Tjp3 (tight junction protein 3) - Rat Genome Database

Name: Tjp3
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Tjp3 (tight junction protein 3) Mus musculus

Analyze

Symbol:

Tjp3

Name:

tight junction protein 3

RGD ID:

1319484

MGI Page

MGI

Description:

Predicted to have cell adhesion molecule binding activity. Involved in regulation of G1/S transition of mitotic cell cycle. Localizes to several cellular components, including apical plasma membrane; bicellular tight junction; and cytosol. Is expressed in alimentary system epithelium and genitourinary system. Orthologous to human TJP3 (tight junction protein 3); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 4-hydroxyphenyl retinamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Also known as:

tight junction protein ZO-3; ZO-; ZO-3; zona occludens protein 3; zonula occludens protein 3

RGD Orthologs

Human

Rat

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TJP3 (tight junction protein 3)	HGNC	Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Rattus norvegicus (Norway rat):	Tjp3 (tight junction protein 3)	HGNC	NCBI, OMA, HomoloGene, Inparanoid, Panther, OrthoDB, Ensembl
Chinchilla lanigera (long-tailed chinchilla):	Tjp3 (tight junction protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TJP3 (tight junction protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TJP3 (tight junction protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tjp3 (tight junction protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TJP3 (tight junction protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	TJP3 (tight junction protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tjp3 (tight junction protein 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	TJP1 (tight junction protein 1)	HGNC	OrthoMCL
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Tjp3 (tight junction protein 3)	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|TreeFam)
Homo sapiens (human):	TJP3 (tight junction protein 3)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)
Caenorhabditis elegans (roundworm):	zoo-1	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)
Drosophila melanogaster (fruit fly):	pyd	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup)

Latest Assembly:

GRCm38 - Mouse Genome Assembly GRCm38

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	81,109,022 - 81,127,415 (-)	NCBI	GRCm39		mm39
GRCm38	10	81,273,188 - 81,291,581 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	81,273,207 - 81,291,581 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	80,735,945 - 80,754,012 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	10	80,676,357 - 80,694,363 (-)	NCBI			mm8
Celera	10	82,293,548 - 82,311,616 (-)	NCBI		Celera
Cytogenetic Map	10	C1	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

amenorrhea (ISO)

COVID-19 (ISO)

Prostatic Neoplasms (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (EXP)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,3,7,8-Tetrachlorodibenzofuran (ISO)

2,4-dinitrotoluene (ISO)

2,6-dinitrotoluene (ISO)

2-hydroxypropanoic acid (ISO)

4-hydroxyphenyl retinamide (EXP)

5-aza-2'-deoxycytidine (ISO)

5-fluorouracil (ISO)

6-propyl-2-thiouracil (ISO)

acetamide (ISO)

aflatoxin B1 (ISO)

aflatoxin B2 (ISO)

amiodarone (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (EXP,ISO)

benzo[b]fluoranthene (EXP)

bisphenol A (ISO)

cadmium dichloride (ISO)

calcitriol (ISO)

carbon nanotube (EXP)

chloroprene (EXP)

ciguatoxin CTX1B (EXP)

cisplatin (ISO)

cyclosporin A (EXP,ISO)

diuron (ISO)

dorsomorphin (ISO)

endosulfan (ISO)

entinostat (ISO)

hypochlorous acid (EXP)

isotretinoin (ISO)

lead diacetate (EXP)

methotrexate (EXP,ISO)

methylmercury chloride (EXP)

N-methyl-4-phenylpyridinium (ISO)

N-Nitrosopyrrolidine (ISO)

nickel atom (ISO)

O-methyleugenol (ISO)

paclitaxel (ISO)

paracetamol (EXP,ISO)

PCB138 (ISO)

phenobarbital (EXP)

phenylmercury acetate (ISO)

pirinixic acid (EXP)

pregnenolone 16alpha-carbonitrile (EXP)

progesterone (EXP)

rac-lactic acid (ISO)

resveratrol (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

sulforaphane (ISO)

tamoxifen (EXP)

testosterone (ISO)

titanium dioxide (EXP)

trichostatin A (ISO)

urethane (ISO)

valproic acid (EXP,ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell-cell adhesion (IBA)

cell-cell junction organization (IBA)

establishment of endothelial intestinal barrier (IBA)

positive regulation of blood-brain barrier permeability (IBA)

protein localization to cell-cell junction (IBA)

regulation of G1/S transition of mitotic cell cycle (IGI)

Cellular Component

apical plasma membrane (IDA)

bicellular tight junction (IBA,IDA,ISO)

cell junction (ISO)

cell surface (ISO)

cell-cell junction (IDA,ISO)

cytosol (IDA)

membrane (IEA)

nucleoplasm (ISO)

nucleus (IDA,ISO)

plasma membrane (IBA,ISO)

tight junction (ISO)

Molecular Function

cell adhesion molecule binding (IBA)

protein binding (IPI,ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

no abnormal phenotype detected (IAGP)

References

References - curated


1.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2.	MGD and Homologene mouse data transfer
3.	MGD data from the GO Consortium
4.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5.	RGD automated import pipeline
6.	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7.	RGD automated import pipeline for gene-chemical interactions
8.	Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:10601346	PMID:11042159	PMID:11076861	PMID:11557048	PMID:12477932	PMID:12507281	PMID:14622136	PMID:16141072	PMID:16141073	PMID:17000770
PMID:18172007	PMID:18287559	PMID:18353970	PMID:18554416	PMID:18804439	PMID:19538286	PMID:21411630	PMID:21677750	PMID:21873635	PMID:25486565	PMID:29237740

Genomics

Comparative Map Data

Tjp3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	81,109,022 - 81,127,415 (-)	NCBI	GRCm39		mm39
GRCm38	10	81,273,188 - 81,291,581 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	81,273,207 - 81,291,581 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	80,735,945 - 80,754,012 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	10	80,676,357 - 80,694,363 (-)	NCBI			mm8
Celera	10	82,293,548 - 82,311,616 (-)	NCBI		Celera
Cytogenetic Map	10	C1	NCBI

TJP3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	19	3,708,362 - 3,750,813 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	19	3,708,384 - 3,750,813 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	19	3,708,382 - 3,750,811 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
GRCh37	19	3,708,335 - 3,750,811 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	3,679,374 - 3,701,682 (+)	NCBI	NCBI36		hg18	NCBI36
Build 34	19	3,679,373 - 3,701,682	NCBI
Celera	19	3,665,215 - 3,688,325 (+)	NCBI
Cytogenetic Map	19	p13.3	NCBI
HuRef	19	3,472,758 - 3,515,524 (+)	NCBI		HuRef
CHM1_1	19	3,707,932 - 3,750,434 (+)	NCBI		CHM1_1

Tjp3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	7	8,427,650 - 8,446,279 (+)	NCBI
Rnor_6.0 Ensembl	7	11,295,892 - 11,315,615 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	7	11,295,892 - 11,314,535 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	7	11,463,323 - 11,481,943 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	9,917,359 - 9,930,081 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	7	9,919,330 - 9,929,982 (+)	NCBI
Celera	7	6,622,067 - 6,634,606 (+)	NCBI		Celera
Cytogenetic Map	7	q11	NCBI

