Atad1 (ATPase family, AAA domain containing 1) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Atad1 (ATPase family, AAA domain containing 1) Mus musculus
Analyze
Symbol: Atad1
Name: ATPase family, AAA domain containing 1
RGD ID: 1318421
MGI Page MGI
Description: Enables ATP hydrolysis activity. Involved in learning or memory; negative regulation of glutamatergic synaptic transmission; and regulation of receptor internalization. Located in postsynaptic membrane. Is active in glutamatergic synapse and postsynapse. Is expressed in central nervous system; ganglia; renal cortex; submandibular gland primordium; and thymus primordium. Human ortholog(s) of this gene implicated in hyperekplexia 4. Orthologous to human ATAD1 (ATPase family AAA domain containing 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 4921525H23Rik; ATPase family AAA domain-containing protein 1; AW107648; outer mitochondrial transmembrane helix translocase; Tho; Thorase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm18818  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391932,649,958 - 32,717,187 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1932,649,038 - 32,717,186 (-)EnsemblGRCm39 Ensembl
GRCm381932,672,558 - 32,739,787 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1932,671,638 - 32,739,786 (-)EnsemblGRCm38mm10GRCm38
MGSCv371932,747,053 - 32,786,788 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361932,738,560 - 32,778,295 (-)NCBIMGSCv36mm8
Celera1933,455,381 - 33,495,118 (-)NCBICelera
Cytogenetic Map19C1NCBI
cM Map1927.55NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7671812   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273   PMID:15489334   PMID:15782199   PMID:16141072  
PMID:16141073   PMID:17208939   PMID:18614015   PMID:18799693   PMID:21267068   PMID:21496646   PMID:21873635   PMID:23665500   PMID:24843043   PMID:25253868   PMID:27113764   PMID:28103482  
PMID:28413018   PMID:29237760   PMID:29658368   PMID:30335684   PMID:30550785   PMID:32325033   PMID:32554809   PMID:33147468   PMID:36230952   PMID:36278411   PMID:36417873   PMID:37626842  


Genomics

Comparative Map Data
Atad1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391932,649,958 - 32,717,187 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1932,649,038 - 32,717,186 (-)EnsemblGRCm39 Ensembl
GRCm381932,672,558 - 32,739,787 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1932,671,638 - 32,739,786 (-)EnsemblGRCm38mm10GRCm38
MGSCv371932,747,053 - 32,786,788 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361932,738,560 - 32,778,295 (-)NCBIMGSCv36mm8
Celera1933,455,381 - 33,495,118 (-)NCBICelera
Cytogenetic Map19C1NCBI
cM Map1927.55NCBI
ATAD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381087,751,512 - 87,841,361 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1087,751,512 - 87,841,361 (-)EnsemblGRCh38hg38GRCh38
GRCh371089,511,269 - 89,577,983 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361089,502,855 - 89,567,897 (-)NCBINCBI36Build 36hg18NCBI36
Build 341089,502,854 - 89,567,897NCBI
Celera1083,259,379 - 83,324,398 (-)NCBICelera
Cytogenetic Map10q23.31NCBI
HuRef1083,148,033 - 83,212,913 (-)NCBIHuRef
CHM1_11089,795,178 - 89,860,216 (-)NCBICHM1_1
T2T-CHM13v2.01088,635,419 - 88,725,279 (-)NCBIT2T-CHM13v2.0
Atad1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81239,957,329 - 240,023,792 (-)NCBIGRCr8
mRatBN7.21230,544,227 - 230,610,524 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1230,544,047 - 230,596,548 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1238,919,429 - 238,964,037 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01245,849,131 - 245,893,739 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01238,687,243 - 238,731,853 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01251,234,702 - 251,386,996 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1251,235,508 - 251,387,002 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01258,466,598 - 258,500,477 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41236,682,640 - 236,726,705 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11236,847,840 - 236,898,593 (-)NCBI
Celera1227,659,669 - 227,703,783 (-)NCBICelera
Cytogenetic Map1q52NCBI
Atad1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554255,117,964 - 5,180,578 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554255,118,107 - 5,180,578 (+)NCBIChiLan1.0ChiLan1.0
ATAD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2899,770,305 - 99,836,126 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11099,775,621 - 99,841,442 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01084,473,087 - 84,544,902 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11087,981,974 - 88,071,098 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1087,981,974 - 88,048,228 (-)Ensemblpanpan1.1panPan2
ATAD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12637,749,799 - 37,811,490 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2637,750,649 - 37,794,149 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2637,632,673 - 37,694,311 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02639,280,736 - 39,342,518 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2639,280,736 - 39,325,158 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12637,187,145 - 37,248,760 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02636,769,037 - 36,830,700 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02638,008,503 - 38,070,239 (-)NCBIUU_Cfam_GSD_1.0
Atad1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721377,367,884 - 77,438,599 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367351,376,526 - 1,422,126 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367351,377,168 - 1,423,696 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ATAD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1499,815,203 - 99,885,160 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11499,802,939 - 99,885,562 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214108,795,831 - 108,887,914 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ATAD1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1981,197,332 - 81,285,279 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604841,858,621 - 41,925,226 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Atad1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462479113,869,934 - 13,919,470 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462479113,869,632 - 13,919,468 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Atad1
2601 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:405
Count of miRNA genes:309
Interacting mature miRNAs:350
Transcripts:ENSMUST00000070210
Prediction methods:Miranda
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142406Pbctlp1_mperipheral blood cytotoxic T lymphocyte percentage 1 (mouse)Not determined132875174Mouse
1300904Chab5_mcholesterol absorption 5 (mouse)Not determined19165376435653927Mouse
26884385Skwq14_mskull length QTL 14, 16 week (mouse)19325000035877400Mouse
1301800Faq10_mfluctuating asymmetry QTL 10 (mouse)Not determined19332321637323348Mouse
1300923Bits4_mbitterness sensitivity 4 (mouse)Not determined19332321637323348Mouse
1302126Skull26_mskull morphology 26 (mouse)Not determined19332321637323348Mouse
1300591Pas3_mpulmonary adenoma susceptibility 3 (mouse)Not determined19332321637323348Mouse
11039522Tbbr4_mTrypanosoma brucei brucei response 4 (mouse)19531332639313470Mouse
1301228Iba4_minduction of brown adipocytes 4 (mouse)Not determined19930571543305821Mouse
1302019Pgia23_mproteoglycan induced arthritis 23 (mouse)Not determined19978745343787602Mouse
14928311Manh85_mmandible shape 85 (mouse)191191478945914789Mouse
10413881Moe2_mmodifier of epilepsy 2 (mouse)191492301648923138Mouse
1301336Alcp23_malcohol preference locus 23 (mouse)Not determined191591260749912719Mouse
1301633Alcp24_malcohol preference locus 24 (mouse)Not determined191591260749912719Mouse
1302063Eae19_mexperimental allergic encephalomyelitis 19 (mouse)Not determined191829516252295381Mouse
1302004Lfp2_mlong free running period 2 (mouse)Not determined191829516252295381Mouse
4142343Moen2_mmodifier of engrailed QTL 2 (mouse)Not determined192023431454234461Mouse
10412251Mnp_mmodifier of Niemann Pick type C1 (mouse)Not determined192023431454234461Mouse
4141659Pbwg20_mpostnatal body weight growth 20 (mouse)Not determined192137870555378928Mouse
1357596Tgct3_mtesticular germ cell tumor 3 (mouse)Not determined192198409132912719Mouse
1558876W3q14_mweight 3 weeks QTL 14 (mouse)Not determined192231332653911504Mouse
12790634Ebm1_mEpidermolysis Bullosa modifier 1 (mouse)192498843958988439Mouse
1302123Tlsr8_mthymic lymphoma suppressor region 8 (mouse)Not determined192513600242388916Mouse
1301451Ath16_matherosclerosis 16 (mouse)Not determined192542691759427005Mouse
13506250Renmq1_mrenal mercury accumulation QTL 1 (mouse)192738559461385705Mouse
1357568Tgct4_mtesticular germ cell tumor 4 (mouse)Not determined192777198535295381Mouse
4141138Femwf11_mfemur work to failure 11 (mouse)Not determined2814034861420004Mouse
1300683Fembm7_mfemoral bone morphometry 7 (mouse)Not determined193014122461420004Mouse
1301942Pas13_mpulmonary adenoma susceptibility 13 (mouse)Not determined193014123161420004Mouse
1301410Cd8mts6_mCD8 memory T cell subset 6 (mouse)Not determined193014123161420004Mouse
1300856Nobq2_mNew Zealand obese QTL 2 (mouse)Not determined193089788061420004Mouse

Markers in Region
AW107648  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381932,672,856 - 32,672,966UniSTSGRCm38
MGSCv371932,747,346 - 32,747,456UniSTSGRCm37
Celera1933,455,674 - 33,455,784UniSTS
Cytogenetic Map19C3UniSTS
Whitehead/MRC_RH19320.86UniSTS
UniSTS:237922  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381932,672,937 - 32,673,143UniSTSGRCm38
MGSCv371932,747,427 - 32,747,633UniSTSGRCm37
Celera1933,455,755 - 33,455,961UniSTS
Cytogenetic Map19C3UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_026487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006527313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC162887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK007147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK014967 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK018102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK030719 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK075685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165953 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC029085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC043051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000070210   ⟹   ENSMUSP00000069962
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1932,650,222 - 32,717,186 (-)Ensembl
GRCm38.p6 Ensembl1932,672,822 - 32,739,786 (-)Ensembl
RefSeq Acc Id: ENSMUST00000235142   ⟹   ENSMUSP00000157972
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1932,650,222 - 32,717,183 (-)Ensembl
GRCm38.p6 Ensembl1932,672,822 - 32,739,783 (-)Ensembl
RefSeq Acc Id: ENSMUST00000235412   ⟹   ENSMUSP00000157842
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1932,649,038 - 32,689,731 (-)Ensembl
GRCm38.p6 Ensembl1932,671,638 - 32,712,331 (-)Ensembl
RefSeq Acc Id: ENSMUST00000236011   ⟹   ENSMUSP00000157772
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1932,650,222 - 32,717,186 (-)Ensembl
GRCm38.p6 Ensembl1932,672,822 - 32,739,786 (-)Ensembl
RefSeq Acc Id: ENSMUST00000236546
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1932,664,682 - 32,689,720 (-)Ensembl
GRCm38.p6 Ensembl1932,687,282 - 32,712,320 (-)Ensembl
RefSeq Acc Id: ENSMUST00000236701   ⟹   ENSMUSP00000157709
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1932,650,222 - 32,717,183 (-)Ensembl
GRCm38.p6 Ensembl1932,672,822 - 32,739,783 (-)Ensembl
RefSeq Acc Id: ENSMUST00000236985   ⟹   ENSMUSP00000158237
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1932,650,222 - 32,717,151 (-)Ensembl
GRCm38.p6 Ensembl1932,672,822 - 32,739,751 (-)Ensembl
RefSeq Acc Id: ENSMUST00000237752   ⟹   ENSMUSP00000157803
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1932,652,858 - 32,689,697 (-)Ensembl
GRCm38.p6 Ensembl1932,675,458 - 32,712,297 (-)Ensembl
RefSeq Acc Id: ENSMUST00000237933
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1932,675,504 - 32,678,993 (-)Ensembl
GRCm38.p6 Ensembl1932,698,104 - 32,701,593 (-)Ensembl
RefSeq Acc Id: ENSMUST00000238016
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1932,650,222 - 32,672,270 (-)Ensembl
GRCm38.p6 Ensembl1932,672,822 - 32,694,870 (-)Ensembl
RefSeq Acc Id: NM_026487   ⟹   NP_080763
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391932,649,963 - 32,689,698 (-)NCBI
GRCm381932,672,563 - 32,712,298 (-)NCBI
MGSCv371932,747,053 - 32,786,788 (-)RGD
Celera1933,455,381 - 33,495,118 (-)RGD
cM Map19 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006527313   ⟹   XP_006527376
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391932,649,958 - 32,717,187 (-)NCBI
GRCm381932,672,558 - 32,739,787 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_080763   ⟸   NM_026487
- UniProtKB: Q3U8V2 (UniProtKB/Swiss-Prot),   Q9D7A4 (UniProtKB/Swiss-Prot),   Q9D5T0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006527376   ⟸   XM_006527313
- Peptide Label: isoform X1
- UniProtKB: Q3U8V2 (UniProtKB/Swiss-Prot),   Q9D7A4 (UniProtKB/Swiss-Prot),   Q9D5T0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000157803   ⟸   ENSMUST00000237752
RefSeq Acc Id: ENSMUSP00000158237   ⟸   ENSMUST00000236985
RefSeq Acc Id: ENSMUSP00000069962   ⟸   ENSMUST00000070210
RefSeq Acc Id: ENSMUSP00000157709   ⟸   ENSMUST00000236701
RefSeq Acc Id: ENSMUSP00000157772   ⟸   ENSMUST00000236011
RefSeq Acc Id: ENSMUSP00000157972   ⟸   ENSMUST00000235142
RefSeq Acc Id: ENSMUSP00000157842   ⟸   ENSMUST00000235412
Protein Domains
AAA ATPase AAA+ lid   AAA+ ATPase   ATPase AAA-type core

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9D5T0-F1-model_v2 AlphaFold Q9D5T0 1-361 view protein structure

Promoters
RGD ID:13679274
Promoter ID:EPDNEW_M23786
Type:initiation region
Name:Atad1_1
Description:Mus musculus ATPase family, AAA domain containing 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381932,712,321 - 32,712,381EPDNEW
RGD ID:6829841
Promoter ID:MM_KWN:26860
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000070210,   UC008HFP.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361932,786,726 - 32,787,226 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1915229 AgrOrtholog
Ensembl Genes ENSMUSG00000013662 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000070210 ENTREZGENE
  ENSMUST00000070210.6 UniProtKB/Swiss-Prot
  ENSMUST00000235142.2 UniProtKB/TrEMBL
  ENSMUST00000235412 ENTREZGENE
  ENSMUST00000235412.2 UniProtKB/Swiss-Prot
  ENSMUST00000236011.2 UniProtKB/Swiss-Prot
  ENSMUST00000236701.2 UniProtKB/TrEMBL
  ENSMUST00000236985.2 UniProtKB/Swiss-Prot
  ENSMUST00000237752.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.8.60 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro AAA+_ATPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AAA_lid_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ATPase_AAA_core UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ATPase_AAA_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:67979 UniProtKB/Swiss-Prot
MGD MGI:1915229 ENTREZGENE
NCBI Gene 67979 ENTREZGENE
PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  OUTER MITOCHONDRIAL TRANSMEMBRANE HELIX TRANSLOCASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam AAA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AAA_lid_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Atad1 PhenoGen
PROSITE AAA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART AAA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A494B9L7_MOUSE UniProtKB/TrEMBL
  A0A494B9Y0_MOUSE UniProtKB/TrEMBL
  A0A494BAB5_MOUSE UniProtKB/TrEMBL
  ATAD1_MOUSE UniProtKB/Swiss-Prot
  Q3U8V2 ENTREZGENE
  Q9D5T0 ENTREZGENE
  Q9D7A4 ENTREZGENE
  Q9D9C1_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q3U8V2 UniProtKB/Swiss-Prot
  Q9D7A4 UniProtKB/Swiss-Prot