Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: COL22A1 (collagen type XXII alpha 1 chain) Homo sapiens
Analyze
Symbol: COL22A1
Name: collagen type XXII alpha 1 chain
Description: Predicted to have extracellular matrix structural constituent. Predicted to be involved in extracellular matrix organization. Predicted to localize to the extracellular matrix and extracellular space. Implicated in intracranial aneurysm.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: collagen alpha-1(XXII) chain; collagen alpha-1(XXII) chain-like; collagen type XXII alpha 1; collagen, type XXII, alpha 1
Orthologs:
Mus musculus (house mouse) : Col22a1 (collagen, type XXII, alpha 1)  MGI  Alliance
Rattus norvegicus (Norway rat) : Col22a1 (collagen type XXII alpha 1 chain)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col22a1 (collagen type XXII alpha 1 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL22A1 (collagen type XXII alpha 1 chain)
Canis lupus familiaris (dog) : COL22A1 (collagen type XXII alpha 1 chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Col22a1 (collagen type XXII alpha 1 chain)
Sus scrofa (pig) : COL22A1 (collagen type XXII alpha 1 chain)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388138,588,235 - 138,914,087 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh378139,600,478 - 139,926,236 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368139,669,660 - 139,995,418 (-)NCBINCBI36hg18NCBI36
Celera8135,769,113 - 136,093,411 (-)NCBI
Cytogenetic Map8q24.23-q24.3NCBI
HuRef8134,914,571 - 135,063,660 (-)NCBIHuRef
HuRef8135,079,773 - 135,237,211 (-)NCBIHuRef
CHM1_18139,640,714 - 139,967,048 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on COL22A1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1319222
Created: 2005-01-12
Species: Homo sapiens
Last Modified: 2019-10-16
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.