine  (ISO)
sunitinib  (ISO)
testosterone  (ISO)
tetrachloromethane  (EXP)
thiram  (ISO)
titanium dioxide  (EXP)
tolcapone  (ISO)
toluene 2,4-diisocyanate  (EXP)
trichloroethene  (ISO)
trimellitic anhydride  (EXP)
troglitazone  (EXP,ISO)
trovafloxacin  (ISO)
tungsten  (EXP)
uranium atom  (ISO)
urethane  (ISO)
valproic acid  (ISO)
zidovudine  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Activities of some enzymes of pyrimidine and DNA synthesis in a rat transplantable hepatoma and human primary hepatomas, in cell lines derived from these tissues, and in human fetal liver. Cummins RR and Balinsky D, Cancer Res. 1980 Apr;40(4):1235-9.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8845311   PMID:8889548   PMID:10349636   PMID:10464095   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12904583   PMID:14610273   PMID:14681479   PMID:15782199  
PMID:16141072   PMID:16141073   PMID:16602821   PMID:18799693   PMID:21267068   PMID:21873635   PMID:24457600   PMID:28190767   PMID:30389914   PMID:32554809   PMID:34321999   PMID:38621447  


Genomics

Comparative Map Data
Dtymk
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39193,720,298 - 93,730,246 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl193,720,298 - 93,729,656 (-)EnsemblGRCm39 Ensembl
GRCm38193,792,576 - 93,802,068 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl193,792,576 - 93,801,934 (-)EnsemblGRCm38mm10GRCm38
MGSCv37195,689,153 - 95,698,511 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36195,630,901 - 95,632,281 (-)NCBIMGSCv36mm8
Celera196,736,573 - 96,746,015 (-)NCBICelera
Cytogenetic Map1DNCBI
cM Map147.34NCBI
DTYMK
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382241,675,747 - 241,686,815 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2241,675,747 - 241,686,944 (-)EnsemblGRCh38hg38GRCh38
GRCh372242,615,162 - 242,626,230 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362242,263,830 - 242,274,900 (-)NCBINCBI36Build 36hg18NCBI36
Celera2236,286,957 - 236,298,151 (-)NCBICelera
Cytogenetic Map2q37.3NCBI
HuRef2234,370,538 - 234,381,765 (-)NCBIHuRef
CHM1_12242,621,221 - 242,632,448 (-)NCBICHM1_1
T2T-CHM13v2.02242,179,081 - 242,190,147 (-)NCBIT2T-CHM13v2.0
Dtymk
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr89101,762,899 - 101,771,733 (-)NCBIGRCr8
mRatBN7.2994,315,552 - 94,324,386 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl994,315,552 - 94,324,870 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx9102,751,029 - 102,759,863 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.09107,886,508 - 107,895,248 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.09106,242,614 - 106,251,356 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.09100,921,565 - 100,930,399 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl9100,921,565 - 100,930,399 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.09100,574,720 - 100,583,554 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4993,065,333 - 93,074,168 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1993,270,105 - 93,281,003 (-)NCBI
Celera991,849,852 - 91,858,636 (-)NCBICelera
Cytogenetic Map9q36NCBI
Dtymk
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955542155,742 - 163,759 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955542155,741 - 163,759 (+)NCBIChiLan1.0ChiLan1.0
DTYMK
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213144,384,093 - 144,395,584 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B144,398,989 - 144,410,620 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B128,952,009 - 128,963,640 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B247,740,881 - 247,752,507 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B247,740,881 - 247,752,504 (-)Ensemblpanpan1.1panPan2
DTYMK
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12551,520,307 - 51,535,407 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2551,520,581 - 51,526,069 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2551,520,581 - 51,526,069 (-)NCBICanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2551,738,743 - 51,749,088 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02551,718,398 - 51,728,728 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.12551,568,255 - 51,578,566 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02551,307,418 - 51,317,739 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02551,584,115 - 51,594,478 (-)NCBIUU_Cfam_GSD_1.0
Dtymk
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303192,930,085 - 192,936,371 (-)NCBIHiC_Itri_2
SpeTri2.0NW_004936745282,199 - 289,273 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DTYMK
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15140,248,079 - 140,255,805 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115140,248,071 - 140,255,803 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
DTYMK
