Advanced Search (OLGA)

Gene: Wbp2nl (WBP2 N-terminal like) Mus musculus

Analyze

Symbol:

Wbp2nl

Name:

WBP2 N-terminal like

RGD ID:

1319631

MGI Page

MGI

Description:

Predicted to enable WW domain binding activity; chromatin DNA binding activity; and transcription coactivator activity. Predicted to be involved in egg activation; male pronucleus assembly; and positive regulation of DNA-templated transcription. Predicted to act upstream of or within female pronucleus assembly. Predicted to be located in perinuclear theca; sperm flagellum; and sperm head. Predicted to be active in nucleus. Orthologous to human WBP2NL (WBP2 N-terminal like).

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

4930521I23Rik; P; PAWP; postacrosomal sheath WW domain-binding protein; WW domain-binding protein 2-like

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	WBP2NL (WBP2 N-terminal like)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Wbp2nl (WBP2 N-terminal like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Wbp2nl (WBP2 N-terminal like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	WBP2NL (WBP2 N-terminal like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	WBP2NL (WBP2 N-terminal like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	LOC101960563 (uncharacterized LOC101960563)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	WBP2NL (WBP2 N-terminal like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Wbp2nl (WBP2 N-terminal like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Wbp2nl (WBP2 N-terminal like)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	WBP2NL (WBP2 N-terminal like)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	wbp2nl (WBP2 N-terminal like)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|ZFIN)
Caenorhabditis elegans (roundworm):	C18B2.4	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER)
Drosophila melanogaster (fruit fly):	Wbp2	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER)
Caenorhabditis elegans (roundworm):	D2013.6	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	wbp2nl	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	82,183,126 - 82,198,848 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	82,183,155 - 82,198,824 (+)	Ensembl		GRCm39 Ensembl
GRCm38	15	82,298,925 - 82,314,647 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	82,298,954 - 82,314,623 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	82,129,414 - 82,144,988 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	82,126,719 - 82,142,107 (+)	NCBI		MGSCv36	mm8
Celera	15	84,423,079 - 84,438,650 (+)	NCBI		Celera
Cytogenetic Map	15	E1	NCBI
cM Map	15	38.56	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

adenylosuccinase lyase deficiency (ISO)

common variable immunodeficiency 4 (ISO)

intellectual disability (ISO)

Kanzaki disease (ISO)

Schindler disease type 1 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

aflatoxin B1 (ISO)

all-trans-retinoic acid (EXP)

bis(2-ethylhexyl) phthalate (EXP)

bisphenol A (ISO)

CGP 52608 (ISO)

hydralazine (ISO)

malathion (ISO)

mono(2-ethylhexyl) phthalate (EXP)

paracetamol (ISO)

permethrin (ISO)

triphenyl phosphate (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

egg activation (ISS)

female pronucleus assembly (ISO)

male pronucleus assembly (ISS)

positive regulation of DNA-templated transcription (IBA,IEA)

regulation of cytosolic calcium ion concentration (ISO)

Cellular Component

nucleus (IBA)

perinuclear theca (ISS)

sperm flagellum (IEA,ISO)

sperm head (IEA,ISO)

Molecular Function

chromatin DNA binding (IBA)

protein binding (ISO)

transcription coactivator activity (IBA,IEA)

WW domain binding (ISS)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:10349636	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851	PMID:12477932	PMID:16141072	PMID:16141073	PMID:17289678	PMID:17988661	PMID:21677750	PMID:21873635
PMID:24381051	PMID:24970390	PMID:25057041	PMID:26377222	PMID:38355793

Genomics

Comparative Map Data

Wbp2nl
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	82,183,126 - 82,198,848 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	82,183,155 - 82,198,824 (+)	Ensembl		GRCm39 Ensembl
GRCm38	15	82,298,925 - 82,314,647 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	82,298,954 - 82,314,623 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	82,129,414 - 82,144,988 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	82,126,719 - 82,142,107 (+)	NCBI		MGSCv36	mm8
Celera	15	84,423,079 - 84,438,650 (+)	NCBI		Celera
Cytogenetic Map	15	E1	NCBI
cM Map	15	38.56	NCBI

WBP2NL
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	22	41,998,788 - 42,058,371 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	22	41,998,725 - 42,058,456 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	22	42,394,792 - 42,424,479 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	22	40,724,738 - 40,754,425 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	22	26,200,953 - 26,230,676 (+)	NCBI		Celera
Cytogenetic Map	22	q13.2	NCBI
HuRef	22	25,360,930 - 25,390,655 (+)	NCBI		HuRef
CHM1_1	22	42,354,919 - 42,384,632 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	22	42,478,395 - 42,537,955 (+)	NCBI		T2T-CHM13v2.0

Wbp2nl
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	115,694,910 - 115,710,912 (+)	NCBI		GRCr8
mRatBN7.2	7	113,814,793 - 113,831,974 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	113,814,992 - 113,831,333 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	7	123,531,657 - 123,548,574 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	123,531,682 - 123,548,081 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	123,516,366 - 123,533,289 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	120,674,629 - 120,689,938 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	7	110,129,903 - 110,146,820 (+)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI

Wbp2nl
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955413	27,402,545 - 27,436,906 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955413	27,402,614 - 27,442,106 (+)	NCBI	ChiLan1.0	ChiLan1.0

WBP2NL
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	23	51,828,365 - 51,863,810 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	22	54,527,569 - 54,561,839 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	22	22,891,166 - 22,926,920 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	22	40,974,715 - 41,008,296 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	22	40,974,715 - 41,004,007 (+)	Ensembl	panpan1.1		panPan2

WBP2NL
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	23,333,420 - 23,368,234 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	23,344,094 - 23,368,153 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	23,267,499 - 23,302,315 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	24,077,925 - 24,112,940 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	24,088,813 - 24,112,859 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	23,795,297 - 23,830,271 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	24,116,424 - 24,151,255 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	24,290,357 - 24,325,371 (-)	NCBI		UU_Cfam_GSD_1.0

LOC101960563
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	6,999,791 - 7,000,591 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936492	10,208 - 13,477 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

