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Gene: Col6a3 (collagen, type VI, alpha 3) Mus musculus
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Symbol: Col6a3
Name: collagen, type VI, alpha 3
Description: Predicted to have extracellular matrix structural constituent conferring tensile strength. Predicted to be involved in growth plate cartilage chondrocyte morphogenesis. Localizes to several cellular components, including the collagen trimer; extracellular space; and sarcolemma. Used to study Ullrich congenital muscular dystrophy and congenital muscular dystrophy. Human ortholog(s) of this gene implicated in Ullrich congenital muscular dystrophy; dystonia 27; and muscular dystrophy. Is expressed in several structures, including cornea; dermis; genitourinary system; musculoskeletal system; and small intestine. Orthologous to human COL6A3 (collagen type VI alpha 3 chain); PARTICIPATES IN syndecan signaling pathway; cell-extracellular matrix signaling pathway; INTERACTS WITH 1,2-dichloroethane; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AI507288; Col6a-3; collagen alpha 3 chain type VI; collagen alpha-3(VI) chain; collagen alpha3(VI); procollagen, type VI, alpha 3; type VI collagen alpha 3 subunit
Orthologs:
Homo sapiens (human) : COL6A3 (collagen type VI alpha 3 chain)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Col6a3 (collagen type VI alpha 3 chain)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col6a3 (collagen type VI alpha 3 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL6A3 (collagen type VI alpha 3 chain)
Canis lupus familiaris (dog) : COL6A3 (collagen type VI alpha 3 chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Col6a3 (collagen type VI alpha 3 chain)
Sus scrofa (pig) : COL6A3 (collagen type VI alpha 3 chain)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm38 Ensembl190,765,923 - 90,843,971 (-)Ensembl
GRCm38190,766,860 - 90,844,001 (-)NCBIGRCm38GRCm38mm10GRCm38
MGSCv37192,663,435 - 92,740,514 (-)NCBIGRCm37mm9NCBIm37
MGSCv36191,192,168 - 91,253,776 (-)NCBImm8
MGSCv36192,597,264 - 92,674,343 (-)NCBImm8
Celera193,712,460 - 93,789,439 (-)NCBICelera
Cytogenetic Map1 DNCBI
cM Map145.53NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Additional Information

External Database Links
 
More on Col6a3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1318631
Created: 2005-01-12
Species: Mus musculus
Last Modified: 2019-12-25
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.