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Gene: SMNDC1 (survival motor neuron domain containing 1) Homo sapiens
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Symbol: SMNDC1
Name: survival motor neuron domain containing 1
Description: Exhibits RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to localize to the nucleoplasm.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: 30 kDa splicing factor SMNrp; SMN-related protein; SMNR; SPF30; splicing factor 30, survival of motor neuron-related; survival motor neuron domain-containing protein 1; survival of motor neuron-related-splicing factor 30; TDRD16C; tudor domain containing 16C
Orthologs:
Mus musculus (house mouse) : Smndc1 (survival motor neuron domain containing 1)  MGI  Alliance
Rattus norvegicus (Norway rat) : Smndc1 (survival motor neuron domain containing 1)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Smndc1 (survival motor neuron domain containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SMNDC1 (survival motor neuron domain containing 1)
Canis lupus familiaris (dog) : SMNDC1 (survival motor neuron domain containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Smndc1 (survival motor neuron domain containing 1)
Sus scrofa (pig) : SMNDC1 (survival motor neuron domain containing 1)
Chlorocebus sabaeus (green monkey) : SMNDC1 (survival motor neuron domain containing 1)
Heterocephalus glaber (naked mole-rat) : Smndc1 (survival motor neuron domain containing 1)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38 Ensembl10110,290,730 - 110,304,938 (-)Ensembl
GRCh3810110,290,730 - 110,304,969 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh3710112,052,798 - 112,064,707 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3610112,042,788 - 112,054,687 (-)NCBINCBI36hg18NCBI36
Build 3410112,042,788 - 112,054,687NCBI
Celera10105,784,468 - 105,796,377 (-)NCBI
Cytogenetic Map10q25.2NCBI
HuRef10105,683,016 - 105,694,926 (-)NCBIHuRef
CHM1_110112,334,567 - 112,346,476 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
 
More on SMNDC1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1319332
Created: 2005-01-12
Species: Homo sapiens
Last Modified: 2020-02-11
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.