WBP2NL
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	19	24,533,727 - 24,573,482 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	19	24,554,895 - 24,567,023 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	100,834,032 - 100,875,955 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Wbp2nl
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624752	6,711,843 - 6,736,018 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624752	6,689,501 - 6,736,053 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Wbp2nl
553 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	86
Count of miRNA genes:	80
Interacting mature miRNAs:	86
Transcripts:	ENSMUST00000023089
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
26884442	Sklq6_m	skull length QTL 6, 5 week (mouse)					15	6129481	100797881	Mouse
38501067	Tip3_m	tuberculosis immunophenotype 3, IFN-g level (mouse)					15	53563396	89584203	Mouse
1300627	Sluc26_m	susceptibility to lung cancer 26 (mouse)			Not determined		15	70345653	104073951	Mouse
1357526	Hyplip2_m	hyperlipidemia 2 (mouse)			Not determined		15	12402203	102896555	Mouse
27226777	Tibl8_m	tibia length 8, 5 week (mouse)					15	6929481	84584201	Mouse
4142198	Hbtq_m	habituation QTL (mouse)			Not determined		15	51160708	85160833	Mouse
15092079	Igly6_m	IgG glycosylation 6, GP6 (mouse)					15	74100540	82674156	Mouse
1357407	Pfat4_m	predicted fat percentage 4 (mouse)	8.6		Body fat amount	predicted fat percentage	15	57117005	91117153	Mouse
14928306	Manh79_m	mandible shape 79 (mouse)					15	78847557	104073951	Mouse
1357894	Epfpq3_m	epididymal fat percentage QTL 3 (mouse)			Not determined		15	78601103	102901704	Mouse
26884425	Cvht2_m	cranial vault height 2, 5 week (mouse)					15	28800146	102008435	Mouse
1302080	Szs13_m	seizure susceptibility 13 (mouse)			Not determined		15	51685832	85694449	Mouse
1300800	Ses3_m	salmonella enteritidis susceptibility 3 (mouse)			Not determined		15	57117005	91117153	Mouse
4142060	W3q6_m	weight 3 weeks QTL 6 (mouse)			Not determined			78601103	102901704	Mouse
13504731	Cath5_m	carotid atherosclerosis 5 (mouse)					15	54789129	88789129	Mouse
15092080	Igly7_m	IgG glycosylation 7, GP10 (mouse)					15	77794919	82674156	Mouse
12791003	Aath8_m	aortic arch atherosclerosis 8 (mouse)					15	73430144	104073951	Mouse
10045637	Heal27_m	wound healing/regeneration 29 (mouse)			Not determined		15	51418361	85418511	Mouse
27095936	Ulnl4_m	ulna length 4, 5 week (mouse)					15	56763396	87684201	Mouse
1558985	Eae32_m	experimental allergic encephalomyelitis susceptibility 32 (mouse)			Not determined		15	32578416	103425899	Mouse
4141921	Pstc3_m	periosteal circumference 3 (mouse)			Not determined		15	67270698	101270847	Mouse
1301708	Cocrb14_m	cocaine related behavior 14 (mouse)			Not determined		15	51806515	85806651	Mouse
12880411	V125Dq11_m	vitamin D active form serum level QTL 11 (mouse)					15	78897881	104073951	Mouse
12880420	V25Dq8_m	vitamin D inactive form serum level QTL 8 (mouse)					15	61584200	95584200	Mouse
1301171	Brm2_m	brachyury modifier 2 (mouse)			Not determined		15	65525376	99525499	Mouse
1300851	Heal4_m	wound healing/regeneration 4 (mouse)			Not determined		15	77527592	104073951	Mouse
14747011	Mancz13_m	mandible centroid size 13 (mouse)					15	72382669	104073951	Mouse
10402490	Dipa5_m	drug induced psychomotor activation 5 (mouse)			Not determined		15	79163411	104073951	Mouse
1300726	Pitm4_m	prion incubation time 4 (mouse)			Not determined		15	70349271	104073951	Mouse
1301429	Pcir3_m	periosteal circumference 3 (mouse)			Not determined		15	48465362	82465496	Mouse
1302197	Bhr2_m	bronchial hyperresponsiveness 2 (mouse)			Not determined		15	64306334	103425899	Mouse
26884402	Cvht9_m	cranial vault height 9, 16 week (mouse)					15	42163396	95497881	Mouse
1302074	Bmd4_m	bone mineral density 4 (mouse)			Not determined		15	56186708	103425899	Mouse
1301119	Drb7_m	dopamine receptor binding 7 (mouse)			Not determined		15	65336578	99341028	Mouse
4141135	Cia35_m	collagen induced arthritis 35 (mouse)			Not determined		15	64811826	98811946	Mouse
27226734	Tibmd5_m	tibia midshaft diameter 5, 10 week (mouse)					15	6129481	86684201	Mouse
4141902	Cia37_m	collagen induced arthritis 37 (mouse)			Not determined		15	80884933	104073951	Mouse
1301601	Faq9_m	fluctuating asymmetry QTL 9 (mouse)			Not determined		15	63163903	97163995	Mouse
1301472	Pain1_m	pain 1 (mouse)			Not determined		15	75320846	90813185	Mouse
26884399	Humsd1_m	humerus midshaft diameter 1, 5 week (mouse)					15	48363396	101708435	Mouse
27226729	Tibmd2_m	tibia midshaft diameter 2, 5 week (mouse)					15	38000244	86684201	Mouse
4141897	Imrfq2_m	immune response to Factor IX QTL 2 (mouse)			Not determined			79908940	104073951	Mouse
26884397	Humsd5_m	humerus midshaft diameter 5, 10 week (mouse)					15	48363396	98397881	Mouse
1301284	Cosz3_m	cocaine seizure 3 (mouse)			Not determined		15	80313634	104073951	Mouse
1300648	Dbsty4_m	diabesity 4 (mouse)			Not determined		15	70349271	104073951	Mouse
10412067	Pain2_m	pain 2 (mouse)			Not determined		15	51645339	85645626	Mouse
1300974	Pgia9_m	proteoglycan induced arthritis 9 (mouse)			Not determined		15	80884933	104073951	Mouse

