Zfp287 (zinc finger protein 287) - Rat Genome Database

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Gene: Zfp287 (zinc finger protein 287) Mus musculus
Analyze
Symbol: Zfp287
Name: zinc finger protein 287
RGD ID: 1318495
MGI Page MGI
Description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within positive regulation of DNA-templated transcription and regulation of cytokine production. Predicted to be active in nucleus. Is expressed in bladder; central nervous system; head; and ureter. Orthologous to human ZNF287 (zinc finger protein 287).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: B230333C16Rik; mszf16; mszf74; SKAT; SKAT-2; Skat2; zfp-287; zinc finger protein SKAT-2; zinc finger protein SKAT2; Znf287
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm18205  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391162,583,270 - 62,622,749 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1162,591,182 - 62,622,731 (-)EnsemblGRCm39 Ensembl
GRCm381162,692,444 - 62,731,912 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1162,700,356 - 62,731,905 (-)EnsemblGRCm38mm10GRCm38
MGSCv371162,524,988 - 62,542,595 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361162,529,482 - 62,545,288 (-)NCBIMGSCv36mm8
Celera1169,631,800 - 69,649,417 (-)NCBICelera
Cytogenetic Map11B2NCBI
cM Map1138.62NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
nucleus  (IBA)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Mouse brain organization revealed through direct genome-scale TF expression analysis. Gray PA, etal., Science 2004 Dec 24;306(5705):2255-7.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Mouse MP Annotation Import Pipeline RGD automated import pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9630514   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11093124   PMID:11217851   PMID:12477932   PMID:14681479   PMID:16141072   PMID:16141073   PMID:18287559   PMID:20059953  
PMID:21267068   PMID:21677750   PMID:21873635   PMID:27626380   PMID:30973865   PMID:32325033  


Genomics

Comparative Map Data
Zfp287
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391162,583,270 - 62,622,749 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1162,591,182 - 62,622,731 (-)EnsemblGRCm39 Ensembl
GRCm381162,692,444 - 62,731,912 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1162,700,356 - 62,731,905 (-)EnsemblGRCm38mm10GRCm38
MGSCv371162,524,988 - 62,542,595 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361162,529,482 - 62,545,288 (-)NCBIMGSCv36mm8
Celera1169,631,800 - 69,649,417 (-)NCBICelera
Cytogenetic Map11B2NCBI
cM Map1138.62NCBI
ZNF287
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381716,546,954 - 16,569,212 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1716,546,954 - 16,569,204 (-)EnsemblGRCh38hg38GRCh38
GRCh371716,450,268 - 16,472,526 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361716,395,426 - 16,413,189 (-)NCBINCBI36Build 36hg18NCBI36
Build 341716,395,434 - 16,413,189NCBI
Celera1716,356,542 - 16,375,435 (-)NCBICelera
Cytogenetic Map17p11.2NCBI
HuRef1716,320,449 - 16,339,388 (-)NCBIHuRef
CHM1_11716,463,221 - 16,482,114 (-)NCBICHM1_1
T2T-CHM13v2.01716,449,237 - 16,471,499 (-)NCBIT2T-CHM13v2.0
Zfp287
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81047,896,517 - 47,914,860 (-)NCBIGRCr8
mRatBN7.21047,395,650 - 47,415,610 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1047,397,285 - 47,439,755 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1052,100,517 - 52,117,441 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01051,591,065 - 51,607,989 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01047,094,485 - 47,111,406 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01049,131,764 - 49,150,930 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1049,135,277 - 49,149,479 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01048,913,568 - 48,956,344 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41048,896,296 - 48,913,856 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11048,912,968 - 48,927,504 (-)NCBI
Celera1046,642,693 - 46,659,522 (-)NCBICelera
Cytogenetic Map10q23NCBI
Znf287
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554671,880,859 - 1,896,251 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554671,878,543 - 1,897,735 (-)NCBIChiLan1.0ChiLan1.0
ZNF287
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21956,055,015 - 56,074,926 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11760,866,640 - 60,887,340 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01735,464,681 - 35,485,619 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A110,753,063 - 110,776,732 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A110,756,432 - 110,776,732 (-)Ensemblpanpan1.1panPan2
ZNF287
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1539,384,803 - 39,405,850 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl539,385,442 - 39,402,014 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha539,529,431 - 39,550,480 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0539,493,132 - 39,514,188 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl539,493,142 - 39,514,178 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1539,464,907 - 39,485,934 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0539,410,431 - 39,431,472 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0539,602,257 - 39,623,303 (+)NCBIUU_Cfam_GSD_1.0
Znf287
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560259,700,608 - 59,719,200 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493682194,524 - 109,341 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493682193,014 - 111,271 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF287
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1259,038,774 - 59,053,204 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11259,038,737 - 59,056,979 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21262,165,579 - 62,177,611 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF287
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11615,087,895 - 15,107,194 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660595,868,357 - 5,886,771 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf287
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248773,878,910 - 3,899,394 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla_female_1.0 EnsemblNW_0046248773,830,023 - 3,841,257 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248773,817,976 - 3,902,045 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Zfp287
1400 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1105
Count of miRNA genes:604
Interacting mature miRNAs:738
Transcripts:ENSMUST00000005399, ENSMUST00000127732, ENSMUST00000128370, ENSMUST00000149228, ENSMUST00000150336
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11325000062890826Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111155000068490826Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111175000065990826Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111226863768500330Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1226863768500330Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1226863768500330Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1226863768500330Mouse
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1226863768500330Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111226863768500330Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1226863768500330Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1226863768500330Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111226863768500330Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111226863768500330Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111226863768500330Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111226863769684947Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111705617567078411Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111778196668500330Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
1301426Desp2_mdespair 2 (mouse)Not determined112870858162708700Mouse
11522752Cocia18_mcocaine-induced activity, QTL 18 (mouse)113100820965008209Mouse
11059563Lmr31_mleishmaniasis resistance 31 (mouse)113210057766100694Mouse
1357782Char8_mP. chabaudi malaria resistance QTL 8 (mouse)Not determined113557861669684987Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113589082784890826Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113628257783481356Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113650328770509492Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113661356570613855Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113708094171081064Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113801611572016209Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114225661776256730Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114225661776256730Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114463003876854757Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114516587379978324Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114570858189818733Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114618516780185262Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114631940780319522Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115007819184078411Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115249438586494385Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115339058887390737Mouse
4141084Spqq1_msperm quality QTL 1 (mouse)Not determined5406567063319522Mouse
1302186Blmpf2_mbleomycin-induced pulmonary fibrosis 2 (mouse)Not determined115406567067078411Mouse
4142148Ckdbp2_mchronic kidney disease blood pressure locus 2 (mouse)Not determined115408094165103841Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115412675283733652Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5528498572209927Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115775466091754758Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115849055574754758Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15850803087695238Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5871926685066529Mouse
11532697Sluc36_msusceptibility to lung cancer 36 (mouse)115925661769482699Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116168682088699728Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116215600596156153Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162590826109390826Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001382823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001382824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_133208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_168576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001779891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001779892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936810 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936814 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936817 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_879525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_879527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_879531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB010319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB010330 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF281141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK029572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK046006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK133603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK134983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL627097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC117876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC117877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000005399   ⟹   ENSMUSP00000005399
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1162,604,113 - 62,619,919 (-)Ensembl
GRCm38.p6 Ensembl1162,713,287 - 62,729,093 (-)Ensembl
RefSeq Acc Id: ENSMUST00000127732
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1162,617,548 - 62,622,731 (-)Ensembl
GRCm38.p6 Ensembl1162,726,722 - 62,731,905 (-)Ensembl
RefSeq Acc Id: ENSMUST00000128370   ⟹   ENSMUSP00000117179
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1162,612,406 - 62,619,497 (-)Ensembl
GRCm38.p6 Ensembl1162,721,580 - 62,728,671 (-)Ensembl
RefSeq Acc Id: ENSMUST00000149228   ⟹   ENSMUSP00000114531
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1162,602,077 - 62,619,499 (-)Ensembl
GRCm38.p6 Ensembl1162,711,251 - 62,728,673 (-)Ensembl
RefSeq Acc Id: ENSMUST00000150336   ⟹   ENSMUSP00000121717
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1162,591,182 - 62,622,711 (-)Ensembl
GRCm38.p6 Ensembl1162,700,356 - 62,731,885 (-)Ensembl
RefSeq Acc Id: ENSMUST00000185656   ⟹   ENSMUSP00000141046
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1162,602,091 - 62,619,492 (-)Ensembl
GRCm38.p6 Ensembl1162,711,265 - 62,728,666 (-)Ensembl
RefSeq Acc Id: NM_001382823   ⟹   NP_001369752
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,591,191 - 62,622,722 (-)NCBI
GRCm381162,700,365 - 62,731,896 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001382824   ⟹   NP_001369753
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,612,080 - 62,622,722 (-)NCBI
GRCm381162,721,254 - 62,731,896 (-)NCBI
Sequence:
RefSeq Acc Id: NM_133208   ⟹   NP_573471
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,602,312 - 62,622,722 (-)NCBI
GRCm381162,711,486 - 62,731,896 (-)NCBI
MGSCv371162,524,988 - 62,542,595 (-)RGD
Celera1169,631,800 - 69,649,417 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_168576
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,620,281 - 62,622,722 (-)NCBI
GRCm381162,729,455 - 62,731,896 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156367   ⟹   XP_036012260
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,602,312 - 62,622,736 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156368   ⟹   XP_036012261
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,591,218 - 62,622,749 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156369   ⟹   XP_036012262
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,593,062 - 62,622,749 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001779891
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,583,270 - 62,622,749 (-)NCBI
GRCm381162,692,444 - 62,731,910 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001779892
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,583,270 - 62,622,749 (-)NCBI
GRCm381162,692,444 - 62,731,910 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004936807
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,583,275 - 62,622,749 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004936808
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,583,275 - 62,622,749 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004936809
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,583,270 - 62,622,749 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004936810
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,583,270 - 62,622,749 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004936811
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,583,270 - 62,622,749 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004936812
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,583,270 - 62,622,749 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004936813
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,596,403 - 62,622,749 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004936814
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,586,455 - 62,622,749 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004936815
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,591,218 - 62,622,749 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004936816
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,583,275 - 62,622,581 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004936817
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,583,270 - 62,622,749 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004936818
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,583,270 - 62,622,749 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004936819
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,583,270 - 62,622,749 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004936820
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,583,270 - 62,622,749 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004936821
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,583,270 - 62,622,749 (-)NCBI
Sequence:
RefSeq Acc Id: XR_879525
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,583,270 - 62,622,749 (-)NCBI
GRCm381162,692,444 - 62,731,910 (-)NCBI
Sequence:
RefSeq Acc Id: XR_879527
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,583,270 - 62,622,749 (-)NCBI
GRCm381162,692,444 - 62,731,910 (-)NCBI
Sequence:
RefSeq Acc Id: XR_879531
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391162,583,270 - 62,622,749 (-)NCBI
GRCm381162,692,444 - 62,731,912 (-)NCBI
Sequence:
RefSeq Acc Id: NP_573471   ⟸   NM_133208
- Peptide Label: isoform 1
- UniProtKB: Q8CDU3 (UniProtKB/Swiss-Prot),   Q9EQB9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001369752   ⟸   NM_001382823
- Peptide Label: isoform 2
- UniProtKB: Q3UZW0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001369753   ⟸   NM_001382824
- Peptide Label: isoform 3
- UniProtKB: Q3UY44 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000121717   ⟸   ENSMUST00000150336
RefSeq Acc Id: ENSMUSP00000141046   ⟸   ENSMUST00000185656
RefSeq Acc Id: ENSMUSP00000114531   ⟸   ENSMUST00000149228
RefSeq Acc Id: ENSMUSP00000117179   ⟸   ENSMUST00000128370
RefSeq Acc Id: ENSMUSP00000005399   ⟸   ENSMUST00000005399
RefSeq Acc Id: XP_036012261   ⟸   XM_036156368
- Peptide Label: isoform X2
- UniProtKB: Q3UZW0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036012262   ⟸   XM_036156369
- Peptide Label: isoform X2
- UniProtKB: Q3UZW0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036012260   ⟸   XM_036156367
- Peptide Label: isoform X1
Protein Domains
C2H2-type   KRAB   SCAN box

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9EQB9-F1-model_v2 AlphaFold Q9EQB9 1-759 view protein structure

Promoters
RGD ID:6822491
Promoter ID:MM_KWN:7842
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Lung,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000013072,   UC007JJT.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361162,545,034 - 62,545,534 (-)MPROMDB
RGD ID:8675004
Promoter ID:EPDNEW_M15533
Type:multiple initiation site
Name:Zfp287_1
Description:Mus musculus zinc finger protein 287 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381162,731,880 - 62,731,940EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2176561 AgrOrtholog
Ensembl Genes ENSMUSG00000005267 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000005399 ENTREZGENE
  ENSMUST00000005399.10 UniProtKB/TrEMBL
  ENSMUST00000128370 ENTREZGENE
  ENSMUST00000128370.2 UniProtKB/TrEMBL
  ENSMUST00000149228.8 UniProtKB/Swiss-Prot
  ENSMUST00000150336 ENTREZGENE
  ENSMUST00000150336.8 UniProtKB/TrEMBL
  ENSMUST00000185656.7 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.4020.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  6.10.140.140 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Classic Zinc Finger UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro KRAB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KRAB_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SCAN_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SCAN_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:170740 UniProtKB/Swiss-Prot
MGD MGI:2176561 ENTREZGENE
NCBI Gene 170740 ENTREZGENE
PANTHER KRAB-A DOMAIN-CONTAINING PROTEIN 2 UniProtKB/TrEMBL
  PR DOMAIN ZINC FINGER PROTEIN UniProtKB/TrEMBL
  PROTEIN ZBED8-RELATED UniProtKB/TrEMBL
  ZINC FINGER AND SCAN DOMAIN CONTAINING 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC FINGER AND SCAN DOMAIN-CONTAINING UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 200 UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 436 UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 833-RELATED UniProtKB/TrEMBL
Pfam KRAB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SCAN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-C2H2_6 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Zfp287 PhenoGen
PRINTS ZINCFINGER UniProtKB/TrEMBL
PROSITE KRAB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SCAN_BOX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART KRAB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SCAN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZnF_C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Retrovirus capsid dimerization domain-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF109640 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF57667 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B7ZC81_MOUSE UniProtKB/TrEMBL
  O88224_MOUSE UniProtKB/TrEMBL
  O88233_MOUSE UniProtKB/TrEMBL
  Q149B4_MOUSE UniProtKB/TrEMBL
  Q3UY44 ENTREZGENE, UniProtKB/TrEMBL
  Q3UZW0 ENTREZGENE, UniProtKB/TrEMBL
  Q5SVS9_MOUSE UniProtKB/TrEMBL
  Q8CDU3 ENTREZGENE
  Q9EQB9 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q8CDU3 UniProtKB/Swiss-Prot