Tjp3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955495	5,630,066 - 5,647,090 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955495	5,620,817 - 5,647,211 (+)	NCBI	ChiLan1.0	ChiLan1.0

TJP3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	19	3,682,654 - 3,722,833 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	3,682,654 - 3,722,833 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	19	2,733,016 - 2,774,469 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

TJP3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	20	55,720,632 - 55,746,965 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	20	55,720,632 - 55,746,776 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Tjp3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936588	2,112,352 - 2,124,204 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TJP3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	74,938,152 - 74,971,555 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	74,938,153 - 74,971,431 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	75,529,624 - 75,562,870 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TJP3
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	3,474,639 - 3,505,801 (+)	NCBI
ChlSab1.1 Ensembl	6	3,481,060 - 3,505,678 (+)	Ensembl

Tjp3
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624828	6,374,678 - 6,398,483 (+)	NCBI

Position Markers

RH128401

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	10	81,272,933 - 81,273,196	UniSTS	GRCm38
MGSCv37	10	80,735,678 - 80,735,941	UniSTS	GRCm37
Celera	10	82,293,281 - 82,293,544	UniSTS
Cytogenetic Map	10	C1	UniSTS

RH131893

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	10	81,273,237 - 81,273,386	UniSTS	GRCm38
MGSCv37	10	80,735,982 - 80,736,131	UniSTS	GRCm37
Celera	10	82,293,585 - 82,293,734	UniSTS
Cytogenetic Map	10	C1	UniSTS

QTLs in Region (GRCm38)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1357740	Obsty3_m	obesity 3 (mouse)			Not determined		10	8359714	116355075	Mouse
1301386	Sysbp1_m	systolic blood pressure 1 (mouse)			Not determined		10	10232521	87565233	Mouse
1357825	Kidpq2_m	kidney weight percentage QTL 2 (mouse)			Not determined		10	12828307	84243920	Mouse
1357656	Hrtq3_m	heart weight QTL 3 (mouse)			Not determined		10	12828307	84243920	Mouse
1357864	Scfpq1_m	subcutaneous fat pad percentage QTL 1 (mouse)			Not determined		10	12828307	84243920	Mouse
1357893	Lvrq4_m	liver weight QTL 4 (mouse)			Not determined		10	12828307	84243920	Mouse
4142380	W3q11_m	weight 3 weeks QTL 11 (mouse)			Not determined			12828307	84243920	Mouse
4141943	W6q6_m	weight 6 weeks QTL 6 (mouse)			Not determined			12828307	84243920	Mouse
4141956	Egq7_m	early growth QTL 7 (mouse)			Not determined			12828307	84243920	Mouse
4142272	W10q5_m	weight 10 weeks QTL 5 (mouse)			Not determined			12828307	84243920	Mouse
39128215	Lwq17_m	liver weight QTL 17 (mouse)					10	12828307	84243920	Mouse
1302067	Scc9_m	colon tumor susceptibility 9 (mouse)			Not determined		10	18383585	125739363	Mouse
27226772	Tibl13_m	tibia length 13, 10 week (mouse)					10	19000000	129800000	Mouse
1558757	Eae34_m	experimental allergic encephalomyelitis susceptibility 34 (mouse)			Not determined		10	21532255	114381325	Mouse
26884403	Cvht8_m	cranial vault height 8, 16 week (mouse)					10	23000000	91200000	Mouse
26884426	Cvht1_m	cranial vault height 1, 5 week (mouse)					10	24800000	121200000	Mouse
27095911	Pglq15_m	pelvic girdle length QTL 15, 16 week (mouse)					10	39300000	129800000	Mouse
27226764	Tibl19_m	tibia length 19, 16 week (mouse)					10	39300000	129800000	Mouse
26884411	Bzwq8_m	bi-zygomatic width QTL 8, 10 week (mouse)					10	45000000	116100000	Mouse
26884407	Bzwq14_m	bi-zygomatic width QTL 14, 16 wee (mouse)					10	45600000	120800000	Mouse
4142313	Angvq1_m	angiogenesis by VEGF QTL 1 (mouse)			Not determined			46844307	82655287	Mouse
1302150	Bbaa18_m	B.burgdorferi-associated arthritis 18 (mouse)			Not determined		10	49502233	83502378	Mouse
4142169	Pbwg16_m	postnatal body weight growth 16 (mouse)			Not determined		10	50012408	84012633	Mouse
1300597	Skull14_m	skull morphology 14 (mouse)			Not determined		10	50012408	84012633	Mouse
10045641	Jckm3_m	juvenile cystic kidney modifier 3 (mouse)			Not determined		10	50012408	84012633	Mouse
1301966	Lifespan2_m	life span 2 (mouse)			Not determined		10	50012443	84012618	Mouse
1357737	Hpcr2_m	hepatocarcinogen resistance 2 (mouse)			Not determined		10	50012443	84012618	Mouse
1300882	Ath17_m	atherosclerosis 17 (mouse)			Not determined		10	51255660	85255809	Mouse
1301502	Eae17_m	susceptibility to experimental allergic encephalomyelitis 17 (mouse)			Not determined		10	51255660	85255809	Mouse
1301380	Cia8_m	collagen induced arthritis QTL 8 (mouse)			Not determined		10	51617304	82655287	Mouse
14746991	Manh68_m	mandible shape 68 (mouse)					10	52444667	86444667	Mouse
1301787	Bsc1_m	brain size control 1 (mouse)			Not determined		10	58681135	92681262	Mouse
26884450	Sklq15_m	skull length QTL 15, 16 week (mouse)					10	59500000	122500000	Mouse
13208560	Wght9_m	weight 9 (mouse)					10	60000000	121000000	Mouse
26884424	Zlq9_m	zygomatic length QTL 9, 16 week (mouse)					10	64100000	116100000	Mouse
1302060	El3_m	epilepsy 3 (mouse)			Not determined		10	65655104	99655287	Mouse
1300533	Aem3_m	anti-erythrocyte autoantibody modifier 3 (mouse)			Not determined		10	65655104	99655287	Mouse
1301737	Insq9_m	insulin QTL 9 (mouse)			Not determined		10	65655104	99655287	Mouse
1302035	Lmb4_m	lupus in MRL and B6 F2 cross (mouse)			Not determined		10	67012408	92422811	Mouse
26884447	Sklq9_m	skull length QTL 9, 10 week (mouse)					10	67500000	111900000	Mouse
26884430	Zlq5_m	zygomatic length QTL 5, 10 week (mouse)					10	68000000	125000000	Mouse
26884405	Huml2_m	humerus length 2, 5 week (mouse)					10	69900000	132500000	Mouse
11039497	Ltpr5a_m	Leishmania tropica response 5a (mouse)					10	73671039	107671185	Mouse
4142107	Obrq12_m	obesity resistance QTL 12 (mouse)			Not determined			74151384	82655287	Mouse
11353832	Pcholq4_m	plasma cholesterol QTL 4 (mouse)					10	74151384	125680038	Mouse
11353843	Gluq1_m	blood glucose QTL 1 (mouse)					10	74151384	125680038	Mouse
1300975	Fembrs3_m	femur breaking strength 3 (mouse)			Not determined		10	75502706	109502905	Mouse
4142137	Femwf3_m	femur work to failure 3 (mouse)			Not determined			75502706	109502905	Mouse
1357632	Vtbt9_m	vertebral trabecular bone trait 9 (mouse)			Not determined		10	75502706	109502905	Mouse
11251717	Siim1_m	stress induced immobility 1 (mouse)					10	78545406	112545406	Mouse

