Nprl2 (NPR2 like, GATOR1 complex subunit)

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Gene: Nprl2 (NPR2 like, GATOR1 complex subunit) Mus musculus

Analyze

Symbol:

Nprl2

Name:

NPR2 like, GATOR1 complex subunit

RGD ID:

1318979

MGI Page

MGI

Description:

Predicted to contribute to GTPase activator activity. Predicted to be involved in several processes, including cellular response to starvation; negative regulation of TOR signaling; and regulation of autophagy. Predicted to localize to GATOR1 complex and lysosomal membrane. Human ortholog(s) of this gene implicated in focal epilepsy. Orthologous to human NPRL2 (NPR2 like, GATOR1 complex subunit); PARTICIPATES IN mTOR signaling pathway; INTERACTS WITH 1,2-dimethylhydrazine; 2,3',4,4',5-Pentachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Also known as:

2810446G01Rik; G21; GATOR complex protein NPRL2; gene 21 protein; N; nitrogen permase homolog; nitrogen permease regulator 2-like protein; nitrogen permease regulator-like 2; NPR2-like protein; NPR2L; tumor suppressor candidate 4; Tusc; Tusc4

RGD Orthologs

Human

Rat

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NPRL2 (NPR2 like, GATOR1 complex subunit)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Nprl2 (NPR2-like, GATOR1 complex subunit)	HGNC	Treefam, EggNOG, OrthoMCL, NCBI, OMA, HomoloGene, Inparanoid, Panther, PhylomeDB, OrthoDB, Ensembl
Chinchilla lanigera (long-tailed chinchilla):	Nprl2 (NPR2 like, GATOR1 complex subunit)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	NPRL2 (NPR2 like, GATOR1 complex subunit)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	NPRL2 (NPR2 like, GATOR1 complex subunit)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Nprl2 (NPR2 like, GATOR1 complex subunit)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	NPRL2 (NPR2 like, GATOR1 complex subunit)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	NPRL2 (NPR2 like, GATOR1 complex subunit)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Nprl2 (NPR2 like, GATOR1 complex subunit)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Nprl2 (NPR2-like, GATOR1 complex subunit)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|TreeFam)
Homo sapiens (human):	NPRL2 (NPR2 like, GATOR1 complex subunit)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)
Danio rerio (zebrafish):	nprl2 (NPR2 like, GATOR1 complex subunit)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam\|ZFIN)
Saccharomyces cerevisiae (baker's yeast):	NPR2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)
Drosophila melanogaster (fruit fly):	Nprl2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)
Caenorhabditis elegans (roundworm):	nprl-2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)

Latest Assembly:

GRCm38 - Mouse Genome Assembly GRCm38

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	107,419,405 - 107,422,905 (+)	NCBI	GRCm39		mm39
GRCm38	9	107,542,177 - 107,545,706 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	107,542,226 - 107,545,706 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	107,444,540 - 107,448,037 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	9	107,400,327 - 107,403,796 (+)	NCBI			mm8
Celera	9	107,150,974 - 107,154,469 (+)	NCBI		Celera
Cytogenetic Map	9	F1	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Familial Focal Epilepsy, with Variable Foci 1 (ISO)

Familial Focal Epilepsy, with Variable Foci 2 (ISO)

genetic disease (ISO)

schizophrenia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (EXP)

2,3',4,4',5-Pentachlorobiphenyl (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-acetamidofluorene (EXP)

5-aza-2'-deoxycytidine (ISO)

aflatoxin B1 (ISO)

amphotericin B (ISO)

antirheumatic drug (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

cisplatin (ISO)

copper(II) sulfate (ISO)

cyclophosphamide (ISO)

dibutyl phthalate (EXP,ISO)

dieldrin (ISO)

disodium selenite (ISO)

doxorubicin (ISO)

folic acid (EXP)

gentamycin (ISO)

glafenine (ISO)

paracetamol (EXP)

Soman (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to amino acid starvation (IBA,ISO)

cellular response to nitrogen starvation (IBA)

negative regulation of kinase activity (ISO)

negative regulation of TOR signaling (IBA,ISO)

positive regulation of autophagy (IBA)

regulation of autophagosome assembly (IBA)

Cellular Component

GATOR1 complex (IBA,ISO)

lysosomal membrane (ISO)

lysosome (IEA)

membrane (IEA)

Molecular Function

GTPase activator activity (ISO)

protein binding (ISO)

protein kinase activity (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

mTOR signaling pathway (ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal amino acid metabolism (IAGP)

abnormal erythropoiesis (IAGP)

abnormal hematopoietic precursor cell number (IAGP)

anophthalmia (IAGP)

decreased embryo size (IAGP)

decreased erythroid progenitor cell number (IAGP)

impaired hematopoiesis (IAGP)

microphthalmia (IAGP)

pale liver (IAGP)

References

References - curated


1.	Bar-Peled L and Sabatini DM, Trends Cell Biol. 2014 Jul;24(7):400-6. doi: 10.1016/j.tcb.2014.03.003. Epub 2014 Mar 31.
2.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3.	Lerman MI and Minna JD, Cancer Res 2000 Nov 1;60(21):6116-33.
4.	MGD data from the GO Consortium
5.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6.	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:10922068	PMID:11042159	PMID:11076861	PMID:12477932	PMID:14610273	PMID:15489334	PMID:16141072	PMID:16141073	PMID:16602821	PMID:21677750
PMID:21873635	PMID:26166573	PMID:29768191

Genomics

Comparative Map Data

Nprl2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	107,419,405 - 107,422,905 (+)	NCBI	GRCm39		mm39
GRCm38	9	107,542,177 - 107,545,706 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	107,542,226 - 107,545,706 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	107,444,540 - 107,448,037 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	9	107,400,327 - 107,403,796 (+)	NCBI			mm8
Celera	9	107,150,974 - 107,154,469 (+)	NCBI		Celera
Cytogenetic Map	9	F1	NCBI

NPRL2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	3	50,347,330 - 50,350,826 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	3	50,347,330 - 50,350,821 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	3	50,384,918 - 50,388,486 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	50,359,923 - 50,363,490 (-)	NCBI	NCBI36		hg18	NCBI36
Build 34	3	50,359,922 - 50,363,490	NCBI
Celera	3	50,357,750 - 50,361,317 (-)	NCBI
Cytogenetic Map	3	p21.31	NCBI
HuRef	3	50,440,520 - 50,444,087 (-)	NCBI		HuRef
CHM1_1	3	50,337,194 - 50,340,761 (-)	NCBI		CHM1_1

Nprl2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rnor_6.0	8	116,297,950 - 116,301,123 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	116,297,950 - 116,301,122 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	115,654,210 - 115,657,383 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	112,789,664 - 112,792,837 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	8	112,809,139 - 112,812,182 (+)	NCBI
Celera	8	107,522,243 - 107,525,416 (+)	NCBI		Celera
Cytogenetic Map	8	q32	NCBI

Nprl2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955532	2,148,950 - 2,152,671 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955532	2,148,950 - 2,152,671 (-)	NCBI	ChiLan1.0	ChiLan1.0

NPRL2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	3	51,508,932 - 51,512,791 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	51,508,932 - 51,512,776 (-)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	3	50,273,611 - 50,277,175 (-)	NCBI	Mhudiblu_PPA_v0		panPan3

NPRL2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	20	39,005,734 - 39,009,189 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	20	39,005,699 - 39,009,183 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Nprl2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004939530	1,745 - 5,100 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NPRL2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	13	32,830,895 - 32,834,205 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	36,009,112 - 36,012,405 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NPRL2
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	11,735,853 - 11,739,325 (-)	NCBI

Nprl2
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624730	4,196,154 - 4,200,100 (-)	NCBI

Position Markers

UniSTS:236244

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	9	107,542,303 - 107,542,444	UniSTS	GRCm38
MGSCv37	9	107,444,634 - 107,444,775	UniSTS	GRCm37
Celera	9	107,151,068 - 107,151,209	UniSTS
Cytogenetic Map	9	F1	UniSTS

BF396742

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	9	107,542,396 - 107,543,063	UniSTS	GRCm38
MGSCv37	9	107,444,727 - 107,445,394	UniSTS	GRCm37
Celera	9	107,151,161 - 107,151,828	UniSTS
Cytogenetic Map	9	F1	UniSTS

QTLs in Region (GRCm38)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
13207569	Tcq13_m	total cholesterol QTL 13 (mouse)					9	59990000	109260000	Mouse
4141833	W10q13_m	weight 10 weeks QTL 13 (mouse)			Not determined			63332429	120362868	Mouse
4141545	Tailaq2_m	tail length adjusted QTL 2 (mouse)			Not determined			63332429	120362868	Mouse
1357635	Splq4_m	spleen weight QTL 4 (mouse)			Not determined		9	63332429	120362868	Mouse
1301725	Lifespan1_m	life span 1 (mouse)			Not determined		9	74368177	108368325	Mouse
1302065	El1_m	epilepsy 1 (mouse)			Not determined		9	75775364	114474379	Mouse
10054492	El7_m	epilepsy 7 (mouse)			Not determined		9	75775364	114474379	Mouse
1301407	Rapop2_m	radiation-induced apoptosis 2 (mouse)			Not determined		9	76535936	110536130	Mouse
1301192	Skts6_m	skin tumor susceptibility 6 (mouse)			Not determined		9	78640645	112640755	Mouse
10401247	Bglu14_m	blood glucose level 14 (mouse)			Not determined		9	79397810	113397888	Mouse
1301732	Char1_m	P. chabaudi malaria resistance QTL 1 (mouse)			Not determined		9	81798268	115798392	Mouse
1300884	Sluc11_m	susceptibility to lung cancer 11 (mouse)			Not determined		9	82910333	116910428	Mouse
1357461	Idd2_m	insulin dependent diabetes susceptibility 2 (mouse)			Not determined		9	82910333	116910428	Mouse
10766454	Char10_m	P. chabaudi malaria resistance QTL 10 (mouse)					9	82910333	116910428	Mouse
1301487	Nociq1_m	nociceptive sensitivity inflammatory QTL 1 (mouse)			Not determined		9	84528818	118528921	Mouse
10412180	Msam3_m	muscle, skeletal, activity measure 3 (mouse)			Not determined		9	85897510	108641186	Mouse
1300549	Bbaa17_m	B. burgdorferi-associated arthritis 17 (mouse)			Not determined		9	86230401	120230530	Mouse
1302103	Dob2_m	dietary obesity 2 (mouse)			Not determined		9	86239845	120289624	Mouse
11251716	Siim2_m	stress induced immobility 2 (mouse)					9	86748483	120748483	Mouse
12880422	V25Dq6_m	vitamin D inactive form serum level QTL 6 (mouse)					9	87800000	121800000	Mouse
10412242	Alpq8_m	alcohol preference QTL 8 (mouse)			Not determined		9	89284925	123284925	Mouse
1301649	Psl1_m	promotion susceptibility QTL 1 (mouse)			Not determined		9	89412277	123412396	Mouse
18182932	Metl3_m	metabolite locus 3, N-acetylglutamate (mouse)					9	89563342	123563342	Mouse
1357657	Pymr_m	Plasmodium yoelli malaria resistance (mouse)			Not determined		9	89977005	118938021	Mouse
12910770	Splic1_m	spleen iron content 1 (mouse)					9	91413879	124595110	Mouse
12910772	Lvic6_m	liver iron content 6 (mouse)					9	91413879	124595110	Mouse
12910773	Splic3_m	spleen iron content 3 (mouse)					9	91413879	124595110	Mouse
1558767	Skmw11_m	skeletal muscle weight 11 (mouse)			Not determined		9	91641084	124595110	Mouse
13463474	Hbbcq5_m	hemoglobin concentration QTL 5 (mouse)					9	91641084	124595110	Mouse
13463475	Hctq7_m	hematocrit QTL 7 (mouse)					9	91641084	124595110	Mouse
13463477	Rbc9_m	red blood cell count 9 (mouse)					9	91641084	124595110	Mouse
13463478	Mchq18_m	mean corpuscular hemoglobin QTL 18 (mouse)					9	91641084	124595110	Mouse
13463480	Mchcq2_m	mean corpuscular hemoglobin concentration QTL 2 (mouse)					9	91641084	124595110	Mouse
12904937	Edlmmq9_m	extensor digitorum longus muscle mass QTL 9 (mouse)					9	91683173	124595110	Mouse
12904947	Tammq7_m	tibialis anterior muscle mass QTL 7 (mouse)					9	91683173	124595110	Mouse
12904961	Gmmq7_m	gastrocnemius muscle mass QTL 7 (mouse)					9	91683173	124595110	Mouse
1302001	Bdln5_m	body length 5 (mouse)			Not determined		9	93762590	124595110	Mouse
1301484	Bwq6_m	body weight (mouse)			Not determined		9	93762590	124595110	Mouse
14746992	Manh67_m	mandible shape 67 (mouse)					9	94036768	124595110	Mouse
11081166	Psl5_m	promotion susceptibility QTL 5 (mouse)					9	94981301	112872929	Mouse
11537364	Cnes5_m	C. neoformans susceptibility locus 5 (mouse)					9	96917590	124595110	Mouse
1301297	Lcho1_m	liver cholesterol 1 (mouse)			Not determined		9	101060861	124595110	Mouse
1357627	Tgq2_m	triglyceride QTL 2 (mouse)			Not determined		9	102000187	124595110	Mouse
1357648	Obq18_m	obesity QTL 18 (mouse)			Not determined		9	102000187	124595110	Mouse
1301789	Pbwg4_m	postnatal body weight growth 4 (mouse)			Not determined		9	103289445	124595110	Mouse
10412290	Pvacm1l_m	plasma vascular cell adhesion molecule 1 levels (mouse)			Not determined		9	103289445	124595110	Mouse
12879896	Berr3_m	berghei resistance locus 3 (mouse)					9	103289445	124595110	Mouse

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	121
Count of miRNA genes:	115
Interacting mature miRNAs:	120
Transcripts:	ENSMUST00000010201
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_018879	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006511768	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006511769	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036155141	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_003947955	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_004935491	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_379769	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF131207	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AI843290	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK010331	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK013299	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK013691	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK088925	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL672219	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC026548	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY131176	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466560	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSMUST00000010201 ⟹ ENSMUSP00000010201

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	9	107,542,226 - 107,545,706 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000192951

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	9	107,543,978 - 107,544,460 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000193628

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	9	107,542,245 - 107,545,695 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000194848

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	9	107,542,261 - 107,543,689 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000195370 ⟹ ENSMUSP00000141746

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	9	107,542,241 - 107,544,634 (+)	Ensembl

RefSeq Acc Id:

NM_018879 ⟹ NP_061367

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	9	107,419,408 - 107,422,905 (+)	NCBI
GRCm38	9	107,542,209 - 107,545,706 (+)	NCBI
MGSCv37	9	107,444,540 - 107,448,037 (+)	RGD
Celera	9	107,150,974 - 107,154,469 (+)	RGD
cM Map	9		ENTREZGENE

Sequence:

show sequence

TGAGTCGCCCTGCGCAGGCGCTGTTGAGTTGACGGCTCGTTGGGTTTGCGCTCACAAACCTGTG
TGACCTACCCGGGCCTCTTTCTCTTTTTGACAGGGTATTCCAAGGCGTAGAGGCGATCCCCACA
CGAAAAACAGGGATTACAGACTTGGATCCAGACAGCGCCATGGGCAGCAGCTGCCGCATCGAAT
GTATATTCTTCAGCGAGTTCCACCCAACGCTGGGACCCAAAATTACCTATCAGGTCCCTGAGGA
TTTCATCTCGCGAGAACTGTTTGACACGGTCCAGGTGTACATCATCACCAAGCCCGAGTTACAG
AACAAGCTCATCACTGTCACAGCCATGGAGAAGAAGCTGATTGGCTGCCCCGTGTGCATTGAAC
ACAAGAAGTACAGCCGCAATGCTCTCCTCTTCAACCTGGGCTTTGTGTGTGACGCTCAGGCTAA
GACTTGTGCCCTGGAACCCATCGTTAAAAAGCTGGCCGGCTACTTGACCACGCTGGAGCTTGAG
AGCAGCTTTGTATCCAACGAGGAGAGCAAGCAGAAGCTGGTGCCCATCATGACCATCCTGCTGG
AAGAGCTGAATGCCTCCGGCCGCTGCACTCTGCCCATTGATGAATCCAACACCATCCACTTGAA
GGTGATCGAGCAGCGGCCAGACCCTCCTGTTGCGCAGGAGTATGATGTGCCCGTCTTTACAAAG
GACAAGGAGGATTTCTTCAGCTCACAGTGGGACCTTACCACACAGCAGATCCTGCCCTACATTG
ACGGGTTTCGCCATGTCCAGAAGATCTCCGCTGAGGCAGACGTGGAACTCAACCTGGTGCGCAT
CGCCATTCAGAACCTGCTGTACTATGGTGTTGTGACACTGGTATCCATCCTCCAGTACTCCAAT
GTGTATTGCCCAACACCAAAAGTCCAGGATCTGGTGGATGACAAGTCCCTGCAGGAGGCATGTC
TGTCCTACGTCACCAAGCAAGGACACAAAAGGGCCAGTCTCCGAGATGTGTTCCAGCTATACTG
CAGCCTGAGCCCTGGTACCACTGTGCGAGACCTCATTGGCCGCCACCCCCAGCAGTTACAACAC
GTTGATGAAAGGAAGCTGATCCAGTTTGGGCTGATGAAGAACCTTATCCGGAGACTACAGAAAT
ATCCAGTCCGAGTGTCTCGGGAGGAGCGGAGCCACCCTGCCAGGCTTTACACGGGCTGTCACAG
CTATGATGAGATCTGCTGCAAGACAGGCATGAGCTACCATGAGCTGGACGAGCGACTAGAAAAT
GACCCCAACATCATCATCTGCTGGAAGTGAGGCTGGCTAGCTGGAACATGTTACTATGGCTACT
TGCCCCTACTAAGGCCTCCTTGGTCCACTGGAGCTAGACAAGTATGGTTGTACATATGGTCTGG
AGGGTGAGACTCGGTTTTGTAAATAAAGTTATGTGTTTCATCCTGTGGAAAAAAAAAAAAAAAA
A

hide sequence

RefSeq Acc Id:

XM_006511768 ⟹ XP_006511831

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	9	107,419,405 - 107,422,905 (+)	NCBI
GRCm38	9	107,542,177 - 107,545,706 (+)	NCBI

Sequence:

show sequence

CTCCCATCCCATCCAGCGGCAACCACGCCCCCTGAGTCGCCCTGCGCAGGCGCTGTTGAGTTGA
CGGCTCGTTGGGTTTGCGCTCACAAACCTGTGTGACCTACCCGGGCCTCTTTCTCTTTTTGACA
GGGTATTCCAAGGCGTAGAGGCGATCCCCACACGAAAAACAGGGATTACAGACTTGGATCCAGA
CAGCGCCATGGGCAGCAGCTGCCGCATCGAATGTATATTCTTCAGCGAGTTCCACCCAACGCTG
GGACCCAAAATTACCTATCAGGTCCCTGAGGATTTCATCTCGCGAGAACTGTTTGACACGGTCC
AGGTGTACATCATCACCAAGCCCGAGTTACAGAACAAGCTCATCACTGTCACAGCCATGGAGAA
GAAGCTGATTGGCTGCCCCGTGTGCATTGAACACAAGAAGTACAGCCGCAATGCTCTCCTCTTC
AACCTGGGCTTTGTGTGTGACGCTCAGGCTAAGACTTGTGCCCTGGAACCCATCGTTAAAAAGC
TGGCCGGCTACTTGACCACGCTGGAGCTTGAGAGCAGCTTTGTATCCAACGAGGAGAGCAAGCA
GAAGCTGGTGCCCATCATGACCATCCTGCTGGAAGAGCTGAATGCCTCCGGCCGCTGCACTCTG
CCCATTGATGAATCCAACACCATCCACTTGAAGGTGATCGAGCAGCGGCCAGACCCTCCTGTTG
CGCAGGAGTATGATGTGCCCGTCTTTACAAAGGACAAGGAGGATTTCTTCAGCTCACAGTGGGA
CCTTACCACACAGCAGATCCTGCCCTACATTGACGGGTTTCGCCATGTCCAGAAGATCTCCGCT
GAGGCAGACGTGGAACTCAACCTGGTGCGCATCGCCATTCAGAACCTGCTGTACTATGGTGTTG
TGACACTGGTATCCATCCTCCAGTACTCCAATGTGTATTGCCCAACACCAAAAGTCCAGGATCT
GGTGGATGACAAGTCCCTGCAGGAGGCATGTCTGTCCTACGTCACCAAGCAAGGACACAAAAGG
GCCAGTCTCCGAGATGTGTTCCAGCTATACTGCAGCCTGAGCCCTGGTACCACTGTGCGAGACC
TCATTGGCCGCCACCCCCAGCAGTTACAACACGTTGATGAAAGGGCTAGCGTGTCCGGGATATC
ACCTCTCTCCCCCACAATCGCTCAGGAAGCTGATCCAGTTTGGGCTGATGAAGAACCTTATCCG
GAGACTACAGAAATATCCAGTCCGAGTGTCTCGGGAGGAGCGGAGCCACCCTGCCAGGCTTTAC
ACGGGCTGTCACAGCTATGATGAGATCTGCTGCAAGACAGGCATGAGCTACCATGAGCTGGACG
AGCGACTAGAAAATGACCCCAACATCATCATCTGCTGGAAGTGAGGCTGGCTAGCTGGAACATG
TTACTATGGCTACTTGCCCCTACTAAGGCCTCCTTGGTCCACTGGAGCTAGACAAGTATGGTTG
TACATATGGTCTGGAGGGTGAGACTCGGTTTTGTAAATAAAGTTATGTGTTTCATCCTGTGGAA

hide sequence

RefSeq Acc Id:

XM_006511769 ⟹ XP_006511832

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	9	107,419,419 - 107,422,905 (+)	NCBI
GRCm38	9	107,542,201 - 107,545,706 (+)	NCBI

Sequence:

show sequence

ACGCCCCCTGAGTCGCCCTGCGCAGGCGCTGTTGAGTTGACGGCTCGTTGGGTTTGCGCTCACA
AACCTGTGTGACCTACCCGGGCCTCTTTCTCTTTTTGACAGGGTATTCCAAGGCGTAGAGGCGA
TCCCCACACGAAAAACAGGGATTACAGACTTGGATCCAGACAGCGCCATGGGCAGCAGCTGCCG
CATCGAATGTATATTCTTCAGCGAGTTCCACCCAACGCTGGGACCCAAAATTACCTATCAGGTC
CCTGAGGATTTCATCTCGCGAGAACTGTTTGACACGGTCCAGGTGTACATCATCACCAAGCCCG
AGTTACAGAACAAGCTCATCACTGTCACAGCCATGGAGAAGAAGCTGATTGGCTGCCCCGTGTG
CATTGAACACAAGAAGTACAGCCGCAATGCTCTCCTCTTCAACCTGGGCTTTGTGTGTGACGCT
CAGGCTAAGACTTGTGCCCTGGAACCCATCGTTAAAAAGCTGGCCGGCTACTTGACCACGCTGG
AGCTTGAGAGCAGCTTTGTATCCAACGAGGAGAGCAAGCAGAAGCTGGTGCCCATCATGACCAT
CCTGCTGGAAGAGCTGAATGCCTCCGGCCGCTGCACTCTGCCCATTGGTGATCGAGCAGCGGCC
AGACCCTCCTGTTGCGCAGGAGTATGATGTGCCCGTCTTTACAAAGGACAAGGAGGATTTCTTC
AGCTCACAGTGGGACCTTACCACACAGCAGATCCTGCCCTACATTGACGGGTTTCGCCATGTCC
AGAAGATCTCCGCTGAGGCAGACGTGGAACTCAACCTGGTGCGCATCGCCATTCAGAACCTGCT
GTACTATGGTGTTGTGACACTGGTATCCATCCTCCAGTACTCCAATGTGTATTGCCCAACACCA
AAAGTCCAGGATCTGGTGGATGACAAGTCCCTGCAGGAGGCATGTCTGTCCTACGTCACCAAGC
AAGGACACAAAAGGGCCAGTCTCCGAGATGTGTTCCAGCTATACTGCAGCCTGAGCCCTGGTAC
CACTGTGCGAGACCTCATTGGCCGCCACCCCCAGCAGTTACAACACGTTGATGAAAGGAAGCTG
ATCCAGTTTGGGCTGATGAAGAACCTTATCCGGAGACTACAGAAATATCCAGTCCGAGTGTCTC
GGGAGGAGCGGAGCCACCCTGCCAGGCTTTACACGGGCTGTCACAGCTATGATGAGATCTGCTG
CAAGACAGGCATGAGCTACCATGAGCTGGACGAGCGACTAGAAAATGACCCCAACATCATCATC
TGCTGGAAGTGAGGCTGGCTAGCTGGAACATGTTACTATGGCTACTTGCCCCTACTAAGGCCTC
CTTGGTCCACTGGAGCTAGACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGACTCGGTTTT
GTAAATAAAGTTATGTGTTTCATCCTGTGGAA

hide sequence

RefSeq Acc Id:

XM_036155141 ⟹ XP_036011034

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	9	107,419,405 - 107,422,303 (+)	NCBI

RefSeq Acc Id:

XR_003947955

RefSeq Status:

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	9	107,419,405 - 107,422,905 (+)	NCBI
GRCm38	9	107,542,177 - 107,545,706 (+)	NCBI

Sequence:

show sequence

CTCCCATCCCATCCAGCGGCAACCACGCCCCCTGAGTCGCCCTGCGCAGGCGCTGTTGAGTTGA
CGGCTCGTTGGGTTTGCGCTCACAAACCTGTGTGACCTACCCGGGCCTCTTTCTCTTTTTGACA
GGGTATTCCAAGGCGTAGAGGCGATCCCCACACGAAAAACAGGGATTACAGACTTGGATCCAGA
CAGCGCCATGGGCAGCAGCTGCCGCATCGAATGTATATTCTTCAGCGAGTTCCACCCAACGCTG
GGACCCAAAATTACCTATCAGGTCCCTGAGGATTTCATCTCGCGAGAACTGTTTGACACGGTCC
AGGTGTACATCATCACCAAGCCCGAGTTACAGAACAAGCTCATCACTGTCACAGCCATGGAGAA
GAAGCTGATTGGCTGCCCCGTGTGCATTGAACACAAGAAGTACAGCCGCAATGCTCTCCTCTTC
AACCTGGGCTTTGTGTGTGACGCTCAGGCTAAGACTTGTGCCCTGGAACCCATCGTTAAAAAGC
TGGCCGGCTACTTGACCACGCTGGAGCTTGAGAGCAGCTTTGTATCCAACGAGGAGAGCAAGCA
GAAGCTGGTGCCCATCATGACCATCCTGCTGGAAGAGCTGAATGCCTCCGGCCGCTGCACTCTG
CCCATTGATGAATCCAACACCATCCACTTGAAGGTGATCGAGCAGCGGCCAGACCCTCCTGTTG
CGCAGGAGTATGATGTGCCCGTCTTTACAAAGGACAAGGAGGATTTCTTCAGCTCACAGTGGGA
CCTTACCACACAGCAGATCCTGCCCTACATTGACGGGTTTCGCCATGTCCAGAAGATCTCCGCT
GAGGCAGACGTGGAACTCAACCTGGTGCGCATCGCCATTCAGAACCTGCTGTACTATGGTGTTG
TGACACTGGTATCCATCCTCCAGGTAGTACTCCAATGTGTATTGCCCAACACCAAAAGTCCAGG
ATCTGGTGGATGACAAGTCCCTGCAGGAGGCATGTCTGTCCTACGTCACCAAGCAAGGACACAA
AAGGGCCAGTCTCCGAGATGTGTTCCAGCTATACTGCAGCCTGAGCCCTGGTACCACTGTGCGA
GACCTCATTGGCCGCCACCCCCAGCAGTTACAACACGTTGATGAAAGGAAGCTGATCCAGTTTG
GGCTGATGAAGAACCTTATCCGGAGACTACAGAAATATCCAGTCCGAGTGTCTCGGGAGGAGCG
GAGCCACCCTGCCAGGCTTTACACGGGCTGTCACAGCTATGATGAGATCTGCTGCAAGACAGGC
ATGAGCTACCATGAGCTGGACGAGCGACTAGAAAATGACCCCAACATCATCATCTGCTGGAAGT
GAGGCTGGCTAGCTGGAACATGTTACTATGGCTACTTGCCCCTACTAAGGCCTCCTTGGTCCAC
TGGAGCTAGACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGACTCGGTTTTGTAAATAAAG
TTATGTGTTTCATCCTGTGGAA

hide sequence

RefSeq Acc Id:

XR_004935491

RefSeq Status:

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	9	107,419,405 - 107,422,905 (+)	NCBI

RefSeq Acc Id:

XR_379769

RefSeq Status:

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	9	107,419,405 - 107,422,905 (+)	NCBI
GRCm38	9	107,542,177 - 107,545,706 (+)	NCBI

Sequence:

show sequence

CTCCCATCCCATCCAGCGGCAACCACGCCCCCTGAGTCGCCCTGCGCAGGCGCTGTTGAGTTGA
CGGCTCGTTGGGTTTGCGCTCACAAACCTGTGTGACCTACCCGGGCCTCTTTCTCTTTTTGACA
GGGTATTCCAAGGCGTAGAGGCGATCCCCACACGAAAAACAGGGATTACAGACTTGGATCCAGA
CAGCGCCATGGGCAGCAGCTGCCGCATCGAATGTATATTCTTCAGCGAGTTCCACCCAACGCTG
GGACCCAAAATTACCTATCAGGTCCCTGAGGATTTCATCTCGCGAGAACTGTTTGACACGGTCC
AGGTGTACATCATCACCAAGCCCGAGTTACAGAACAAGCTCATCACTGTCACAGCCATGGAGAA
GAAGCTGATTGGCTGCCCCGTGTGCATTGAACACAAGAAGTACAGCCGCAATGCTCTCCTCTTC
AACCTGGGCTTTGTGTGTGACGCTCAGGCTAAGACTTGTGCCCTGGAACCCATCGTTAAAAAGC
TGGCCGGCTACTTGACCACGCTGGAGCTTGAGAGCAGCTTTGTATCCAACGAGGAGAGCAAGCA
GAAGCTGGTGCCCATCATGACCATCCTGCTGGAAGAGCTGAATGCCTCCGGCCGCTGCACTCTG
CCCATTGATGAATCCAACACCATCCACTTGAAGGTGATCGAGCAGCGGCCAGACCCTCCTGTTG
CGCAGGAGTATGATGTGCCCGTCTTTACAAAGGACAAGGAGGATTTCTTCAGCTCACAGTGGGA
CCTTACCACACAGCAGATCCTGCCCTACATTGACGGGTTTCGCCATGTCCAGAAGATCTCCGCT
GAGGCAGACGTGGAACTCAACCTGGTGCGCATCGCCATTCAGAACCTGCTGTGAGTGAAGATCC
GGTTAATGCCTGTTACGGAGCCGTGCCCGAGGAGACCTAAAGGATGCTCAGTAGGTGAGTCTGG
GATGCAGTTAAGTAAAATGTGACCCGTATGGCTGAGCCAGATCAAGCCAGACTCCCAAGGACAT
CCCTCAGGCCCTTGTGACCCCTGCTGTGTTCTAGTACTCCAATGTGTATTGCCCAACACCAAAA
GTCCAGGATCTGGTGGATGACAAGTCCCTGCAGGAGGCATGTCTGTCCTACGTCACCAAGCAAG
GACACAAAAGGGCCAGTCTCCGAGATGTGTTCCAGCTATACTGCAGCCTGAGCCCTGGTACCAC
TGTGCGAGACCTCATTGGCCGCCACCCCCAGCAGTTACAACACGTTGATGAAAGGAAGCTGATC
CAGTTTGGGCTGATGAAGAACCTTATCCGGAGACTACAGAAATATCCAGTCCGAGTGTCTCGGG
AGGAGCGGAGCCACCCTGCCAGGCTTTACACGGGCTGTCACAGCTATGATGAGATCTGCTGCAA
GACAGGCATGAGCTACCATGAGCTGGACGAGCGACTAGAAAATGACCCCAACATCATCATCTGC
TGGAAGTGAGGCTGGCTAGCTGGAACATGTTACTATGGCTACTTGCCCCTACTAAGGCCTCCTT
GGTCCACTGGAGCTAGACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGACTCGGTTTTGTA
AATAAAGTTATGTGTTTCATCCTGTGGAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_061367	(Get FASTA)	NCBI Sequence Viewer
	XP_006511831	(Get FASTA)	NCBI Sequence Viewer
	XP_006511832	(Get FASTA)	NCBI Sequence Viewer
	XP_036011034	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAD33474	(Get FASTA)	NCBI Sequence Viewer
	AAH26548	(Get FASTA)	NCBI Sequence Viewer
	BAB26858	(Get FASTA)	NCBI Sequence Viewer
	BAB28777	(Get FASTA)	NCBI Sequence Viewer
	EDL21193	(Get FASTA)	NCBI Sequence Viewer
	EDL21194	(Get FASTA)	NCBI Sequence Viewer
	Q9WUE4	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_061367 ⟸ NM_018879

- UniProtKB:

Q9WUE4 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MGSSCRIECIFFSEFHPTLGPKITYQVPEDFISRELFDTVQVYIITKPELQNKLITVTAMEKKL
IGCPVCIEHKKYSRNALLFNLGFVCDAQAKTCALEPIVKKLAGYLTTLELESSFVSNEESKQKL
VPIMTILLEELNASGRCTLPIDESNTIHLKVIEQRPDPPVAQEYDVPVFTKDKEDFFSSQWDLT
TQQILPYIDGFRHVQKISAEADVELNLVRIAIQNLLYYGVVTLVSILQYSNVYCPTPKVQDLVD
DKSLQEACLSYVTKQGHKRASLRDVFQLYCSLSPGTTVRDLIGRHPQQLQHVDERKLIQFGLMK
NLIRRLQKYPVRVSREERSHPARLYTGCHSYDEICCKTGMSYHELDERLENDPNIIICWK

hide sequence

RefSeq Acc Id:

XP_006511831 ⟸ XM_006511768

- Peptide Label:

isoform X1

- Sequence:

show sequence

MGSSCRIECIFFSEFHPTLGPKITYQVPEDFISRELFDTVQVYIITKPELQNKLITVTAMEKKL
IGCPVCIEHKKYSRNALLFNLGFVCDAQAKTCALEPIVKKLAGYLTTLELESSFVSNEESKQKL
VPIMTILLEELNASGRCTLPIDESNTIHLKVIEQRPDPPVAQEYDVPVFTKDKEDFFSSQWDLT
TQQILPYIDGFRHVQKISAEADVELNLVRIAIQNLLYYGVVTLVSILQYSNVYCPTPKVQDLVD
DKSLQEACLSYVTKQGHKRASLRDVFQLYCSLSPGTTVRDLIGRHPQQLQHVDERASVSGISPL
SPTIAQEADPVWADEEPYPETTEISSPSVSGGAEPPCQALHGLSQL

hide sequence

RefSeq Acc Id:

XP_006511832 ⟸ XM_006511769

- Peptide Label:

isoform X3

- Sequence:

show sequence

MPPAAALCPLVIEQRPDPPVAQEYDVPVFTKDKEDFFSSQWDLTTQQILPYIDGFRHVQKISAE
ADVELNLVRIAIQNLLYYGVVTLVSILQYSNVYCPTPKVQDLVDDKSLQEACLSYVTKQGHKRA
SLRDVFQLYCSLSPGTTVRDLIGRHPQQLQHVDERKLIQFGLMKNLIRRLQKYPVRVSREERSH
PARLYTGCHSYDEICCKTGMSYHELDERLENDPNIIICWK

hide sequence

RefSeq Acc Id:

ENSMUSP00000010201 ⟸ ENSMUST00000010201

RefSeq Acc Id:

ENSMUSP00000141746 ⟸ ENSMUST00000195370

RefSeq Acc Id:	XP_036011034 ⟸ XM_036155141
- Peptide Label:	isoform X2

Promoters

RGD ID:

6845319

Promoter ID:

MM_KWN:58717

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day3, 3T3L1_Day4, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen

Transcripts:

NM_018879, NM_019720, UC009RLM.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	9	107,442,841 - 107,444,612 (+)	MPROMDB

RGD ID:

8670788

Promoter ID:

EPDNEW_M13425

Type:

multiple initiation site

Name:

Nprl2_1

Description:

Mus musculus nitrogen permease regulator-like 2 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	9	107,542,247 - 107,542,307	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1914482	AgrOrtholog
Ensembl Genes	ENSMUSG00000010057	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein	ENSMUSP00000010201	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUSP00000141746	UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000010201	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUST00000195370	UniProtKB/TrEMBL
InterPro	NPR2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:56032	UniProtKB/Swiss-Prot
MGD	MGI:1914482	ENTREZGENE
NCBI Gene	56032	ENTREZGENE
PANTHER	PTHR12991	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	NPR2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Nprl2	PhenoGen
UniGene	Mm.11337	ENTREZGENE
UniProt	A0A0A6YWX8_MOUSE	UniProtKB/TrEMBL
	NPRL2_MOUSE	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2018-08-14	Nprl2	NPR2 like, GATOR1 complex subunit		nitrogen permease regulator-like 2	Symbol and/or name change	5135510	APPROVED
2012-07-05	Nprl2	nitrogen permease regulator-like 2	Nprl2	nitrogen permease regulator-like 2 (S. cerevisiae)	Symbol and/or name change	5135510	APPROVED
2011-07-27	Nprl2	nitrogen permease regulator-like 2 (S. cerevisiae)	Tusc4	tumor suppressor candidate 4	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations