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Gene: Col6a6 (collagen, type VI, alpha 6) Mus musculus
Symbol: Col6a6
Name: collagen, type VI, alpha 6
Description: Predicted to have extracellular matrix structural constituent conferring tensile strength. Predicted to be involved in cell adhesion. Localizes to the extracellular region. Is expressed in several structures, including genitourinary system; intraembryonic coelom; liver; lung; and musculoskeletal system. Orthologous to human COL6A6 (collagen type VI alpha 6 chain); PARTICIPATES IN cell-extracellular matrix signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3,4-methylenedioxymethamphetamine; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: collagen alpha-6(VI) chain; E330019B14; E330026B02Rik
Homo sapiens (human) : COL6A6 (collagen type VI alpha 6 chain)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Col6a6 (collagen type VI alpha 6 chain)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col6a6 (collagen type VI alpha 6 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL6A6 (collagen type VI alpha 6 chain)
Canis lupus familiaris (dog) : COL6A6 (collagen type VI alpha 6 chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Col6a6 (collagen type VI alpha 6 chain)
Sus scrofa (pig) : COL6A6 (collagen type VI alpha 6 chain)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
GRCm389105,689,417 - 105,828,246 (-)NCBIGRCm38GRCm38mm10GRCm38
MGSCv379105,591,747 - 105,730,415 (-)NCBIGRCm37mm9NCBIm37
MGSCv369105,632,212 - 105,667,748 (-)NCBImm8
Celera9105,286,549 - 105,432,429 (-)NCBICelera
Cytogenetic Map9 F1NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status


Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
More on Col6a6
Alliance Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1319364
Created: 2005-01-12
Species: Mus musculus
Last Modified: 2019-09-12
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.