Eif1b (eukaryotic translation initiation factor 1B)

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Gene: Eif1b (eukaryotic translation initiation factor 1B) Mus musculus

Analyze

Symbol:

Eif1b

Name:

eukaryotic translation initiation factor 1B

RGD ID:

1319472

MGI Page

MGI

Description:

Predicted to have ribosomal small subunit binding activity and translation initiation factor activity. Predicted to be involved in translational initiation. Predicted to localize to eukaryotic 43S preinitiation complex. Is expressed in cortical plate; embryo; olfactory cortex ventricular layer; telencephalon mantle layer; and telencephalon ventricular layer. Orthologous to human EIF1B (eukaryotic translation initiation factor 1B); INTERACTS WITH 17alpha-ethynylestradiol; 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Also known as:

1500010M16Rik; 3110001N14Rik; Gc20; translation factor sui1 homolog

RGD Orthologs

Human

Rat

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	EIF1B (eukaryotic translation initiation factor 1B)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Eif1b (eukaryotic translation initiation factor 1B)	HGNC	Treefam, OrthoMCL, NCBI, OMA, HomoloGene, Inparanoid, Panther, PhylomeDB, OrthoDB, Ensembl
Chinchilla lanigera (long-tailed chinchilla):	Eif1b (eukaryotic translation initiation factor 1B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	EIF1B (eukaryotic translation initiation factor 1B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	EIF1B (eukaryotic translation initiation factor 1B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Eif1b (eukaryotic translation initiation factor 1B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	EIF1B (eukaryotic translation initiation factor 1B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	EIF1B (eukaryotic translation initiation factor 1B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Eif1b (eukaryotic translation initiation factor 1B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	EIF1 (eukaryotic translation initiation factor 1)	HGNC	OrthoDB
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Eif1b (eukaryotic translation initiation factor 1B)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|TreeFam)
Homo sapiens (human):	EIF1B (eukaryotic translation initiation factor 1B)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)
Danio rerio (zebrafish):	zgc:56676	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)
Saccharomyces cerevisiae (baker's yeast):	SUI1	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)
Drosophila melanogaster (fruit fly):	eIF1	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)
Caenorhabditis elegans (roundworm):	eif-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|Roundup)

Latest Assembly:

GRCm38 - Mouse Genome Assembly GRCm38

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	120,321,672 - 120,324,393 (+)	NCBI	GRCm39		mm39
GRCm38	9	120,492,606 - 120,495,327 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	120,492,232 - 120,495,330 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	120,401,724 - 120,404,445 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	9	120,341,339 - 120,344,025 (+)	NCBI			mm8
Celera	9	120,962,066 - 120,964,791 (+)	NCBI		Celera
Cytogenetic Map	9	F4	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17alpha-ethynylestradiol (EXP)

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2-hydroxypropanoic acid (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

benzo[a]pyrene (EXP,ISO)

bisphenol A (ISO)

cadmium atom (ISO)

cerium trichloride (EXP)

chloropicrin (ISO)

cisplatin (ISO)

crocidolite asbestos (ISO)

doxorubicin (ISO)

elemental selenium (ISO)

fluoranthene (EXP)

nickel atom (ISO)

p-toluidine (ISO)

phenobarbital (ISO)

potassium chromate (EXP)

potassium dichromate (EXP)

rac-lactic acid (ISO)

selenium atom (ISO)

tamoxifen (EXP)

thalidomide (EXP)

titanium dioxide (EXP)

tunicamycin (ISO)

urethane (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

translation (IEA)

translational initiation (IEA)

Cellular Component

eukaryotic 43S preinitiation complex (IBA)

Molecular Function

protein binding (ISO)

ribosomal small subunit binding (IBA)

RNA binding (IBA)

translation initiation factor activity (IBA)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal circulating triglyceride level (IEA)

decreased circulating triglyceride level (IEA)

References

References - curated


1.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2.	MGD data from the GO Consortium
3.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4.	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:10725249	PMID:11042159	PMID:11076861	PMID:12477932	PMID:15489334	PMID:16141072	PMID:16141073	PMID:18055048	PMID:21267068	PMID:21873635
PMID:24194600	PMID:30196744	PMID:30680919	PMID:31097699

Genomics

Comparative Map Data

Eif1b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	120,321,672 - 120,324,393 (+)	NCBI	GRCm39		mm39
GRCm38	9	120,492,606 - 120,495,327 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	120,492,232 - 120,495,330 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	120,401,724 - 120,404,445 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	9	120,341,339 - 120,344,025 (+)	NCBI			mm8
Celera	9	120,962,066 - 120,964,791 (+)	NCBI		Celera
Cytogenetic Map	9	F4	NCBI

EIF1B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	3	40,309,707 - 40,312,424 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	3	40,309,707 - 40,312,424 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	3	40,351,173 - 40,353,915 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	40,326,177 - 40,328,919 (+)	NCBI	NCBI36		hg18	NCBI36
Celera	3	40,293,858 - 40,296,600 (+)	NCBI
Cytogenetic Map	3	p22.1	NCBI
HuRef	3	40,395,243 - 40,397,984 (+)	NCBI		HuRef
CHM1_1	3	40,301,070 - 40,303,813 (+)	NCBI		CHM1_1

Eif1b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rnor_6.0	8	129,158,112 - 129,160,726 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	129,158,103 - 129,160,757 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	128,356,696 - 128,359,310 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	125,499,378 - 125,501,992 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	8	125,519,015 - 125,521,753 (+)	NCBI
Celera	8	119,345,651 - 119,348,265 (+)	NCBI		Celera
Cytogenetic Map	8	q32	NCBI

Eif1b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955420	29,514,067 - 29,515,363 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955420	29,514,067 - 29,515,362 (-)	NCBI	ChiLan1.0	ChiLan1.0

EIF1B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	3	40,484,768 - 40,487,517 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	40,484,768 - 40,487,517 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	3	40,213,113 - 40,215,844 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

EIF1B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	23	9,798,232 - 9,800,700 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	23	9,798,141 - 9,800,976 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Eif1b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936473	29,290,460 - 29,292,968 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

EIF1B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	24,574,910 - 24,577,616 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	24,575,183 - 24,577,486 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	26,926,936 - 26,932,666 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

EIF1B
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	1,806,431 - 1,809,180 (+)	NCBI
ChlSab1.1 Ensembl	22	1,806,396 - 1,809,466 (+)	Ensembl

Eif1b
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624730	78,361,181 - 78,363,333 (-)	NCBI

QTLs in Region (GRCm38)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
11251716	Siim2_m	stress induced immobility 2 (mouse)					9	86748483	120748483	Mouse
12880422	V25Dq6_m	vitamin D inactive form serum level QTL 6 (mouse)					9	87800000	121800000	Mouse
10412242	Alpq8_m	alcohol preference QTL 8 (mouse)			Not determined		9	89284925	123284925	Mouse
1301649	Psl1_m	promotion susceptibility QTL 1 (mouse)			Not determined		9	89412277	123412396	Mouse
18182932	Metl3_m	metabolite locus 3, N-acetylglutamate (mouse)					9	89563342	123563342	Mouse
12910770	Splic1_m	spleen iron content 1 (mouse)					9	91413879	124595110	Mouse
12910772	Lvic6_m	liver iron content 6 (mouse)					9	91413879	124595110	Mouse
12910773	Splic3_m	spleen iron content 3 (mouse)					9	91413879	124595110	Mouse
1558767	Skmw11_m	skeletal muscle weight 11 (mouse)			Not determined		9	91641084	124595110	Mouse
13463474	Hbbcq5_m	hemoglobin concentration QTL 5 (mouse)					9	91641084	124595110	Mouse
13463475	Hctq7_m	hematocrit QTL 7 (mouse)					9	91641084	124595110	Mouse
13463477	Rbc9_m	red blood cell count 9 (mouse)					9	91641084	124595110	Mouse
13463478	Mchq18_m	mean corpuscular hemoglobin QTL 18 (mouse)					9	91641084	124595110	Mouse
13463480	Mchcq2_m	mean corpuscular hemoglobin concentration QTL 2 (mouse)					9	91641084	124595110	Mouse
12904937	Edlmmq9_m	extensor digitorum longus muscle mass QTL 9 (mouse)					9	91683173	124595110	Mouse
12904947	Tammq7_m	tibialis anterior muscle mass QTL 7 (mouse)					9	91683173	124595110	Mouse
12904961	Gmmq7_m	gastrocnemius muscle mass QTL 7 (mouse)					9	91683173	124595110	Mouse
1302001	Bdln5_m	body length 5 (mouse)			Not determined		9	93762590	124595110	Mouse
1301484	Bwq6_m	body weight (mouse)			Not determined		9	93762590	124595110	Mouse
14746992	Manh67_m	mandible shape 67 (mouse)					9	94036768	124595110	Mouse
11537364	Cnes5_m	C. neoformans susceptibility locus 5 (mouse)					9	96917590	124595110	Mouse
1301297	Lcho1_m	liver cholesterol 1 (mouse)			Not determined		9	101060861	124595110	Mouse
1357627	Tgq2_m	triglyceride QTL 2 (mouse)			Not determined		9	102000187	124595110	Mouse
1357648	Obq18_m	obesity QTL 18 (mouse)			Not determined		9	102000187	124595110	Mouse
1301789	Pbwg4_m	postnatal body weight growth 4 (mouse)			Not determined		9	103289445	124595110	Mouse
10412290	Pvacm1l_m	plasma vascular cell adhesion molecule 1 levels (mouse)			Not determined		9	103289445	124595110	Mouse
12879896	Berr3_m	berghei resistance locus 3 (mouse)					9	103289445	124595110	Mouse

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	115
Count of miRNA genes:	110
Interacting mature miRNAs:	114
Transcripts:	ENSMUST00000007139
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_026892	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC123708	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AI154212	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK005192	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK013965	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC030319	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC033505	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466587	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSMUST00000007139 ⟹ ENSMUSP00000007139

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	9	120,492,491 - 120,495,330 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000217553 ⟹ ENSMUSP00000149825

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	9	120,492,232 - 120,494,640 (+)	Ensembl

RefSeq Acc Id:

NM_026892 ⟹ NP_081168

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	9	120,321,672 - 120,324,393 (+)	NCBI
GRCm38	9	120,492,606 - 120,495,327 (+)	ENTREZGENE
MGSCv37	9	120,401,724 - 120,404,445 (+)	RGD
Celera	9	120,962,066 - 120,964,791 (+)	RGD
cM Map	9		ENTREZGENE

Sequence:

show sequence

AAATACGCGGCGCCGGCCATTTTGTGCGAGAAGCCGCAGCGCCGCCTCCCTGCTCGCGCCCCAC
CGCCGCCTCCGCGTCTTCCTGCGCCCCGGGCTTCCGCCGCTTCATTGATTTCCGTTTCTCGCCG
CTGCAGCCTCCTGACACGGTGATCCGGGCGGGCCCCGCGGGAATTCTATCCTCTCACCGGCCTC
ACACTAGTGTCGCATGTCCACTATCCAGAACCTCCAATCTTTCGACCCCTTTGCTGATGCAACT
AAGGGCGACGACTTACTCCCGGCAGGGACTGAGGACTACATTCATATAAGGATCCAGCAGCGCA
ACGGCAGGAAGACGCTGACCACTGTGCAGGGCATTGCGGACGATTATGACAAAAAGAAACTTGT
GAAAGCTTTCAAAAAGAAATTTGCCTGCAATGGAACTGTGATTGAACACCCTGAGTACGGAGAG
GTTATTCAGCTTCAAGGGGACCAAAGGAAGAACATCTGCCAGTTTCTTCTGGAGGTTGGCATCG
TCAAGGAGGAGCAGCTGAAGGTTCACGGGTTCTAAGATGAACCCAAGCGTGGCGAGTTTCTTAA
ATGGTTTTGTTCTCTAACTCAGTTTGGCTGCCTCGGGAGATGATTCTTTACAGTAAACGACAGA
CTTTGCGTTTATTTAATCATTCAGACTTCCACTCACACCTGCATGGCTACAGAAAACACGGGGT
ATGTAGGCTCCTGAGTCATAAGGAAATCGCGGTGAGATGGGAACGAAGCCCGAGTCCGTCCTAA
CATGTTTCCAATGGAAAAGGTTTTGTTGTGAGTGTTTGTTGTTAGTTTTATTTTCACTTGACTG
TTAAATGTTTTTGTTGTTGTATTAAACCATGTATGTTGCGGCTTAACAATAAAAAGAAAGTGTG
CATCCTTTATGAGCGCTGACC

hide sequence

Protein Sequences


Protein RefSeqs	NP_081168	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH30319	(Get FASTA)	NCBI Sequence Viewer
	AAH33505	(Get FASTA)	NCBI Sequence Viewer
	BAB23874	(Get FASTA)	NCBI Sequence Viewer
	BAB29089	(Get FASTA)	NCBI Sequence Viewer
	EDL09172	(Get FASTA)	NCBI Sequence Viewer
	EDL09173	(Get FASTA)	NCBI Sequence Viewer
	Q9CXU9	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	NP_081168 ⟸ NM_026892
- UniProtKB:	Q9CXU9 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MSTIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFK KKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF hide sequence

RefSeq Acc Id:

ENSMUSP00000007139 ⟸ ENSMUST00000007139

RefSeq Acc Id:

ENSMUSP00000149825 ⟸ ENSMUST00000217553

Protein Domains

SUI1

Promoters

RGD ID:

6844405

Promoter ID:

MM_KWN:59173

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day3, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6

Transcripts:

AK085969_D830035M03RIK, NM_026892

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	9	120,401,646 - 120,402,392 (-)	MPROMDB

RGD ID:

8671230

Promoter ID:

EPDNEW_M13646

Type:

initiation region

Name:

Eif1b_1

Description:

Mus musculus eukaryotic translation initiation factor 1B , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	9	120,492,633 - 120,492,693	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1916219	AgrOrtholog
Ensembl Genes	ENSMUSG00000006941	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein	ENSMUSP00000007139	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUSP00000149825	UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000007139	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUST00000217553	UniProtKB/TrEMBL
InterPro	SUI1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SUI1_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SUI1_euk	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:68969	UniProtKB/Swiss-Prot
MGD	MGI:1916219	ENTREZGENE
NCBI Gene	68969	ENTREZGENE
Pfam	SUI1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Eif1b	PhenoGen
PIRSF	SUI1_euk	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	SUI1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF55159	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGRFAMs	SUI1_MOF2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniGene	Mm.28753	ENTREZGENE
UniProt	A0A1L1SSA3_MOUSE	UniProtKB/TrEMBL
	EIF1B_MOUSE	UniProtKB/Swiss-Prot, ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)