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	106
Count of miRNA genes:	103
Interacting mature miRNAs:	106
Transcripts:	ENSMUST00000045744
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001282095	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001282096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_013769	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006513708	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC155932	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC155937	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF157006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK008855	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK029083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK134100	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK167587	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AV236903	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC012518	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BG228652	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY102203	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466553	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CJ048976	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSMUST00000045744 ⟹ ENSMUSP00000036438

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	10	81,273,207 - 81,291,267 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000218484 ⟹ ENSMUSP00000151819

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	10	81,281,187 - 81,285,769 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000218520

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	10	81,278,624 - 81,280,117 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000218966

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	10	81,282,999 - 81,285,781 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000219479 ⟹ ENSMUSP00000151601

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	10	81,273,228 - 81,291,581 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000219958

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	10	81,282,777 - 81,291,215 (-)	Ensembl

RefSeq Acc Id:

NM_001282095 ⟹ NP_001269024

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	10	81,109,022 - 81,127,415 (-)	NCBI
GRCm38	10	81,273,188 - 81,291,581 (-)	NCBI
Celera	10	82,293,536 - 82,311,930 (-)	NCBI

Sequence:

show sequence

AGTCAGGGGTGGAGTTCCCGCCTAGAATCCCATAGTAATGAGCTGGGCTGTGGCTCCATGAGAG
TTTTGATTATTCCAGTGTCCCCCCTTGTGATGAAAGCTGGAAGCTTGACAGCGGGTGGCAGACA
TGGAAGAGCTGACCATCTGGGAACAACACACAGCCACACTGTACAAGGACCCCCGCCGCGGCTT
CGGCATAGCTGTCTCTGGAGGCCATGACCGAGCTAGTGGATCCGTGGTGGTGTCTGATGTGGTA
CCAGGAGGCCCCGCTGAGGGCCGGCTCCGGACCGGGGACCACATCGTCATGGTGAATGGTGTCT
CTGTGGAGAACGTCACATCTGCCTTTGCCATCCAGATCCTTAAGACCTGCACCAAAACAGCCAA
CGTTACAGTGAAGCGTCCCCGCAGGGTCCAGCTGCCTGCCACCAAGGCTAGCCCAGCTTCTGGC
CACCAGCTCTCAGACCAGGAAGAAGCTGACCATGGCCGGGGCTATGAGGGGGACTCCTCCAGTG
GCTCAGGTCGATCATGGGGTGAGCGTTCTCGCCGGTCCAGGGCAGGTCGCCGCGGCAGGGTAGG
CAGCCATGGGCGCCGGAGTTCGGGTGGCGGATCTGAAGCCAACGGTCTGGACCTGGTGTCTGGC
TATAAGCGCTTGCCGAAGCAGGATGTGCTAATGAGGCCACTAAAGTCCGTGCTGGTGAAACGAA
GAAACAGCGAAGAGTTTGGGGTGAAGCTAGGCAGTCAGATCTTTATAAAACACATCACGGAATC
TGGCCTTGCTGCTCGGAACCATGGGCTGCAGGAGGGAGACCTTATCTTACAGATCAACGGGGTG
TCCAGTGCTAATCTGTCCCTGAGTGACACACGAAGGCTCATTGAGAAGTCGGAGGGGGAGCTGA
CGTTGCTGGTGCTAAGAGACAGTGGGCAGTTCCTGGTGAACATCCCTCCCGCAGTGAGCGACAG
CGACAGCTCCCTAATGGAAGACATCTCAGACCTGACCTCAGAATTGTCCCAGGCGCCCCCTTCC
CACGTTCCTCCGCCACCTCTGAAGGGTCAGAGGAGCCCTGAGGACAGCCAGACAGACTCCCCAG
TGGAGACCCCGCAGCCCCGGAGGCGGGAACGGTCAGTGAATTCAAGAGCCATCGCTGAACCAGA
GTCTCCTGGAGAAAGCCGCTATGACATTTACAGGGTTCCTAGCCGGCAGAGCCTGGAGGACCGT
GGCTACAGCCCCGACACTCGTGTCGTGAGCTTCCCCAAGGGCGCGAGTATTGGCTTGCGGCTGG
CCGGCGGCAACGACGTGGGCATCTTCGTATCCGGGGTGCAGGCAGGCAGCCCGGCCGACGGGCA
AGGCATCCAGGAAGGGGATGAGATCTTGCAGGTGAATGGTATGCCATTTCGGAACCTGACTCGG
GAGGAGGCCGTGCAGTTTCTGTTGGGGCTGCCTCCAGGGGAAGACATGGAGCTGGTAACACAGA
GCAAACAGGACATCTTTAAGAAGATGGTCCAGTCTCGCGTGGGTGACTCCTTCTACATCCGCAC
ACACTTTGAGCTGGAGCCGAGCCCACCCTATGGCCTGGGCTTCACCCGCGGTGATGTCTTCCAC
GTAGTGGACACGTTGTACCCGGGCTCCGGGCCAGGCCATGGGCACAGCAGCCATGGGGGCCTCT
GGCTGGCCGCCCGCATGGGCAGAGATCTGCGAGAGCAAGAACGCGGCGTCATCCCCAACCAGAG
CAGGGCCGAGCAGCTGGCCAGTCTGGAGGCTGCGCAGCGGGCCGCGGGCGTGGGGCCAGGCGCC
TCAGTGGGTTCCAACCCACGGGCGGAGTTTTGGCGACTCCGAGGTCTCCGCCGAGGGACCAAGA
AGGCGTCGACCCAGCGGAGCCGCGAGGACCTATCAGCGCTGACCAGGCAGGGACACTACCCGCC
CTATGAGCGTGTGGTGCTCAGAGAAGCCAGTTTTAAGCGCCCCGTGGTGATCCTAGGACCAGTG
GCAGACATTGCCATGAAGAAACTGACCACAGAGATGCCAGAAGAGTTTGAGATTGCAGAAAGCA
TGTCCCGGACTGACAGCCCATCCAAGATCATCAAACTGGACACAGTGCGGGTGATCGCAGAGAG
GGATAAGCACGCACTCCTGGATGTCACCCCCTCTGCCATCGAGCGCCTCAACTACGTGCAGTAC
TACCCCATCGTCATCTTTTGTGCCCCAGAGAGCCGGCCGGCCCTCAAGGCCCTCCGGGAGTGGC
TGGCCCCGGCCTCTCGCCGCAGCAGCCGCCGCCTGTATGCGCAGGCCCAGAAACTGCAGAAACA
CAGTGGCCACCTCTTCACCGCCACCATCCCCCTGCATGGCACTAGTGACTCCTGGTACCAGGAA
GTCAAGGCTGTAATACAGCAACAGCAGGCGCGACCGATCTGGACCGCGGAGGACCAGCTGAACA
GCTCATCCGAGGACCTTGACCTGCCGGGCCATGGTCTGGCCGCCAGCTCTGGAGACCTCAGCTG
TGACAGTCGGACCAACAGCGACTATGAGGACACCGACGGCGAGGGCGCCTATACGGACAGAGAG
GGCGGACCCCAGGATGTCGATGAGGAGGTCGCACCCACAGCCCTGGCCCGGTCCTCAGAGCCCG
TATGGGTAGATGATCACCAGGGGCTGATGGGTCATGGGACAACTATCACAGACAAATGGGAGAC
ACAGGCTGACAGCCACTACACCCAGGACCAGCGGCGCCAGGACAGCATGCGGACCTACAAGCAC
GAGGCCCTGAGGAAGAAGTTCACAAGAGCCCGGGATGTGGAATCCTCTGATGACGAGGGCTATG
ACTGGGGCCCAGCCACCGACCTGTGACCTATGCAGTCACCAGCGTGCCACAAGCCCTCAAGCTT
CTGACCACTTAATAAATCTTTAAAAAAAATTTTTTATATTAGAAAATAATACAAGACTGAG