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110127,722,091 - 127,733,662 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl10127,721,784 - 127,733,476 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604071,588,595 - 71,600,206 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dtymk
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248475,630,619 - 5,638,000 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248475,630,765 - 5,637,948 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Dtymk
544 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:554
Count of miRNA genes:372
Interacting mature miRNAs:418
Transcripts:ENSMUST00000027503, ENSMUST00000112890, ENSMUST00000112893, ENSMUST00000144106
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
15039333Nmrs1_mNAFLD-associated magnetic resonance shift 1 (mouse)189786512123786512Mouse
10045976Tir6_mtrypanosome infection response 6 (mouse)Not determined193536855120529678Mouse
1357847Jckm2_mjuvenile cystic kidney modifier 2 (mouse)Not determined174991977133290937Mouse
4141627Bwq7_mbody weight, QTL 7 (mouse)Not determined192940909124497796Mouse
4142394Mssq1_mmandible size and shape QTL 1 (mouse)Not determined73615692107615830Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
1558928Mord2_mmodifier of retinal degeneration 2 (mouse)Not determined177123115110536075Mouse
12879491Hfnq1_mhair follicle number QTL 1 (mouse)193310310123636759Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145783900189303617Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
14697706Stsl3a_mSalmonella typhimurium susceptibility locus 3a (mouse)17747663795827725Mouse
12790991Aath1_maortic arch atherosclerosis 1 (mouse)186483929120483929Mouse
1357721Sle17_msystematic lupus erythematosus susceptibility 17 (mouse)Not determined139132808126445310Mouse
10412238Alpq5_malcohol preference QTL 5 (mouse)Not determined182832635116832635Mouse
1302146Cocrb1_mcocaine related behavior 1 (mouse)Not determined170133533104139557Mouse
1357760Synch3_msynechia 3 (mouse)Not determined192901442126901550Mouse
1558860W10q7_mweight 10 weeks QTL 7 (mouse)Not determined134760138150193871Mouse
4141347Reb1_mrepetitive behavior 1 (mouse)Not determined91468266100413667Mouse
12791004Aath7_maortic arch atherosclerosis 7 (mouse)182832635116832635Mouse
4141725Wbcq4_mwhite blood cell quantitative locus 4 (mouse)Not determined179858683113858791Mouse
12050069Nabq1_mnasal bone morphology QTL 1 (mouse)179858683113858791Mouse
1300976Bmd19_mbone mineral density 19 (mouse)Not determined173266214108838414Mouse
1357488Splq3_mspleen weight QTL 3 (mouse)Not determined134760138150193871Mouse
4141914Gcsfis_mG-CSF induced splenomegaly (mouse)Not determined74516235148715579Mouse
27095928Pglq6_mpelvic girdle length QTL 6, 10 week (mouse)175976637148775742Mouse
27095931Pglq1_mpelvic girdle length QTL 1, 5 week (mouse)175976637128527737Mouse
13452395Leusq2_mleucocytosis susceptibility QTL 2 (mouse)180245593126386517Mouse
1301748Abbp1_mA/J and C57BL/6 blood pressure 1 (mouse)Not determined162946755120529678Mouse
1301304Hrq3_mheart rate quantitative locus 3 (mouse)Not determined173615692107615830Mouse
1357439Popoa_mpremature ovulation and primary oocyte arrest (mouse)Not determined182643189135615379Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52457737182250592Mouse
1357753Kidq2_mkidney weight QTL 2 (mouse)Not determined134760138150193871Mouse
1300989Lrdg1_mlight induced retinal degeneration 1 (mouse)Not determined173755175147125370Mouse
4141329Mleu1_mmyeloid leukemia survival 1 (mouse)Not determined89786512123786512Mouse
11667074Led2_mlate embryonic death 2 (mouse)185696027117195081Mouse
27095918Ulnl1_mulna length 1, 5 week (mouse)167339159129727737Mouse
1301350Nidd4k_mNidd4 on KK-A (mouse)Not determined782291982147125370Mouse
1300841Ssial1_msusceptibility to sialadenitis 1 (mouse)Not determined163920002153557562Mouse
26884448Sklq1_mskull length QTL 1, 5 week (mouse)175976637181327565Mouse

Markers in Region
AU044245  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38193,800,529 - 93,800,764UniSTSGRCm38
MGSCv37195,697,106 - 95,697,341UniSTSGRCm37
Celera196,744,609 - 96,744,844UniSTS
Cytogenetic Map1DUniSTS
cM Map138.0UniSTS
Whitehead/MRC_RH11320.03UniSTS
RH126426  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38193,792,676 - 93,792,922UniSTSGRCm38
MGSCv37195,689,253 - 95,689,499UniSTSGRCm37
Celera196,736,673 - 96,736,919UniSTS
Cytogenetic Map1DUniSTS
cM Map1038.0UniSTS
cM Map138.0UniSTS
cM Map147.34UniSTS
cM Map1 UniSTS
cM Map10 UniSTS
Whitehead/MRC_RH11323.1UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001105667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_023136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003954565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA014471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC162891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI462533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK011955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK080078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205785 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC030178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC069902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY098372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  C78743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB182101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF983443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S82852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S82853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000027503   ⟹   ENSMUSP00000027503
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl193,720,298 - 93,729,656 (-)Ensembl
GRCm38.p6 Ensembl193,792,576 - 93,801,934 (-)Ensembl
Ensembl Acc Id: ENSMUST00000112890   ⟹   ENSMUSP00000108511
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl193,727,787 - 93,729,628 (-)Ensembl
GRCm38.p6 Ensembl193,800,065 - 93,801,906 (-)Ensembl
Ensembl Acc Id: ENSMUST00000112893   ⟹   ENSMUSP00000108514
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl193,720,446 - 93,726,723 (-)Ensembl
GRCm38.p6 Ensembl193,792,724 - 93,799,001 (-)Ensembl
Ensembl Acc Id: ENSMUST00000144106
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl193,726,102 - 93,727,083 (-)Ensembl
GRCm38.p6 Ensembl193,798,380 - 93,799,361 (-)Ensembl
RefSeq Acc Id: NM_001105667   ⟹   NP_001099137
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39193,720,298 - 93,729,656 (-)NCBI
GRCm38193,792,576 - 93,801,934 (-)ENTREZGENE
MGSCv37195,689,153 - 95,698,511 (-)RGD
Celera196,736,573 - 96,746,015 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_023136   ⟹   NP_075625
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39193,728,217 - 93,729,656 (-)NCBI
GRCm38193,800,495 - 93,801,934 (-)NCBI
MGSCv37195,689,153 - 95,698,511 (-)RGD
Celera196,736,573 - 96,746,015 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: XR_003954565
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39193,720,305 - 93,730,246 (-)NCBI
GRCm38193,792,583 - 93,802,068 (-)NCBI
Sequence:
RefSeq Acc Id: NP_075625   ⟸   NM_023136
- Peptide Label: isoform 2
- UniProtKB: Q6GRA7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001099137   ⟸   NM_001105667
- Peptide Label: isoform 1
- UniProtKB: Q8C2L0 (UniProtKB/Swiss-Prot),   Q8K2S2 (UniProtKB/Swiss-Prot),   P97930 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000027503   ⟸   ENSMUST00000027503
Ensembl Acc Id: ENSMUSP00000108514   ⟸   ENSMUST00000112893
Ensembl Acc Id: ENSMUSP00000108511   ⟸   ENSMUST00000112890
Protein Domains
Thymidylate kinase-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P97930-F1-model_v2 AlphaFold P97930 1-212 view protein structure

Promoters
RGD ID:6874572
Promoter ID:EPDNEW_M737
Type:single initiation site
Name:Dtymk_2
Description:Mus musculus deoxythymidylate kinase , transcript variant 2,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M738  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38193,799,363 - 93,799,423EPDNEW
RGD ID:6874574
Promoter ID:EPDNEW_M738
Type:initiation region
Name:Dtymk_1
Description:Mus musculus deoxythymidylate kinase , transcript variant 2,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M737  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38193,801,897 - 93,801,957EPDNEW
RGD ID:6817622
Promoter ID:MM_KWN:1706
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   ES_Cell,   Lung,   MEF_B6
Transcripts:ENSMUST00000112893,   UC007CEL.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36195,695,301 - 95,696,572 (-)MPROMDB
RGD ID:6817623
Promoter ID:MM_KWN:1707
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000112890,   NM_001105667,   OTTMUST00000078168
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36195,698,331 - 95,698,831 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:108396 AgrOrtholog
Ensembl Genes ENSMUSG00000026281 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000027503 ENTREZGENE
  ENSMUST00000027503.14 UniProtKB/Swiss-Prot
  ENSMUST00000112890 ENTREZGENE
  ENSMUST00000112890.3 UniProtKB/Swiss-Prot
  ENSMUST00000112893.2 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Thymidylate_kin-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Thymidylate_kin_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Thymidylate_kinase UniProtKB/Swiss-Prot
KEGG Report mmu:21915 UniProtKB/Swiss-Prot
MGD MGI:108396 ENTREZGENE
NCBI Gene 21915 ENTREZGENE
PANTHER THYMIDYLATE KINASE UniProtKB/Swiss-Prot
  THYMIDYLATE KINASE UniProtKB/Swiss-Prot
  THYMIDYLATE KINASE UniProtKB/TrEMBL
  THYMIDYLATE KINASE UniProtKB/TrEMBL
Pfam Thymidylate_kin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Dtymk PhenoGen
PROSITE THYMIDYLATE_KINASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt D3Z3R3_MOUSE UniProtKB/TrEMBL
  KTHY_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q6GRA7 ENTREZGENE, UniProtKB/TrEMBL
  Q8C2L0 ENTREZGENE
  Q8K2S2 ENTREZGENE
UniProt Secondary Q8C2L0 UniProtKB/Swiss-Prot
  Q8K2S2 UniProtKB/Swiss-Prot