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_029066	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017316772	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC104325	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK015863	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC119520	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466550	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000023089 ⟹ ENSMUSP00000023089

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	15	82,183,155 - 82,198,824 (+)	Ensembl
GRCm38.p6 Ensembl	15	82,298,954 - 82,314,623 (+)	Ensembl

RefSeq Acc Id:

NM_029066 ⟹ NP_083342

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	15	82,183,185 - 82,198,759 (+)	NCBI
GRCm38	15	82,298,984 - 82,314,558 (+)	NCBI
MGSCv37	15	82,129,414 - 82,144,988 (+)	RGD
Celera	15	84,423,079 - 84,438,650 (+)	RGD
cM Map	15		ENTREZGENE

Sequence:

show sequence

GGCGGGAGGAGACCTAGAGCAAGATGGCAGTGAACCAGAACCATACAGTGGACCGCCGTTGGGC
CGCCATCCCTCATGGTGAAAGTCTCTTGAAGAAATGTTCAGAAGTGGACCTCTCCTTCCCCCAG
TCACCGCCAGGCTCCAACCTCTTTAGTGGTACAAAGAGGGGGGCTCTGTTTCTCACCTCATACC
GGGTGATTTTTGTGACTTCGCGTGCAGACAACGATCCCATGTTTTCTTTTACGATGCCATTTCA
TCTAATGAATAACTGCACTGTTGAACAACCAATCTTTGGTGCAAACTACATTAAAGGGACAATT
CAGGCAGCTCCAGACGGTGGCTGGGAAGGTTCTGCTACTTTTAAAATAGTCTTCCGGAAAGGAG
GTGCTATCGACTTTGCCCAGTTGATGGCCAAAGCTGCCTCTGCGGCTGCCCAAGGAGTTCCACT
ACGAGTTGCAAGCTTCTGGATGGGCCCTCTAGGAATTTATGTCATCACTGGGGACAGGAACATG
TATGCCCCACAGGCATACCAAGTTGCCTATGGAGCCCCACCTGCGGGATATGGGGCCTCACCCG
TGGGATACGGAGTCCCATCTGCAGGGTATGGAGCCCCACCTGCGGGGTACGGAGCCCCGCCAGT
GGGTTATGTAGCCCCATCTCCCGGATACGATGTCCTGCCTCCTGGATACGGAGCTGTGAGATAT
GGCTCCCCTCCTCCTCTATATGTAGCTACCCCAATGGGCTATGGAGTTCCACCTCCTGGATATG
GACCTCCACCTGTGAGATACGGATCCCCACCTCCTGGATATGAAGCCCCCACTATGGAGTATGG
AGCCCAACCTCCCAGATACGGAACTACACCTATGGGATCCGGTTCCCCACCTCCCAGATATGAA
GCCCCGCCTATGGGGTATGGAACTCCTCCTTCAGGGCGTGAGTCCATACCTCCTGGATCAAGGG
CCACGTCTGTAGCACAGGAAGCTCCACCTGCTGGGTCTGAAGCAGGCCATCCCATGTCTGTGGC
AGTCCAGAATCCTGAATTCCAGGCATCTTTTCCCTCTACCTCGTCCTCACAAGTCCACTCTCCC
CGCTCTAAGATGTAAACCTTGAAGTTTCACCAAGCAAAACAGCACCCTAATGTTGAAGTCAAGA
TAACCCGGAACACTTAGGTATCTGATCACAGACCTGTTCTAGGTAGTTTGTTTCCCTCCTTGGG
AGTTTAGTCACAGGGTGGAACCAAATCTTATCTCCATGTCTTGCTTGTAGAAGCAGTGTGAATT
CTTGGTTAGCTGGATAAAGAAGGGACAGCGTCAGAGGG

hide sequence

RefSeq Acc Id:

XM_017316772 ⟹ XP_017172261

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	15	82,183,126 - 82,198,848 (+)	NCBI
GRCm38	15	82,298,925 - 82,314,647 (+)	NCBI

Sequence:

show sequence

CCACTGCCTTGCAGGCCCCGCCCCTTTCCATTTGAAGAGCTGGCGGCGGCGGAGGCGGCGGCGG
GAGGAGACCTAGAGCAAGATGGCAGTGAACCAGAACCATACAGTGGACCGCCGTTGGGCCGCCA
TCCCTCATGGTGAAAGGTGCCTGAGGGGACTTTCAGGCTGCTGTCAAGGAGGGAGGAGATGCTC
AGGTCTCTTGAAGAAATGTTCAGAAGTGGACCTCTCCTTCCCCCAGTCACCGCCAGGCTCCAAC
CTCTTTAGTGGTACAAAGAGGGGGGCTCTGTTTCTCACCTCATACCGGGTGATTTTTGTGACTT
CGCGTGCAGACAACGATCCCATGTTTTCTTTTACGATGCCATTTCATCTAATGAATAACTGCAC
TGTTGAACAACCAATCTTTGGTGCAAACTACATTAAAGGGACAATTCAGGCAGCTCCAGACGGT
GGCTGGGAAGGTTCTGCTACTTTTAAAATAGTCTTCCGGAAAGGAGGTGCTATCGACTTTGCCC
AGTTGATGGCCAAAGCTGCCTCTGCGGCTGCCCAAGGAGTTCCACTACGAGTTGCAAGCTTCTG
GATGGGCCCTCTAGGAATTTATGTCATCACTGGGGACAGGAACATGTATGCCCCACAGGCATAC
CAAGTTGCCTATGGAGCCCCACCTGCGGGATATGGGGCCTCACCCGTGGGATACGGAGTCCCAT
CTGCAGGGTATGGAGCCCCACCTGCGGGGTACGGAGCCCCGCCAGTGGGTTATGTAGCCCCATC
TCCCGGATACGATGTCCTGCCTCCTGGATACGGAGCTGTGAGATATGGCTCCCCTCCTCCTCTA
TATGTAGCTACCCCAATGGGCTATGGAGTTCCACCTCCTGGATATGGACCTCCACCTGTGAGAT
ACGGATCCCCACCTCCTGGATATGAAGCCCCCACTATGGAGTATGGAGCCCAACCTCCCAGATA
CGGAACTACACCTATGGGATCCGGTTCCCCACCTCCCAGATATGAAGCCCCGCCTATGGGGTAT
GGAACTCCTCCTTCAGGGCGTGAGTCCATACCTCCTGGATCAAGGGCCACGTCTGTAGCACAGG
AAGCTCCACCTGCTGGGTCTGAAGCAGGCCATCCCATGTCTGTGGCAGTCCAGAATCCTGAATT
CCAGGCATCTTTTCCCTCTACCTCGTCCTCACAAGTCCACTCTCCCCGCTCTAAGATGTAAACC
TTGAAGTTTCACCAAGCAAAACAGCACCCTAATGTTGAAGTCAAGATAACCCGGAACACTTAGG
TATCTGATCACAGACCTGTTCTAGGTAGTTTGTTTCCCTCCTTGGGAGTTTAGTCACAGGGTGG
AACCAAATCTTATCTCCATGTCTTGCTTGTAGAAGCAGTGTGAATTCTTGGTTAGCTGGATAAA
GAAGGGACAGCGTCAGAGGGTTAAATCCCCTAATGTCTTGCTTGACATAGGATGCATTTTAAAG
CATACCTTGCTGTGAGTTTGCAAAAAGCCTCCTGCCTTATTCTCA

hide sequence

Protein Sequences


Protein RefSeqs	NP_083342	(Get FASTA)	NCBI Sequence Viewer
	XP_017172261	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI19521	(Get FASTA)	NCBI Sequence Viewer
	BAB30005	(Get FASTA)	NCBI Sequence Viewer
	EDL04517	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000023089
	ENSMUSP00000023089.4
GenBank Protein	Q9D529	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_083342 ⟸ NM_029066