hide sequence

RefSeq Acc Id:

NM_001282096 ⟹ NP_001269025

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	10	81,109,022 - 81,121,615 (-)	NCBI
GRCm38	10	81,273,188 - 81,285,781 (-)	NCBI
Celera	10	82,293,536 - 82,311,930 (-)	NCBI

Sequence:

show sequence

AGGTGCAGCCGTGAGCGGCTGGCGGAGCCCTAGAAAGGCGGGAGCGCGGCCCCAACCCCGTCGC
GACCACCTCCCAGCCCAAAGTGGGGGCTGATTGTTTCCAGGCCCCTCCTGGTCCATGGTGGGGG
CTGCCTGACCGTTTCCAGGACGCTTGCTGTGCACCATGGCGGTGAGATTCCAGGTGGCAGACAT
GGAAGAGCTGACCATCTGGGAACAACACACAGCCACACTGTACAAGGACCCCCGCCGCGGCTTC
GGCATAGCTGTCTCTGGAGGCCATGACCGAGCTAGTGGATCCGTGGTGGTGTCTGATGTGGTAC
CAGGAGGCCCCGCTGAGGGCCGGCTCCGGACCGGGGACCACATCGTCATGGTGAATGGTGTCTC
TGTGGAGAACGTCACATCTGCCTTTGCCATCCAGATCCTTAAGACCTGCACCAAAACAGCCAAC
GTTACAGTGAAGCGTCCCCGCAGGGTCCAGCTGCCTGCCACCAAGGCTAGCCCAGCTTCTGGCC
ACCAGCTCTCAGACCAGGAAGAAGCTGACCATGGCCGGGGCTATGAGGGGGACTCCTCCAGTGG
CTCAGGTCGATCATGGGGTGAGCGTTCTCGCCGGTCCAGGGCAGGTCGCCGCGGCAGGGTAGGC
AGCCATGGGCGCCGGAGTTCGGGTGGCGGATCTGAAGCCAACGGTCTGGACCTGGTGTCTGGCT
ATAAGCGCTTGCCGAAGCAGGATGTGCTAATGAGGCCACTAAAGTCCGTGCTGGTGAAACGAAG
AAACAGCGAAGAGTTTGGGGTGAAGCTAGGCAGTCAGATCTTTATAAAACACATCACGGAATCT
GGCCTTGCTGCTCGGAACCATGGGCTGCAGGAGGGAGACCTTATCTTACAGATCAACGGGGTGT
CCAGTGCTAATCTGTCCCTGAGTGACACACGAAGGCTCATTGAGAAGTCGGAGGGGGAGCTGAC
GTTGCTGGTGCTAAGAGACAGTGGGCAGTTCCTGGTGAACATCCCTCCCGCAGTGAGCGACAGC
GACAGCTCCCTAATGGAAGACATCTCAGACCTGACCTCAGAATTGTCCCAGGCGCCCCCTTCCC
ACGTTCCTCCGCCACCTCTGAAGGGTCAGAGGAGCCCTGAGGACAGCCAGACAGACTCCCCAGT
GGAGACCCCGCAGCCCCGGAGGCGGGAACGGTCAGTGAATTCAAGAGCCATCGCTGAACCAGAG
TCTCCTGGAGAAAGCCGCTATGACATTTACAGGGTTCCTAGCCGGCAGAGCCTGGAGGACCGTG
GCTACAGCCCCGACACTCGTGTCGTGAGCTTCCCCAAGGGCGCGAGTATTGGCTTGCGGCTGGC
CGGCGGCAACGACGTGGGCATCTTCGTATCCGGGGTGCAGGCAGGCAGCCCGGCCGACGGGCAA
GGCATCCAGGAAGGGGATGAGATCTTGCAGGTGAATGGTATGCCATTTCGGAACCTGACTCGGG
AGGAGGCCGTGCAGTTTCTGTTGGGGCTGCCTCCAGGGGAAGACATGGAGCTGGTAACACAGAG
CAAACAGGACATCTTTAAGAAGATGGTCCAGTCTCGCGTGGGTGACTCCTTCTACATCCGCACA
CACTTTGAGCTGGAGCCGAGCCCACCCTATGGCCTGGGCTTCACCCGCGGTGATGTCTTCCACG
TAGTGGACACGTTGTACCCGGGCTCCGGGCCAGGCCATGGGCACAGCAGCCATGGGGGCCTCTG
GCTGGCCGCCCGCATGGGCAGAGATCTGCGAGAGCAAGAACGCGGCGTCATCCCCAACCAGAGC
AGGGCCGAGCAGCTGGCCAGTCTGGAGGCTGCGCAGCGGGCCGCGGGCGTGGGGCCAGGCGCCT
CAGTGGGTTCCAACCCACGGGCGGAGTTTTGGCGACTCCGAGGTCTCCGCCGAGGGACCAAGAA
GGCGTCGACCCAGCGGAGCCGCGAGGACCTATCAGCGCTGACCAGGCAGGGACACTACCCGCCC
TATGAGCGTGTGGTGCTCAGAGAAGCCAGTTTTAAGCGCCCCGTGGTGATCCTAGGACCAGTGG
CAGACATTGCCATGAAGAAACTGACCACAGAGATGCCAGAAGAGTTTGAGATTGCAGAAAGCAT
GTCCCGGACTGACAGCCCATCCAAGATCATCAAACTGGACACAGTGCGGGTGATCGCAGAGAGG
GATAAGCACGCACTCCTGGATGTCACCCCCTCTGCCATCGAGCGCCTCAACTACGTGCAGTACT
ACCCCATCGTCATCTTTTGTGCCCCAGAGAGCCGGCCGGCCCTCAAGGCCCTCCGGGAGTGGCT
GGCCCCGGCCTCTCGCCGCAGCAGCCGCCGCCTGTATGCGCAGGCCCAGAAACTGCAGAAACAC
AGTGGCCACCTCTTCACCGCCACCATCCCCCTGCATGGCACTAGTGACTCCTGGTACCAGGAAG
TCAAGGCTGTAATACAGCAACAGCAGGCGCGACCGATCTGGACCGCGGAGGACCAGCTGAACAG
CTCATCCGAGGACCTTGACCTGCCGGGCCATGGTCTGGCCGCCAGCTCTGGAGACCTCAGCTGT
GACAGTCGGACCAACAGCGACTATGAGGACACCGACGGCGAGGGCGCCTATACGGACAGAGAGG
GCGGACCCCAGGATGTCGATGAGGAGGTCGCACCCACAGCCCTGGCCCGGTCCTCAGAGCCCGT
ATGGGTAGATGATCACCAGGGGCTGATGGGTCATGGGACAACTATCACAGACAAATGGGAGACA
CAGGCTGACAGCCACTACACCCAGGACCAGCGGCGCCAGGACAGCATGCGGACCTACAAGCACG
AGGCCCTGAGGAAGAAGTTCACAAGAGCCCGGGATGTGGAATCCTCTGATGACGAGGGCTATGA
CTGGGGCCCAGCCACCGACCTGTGACCTATGCAGTCACCAGCGTGCCACAAGCCCTCAAGCTTC
TGACCACTTAATAAATCTTTAAAAAAAATTTTTTATATTAGAAAATAATACAAGACTGAG

hide sequence

RefSeq Acc Id:

NM_013769 ⟹ NP_038797

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	10	81,109,022 - 81,127,101 (-)	NCBI
GRCm38	10	81,273,188 - 81,291,267 (-)	NCBI
MGSCv37	10	80,735,945 - 80,754,012 (-)	RGD
Celera	10	82,293,536 - 82,311,930 (-)	NCBI
cM Map	10		ENTREZGENE

Sequence:

show sequence

CTCTTGCACTCACAATTGCGCACAACCTGCACAGTCCTGCCGGTTCCACCCGGCAAAGGGACTC
GCCCACCGTTCCTTCCACTCCGCTTTCGCTGAGCAAACAGGTTGCCCGGCCCGAGCAGCCAGCT
CGGGTCTCCTCCCTGCCACCCATGCCTGACAGCTATCCAGGACCCAGCTTCCACCTCCCACCCT
GCGTCCATTCACTCAGCCTTCCAGACCGGTGGCAGACATGGAAGAGCTGACCATCTGGGAACAA
CACACAGCCACACTGTACAAGGACCCCCGCCGCGGCTTCGGCATAGCTGTCTCTGGAGGCCATG
ACCGAGCTAGTGGATCCGTGGTGGTGTCTGATGTGGTACCAGGAGGCCCCGCTGAGGGCCGGCT
CCGGACCGGGGACCACATCGTCATGGTGAATGGTGTCTCTGTGGAGAACGTCACATCTGCCTTT
GCCATCCAGATCCTTAAGACCTGCACCAAAACAGCCAACGTTACAGTGAAGCGTCCCCGCAGGG
TCCAGCTGCCTGCCACCAAGGCTAGCCCAGCTTCTGGCCACCAGCTCTCAGACCAGGAAGAAGC
TGACCATGGCCGGGGCTATGAGGGGGACTCCTCCAGTGGCTCAGGTCGATCATGGGGTGAGCGT
TCTCGCCGGTCCAGGGCAGGTCGCCGCGGCAGGGTAGGCAGCCATGGGCGCCGGAGTTCGGGTG
GCGGATCTGAAGCCAACGGTCTGGACCTGGTGTCTGGCTATAAGCGCTTGCCGAAGCAGGATGT
GCTAATGAGGCCACTAAAGTCCGTGCTGGTGAAACGAAGAAACAGCGAAGAGTTTGGGGTGAAG
CTAGGCAGTCAGATCTTTATAAAACACATCACGGAATCTGGCCTTGCTGCTCGGAACCATGGGC
TGCAGGAGGGAGACCTTATCTTACAGATCAACGGGGTGTCCAGTGCTAATCTGTCCCTGAGTGA
CACACGAAGGCTCATTGAGAAGTCGGAGGGGGAGCTGACGTTGCTGGTGCTAAGAGACAGTGGG
CAGTTCCTGGTGAACATCCCTCCCGCAGTGAGCGACAGCGACAGCTCCCTAATGGAAGACATCT
CAGACCTGACCTCAGAATTGTCCCAGGCGCCCCCTTCCCACGTTCCTCCGCCACCTCTGAAGGG
TCAGAGGAGCCCTGAGGACAGCCAGACAGACTCCCCAGTGGAGACCCCGCAGCCCCGGAGGCGG
GAACGGTCAGTGAATTCAAGAGCCATCGCTGAACCAGAGTCTCCTGGAGAAAGCCGCTATGACA
TTTACAGGGTTCCTAGCCGGCAGAGCCTGGAGGACCGTGGCTACAGCCCCGACACTCGTGTCGT
GAGCTTCCCCAAGGGCGCGAGTATTGGCTTGCGGCTGGCCGGCGGCAACGACGTGGGCATCTTC
GTATCCGGGGTGCAGGCAGGCAGCCCGGCCGACGGGCAAGGCATCCAGGAAGGGGATGAGATCT
TGCAGGTGAATGGTATGCCATTTCGGAACCTGACTCGGGAGGAGGCCGTGCAGTTTCTGTTGGG
GCTGCCTCCAGGGGAAGACATGGAGCTGGTAACACAGAGCAAACAGGACATCTTTAAGAAGATG
GTCCAGTCTCGCGTGGGTGACTCCTTCTACATCCGCACACACTTTGAGCTGGAGCCGAGCCCAC
CCTATGGCCTGGGCTTCACCCGCGGTGATGTCTTCCACGTAGTGGACACGTTGTACCCGGGCTC
CGGGCCAGGCCATGGGCACAGCAGCCATGGGGGCCTCTGGCTGGCCGCCCGCATGGGCAGAGAT
CTGCGAGAGCAAGAACGCGGCGTCATCCCCAACCAGAGCAGGGCCGAGCAGCTGGCCAGTCTGG
AGGCTGCGCAGCGGGCCGCGGGCGTGGGGCCAGGCGCCTCAGTGGGTTCCAACCCACGGGCGGA
GTTTTGGCGACTCCGAGGTCTCCGCCGAGGGACCAAGAAGGCGTCGACCCAGCGGAGCCGCGAG
GACCTATCAGCGCTGACCAGGCAGGGACACTACCCGCCCTATGAGCGTGTGGTGCTCAGAGAAG
CCAGTTTTAAGCGCCCCGTGGTGATCCTAGGACCAGTGGCAGACATTGCCATGAAGAAACTGAC
CACAGAGATGCCAGAAGAGTTTGAGATTGCAGAAAGCATGTCCCGGACTGACAGCCCATCCAAG
ATCATCAAACTGGACACAGTGCGGGTGATCGCAGAGAGGGATAAGCACGCACTCCTGGATGTCA
CCCCCTCTGCCATCGAGCGCCTCAACTACGTGCAGTACTACCCCATCGTCATCTTTTGTGCCCC
AGAGAGCCGGCCGGCCCTCAAGGCCCTCCGGGAGTGGCTGGCCCCGGCCTCTCGCCGCAGCAGC
CGCCGCCTGTATGCGCAGGCCCAGAAACTGCAGAAACACAGTGGCCACCTCTTCACCGCCACCA
TCCCCCTGCATGGCACTAGTGACTCCTGGTACCAGGAAGTCAAGGCTGTAATACAGCAACAGCA
GGCGCGACCGATCTGGACCGCGGAGGACCAGCTGAACAGCTCATCCGAGGACCTTGACCTGCCG
GGCCATGGTCTGGCCGCCAGCTCTGGAGACCTCAGCTGTGACAGTCGGACCAACAGCGACTATG
AGGACACCGACGGCGAGGGCGCCTATACGGACAGAGAGGGCGGACCCCAGGATGTCGATGAGGA
GGTCGCACCCACAGCCCTGGCCCGGTCCTCAGAGCCCGTATGGGTAGATGATCACCAGGGGCTG
ATGGGTCATGGGACAACTATCACAGACAAATGGGAGACACAGGCTGACAGCCACTACACCCAGG
ACCAGCGGCGCCAGGACAGCATGCGGACCTACAAGCACGAGGCCCTGAGGAAGAAGTTCACAAG
AGCCCGGGATGTGGAATCCTCTGATGACGAGGGCTATGACTGGGGCCCAGCCACCGACCTGTGA
CCTATGCAGTCACCAGCGTGCCACAAGCCCTCAAGCTTCTGACCACTTAATAAATCTTTAAAAA
AAATTTTTTATATTAGAAAATAATACAAGACTGAG

hide sequence

RefSeq Acc Id:

XM_006513708 ⟹ XP_006513771

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	10	81,109,037 - 81,127,365 (-)	NCBI
GRCm38	10	81,273,203 - 81,291,532 (-)	NCBI

Sequence:

show sequence

GTGGCTCCATGAGAGTTTTGATTATTCCAGTGTCCCCCCTTGTGATGAAAGCTGGAAGCTTGAC
AGCGGGCCGGCCTCTCTTGCACTCACAATTGCGCACAACCTGCACAGTCCTGCCGGTTCCACCC
GGCAAAGGGACTCGCCCACCGTTCCTTCCACTCCGCTTTCGCTGAGCAAACAGGTTGCCCGGCC
CGAGCAGCCAGCTCGGGTCTCCTCCCTGCCACCCATGCCTGACAGCTATCCAGGACCCAGCTTC
CACCTCCCACCCTGCGTCCATTCACTCAGCCTTCCAGACCGGTGGCAGACATGGAAGAGCTGAC
CATCTGGGAACAACACACAGCCACACTGTACAAGGACCCCCGCCGCGGCTTCGGCATAGCTGTC
TCTGGAGGCCATGACCGAGCTAGTGGATCCGTGGTGGTGTCTGATGTGGTACCAGGAGGCCCCG
CTGAGGGCCGGCTCCGGACCGGGGACCACATCGTCATGGTGAATGGTGTCTCTGTGGAGAACGT
CACATCTGCCTTTGCCATCCAGATCCTTAAGACCTGCACCAAAACAGCCAACGTTACAGTGAAG
CGTCCCCGCAGGGTCCAGCTGCCTGCCACCAAGGCTAGCCCAGCTTCTGGCCACCAGCTCTCAG
ACCAGGAAGAAGCTGACCATGGCCGGGGCTATGAGGGGGACTCCTCCAGTGGCTCAGGTCGATC
ATGGGGTGAGCGTTCTCGCCGGTCCAGGGCAGGTCGCCGCGGCAGGGTAGGCAGCCATGGGCGC
CGGAGTTCGGGTGGCGGATCTGAAGCCAACGGTCTGGACCTGGTGTCTGGCTATAAGCGCTTGC
CGAAGCAGGATGTGCTAATGAGGCCACTAAAGTCCGTGCTGGTGAAACGAAGAAACAGCGAAGA
GTTTGGGGTGAAGCTAGGCAGTCAGATCTTTATAAAACACATCACGGAATCTGGCCTTGCTGCT
CGGAACCATGGGCTGCAGGAGGGAGACCTTATCTTACAGATCAACGGGGTGTCCAGTGCTAATC
TGTCCCTGAGTGACACACGAAGGCTCATTGAGAAGTCGGAGGGGGAGCTGACGTTGCTGGTGCT
AAGAGACAGTGGGCAGTTCCTGGTGAACATCCCTCCCGCAGTGAGCGACAGCGACAGCTCCCTA
ATGGAAGACATCTCAGACCTGACCTCAGAATTGTCCCAGGCGCCCCCTTCCCACGTTCCTCCGC
CACCTCTGAAGGGTCAGAGGAGCCCTGAGGACAGCCAGACAGACTCCCCAGTGGAGACCCCGCA
GCCCCGGAGGCGGGAACGGTCAGTGAATTCAAGAGCCATCGCTGAACCAGAGTCTCCTGGAGAA
AGCCGCTATGACATTTACAGGGTTCCTAGCCGGCAGAGCCTGGAGGACCGTGGCTACAGCCCCG
ACACTCGTGTCGTGAGCTTCCCCAAGGGCGCGAGTATTGGCTTGCGGCTGGCCGGCGGCAACGA
CGTGGGCATCTTCGTATCCGGGGTGCAGGCAGGCAGCCCGGCCGACGGGCAAGGCATCCAGGAA
GGGGATGAGATCTTGCAGGTGAATGGTATGCCATTTCGGAACCTGACTCGGGAGGAGGCCGTGC
AGTTTCTGTTGGGGCTGCCTCCAGGGGAAGACATGGAGCTGGTAACACAGAGCAAACAGGACAT
CTTTAAGAAGATGGTCCAGTCTCGCGTGGGTGACTCCTTCTACATCCGCACACACTTTGAGCTG
GAGCCGAGCCCACCCTATGGCCTGGGCTTCACCCGCGGTGATGTCTTCCACGTAGTGGACACGT
TGTACCCGGGCTCCGGGCCAGGCCATGGGCACAGCAGCCATGGGGGCCTCTGGCTGGCCGCCCG
CATGGGCAGAGATCTGCGAGAGCAAGAACGCGGCGTCATCCCCAACCAGAGCAGGGCCGAGCAG
CTGGCCAGTCTGGAGGCTGCGCAGCGGGCCGCGGGCGTGGGGCCAGGCGCCTCAGTGGGTTCCA
ACCCACGGGCGGAGTTTTGGCGACTCCGAGGTCTCCGCCGAGGGACCAAGAAGGCGTCGACCCA
GCGGAGCCGCGAGGACCTATCAGCGCTGACCAGGCAGGGACACTACCCGCCCTATGAGCGTGTG
GTGCTCAGAGAAGCCAGTTTTAAGCGCCCCGTGGTGATCCTAGGACCAGTGGCAGACATTGCCA
TGAAGAAACTGACCACAGAGATGCCAGAAGAGTTTGAGATTGCAGAAAGCATGTCCCGGACTGA
CAGCCCATCCAAGATCATCAAACTGGACACAGTGCGGGTGATCGCAGAGAGGGATAAGCACGCA
CTCCTGGATGTCACCCCCTCTGCCATCGAGCGCCTCAACTACGTGCAGTACTACCCCATCGTCA
TCTTTTGTGCCCCAGAGAGCCGGCCGGCCCTCAAGGCCCTCCGGGAGTGGCTGGCCCCGGCCTC
TCGCCGCAGCAGCCGCCGCCTGTATGCGCAGGCCCAGAAACTGCAGAAACACAGTGGCCACCTC
TTCACCGCCACCATCCCCCTGCATGGCACTAGTGACTCCTGGTACCAGGAAGTCAAGGCTGTAA
TACAGCAACAGCAGGCGCGACCGATCTGGACCGCGGAGGACCAGCTGAACAGCTCATCCGAGGA
CCTTGACCTGCCGGGCCATGGTCTGGCCGCCAGCTCTGGAGACCTCAGCTGTGACAGTCGGACC
AACAGCGACTATGAGGACACCGACGGCGAGGGCGCCTATACGGACAGAGAGGGCGGACCCCAGG
ATGTCGATGAGGAGGTCGCACCCACAGCCCTGGCCCGGTCCTCAGAGCCCGTATGGGTAGATGA
TCACCAGGGGCTGATGGGTCATGGGACAACTATCACAGACAAATGGGAGACACAGGCTGACAGC
CACTACACCCAGGACCAGCGGCGCCAGGACAGCATGCGGACCTACAAGCACGAGGCCCTGAGGA
AGAAGTTCACAAGAGCCCGGGATGTGGAATCCTCTGATGACGAGGGCTATGACTGGGGCCCAGC
CACCGACCTGTGACCTATGCAGTCACCAGCGTGCCACAAGCCCTCAAGCTTCTGACCACTTAAT
AAATCTTTAAAAAAAATTTTTTATATTAGAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001269024	(Get FASTA)	NCBI Sequence Viewer
	NP_001269025	(Get FASTA)	NCBI Sequence Viewer
	NP_038797	(Get FASTA)	NCBI Sequence Viewer
	XP_006513771	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAF24175	(Get FASTA)	NCBI Sequence Viewer
	AAH12518	(Get FASTA)	NCBI Sequence Viewer
	BAC26285	(Get FASTA)	NCBI Sequence Viewer
	BAE22013	(Get FASTA)	NCBI Sequence Viewer
	EDL31432	(Get FASTA)	NCBI Sequence Viewer
	EDL31433	(Get FASTA)	NCBI Sequence Viewer
	Q9QXY1	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	NP_038797 ⟸ NM_013769
- Peptide Label:	isoform 2
- UniProtKB:	Q3UZ47 (UniProtKB/TrEMBL), Q921G9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEELTIWEQHTATLYKDPRRGFGIAVSGGHDRASGSVVVSDVVPGGPAEGRLRTGDHIVMVNGV SVENVTSAFAIQILKTCTKTANVTVKRPRRVQLPATKASPASGHQLSDQEEADHGRGYEGDSSS GSGRSWGERSRRSRAGRRGRVGSHGRRSSGGGSEANGLDLVSGYKRLPKQDVLMRPLKSVLVKR RNSEEFGVKLGSQIFIKHITESGLAARNHGLQEGDLILQINGVSSANLSLSDTRRLIEKSEGEL TLLVLRDSGQFLVNIPPAVSDSDSSLMEDISDLTSELSQAPPSHVPPPPLKGQRSPEDSQTDSP VETPQPRRRERSVNSRAIAEPESPGESRYDIYRVPSRQSLEDRGYSPDTRVVSFPKGASIGLRL AGGNDVGIFVSGVQAGSPADGQGIQEGDEILQVNGMPFRNLTREEAVQFLLGLPPGEDMELVTQ SKQDIFKKMVQSRVGDSFYIRTHFELEPSPPYGLGFTRGDVFHVVDTLYPGSGPGHGHSSHGGL WLAARMGRDLREQERGVIPNQSRAEQLASLEAAQRAAGVGPGASVGSNPRAEFWRLRGLRRGTK KASTQRSREDLSALTRQGHYPPYERVVLREASFKRPVVILGPVADIAMKKLTTEMPEEFEIAES MSRTDSPSKIIKLDTVRVIAERDKHALLDVTPSAIERLNYVQYYPIVIFCAPESRPALKALREW LAPASRRSSRRLYAQAQKLQKHSGHLFTATIPLHGTSDSWYQEVKAVIQQQQARPIWTAEDQLN SSSEDLDLPGHGLAASSGDLSCDSRTNSDYEDTDGEGAYTDREGGPQDVDEEVAPTALARSSEP VWVDDHQGLMGHGTTITDKWETQADSHYTQDQRRQDSMRTYKHEALRKKFTRARDVESSDDEGY DWGPATDL hide sequence

RefSeq Acc Id:	NP_001269024 ⟸ NM_001282095
- Peptide Label:	isoform 2
- UniProtKB:	Q921G9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEELTIWEQHTATLYKDPRRGFGIAVSGGHDRASGSVVVSDVVPGGPAEGRLRTGDHIVMVNGV SVENVTSAFAIQILKTCTKTANVTVKRPRRVQLPATKASPASGHQLSDQEEADHGRGYEGDSSS GSGRSWGERSRRSRAGRRGRVGSHGRRSSGGGSEANGLDLVSGYKRLPKQDVLMRPLKSVLVKR RNSEEFGVKLGSQIFIKHITESGLAARNHGLQEGDLILQINGVSSANLSLSDTRRLIEKSEGEL TLLVLRDSGQFLVNIPPAVSDSDSSLMEDISDLTSELSQAPPSHVPPPPLKGQRSPEDSQTDSP VETPQPRRRERSVNSRAIAEPESPGESRYDIYRVPSRQSLEDRGYSPDTRVVSFPKGASIGLRL AGGNDVGIFVSGVQAGSPADGQGIQEGDEILQVNGMPFRNLTREEAVQFLLGLPPGEDMELVTQ SKQDIFKKMVQSRVGDSFYIRTHFELEPSPPYGLGFTRGDVFHVVDTLYPGSGPGHGHSSHGGL WLAARMGRDLREQERGVIPNQSRAEQLASLEAAQRAAGVGPGASVGSNPRAEFWRLRGLRRGTK KASTQRSREDLSALTRQGHYPPYERVVLREASFKRPVVILGPVADIAMKKLTTEMPEEFEIAES MSRTDSPSKIIKLDTVRVIAERDKHALLDVTPSAIERLNYVQYYPIVIFCAPESRPALKALREW LAPASRRSSRRLYAQAQKLQKHSGHLFTATIPLHGTSDSWYQEVKAVIQQQQARPIWTAEDQLN SSSEDLDLPGHGLAASSGDLSCDSRTNSDYEDTDGEGAYTDREGGPQDVDEEVAPTALARSSEP VWVDDHQGLMGHGTTITDKWETQADSHYTQDQRRQDSMRTYKHEALRKKFTRARDVESSDDEGY DWGPATDL hide sequence

RefSeq Acc Id:	NP_001269025 ⟸ NM_001282096
- Peptide Label:	isoform 1
- UniProtKB:	Q921G9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAVRFQVADMEELTIWEQHTATLYKDPRRGFGIAVSGGHDRASGSVVVSDVVPGGPAEGRLRTG DHIVMVNGVSVENVTSAFAIQILKTCTKTANVTVKRPRRVQLPATKASPASGHQLSDQEEADHG RGYEGDSSSGSGRSWGERSRRSRAGRRGRVGSHGRRSSGGGSEANGLDLVSGYKRLPKQDVLMR PLKSVLVKRRNSEEFGVKLGSQIFIKHITESGLAARNHGLQEGDLILQINGVSSANLSLSDTRR LIEKSEGELTLLVLRDSGQFLVNIPPAVSDSDSSLMEDISDLTSELSQAPPSHVPPPPLKGQRS PEDSQTDSPVETPQPRRRERSVNSRAIAEPESPGESRYDIYRVPSRQSLEDRGYSPDTRVVSFP KGASIGLRLAGGNDVGIFVSGVQAGSPADGQGIQEGDEILQVNGMPFRNLTREEAVQFLLGLPP GEDMELVTQSKQDIFKKMVQSRVGDSFYIRTHFELEPSPPYGLGFTRGDVFHVVDTLYPGSGPG HGHSSHGGLWLAARMGRDLREQERGVIPNQSRAEQLASLEAAQRAAGVGPGASVGSNPRAEFWR LRGLRRGTKKASTQRSREDLSALTRQGHYPPYERVVLREASFKRPVVILGPVADIAMKKLTTEM PEEFEIAESMSRTDSPSKIIKLDTVRVIAERDKHALLDVTPSAIERLNYVQYYPIVIFCAPESR PALKALREWLAPASRRSSRRLYAQAQKLQKHSGHLFTATIPLHGTSDSWYQEVKAVIQQQQARP IWTAEDQLNSSSEDLDLPGHGLAASSGDLSCDSRTNSDYEDTDGEGAYTDREGGPQDVDEEVAP TALARSSEPVWVDDHQGLMGHGTTITDKWETQADSHYTQDQRRQDSMRTYKHEALRKKFTRARD VESSDDEGYDWGPATDL hide sequence

RefSeq Acc Id:	XP_006513771 ⟸ XM_006513708
- Peptide Label:	isoform X1
- UniProtKB:	Q921G9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEELTIWEQHTATLYKDPRRGFGIAVSGGHDRASGSVVVSDVVPGGPAEGRLRTGDHIVMVNGV SVENVTSAFAIQILKTCTKTANVTVKRPRRVQLPATKASPASGHQLSDQEEADHGRGYEGDSSS GSGRSWGERSRRSRAGRRGRVGSHGRRSSGGGSEANGLDLVSGYKRLPKQDVLMRPLKSVLVKR RNSEEFGVKLGSQIFIKHITESGLAARNHGLQEGDLILQINGVSSANLSLSDTRRLIEKSEGEL TLLVLRDSGQFLVNIPPAVSDSDSSLMEDISDLTSELSQAPPSHVPPPPLKGQRSPEDSQTDSP VETPQPRRRERSVNSRAIAEPESPGESRYDIYRVPSRQSLEDRGYSPDTRVVSFPKGASIGLRL AGGNDVGIFVSGVQAGSPADGQGIQEGDEILQVNGMPFRNLTREEAVQFLLGLPPGEDMELVTQ SKQDIFKKMVQSRVGDSFYIRTHFELEPSPPYGLGFTRGDVFHVVDTLYPGSGPGHGHSSHGGL WLAARMGRDLREQERGVIPNQSRAEQLASLEAAQRAAGVGPGASVGSNPRAEFWRLRGLRRGTK KASTQRSREDLSALTRQGHYPPYERVVLREASFKRPVVILGPVADIAMKKLTTEMPEEFEIAES MSRTDSPSKIIKLDTVRVIAERDKHALLDVTPSAIERLNYVQYYPIVIFCAPESRPALKALREW LAPASRRSSRRLYAQAQKLQKHSGHLFTATIPLHGTSDSWYQEVKAVIQQQQARPIWTAEDQLN SSSEDLDLPGHGLAASSGDLSCDSRTNSDYEDTDGEGAYTDREGGPQDVDEEVAPTALARSSEP VWVDDHQGLMGHGTTITDKWETQADSHYTQDQRRQDSMRTYKHEALRKKFTRARDVESSDDEGY DWGPATDL hide sequence

RefSeq Acc Id:

ENSMUSP00000151819 ⟸ ENSMUST00000218484

RefSeq Acc Id:

ENSMUSP00000036438 ⟸ ENSMUST00000045744

RefSeq Acc Id:

ENSMUSP00000151601 ⟸ ENSMUST00000219479

Protein Domains

Guanylate kinase-like PDZ SH3

Promoters

RGD ID:

6846793

Promoter ID:

MM_ACW:5435

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_0Hour, BoneMarrow_4Hour

Transcripts:

TJP3.DSEP07, TJP3.FSEP07-UNSPLICED

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	10	80,737,281 - 80,737,781 (-)	MPROMDB

RGD ID:

6846795

Promoter ID:

MM_ACW:5437

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

BoneMarrow_2Hour, BoneMarrow_4Hour, Kidney, Lung

Transcripts:

TJP3.CSEP07, TJP3.ISEP07

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	10	80,748,351 - 80,748,851 (-)	MPROMDB

RGD ID:

6820018

Promoter ID:

MM_KWN:4973

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Liver

Transcripts:

ENSMUST00000092280, NM_013769, UC007GHB.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	10	80,753,641 - 80,754,141 (-)	MPROMDB

RGD ID:

8672782

Promoter ID:

EPDNEW_M14422

Type:

initiation region

Name:

Tjp3_1

Description:

Mus musculus tight junction protein 3 , transcript variant 2,mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	10	81,291,269 - 81,291,329	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1351650	AgrOrtholog
Ensembl Genes	ENSMUSG00000034917	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSMUSP00000036438	ENTREZGENE, UniProtKB/TrEMBL
	ENSMUSP00000151601	ENTREZGENE, UniProtKB/TrEMBL
	ENSMUSP00000151819	UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000045744	ENTREZGENE, UniProtKB/TrEMBL
	ENSMUST00000218484	UniProtKB/TrEMBL
	ENSMUST00000219479	ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH	2.30.42.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	GK/Ca_channel_bsu	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Guanylate_kin-like_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	IPR005417	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PDZ	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PDZ_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH3-like_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH3_domain	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ZO-3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:27375	UniProtKB/TrEMBL
MGD	MGI:1351650	ENTREZGENE
NCBI Gene	27375	ENTREZGENE
PANTHER	PTHR13865:SF11	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Guanylate_kin	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PDZ	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH3_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Tjp3	PhenoGen
PRINTS	ZONOCCLUDNS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ZONOCCLUDNS3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	GUANYLATE_KINASE_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PDZ	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	GuKc	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PDZ	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF50044	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF50156	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF52540	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A1W2P7W7_MOUSE	UniProtKB/TrEMBL
	Q3UZ47	ENTREZGENE, UniProtKB/TrEMBL
	Q921G9	ENTREZGENE, UniProtKB/TrEMBL
	Q9QXY1	ENTREZGENE, UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD