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Gene: B4galt7 (beta-1,4-galactosyltransferase 7) Mus musculus

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Symbol:

B4galt7

Name:

beta-1,4-galactosyltransferase 7

RGD ID:

1319431

MGI Page

MGI

Description:

Enables xylosylprotein 4-beta-galactosyltransferase activity. Involved in glycosaminoglycan biosynthetic process. Predicted to be located in membrane. Predicted to be active in Golgi apparatus. Is expressed in several structures, including central nervous system and retina. Human ortholog(s) of this gene implicated in Ehlers-Danlos syndrome and Ehlers-Danlos syndrome spondylodysplastic type 1. Orthologous to human B4GALT7 (beta-1,4-galactosyltransferase 7).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

b4Gal-T7; beta-1,4-GalTase 7; beta4Gal-T7; MGC28643; proteoglycan UDP-galactose:beta-xylose beta1,4-galactosyltransferase I; UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 7; UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 7; UDP-galactose:beta-xylose beta-1,4-galactosyltransferase; XGalT-1; XGPT; xylosylprotein 4-beta-galactosyltransferase; xylosylprotein beta-1,4-galactosyltransferase; xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	B4GALT7 (beta-1,4-galactosyltransferase 7)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	B4galt7 (beta-1,4-galactosyltransferase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	B4galt7 (beta-1,4-galactosyltransferase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	B4GALT7 (beta-1,4-galactosyltransferase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	B4GALT7 (beta-1,4-galactosyltransferase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	B4galt7 (beta-1,4-galactosyltransferase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	B4GALT7 (beta-1,4-galactosyltransferase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	B4GALT7 (beta-1,4-galactosyltransferase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	B4galt7 (beta-1,4-galactosyltransferase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	B4galt7 (beta-1,4-galactosyltransferase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	B4galt7 (beta-1,4-galactosyltransferase 7)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	B4GALT7 (beta-1,4-galactosyltransferase 7)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	b4galt7 (xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I))	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Drosophila melanogaster (fruit fly):	beta4GalT7	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	sqv-3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	b4galt7	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	b4galt7	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	55,747,709 - 55,758,258 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	55,747,709 - 55,758,256 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	13	55,599,896 - 55,610,443 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	55,599,896 - 55,610,443 (+)	Ensembl			mm10	GRCm38
MGSCv37	13	55,701,472 - 55,711,315 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	13	55,609,733 - 55,619,576 (+)	NCBI		MGSCv36	mm8
Celera	13	56,654,193 - 56,664,036 (+)	NCBI		Celera
Cytogenetic Map	13	B1	NCBI
cM Map	13	30.06	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Bone Fragility with Contractures, Arterial Rupture, and Deafness (ISO)

Craniofacial Abnormalities (ISO)

Desbuquois dysplasia (ISO)

Ehlers-Danlos syndrome (ISO)

Ehlers-Danlos syndrome spondylodysplastic type 1 (ISO)

Ehlers-Danlos syndrome spondylodysplastic type 2 (ISO)

genetic disease (ISO)

Larsen syndrome (ISO)

Larsen-like syndrome B3GAT3 type (ISO)

osteoporosis-pseudoglioma syndrome (ISO)

Torrance type platyspondylic dysplasia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (EXP)

1,2-dichloroethane (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

3,3',5,5'-tetrabromobisphenol A (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

acrolein (ISO)

acrylamide (ISO)

aflatoxin B1 (EXP)

alpha-pinene (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbamazepine (ISO)

cobalt dichloride (ISO)

cyclosporin A (ISO)

cytarabine (ISO)

dexamethasone (ISO)

doxorubicin (ISO)

ethanol (EXP)

gentamycin (ISO)

GSK-J4 (ISO)

hydrogen peroxide (ISO)

indometacin (ISO)

inulin (EXP)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

ochratoxin A (ISO)

ozone (ISO)

paracetamol (ISO)

perfluorooctane-1-sulfonic acid (EXP)

phenytoin (ISO)

resveratrol (ISO)

sodium arsenite (ISO)

tetrachloromethane (EXP)

theophylline (ISO)

thioacetamide (ISO)

thiram (ISO)

valproic acid (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

carbohydrate metabolic process (IEA)

glycosaminoglycan biosynthetic process (IEA,IMP,ISO,ISS)

negative regulation of fibroblast proliferation (IEA,ISO,ISS)

protein N-linked glycosylation (IEA,ISO,ISS)

proteoglycan biosynthetic process (IBA)

proteoglycan metabolic process (IEA,ISO,ISS)

supramolecular fiber organization (IEA,ISO,ISS)

Cellular Component

Golgi apparatus (IBA,IEA,ISO,ISS)

Golgi cisterna membrane (IEA)

membrane (IEA,ISO,ISS)

Molecular Function

beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (IEA,ISO)

galactosyltransferase activity (IEA,ISO,ISS)

glycosyltransferase activity (IEA)

manganese ion binding (IEA,ISO,ISS)

metal ion binding (IEA)

protein binding (ISO)

transferase activity (IEA)

xylosylprotein 4-beta-galactosyltransferase activity (IBA,IEA,IMP,ISO,ISS)

Molecular Pathway Annotations Click to see Annotation Detail View

chondroitin sulfate biosynthetic pathway (IEA)

heparan sulfate biosynthetic pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Cloning and expression of a proteoglycan UDP-galactose:beta-xylose beta1,4-galactosyltransferase I. A seventh member of the human beta4-galactosyltransferase gene family.	Almeida R, etal., J Biol Chem. 1999 Sep 10;274(37):26165-71.
2.	MGDs mouse GO annotations	MGD data from the GO Consortium
3.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
4.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851	PMID:12477932	PMID:14681479	PMID:15226823	PMID:15282149	PMID:15489334	PMID:16141072
PMID:16141073	PMID:16602821	PMID:20809901	PMID:21267068	PMID:21677750	PMID:21873635	PMID:32554809	PMID:33208938	PMID:34533190

Genomics

Comparative Map Data

B4galt7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	55,747,709 - 55,758,258 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	55,747,709 - 55,758,256 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	13	55,599,896 - 55,610,443 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	55,599,896 - 55,610,443 (+)	Ensembl			mm10	GRCm38
MGSCv37	13	55,701,472 - 55,711,315 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	13	55,609,733 - 55,619,576 (+)	NCBI		MGSCv36	mm8
Celera	13	56,654,193 - 56,664,036 (+)	NCBI		Celera
Cytogenetic Map	13	B1	NCBI
cM Map	13	30.06	NCBI

B4GALT7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	177,600,132 - 177,610,330 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	177,600,114 - 177,611,056 (+)	Ensembl			hg38	GRCh38
GRCh37	5	177,027,133 - 177,037,331 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	176,959,778 - 176,969,937 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	5	176,959,777 - 176,969,936	NCBI
Celera	5	171,465,093 - 171,475,318 (-)	NCBI		Celera
Cytogenetic Map	5	q35.3	NCBI
HuRef	5	171,950,894 - 171,957,065 (+)	NCBI		HuRef
CHM1_1	5	176,459,506 - 176,469,735 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	178,142,412 - 178,152,606 (+)	NCBI		T2T-CHM13v2.0

B4galt7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	9,023,667 - 9,032,742 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	9,023,618 - 9,032,745 (-)	Ensembl				GRCr8
mRatBN7.2	17	9,018,514 - 9,027,591 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	9,018,935 - 9,027,573 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	17	9,034,025 - 9,042,619 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	10,564,039 - 10,572,472 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	9,030,417 - 9,039,008 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	9,549,605 - 9,558,672 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	9,550,028 - 9,558,634 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	11,657,450 - 11,666,049 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	15,059,958 - 15,068,556 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	9,100,550 - 9,109,148 (-)	NCBI		Celera
RGSC_v3.1	17	15,060,083 - 15,068,555 (-)	NCBI
Cytogenetic Map	17	p14	NCBI

B4galt7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955408	29,838,075 - 29,849,357 (+)	Ensembl
ChiLan1.0	NW_004955408	29,837,982 - 29,847,891 (+)	NCBI	ChiLan1.0	ChiLan1.0

B4GALT7
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	172,688,363 - 172,698,610 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	170,827,913 - 170,838,072 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	172,905,749 - 172,915,970 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	179,965,928 - 179,976,159 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	179,965,928 - 179,976,158 (+)	Ensembl			panPan2	panpan1.1

B4GALT7
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	3,497,860 - 3,507,513 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	3,498,153 - 3,505,034 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	3,640,557 - 3,649,718 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	3,473,619 - 3,482,780 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	3,470,164 - 3,483,028 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	3,441,378 - 3,450,306 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	3,520,034 - 3,528,963 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	3,763,759 - 3,772,921 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

B4galt7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	122,865,812 - 122,880,135 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936597	1,890,473 - 1,902,259 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936597	1,890,737 - 1,900,702 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

B4GALT7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	80,346,307 - 80,359,973 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	2	80,349,732 - 80,359,878 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	81,927,404 - 81,937,550 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

B4GALT7
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	79,617,929 - 79,628,265 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	79,617,963 - 79,628,377 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666075	10,810,860 - 10,821,201 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

B4galt7
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624733	12,438,287 - 12,455,896 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

B4galt7
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	14	73,919,033 - 73,927,609 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in B4galt7
230 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	1217
Count of miRNA genes:	466
Interacting mature miRNAs:	556
Transcripts:	ENSMUST00000064701, ENSMUST00000100764, ENSMUST00000133176, ENSMUST00000142654
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300561	Heal7_m	wound healing/regeneration 7 (mouse)			Not determined		13	36144820	70144904	Mouse
1301015	Sysbp2_m	systolic blood pressure 2 (mouse)			Not determined		13	20477612	59821605	Mouse
4142331	Bxs6_m	BXSB/MpJ autoimmune nephritis 6 (mouse)			Not determined			45210442	83744746	Mouse
12738439	Twq4_m	testis weight QTL 4 (mouse)					13	31129110	65129110	Mouse
4142009	Pregq3_m	pregnancy QTL 3 (mouse)			Not determined		13	20615512	72385189	Mouse
1357587	Pfat3_m	predicted fat percentage 3 (mouse)			Not determined		13	36101530	70101640	Mouse
10401111	Pgia40_m	proteoglycan induced arthritis 40 (mouse)			Not determined		13	27918469	61918560	Mouse
1300573	Elsgp2_m	elevated serum gp70 2 (mouse)			Not determined		13	50616828	84617027	Mouse
10412109	Bxs7_m	BXSB/MpJ autoimmune nephritis 7 (mouse)			Not determined		13	45210442	83744746	Mouse
10412235	Scgq5_m	spontaneous crescentic glomerulonephritis QTL 5 (mouse)			Not determined		13	36060908	96239162	Mouse
4142314	Tailaq3_m	tail length adjusted QTL 3 (mouse)			Not determined			55720354	112431103	Mouse
4141992	W6q16_m	weight 6 weeks QTL 16 (mouse)			Not determined			55720354	112431103	Mouse
10755517	Chol15_m	cholesterol 15 (mouse)					13	30969467	64969467	Mouse
4142372	Moo2_m	modifier of Odc2 (mouse)			Not determined		X	50318411	84318559	Mouse
15039353	Nmrs35_m	NAFLD-associated magnetic resonance shift 35 (mouse)					13	40588253	74588253	Mouse
1302157	Bwem2_m	body weight day 30 males 2 (mouse)			Not determined		13	39629249	73629397	Mouse
4142241	Tailq3_m	tail length QTL 3 (mouse)			Not determined			55720354	112431103	Mouse
1301299	Sluc23_m	susceptibility to lung cancer 23 (mouse)			Not determined		13	34921943	68922081	Mouse
4140959	W10q17_m	weight 10 weeks QTL 17 (mouse)			Not determined			55720354	112431103	Mouse
4142489	Ath25_m	atherosclerosis 25 (mouse)			Not determined			25836529	59836529	Mouse
10755533	Chol18_m	cholesterol 18 (mouse)					13	30969467	64969467	Mouse
1300985	Bmd13_m	bone mineral density 13 (mouse)			Not determined		13	39629249	73629397	Mouse
1302073	Pgct1_m	primordial germ cell tumor locus 1 (mouse)			Not determined		13	53820783	87820897	Mouse
10045621	Heal21_m	wound healing/regeneration 21 (mouse)			Not determined		13	28217379	62217515	Mouse
1300862	Cfbw5_m	cystic fibrosis body weight 5 (mouse)			Not determined		13	38720358	72720517	Mouse
1300668	Pas10_m	pulmonary adenoma susceptibility 10 (mouse)			Not determined		13	41489042	75489158	Mouse
1357563	Bmch6_m	bone mechanical trait 6 (mouse)			Not determined		13	55384980	89385140	Mouse
1301666	Eae13_m	susceptibility to experimental allergic encephalomyelitis 13 (mouse)			Not determined		13	50318411	84318559	Mouse
26884393	Humsd7_m	humerus midshaft diameter 7, 16 week (mouse)					13	3950000	76048119	Mouse
1300710	Pcd4ts2_m	p-glycoprotein positive CD4 T cell subset 2 (mouse)			Not determined		13	28210442	62210544	Mouse
1301734	Acsns2_m	Angiostrongylus costaricensis nematode susceptibility 2 (mouse)			Not determined		13	36101530	70101640	Mouse
26884396	Humsd4_m	humerus midshaft diameter 4, 10 week (mouse)					13	47853476	73148119	Mouse
14696729	Kidlq2_m	kidney weight, left QTL 2 (mouse)					13	31344736	65344736	Mouse
1301801	Cpfd5_m	cerebellum pattern fissures (mouse)			Not determined		13	39629249	73629397	Mouse
4142147	Mvwf4_m	modifier of von Willebrand factor 4 (mouse)			Not determined			20477612	112898424	Mouse
1357802	Vtbt15_m	vertebral trabecular bone trait 15 (mouse)			Not determined		13	28217379	62217515	Mouse
14746975	Manh74_m	mandible shape 74 (mouse)					13	52477269	86477269	Mouse

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001311137	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_146045	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036157995	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036157996	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC126408	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK050684	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK141739	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK146855	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK171600	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC027195	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC055703	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BF455923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466546	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000064701 ⟹ ENSMUSP00000068532

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	13	55,747,878 - 55,758,255 (+)	Ensembl
GRCm38.p6 Ensembl	13	55,600,065 - 55,610,442 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000100764 ⟹ ENSMUSP00000098327

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	13	55,747,709 - 55,758,256 (+)	Ensembl
GRCm38.p6 Ensembl	13	55,599,896 - 55,610,443 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000133176 ⟹ ENSMUSP00000123292

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	13	55,747,878 - 55,756,615 (+)	Ensembl
GRCm38.p6 Ensembl	13	55,600,065 - 55,608,802 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000142654

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	13	55,747,878 - 55,755,831 (+)	Ensembl
GRCm38.p6 Ensembl	13	55,600,065 - 55,608,018 (+)	Ensembl

RefSeq Acc Id:

NM_001311137 ⟹ NP_001298066

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	13	55,747,709 - 55,758,256 (+)	NCBI
GRCm38	13	55,599,896 - 55,610,443 (+)	NCBI

Sequence:

show sequence

AGGGAACTCCCTTTCTTGTGACATCCAGTGGGCCCTTGTATGTAGTGAGAACCTAGCTAGGTCC
CGCCATCGGTTCTCCAGACAGCAGAACCTTATAAGCTGTGGCTCTGAGGTGCAGCCGGCCCAAC
CGGAGGGACGGACTCGGCGGACCGGGGGGCGGGGCGGGGGCGGAGACGCCGCGTAGGCTGGGCA
GGCCGGGCAGCGGGGCTTTGAGCCAGAGCCCCATGTCCTGCTGTGTCCCGCCACGATGTTGCCC
TCCCGGAGGAAAGCGGCGCAGCTGCCCTGGGAGGATGGCAGGGCCAGGTTGCTTCCTGGAGGCC
TCCGCCGGAAATGCTCCATCTTCCACCTCTTCATTGCCTTTCTCCTGTTGGTCTTCTTCTCCCT
GCTCTGGCTGCAGCTCAGCTGTTCTGGAGATATGGCCCAGGTGACCAGGGGACAAGGGCAAGAG
ACCTCGGGTCCACCCCGGGCTTGCCCTCCAGAGCCGCCCCCTGAGCACTGGGAAGAAGATGAGT
CCTGGGGGCCCCACCGCTTGGCAGTGCTGGTGCCCTTTCGTGAGCGCTTTGAGGAGCTGCTGGT
CTTTGTGCCCCACATGCACCGCTTCCTAAGCAGGAAGAGGATCCAGCACCACATCTATGTGCTC
AACCAGGTGGACCATTTCAGGTTCAATCGGGCAGCACTCATCAATGTGGGCTTCCTGGAGAGCA
GCAACAGCACAGACTACATCGCCATGCACGATGTGGACCTGCTCCCTCTCAATGAGGAGCTGGA
CTATGGCTTCCCGGAGGCTGGGCCCTTCCATGTGGCCTCCCCAGAGCTCCACCCTCTCTACCAC
TACAAGACCTATGTGGGCGGCATTCTGCTGCTGTCCAAACAGCACTACCAGCTGTGCAACGGAA
TGTCCAACCGCTTTTGGGGCTGGGGCCGAGAGGATGATGAATTCTACCGGCGCATCAAAGGAGC
TGGCCTCCAGGAACAGTTCAAGGTGGACCGGGAGGGAGGCCTGAACACTGTGAAGTACCGGGTG
GATTCCCGCACGGCACTGTCTATAGGAGGGGCCCCGTGCACTGTCCTCAATGTCATGCTGGACT
GCGATAAAACAGCCACCCCATGGTGCATATTTGGCTGACAGCTAAACTGTAAGGAAGCTTCCAG
ACCTCAGTGCTGCTCAGGCTCAGGAAACCTCAGGCCTTTGGCCCAGCTCAGGAGGATGCAGAGA
GGCCTGAAGGAGTTGCCAGCCCATCGGCGTCTTCAGCAACCTGGCCCCCAGAGCCAGGCCCAAG
ACAGAACACAGGTAGACCCTGGGATGCTGCTGAAGGTATGGCTCTTGACTGACCTTCTCCTCCT
GGCCTCCTGCCTGCCCTGCTCTGCCTGCCCTGCTGTGTGTGCTGAGGCCTGAGGCAGTGAGAAG
GTGGCCAGGACGGCCTCAGCAGGGACATACTGCTCCGCTGCTCCTCTGGAAGAACAGACTCACA
AAGATGTAGTCAGAAGTCATGTGACCAGTGTGTACAGCCGCTGCTACTAGGAGGCTTAGGACAT
CAGAAGGCAGAACACAAGCCCGGGTGAAGGAGCGGCTGATATAGCTGTAATTGGTGCCACCACA
GCAAAACCGGAGGAACCAGGGCACAAGATCTCAATTTTCAAAAGAAACTAGAATGCTGGATTCT
TTTCTTTTTTTTTTTTTTTTAAAGATTTATTATTATGTATGAGTACGCTGTAGCTGTCTTCAGA
CACACCAGAAGAGGGCATCAGATCTCATTGCAGATGGTTGTGAGCCACCATGTGGTTGCTGGGA
TTTGAACTCGGGACCCTTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCC
TGAATGCTGGATTCTTAAGCAGAATTTTTTCTTTTGTTTTTTTAAATGGCAGCAGTTAACTAAA
GCTTTGAAAATCTGTGGCAGGCCAAACAAAATATGTTTTTTTGTTTGTTTGTTTTTTGAGACAG
GGTTTCTCTGATAGCTCTGGCTGTCTTGGAACTCACTTTGTAGATCAGGCTGGCCTCGAACTCA
GAAATTCGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGTGCCACCACCTCCTAGCT
CAAACAAAATGTTTTATGGTTCACTGGTTTGTCACCTTTGGTTGACCAAAGGGGGATGAAATAA
AAGACGATGCTCTCAGTTAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_146045 ⟹ NP_666157

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	13	55,747,709 - 55,758,256 (+)	NCBI
GRCm38	13	55,599,896 - 55,610,443 (+)	NCBI
MGSCv37	13	55,701,472 - 55,711,315 (+)	RGD
Celera	13	56,654,193 - 56,664,036 (+)	RGD
cM Map	13		ENTREZGENE

Sequence:

show sequence

AGGGAACTCCCTTTCTTGTGACATCCAGTGGGCCCTTGTATGTAGTGAGAACCTAGCTAGGTCC
CGCCATCGGTTCTCCAGACAGCAGAACCTTATAAGCTGTGGCTCTGAGGTGCAGCCGGCCCAAC
CGGAGGGACGGACTCGGCGGACCGGGGGGCGGGGCGGGGGCGGAGACGCCGCGTAGGCTGGGCA
GGCCGGGCAGCGGGGCTTTGAGCCAGAGCCCCATGTCCTGCTGTGTCCCGCCACGATGTTGCCC
TCCCGGAGGAAAGCGGCGCAGCTGCCCTGGGAGGATGGCAGGGCCAGGTTGCTTCCTGGAGGCC
TCCGCCGGAAATGCTCCATCTTCCACCTCTTCATTGCCTTTCTCCTGTTGGTCTTCTTCTCCCT
GCTCTGGCTGCAGCTCAGCTGTTCTGGAGATATGGCCCAGGTGACCAGGGGACAAGGGCAAGAG
ACCTCGGGTCCACCCCGGGCTTGCCCTCCAGAGCCGCCCCCTGAGCACTGGGAAGAAGATGAGT
CCTGGGGGCCCCACCGCTTGGCAGTGCTGGTGCCCTTTCGTGAGCGCTTTGAGGAGCTGCTGGT
CTTTGTGCCCCACATGCACCGCTTCCTAAGCAGGAAGAGGATCCAGCACCACATCTATGTGCTC
AACCAGGTGGACCATTTCAGGTTCAATCGGGCAGCACTCATCAATGTGGGCTTCCTGGAGAGCA
GCAACAGCACAGACTACATCGCCATGCACGATGTGGACCTGCTCCCTCTCAATGAGGAGCTGGA
CTATGGCTTCCCGGAGGCTGGGCCCTTCCATGTGGCCTCCCCAGAGCTCCACCCTCTCTACCAC
TACAAGACCTATGTGGGCGGCATTCTGCTGCTGTCCAAACAGCACTACCAGCTGTGCAACGGAA
TGTCCAACCGCTTTTGGGGCTGGGGCCGAGAGGATGATGAATTCTACCGGCGCATCAAAGGAGC
TGGCCTCCAGCTTTTCCGCCCCTCGGGAATCACAACTGGGTACCAGACATTTCGCCACTTGCAT
GACCCTGCCTGGCGGAAGAGGGACCAAAAACGCATTGCGGCTCAAAAACAGGAACAGTTCAAGG
TGGACCGGGAGGGAGGCCTGAACACTGTGAAGTACCGGGTGGATTCCCGCACGGCACTGTCTAT
AGGAGGGGCCCCGTGCACTGTCCTCAATGTCATGCTGGACTGCGATAAAACAGCCACCCCATGG
TGCATATTTGGCTGACAGCTAAACTGTAAGGAAGCTTCCAGACCTCAGTGCTGCTCAGGCTCAG
GAAACCTCAGGCCTTTGGCCCAGCTCAGGAGGATGCAGAGAGGCCTGAAGGAGTTGCCAGCCCA
TCGGCGTCTTCAGCAACCTGGCCCCCAGAGCCAGGCCCAAGACAGAACACAGGTAGACCCTGGG
ATGCTGCTGAAGGTATGGCTCTTGACTGACCTTCTCCTCCTGGCCTCCTGCCTGCCCTGCTCTG
CCTGCCCTGCTGTGTGTGCTGAGGCCTGAGGCAGTGAGAAGGTGGCCAGGACGGCCTCAGCAGG
GACATACTGCTCCGCTGCTCCTCTGGAAGAACAGACTCACAAAGATGTAGTCAGAAGTCATGTG
ACCAGTGTGTACAGCCGCTGCTACTAGGAGGCTTAGGACATCAGAAGGCAGAACACAAGCCCGG
GTGAAGGAGCGGCTGATATAGCTGTAATTGGTGCCACCACAGCAAAACCGGAGGAACCAGGGCA
CAAGATCTCAATTTTCAAAAGAAACTAGAATGCTGGATTCTTTTCTTTTTTTTTTTTTTTTAAA
GATTTATTATTATGTATGAGTACGCTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGAT
CTCATTGCAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCGGGACCCTTGGAAG
AGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTGAATGCTGGATTCTTAAGCAGA
ATTTTTTCTTTTGTTTTTTTAAATGGCAGCAGTTAACTAAAGCTTTGAAAATCTGTGGCAGGCC
AAACAAAATATGTTTTTTTGTTTGTTTGTTTTTTGAGACAGGGTTTCTCTGATAGCTCTGGCTG
TCTTGGAACTCACTTTGTAGATCAGGCTGGCCTCGAACTCAGAAATTCGCCTGCCTCTGCCTCC
CAAGTGCTGGGATTAAAGGCGTGTGCCACCACCTCCTAGCTCAAACAAAATGTTTTATGGTTCA
CTGGTTTGTCACCTTTGGTTGACCAAAGGGGGATGAAATAAAAGACGATGCTCTCAGTTAAAAA
AAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_036157995 ⟹ XP_036013888

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	13	55,747,848 - 55,758,258 (+)	NCBI

Sequence:

show sequence

ACTCGGCGGACCGGGGGGCGGGGCGGGGGCGGAGACGCCGCGTAGGCTGGGCAGGCCGGGCAGC
GGGGCTTTGAGCCAGAGCCCCATGTCCTGCTGTGTCCCGCCACGATGTTGCCCTCCCGGAGGAA
AGCGGCGCAGCTGCCCTGGGAGGATGGCAGCTCAGCTGTTCTGGAGATATGGCCCAGGTGACCA
GGGGACAAGGGCAAGAGACCTCGGGTCCACCCCGGGCTTGCCCTCCAGAGCCGCCCCCTGAGCA
CTGGGAAGAAGATGAGTCCTGGGGGCCCCACCGCTTGGCAGTGCTGGTGCCCTTTCGTGAGCGC
TTTGAGGAGCTGCTGGTCTTTGTGCCCCACATGCACCGCTTCCTAAGCAGGAAGAGGATCCAGC
ACCACATCTATGTGCTCAACCAGGTGGACCATTTCAGGTTCAATCGGGCAGCACTCATCAATGT
GGGCTTCCTGGAGAGCAGCAACAGCACAGACTACATCGCCATGCACGATGTGGACCTGCTCCCT
CTCAATGAGGAGCTGGACTATGGCTTCCCGGAGGCTGGGCCCTTCCATGTGGCCTCCCCAGAGC
TCCACCCTCTCTACCACTACAAGACCTATGTGGGCGGCATTCTGCTGCTGTCCAAACAGCACTA
CCAGCTGTGCAACGGAATGTCCAACCGCTTTTGGGGCTGGGGCCGAGAGGATGATGAATTCTAC
CGGCGCATCAAAGGAGCTGGCCTCCAGCTTTTCCGCCCCTCGGGAATCACAACTGGGTACCAGA
CATTTCGCCACTTGCATGACCCTGCCTGGCGGAAGAGGGACCAAAAACGCATTGCGGCTCAAAA
ACAGGAACAGTTCAAGGTGGACCGGGAGGGAGGCCTGAACACTGTGAAGTACCGGGTGGATTCC
CGCACGGCACTGTCTATAGGAGGGGCCCCGTGCACTGTCCTCAATGTCATGCTGGACTGCGATA
AAACAGCCACCCCATGGTGCATATTTGGCTGACAGCTAAACTGTAAGGAAGCTTCCAGACCTCA
GTGCTGCTCAGGCTCAGGAAACCTCAGGCCTTTGGCCCAGCTCAGGAGGATGCAGAGAGGCCTG
AAGGAGTTGCCAGCCCATCGGCGTCTTCAGCAACCTGGCCCCCAGAGCCAGGCCCAAGACAGAA
CACAGGTAGACCCTGGGATGCTGCTGAAGGTATGGCTCTTGACTGACCTTCTCCTCCTGGCCTC
CTGCCTGCCCTGCTCTGCCTGCCCTGCTGTGTGTGCTGAGGCCTGAGGCAGTGAGAAGGTGGCC
AGGACGGCCTCAGCAGGGACATACTGCTCCGCTGCTCCTCTGGAAGAACAGACTCACAAAGATG
TAGTCAGAAGTCATGTGACCAGTGTGTACAGCCGCTGCTACTAGGAGGCTTAGGACATCAGAAG
GCAGAACACAAGCCCGGGTGAAGGAGCGGCTGATATAGCTGTAATTGGTGCCACCACAGCAAAA
CCGGAGGAACCAGGGCACAAGATCTCAATTTTCAAAAGAAACTAGAATGCTGGATTCTTTTCTT
TTTTTTTTTTTTTTAAAGATTTATTATTATGTATGAGTACGCTGTAGCTGTCTTCAGACACACC
AGAAGAGGGCATCAGATCTCATTGCAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAA
CTCGGGACCCTTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTGAATG
CTGGATTCTTAAGCAGAATTTTTTCTTTTGTTTTTTTAAATGGCAGCAGTTAACTAAAGCTTTG
AAAATCTGTGGCAGGCCAAACAAAATATGTTTTTTTGTTTGTTTGTTTTTTGAGACAGGGTTTC
TCTGATAGCTCTGGCTGTCTTGGAACTCACTTTGTAGATCAGGCTGGCCTCGAACTCAGAAATT
CGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGTGCCACCACCTCCTAGCTCAAACA
AAATGTTTTATGGTTCACTGGTTTGTCACCTTTGGTTGACCAAAGGGGGATGAAATAAAAGACG
ATGCTCTCAGTTATA

hide sequence

RefSeq Acc Id:

XM_036157996 ⟹ XP_036013889

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	13	55,747,860 - 55,758,258 (+)	NCBI

Sequence:

show sequence

GGGGGGCGGGGCGGGGGCGGAGACGCCGCGTAGGCTGGGCAGGCCGGGCAGCGGGGCTTTGAGC
CAGAGCCCCATGTCCTGCTGTGTCCCGCCACGATGTTGCCCTCCCGGAGGAAAGCGGCGCAGCT
GCCCTGGGAGGATGGCAGCTCAGCTGTTCTGGAGATATGGCCCAGGTGACCAGGGGACAAGGGC
AAGAGACCTCGGGTCCACCCCGGGCTTGCCCTCCAGAGCCGCCCCCTGAGCACTGGGAAGAAGA
TGAGTCCTGGGGGCCCCACCGCTTGGCAGTGCTGGTGCCCTTTCGTGAGCGCTTTGAGGAGCTG
CTGGTCTTTGTGCCCCACATGCACCGCTTCCTAAGCAGGAAGAGGATCCAGCACCACATCTATG
TGCTCAACCAGGTGGACCATTTCAGGTTCAATCGGGCAGCACTCATCAATGTGGGCTTCCTGGA
GAGCAGCAACAGCACAGACTACATCGCCATGCACGATGTGGACCTGCTCCCTCTCAATGAGGAG
CTGGACTATGGCTTCCCGGAGGCTGGGCCCTTCCATGTGGCCTCCCCAGAGCTCCACCCTCTCT
ACCACTACAAGACCTATGTGGGCGGCATTCTGCTGCTGTCCAAACAGCACTACCAGCTGTGCAA
CGGAATGTCCAACCGCTTTTGGGGCTGGGGCCGAGAGGATGATGAATTCTACCGGCGCATCAAA
GGAGCTGGCCTCCAGGAACAGTTCAAGGTGGACCGGGAGGGAGGCCTGAACACTGTGAAGTACC
GGGTGGATTCCCGCACGGCACTGTCTATAGGAGGGGCCCCGTGCACTGTCCTCAATGTCATGCT
GGACTGCGATAAAACAGCCACCCCATGGTGCATATTTGGCTGACAGCTAAACTGTAAGGAAGCT
TCCAGACCTCAGTGCTGCTCAGGCTCAGGAAACCTCAGGCCTTTGGCCCAGCTCAGGAGGATGC
AGAGAGGCCTGAAGGAGTTGCCAGCCCATCGGCGTCTTCAGCAACCTGGCCCCCAGAGCCAGGC
CCAAGACAGAACACAGGTAGACCCTGGGATGCTGCTGAAGGTATGGCTCTTGACTGACCTTCTC
CTCCTGGCCTCCTGCCTGCCCTGCTCTGCCTGCCCTGCTGTGTGTGCTGAGGCCTGAGGCAGTG
AGAAGGTGGCCAGGACGGCCTCAGCAGGGACATACTGCTCCGCTGCTCCTCTGGAAGAACAGAC
TCACAAAGATGTAGTCAGAAGTCATGTGACCAGTGTGTACAGCCGCTGCTACTAGGAGGCTTAG
GACATCAGAAGGCAGAACACAAGCCCGGGTGAAGGAGCGGCTGATATAGCTGTAATTGGTGCCA
CCACAGCAAAACCGGAGGAACCAGGGCACAAGATCTCAATTTTCAAAAGAAACTAGAATGCTGG
ATTCTTTTCTTTTTTTTTTTTTTTTAAAGATTTATTATTATGTATGAGTACGCTGTAGCTGTCT
TCAGACACACCAGAAGAGGGCATCAGATCTCATTGCAGATGGTTGTGAGCCACCATGTGGTTGC
TGGGATTTGAACTCGGGACCCTTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCC
AGCCCTGAATGCTGGATTCTTAAGCAGAATTTTTTCTTTTGTTTTTTTAAATGGCAGCAGTTAA
CTAAAGCTTTGAAAATCTGTGGCAGGCCAAACAAAATATGTTTTTTTGTTTGTTTGTTTTTTGA
GACAGGGTTTCTCTGATAGCTCTGGCTGTCTTGGAACTCACTTTGTAGATCAGGCTGGCCTCGA
ACTCAGAAATTCGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGTGCCACCACCTCC
TAGCTCAAACAAAATGTTTTATGGTTCACTGGTTTGTCACCTTTGGTTGACCAAAGGGGGATGA
AATAAAAGACGATGCTCTCAGTTATA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001298066	(Get FASTA)	NCBI Sequence Viewer
	NP_666157	(Get FASTA)	NCBI Sequence Viewer
	XP_036013888	(Get FASTA)	NCBI Sequence Viewer
	XP_036013889	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH27195	(Get FASTA)	NCBI Sequence Viewer
	AAH55703	(Get FASTA)	NCBI Sequence Viewer
	BAE24815	(Get FASTA)	NCBI Sequence Viewer
	BAE27484	(Get FASTA)	NCBI Sequence Viewer
	BAE42555	(Get FASTA)	NCBI Sequence Viewer
	EDL41217	(Get FASTA)	NCBI Sequence Viewer
	EDL41218	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000068532
	ENSMUSP00000068532.7
	ENSMUSP00000098327
	ENSMUSP00000098327.4
	ENSMUSP00000123292
GenBank Protein	Q8R087	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_666157 ⟸ NM_146045
- Peptide Label:	isoform 1
- UniProtKB:	Q7TNU3 (UniProtKB/Swiss-Prot), Q8R087 (UniProtKB/Swiss-Prot), Q3TAW1 (UniProtKB/TrEMBL), Q3UR73 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLPSRRKAAQLPWEDGRARLLPGGLRRKCSIFHLFIAFLLLVFFSLLWLQLSCSGDMAQVTRGQ GQETSGPPRACPPEPPPEHWEEDESWGPHRLAVLVPFRERFEELLVFVPHMHRFLSRKRIQHHI YVLNQVDHFRFNRAALINVGFLESSNSTDYIAMHDVDLLPLNEELDYGFPEAGPFHVASPELHP LYHYKTYVGGILLLSKQHYQLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGITTGYQTFR HLHDPAWRKRDQKRIAAQKQEQFKVDREGGLNTVKYRVDSRTALSIGGAPCTVLNVMLDCDKTA TPWCIFG hide sequence

RefSeq Acc Id:	NP_001298066 ⟸ NM_001311137
- Peptide Label:	isoform 2
- UniProtKB:	Q3UR73 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLPSRRKAAQLPWEDGRARLLPGGLRRKCSIFHLFIAFLLLVFFSLLWLQLSCSGDMAQVTRGQ GQETSGPPRACPPEPPPEHWEEDESWGPHRLAVLVPFRERFEELLVFVPHMHRFLSRKRIQHHI YVLNQVDHFRFNRAALINVGFLESSNSTDYIAMHDVDLLPLNEELDYGFPEAGPFHVASPELHP LYHYKTYVGGILLLSKQHYQLCNGMSNRFWGWGREDDEFYRRIKGAGLQEQFKVDREGGLNTVK YRVDSRTALSIGGAPCTVLNVMLDCDKTATPWCIFG hide sequence

Ensembl Acc Id:

ENSMUSP00000123292 ⟸ ENSMUST00000133176

Ensembl Acc Id:

ENSMUSP00000098327 ⟸ ENSMUST00000100764

Ensembl Acc Id:

ENSMUSP00000068532 ⟸ ENSMUST00000064701

RefSeq Acc Id:	XP_036013888 ⟸ XM_036157995
- Peptide Label:	isoform X1
- UniProtKB:	Q3UR73 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_036013889 ⟸ XM_036157996
- Peptide Label:	isoform X2
- UniProtKB:	D3Z065 (UniProtKB/TrEMBL)

Protein Domains

Galactosyltransferase C-terminal Galactosyltransferase N-terminal

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q8R087-F1-model_v2	AlphaFold	Q8R087	1-327	view protein structure

Promoters

RGD ID:

8680468

Promoter ID:

EPDNEW_M18265

Type:

initiation region

Name:

B4galt7_1

Description:

Mus musculus xylosylprotein beta1,4-galactosyltransferase, polypeptide7 , transcript variant 2, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	13	55,600,112 - 55,600,172	EPDNEW

RGD ID:

6823722

Promoter ID:

MM_KWN:14256

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen

Transcripts:

ENSMUST00000064701, OTTMUST00000068643, OTTMUST00000068645, OTTMUST00000068646

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	13	55,700,381 - 55,701,582 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:2384987	AgrOrtholog
Ensembl Genes	ENSMUSG00000021504	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000064701	ENTREZGENE
	ENSMUST00000064701.8	UniProtKB/Swiss-Prot
	ENSMUST00000100764	ENTREZGENE
	ENSMUST00000100764.10	UniProtKB/Swiss-Prot
	ENSMUST00000133176	ENTREZGENE
Gene3D-CATH	Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A	UniProtKB/Swiss-Prot
InterPro	Galactosyl_T	UniProtKB/Swiss-Prot
	Galactosyl_T_C	UniProtKB/Swiss-Prot
	Galactosyl_T_N	UniProtKB/Swiss-Prot
	Nucleotide-diphossugar_trans	UniProtKB/Swiss-Prot
KEGG Report	mmu:218271	UniProtKB/Swiss-Prot
MGD	MGI:2384987	ENTREZGENE
NCBI Gene	218271	ENTREZGENE
PANTHER	BETA-1,4-GALACTOSYLTRANSFERASE 7	UniProtKB/Swiss-Prot
	PTHR19300	UniProtKB/Swiss-Prot
Pfam	Glyco_transf_7C	UniProtKB/Swiss-Prot
	Glyco_transf_7N	UniProtKB/Swiss-Prot
PhenoGen	B4galt7	PhenoGen
PRINTS	B14GALTRFASE	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF53448	UniProtKB/Swiss-Prot
UniProt	B4GT7_MOUSE	UniProtKB/Swiss-Prot
	D3Z065	ENTREZGENE, UniProtKB/TrEMBL
	Q3TAW1	ENTREZGENE, UniProtKB/TrEMBL
	Q3UR73	ENTREZGENE, UniProtKB/TrEMBL
	Q7TNU3	ENTREZGENE
	Q8R087	ENTREZGENE
UniProt Secondary	Q7TNU3	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2023-07-04	B4galt7	beta-1,4-galactosyltransferase 7	B4galt7	xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - KEGG (archival)