- UniProtKB:

Q9D529 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MAVNQNHTVDRRWAAIPHGESLLKKCSEVDLSFPQSPPGSNLFSGTKRGALFLTSYRVIFVTSR
ADNDPMFSFTMPFHLMNNCTVEQPIFGANYIKGTIQAAPDGGWEGSATFKIVFRKGGAIDFAQL
MAKAASAAAQGVPLRVASFWMGPLGIYVITGDRNMYAPQAYQVAYGAPPAGYGASPVGYGVPSA
GYGAPPAGYGAPPVGYVAPSPGYDVLPPGYGAVRYGSPPPLYVATPMGYGVPPPGYGPPPVRYG
SPPPGYEAPTMEYGAQPPRYGTTPMGSGSPPPRYEAPPMGYGTPPSGRESIPPGSRATSVAQEA
PPAGSEAGHPMSVAVQNPEFQASFPSTSSSQVHSPRSKM

hide sequence

RefSeq Acc Id:

XP_017172261 ⟸ XM_017316772

- Peptide Label:

isoform X1

- Sequence:

show sequence

MAVNQNHTVDRRWAAIPHGERCLRGLSGCCQGGRRCSGLLKKCSEVDLSFPQSPPGSNLFSGTK
RGALFLTSYRVIFVTSRADNDPMFSFTMPFHLMNNCTVEQPIFGANYIKGTIQAAPDGGWEGSA
TFKIVFRKGGAIDFAQLMAKAASAAAQGVPLRVASFWMGPLGIYVITGDRNMYAPQAYQVAYGA
PPAGYGASPVGYGVPSAGYGAPPAGYGAPPVGYVAPSPGYDVLPPGYGAVRYGSPPPLYVATPM
GYGVPPPGYGPPPVRYGSPPPGYEAPTMEYGAQPPRYGTTPMGSGSPPPRYEAPPMGYGTPPSG
RESIPPGSRATSVAQEAPPAGSEAGHPMSVAVQNPEFQASFPSTSSSQVHSPRSKM

hide sequence

Ensembl Acc Id:

ENSMUSP00000023089 ⟸ ENSMUST00000023089

Protein Domains

GRAM

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9D529-F1-model_v2	AlphaFold	Q9D529	1-359	view protein structure

Promoters

RGD ID:

8684504

Promoter ID:

EPDNEW_M20283

Type:

multiple initiation site

Name:

Wbp2nl_1

Description:

Mus musculus WBP2 N-terminal like , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	15	82,298,954 - 82,299,014	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1921966	AgrOrtholog
Ensembl Genes	ENSMUSG00000022455	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000023089	ENTREZGENE
	ENSMUST00000023089.5	UniProtKB/Swiss-Prot
InterPro	GRAM	UniProtKB/Swiss-Prot
	WBP2-like	UniProtKB/Swiss-Prot
KEGG Report	mmu:74716	UniProtKB/Swiss-Prot
MGD	MGI:1921966	ENTREZGENE
NCBI Gene	74716	ENTREZGENE
PANTHER	PTHR31606	UniProtKB/Swiss-Prot
	PTHR31606:SF2	UniProtKB/Swiss-Prot
Pfam	GRAM	UniProtKB/Swiss-Prot
PhenoGen	Wbp2nl	PhenoGen
Superfamily-SCOP	PH domain-like	UniProtKB/Swiss-Prot
UniProt	Q9D529	ENTREZGENE, UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar