Wapl (WAPL cohesin release factor) - Rat Genome Database

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Gene: Wapl (WAPL cohesin release factor) Mus musculus
Analyze
Symbol: Wapl
Name: WAPL cohesin release factor
RGD ID: 1319038
MGI Page MGI
Description: Involved in several processes, including positive regulation of fibroblast proliferation; regulation of chromosome organization; and regulation of chromosome segregation. Localizes to chromatin and synaptonemal complex. Is expressed in several structures, including alimentary system; genitourinary system; integumental system; nervous system; and respiratory system. Orthologous to human WAPL (WAPL cohesin release factor).
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: 2410073G16; A530089A20Rik; BC037674; DIF-2; dioxin-inducible factor 2; FOE; friend of EBNA2; KIAA0261; mKIAA0261; mWAPL; W; Wapal; wings apart-like homolog; wings apart-like protein homolog
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391434,394,086 - 34,469,940 (+)NCBIGRCm39mm39
GRCm39 Ensembl1434,395,885 - 34,469,940 (+)Ensembl
GRCm381434,672,379 - 34,747,983 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1434,673,928 - 34,747,983 (+)EnsemblGRCm38mm10GRCm38
MGSCv371435,487,114 - 35,559,403 (+)NCBIGRCm37mm9NCBIm37
MGSCv361433,503,214 - 33,575,044 (+)NCBImm8
Celera1430,941,041 - 31,013,556 (+)NCBICelera
Cytogenetic Map14BNCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11544199   PMID:12466851   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273  
PMID:14621295   PMID:14681479   PMID:15150110   PMID:15345747   PMID:15620708   PMID:15747579   PMID:16141072   PMID:16141073   PMID:17015433   PMID:17093407   PMID:17113138   PMID:17967808  
PMID:18199270   PMID:18799693   PMID:21589869   PMID:21699228   PMID:21873635   PMID:22083510   PMID:23920377   PMID:23975099   PMID:24216511   PMID:27113764   PMID:27760328   PMID:28378742  
PMID:28424523   PMID:29217590   PMID:31202577   PMID:32325033   PMID:32328639   PMID:32612238   PMID:33318687  


Genomics

Comparative Map Data
Wapl
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391434,394,086 - 34,469,940 (+)NCBIGRCm39mm39
GRCm39 Ensembl1434,395,885 - 34,469,940 (+)Ensembl
GRCm381434,672,379 - 34,747,983 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1434,673,928 - 34,747,983 (+)EnsemblGRCm38mm10GRCm38
MGSCv371435,487,114 - 35,559,403 (+)NCBIGRCm37mm9NCBIm37
MGSCv361433,503,214 - 33,575,044 (+)NCBImm8
Celera1430,941,041 - 31,013,556 (+)NCBICelera
Cytogenetic Map14BNCBI
WAPL
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1086,435,256 - 86,521,792 (-)EnsemblGRCh38hg38GRCh38
GRCh381086,435,256 - 86,521,816 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371088,195,013 - 88,281,549 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361088,184,993 - 88,271,521 (-)NCBINCBI36hg18NCBI36
Build 341088,184,993 - 88,271,521NCBI
Celera1082,193,855 - 82,283,880 (-)NCBI
Cytogenetic Map10q23.2NCBI
HuRef1082,045,663 - 82,136,011 (-)NCBIHuRef
CHM1_11088,476,841 - 88,563,395 (-)NCBICHM1_1
Wapl
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21610,005,520 - 10,075,270 (+)NCBI
Rnor_6.0 Ensembl1611,032,531 - 11,106,589 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01611,029,325 - 11,108,867 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0169,354,539 - 9,434,346 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41610,337,231 - 10,408,154 (+)NCBIRGSC3.4rn4RGSC3.4
Celera165,142,468 - 5,211,200 (-)NCBICelera
Cytogenetic Map16p15NCBI
Wapl
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555105,593,335 - 5,674,221 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555105,596,622 - 5,674,221 (-)NCBIChiLan1.0ChiLan1.0
WAPL
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11086,422,170 - 86,512,224 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1086,422,170 - 86,512,207 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01082,862,852 - 82,953,284 (-)NCBIMhudiblu_PPA_v0panPan3
WAPL
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1434,219,644 - 34,297,456 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl434,219,645 - 34,302,839 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha434,208,790 - 34,290,635 (-)NCBI
ROS_Cfam_1.0434,549,886 - 34,631,818 (-)NCBI
UMICH_Zoey_3.1434,422,845 - 34,504,994 (-)NCBI
UNSW_CanFamBas_1.0434,592,237 - 34,674,023 (-)NCBI
UU_Cfam_GSD_1.0435,097,493 - 35,179,330 (-)NCBI
Wapl
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721344,243,869 - 44,321,323 (+)NCBI
SpeTri2.0NW_004936804354,201 - 431,655 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
WAPL
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1487,492,453 - 87,588,570 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11487,492,452 - 87,588,678 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21494,746,694 - 94,842,934 (-)NCBISscrofa10.2Sscrofa10.2susScr3
WAPL
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1945,335,423 - 45,420,785 (+)NCBI
ChlSab1.1 Ensembl945,334,981 - 45,420,787 (+)Ensembl
Vero_WHO_p1.0NW_0236660485,449,262 - 5,535,020 (+)NCBI
Wapl
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624841534,148 - 611,014 (+)NCBI

Position Markers
D9Mit34.1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7F1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map2C1.3UniSTS
Cytogenetic Map19D1UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11B4UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map1C1.3UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map2E2UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map1E3UniSTS
Cytogenetic Map5E1UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map16B3UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map19D3UniSTS
Cytogenetic Map1H5UniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map9DUniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map17DUniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map13A1UniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map12A3UniSTS
Cytogenetic Map1H2.1UniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map6A2UniSTS
Cytogenetic Map7B1UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map5C3.1UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map11B1.1UniSTS
Cytogenetic Map1H6UniSTS
Cytogenetic Map2C2UniSTS
Cytogenetic Map19CUniSTS
Cytogenetic Map17E1.3UniSTS
Cytogenetic Map5A1UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map13A5UniSTS
Cytogenetic MapXA1.1UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map3A3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map8CUniSTS
Cytogenetic Map12EUniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map1H1UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map1A2UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXC-DUniSTS
Cytogenetic Map5G1.3UniSTS
Cytogenetic Map7D1-E2UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map1H2.2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map16C1.1UniSTS
Cytogenetic Map15F2UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map1H4-H6UniSTS
Cytogenetic Map12D2UniSTS
Cytogenetic Map1G3UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map1H3UniSTS
Cytogenetic Map19BUniSTS
cM Map950.0UniSTS
Whitehead Genetic943.7UniSTS
D10Mit157.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Cytogenetic Map16B4UniSTS
Cytogenetic Map18E2UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic Map7B2UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map14E2.2UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map6C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map17A1UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map3BUniSTS
Cytogenetic Map8C1UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8E2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map18B1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map14C2UniSTS
Cytogenetic Map6A1UniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map13D2.1UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map17E3UniSTS
Cytogenetic Map11B3UniSTS
Cytogenetic Map1H4UniSTS
Cytogenetic Map6A3UniSTS
Cytogenetic Map5E4-E5UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map13DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map14D1UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map8D3UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map1H2.3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map15D2UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map1C4UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9F3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map9A4UniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map1A5UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map6G1UniSTS
Cytogenetic MapXA2UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map5E2UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map9BUniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map10A4UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1C2UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map1BUniSTS
Cytogenetic Map17A3.1UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map15A2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic Map4A3UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map8A1UniSTS
Cytogenetic Map8A1.1UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map10B1UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map4A1UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map17CUniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map5E3UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map14C1UniSTS
Cytogenetic Map14E5UniSTS
Cytogenetic Map10CUniSTS
Cytogenetic Map18B2UniSTS
Cytogenetic Map2F1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map17A2UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map17B2UniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map13C3UniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map7E3UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map9E3.1UniSTS
Cytogenetic Map15E3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXE3UniSTS
Cytogenetic Map4C4UniSTS
Cytogenetic Map3E3UniSTS
Cytogenetic Map11A4UniSTS
Cytogenetic Map4C5UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map7E1UniSTS
Cytogenetic Map5D-E1UniSTS
Cytogenetic Map5B3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map5A2UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map17E4UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic Map15B3.1UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map6A3.3UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map1E3-E4UniSTS
Cytogenetic Map9F1-F3UniSTS
Cytogenetic Map1C1.1UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map12A2UniSTS
Cytogenetic Map17A3-BUniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map14A3UniSTS
Cytogenetic Map5G1.1UniSTS
Cytogenetic MapXF2-F4UniSTS
Cytogenetic Map7D2UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map10A3UniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map9F1-F2UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map10A2UniSTS
Cytogenetic Map1C1UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map12D3UniSTS
Cytogenetic Map1A3-A5UniSTS
Cytogenetic Map2A2UniSTS
Cytogenetic Map3A1UniSTS
Cytogenetic MapXA3.3UniSTS
Cytogenetic Map16A-B1UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map6B2.3UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic MapXA2-A3.1UniSTS
Cytogenetic Map9A5.3UniSTS
Cytogenetic Map14A2-BUniSTS
Cytogenetic Map8E1-E2UniSTS
Cytogenetic Map8A3UniSTS
Cytogenetic Map1G3-H1UniSTS
Cytogenetic Map8B3-C1UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map8C5UniSTS
Cytogenetic Map8A4UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map14E4UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic MapXF5UniSTS
cM Map1040.0UniSTS
Whitehead Genetic1033.9UniSTS
RH79889  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381434,745,705 - 34,745,934UniSTSGRCm38
MGSCv371435,558,891 - 35,559,120UniSTSGRCm37
Celera1431,013,044 - 31,013,273UniSTS
Cytogenetic Map14BUniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301991Wta3_mweight adult 3 (mouse)Not determined14383740537837582Mouse
4141550Dbm3_mdiabetes modifier 3 (mouse)Not determined509340539093528Mouse
27226748Femd8_mfemur midshaft diameter 8, 10 week (mouse)14870000046500000Mouse
27226752Femd4_mfemur midshaft diameter 4, 5 week (mouse)14870000047000000Mouse
1300779Dyscalc4_mdystrophic cardiac calcinosis 4 (mouse)Not determined141249091446491050Mouse
4141864Mrdq4_mmodifier of retinal degeneration QTL 4 (mouse)Not determined1254601848527625Mouse
1300544Hypn_mhyperinsulinemia (mouse)Not determined141543865949438808Mouse
1301372Sluc13_msusceptibility to lung cancer 13 (mouse)Not determined141910564753105769Mouse
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420837405121032392Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142101238271648361Mouse
14746973Manh76_mmandible shape 76 (mouse)142256526056565260Mouse
4142485Modor2_mmodifier of ocular retardation 2 (mouse)Not determined142492582457942312Mouse
13506929Recrq10_mrecombination rate in male meiosis QTL 10 (mouse)142820000060900000Mouse
10043886Cia49_mcollagen induced arthritis QTL 49 (mouse)Not determined142975953763759676Mouse
1300998Cia17_mcollagen induced arthritis 17 (mouse)Not determined143009779364097924Mouse
1300909Ath13_matherosclerosis 13 (mouse)Not determined143009779364097924Mouse
27226775Tibl7_mtibia length 7, 5 week (mouse)143060000048600000Mouse
27226744Metcl6_mmetatarsal-calcaneal length 6, 5 week (mouse)143060000052700000Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143060000087700000Mouse
27226737Metcl12_mmetatarsal-calcaneal length 12, 10 week (mouse)143350000059200000Mouse
14696688Rfq2_mrearing frequency QTL 2, males (mouse)143400000036000000Mouse
27226727Tibl21_mtibia length 21, 16 week (mouse)143440000052700000Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1629
Count of miRNA genes:663
Interacting mature miRNAs:844
Transcripts:ENSMUST00000048263, ENSMUST00000090027, ENSMUST00000111895, ENSMUST00000151285, ENSMUST00000169910, ENSMUST00000172658, ENSMUST00000174559
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001004436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001301330 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006518824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB167349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC154276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK041191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045727 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK046038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK050157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK129105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC139434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC145625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG068179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP757948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY732412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF161743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ053978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ061782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ134128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DV646537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DV659439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000048263   ⟹   ENSMUSP00000040232
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1434,673,928 - 34,747,983 (+)Ensembl
RefSeq Acc Id: ENSMUST00000090027   ⟹   ENSMUSP00000087481
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1434,674,173 - 34,746,080 (+)Ensembl
RefSeq Acc Id: ENSMUST00000111895
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1434,694,337 - 34,746,217 (+)Ensembl
RefSeq Acc Id: ENSMUST00000151285   ⟹   ENSMUSP00000117282
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1434,725,990 - 34,746,219 (+)Ensembl
RefSeq Acc Id: ENSMUST00000169910   ⟹   ENSMUSP00000130547
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1434,674,122 - 34,745,952 (+)Ensembl
RefSeq Acc Id: ENSMUST00000172658
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1434,709,080 - 34,724,829 (+)Ensembl
RefSeq Acc Id: ENSMUST00000174559   ⟹   ENSMUSP00000133779
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1434,737,271 - 34,741,127 (+)Ensembl
RefSeq Acc Id: NM_001004436   ⟹   NP_001004436
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391434,395,885 - 34,469,940 (+)NCBI
GRCm381434,673,928 - 34,747,983 (+)NCBI
MGSCv371435,487,114 - 35,559,403 (+)RGD
Celera1430,941,041 - 31,015,322 (+)NCBI
cM Map14 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001301330   ⟹   NP_001288259
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391434,395,885 - 34,469,940 (+)NCBI
GRCm381434,673,928 - 34,747,983 (+)NCBI
Celera1430,941,041 - 31,015,322 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006518824   ⟹   XP_006518887
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391434,394,086 - 34,468,176 (+)NCBI
GRCm381434,672,379 - 34,746,219 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_001004436   ⟸   NM_001004436
- Peptide Label: isoform 1
- UniProtKB: Q65Z40 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006518887   ⟸   XM_006518824
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_001288259   ⟸   NM_001301330
- Peptide Label: isoform 2
- UniProtKB: Q65Z40 (UniProtKB/Swiss-Prot),   B7ZP47 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000087481   ⟸   ENSMUST00000090027
RefSeq Acc Id: ENSMUSP00000040232   ⟸   ENSMUST00000048263
RefSeq Acc Id: ENSMUSP00000117282   ⟸   ENSMUST00000151285
RefSeq Acc Id: ENSMUSP00000133779   ⟸   ENSMUST00000174559
RefSeq Acc Id: ENSMUSP00000130547   ⟸   ENSMUST00000169910
Protein Domains
WAPL

Promoters
RGD ID:8681942
Promoter ID:EPDNEW_M19002
Type:initiation region
Name:Wapl_1
Description:Mus musculus WAPL cohesin release factor , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381434,673,910 - 34,673,970EPDNEW
RGD ID:6824594
Promoter ID:MM_KWN:16220
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:AK017998_5830448L01RIK,   ENSMUST00000090027,   OTTMUST00000059998
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361435,484,826 - 35,487,857 (-)MPROMDB
RGD ID:6825525
Promoter ID:MM_KWN:16221
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:ENSMUST00000111895
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361435,507,171 - 35,507,671 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2675859 AgrOrtholog
Ensembl Genes ENSMUSG00000041408 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000040232 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000087481 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000117282 UniProtKB/TrEMBL
  ENSMUSP00000130547 UniProtKB/Swiss-Prot
  ENSMUSP00000133779 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000048263 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000090027 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000151285 UniProtKB/TrEMBL
  ENSMUST00000169910 UniProtKB/Swiss-Prot
  ENSMUST00000174559 UniProtKB/TrEMBL
Gene3D-CATH 1.25.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ARM-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WAPL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WAPL_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WAPL_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:218914 UniProtKB/Swiss-Prot
MGD MGI:2675859 ENTREZGENE
NCBI Gene 218914 ENTREZGENE
PANTHER PTHR22100 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam WAPL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Wapl PhenoGen
PROSITE WAPL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48371 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B7ZP47 ENTREZGENE, UniProtKB/TrEMBL
  F6YCH1_MOUSE UniProtKB/TrEMBL
  G3UXQ2_MOUSE UniProtKB/TrEMBL
  Q65Z40 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary B9EIG8 UniProtKB/Swiss-Prot
  Q6ZQE9 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-08-18 Wapl  WAPL cohesin release factor  Wapal  wings apart-like homolog (Drosophila)  Symbol and/or name change 5135510 APPROVED