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Gene: Coch (cochlin) Mus musculus
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Symbol: Coch
Name: cochlin
Description: Predicted to have collagen binding activity. Involved in defense response to bacterium; positive regulation of innate immune response; and sensory perception of sound. Localizes to the extracellular matrix. Used to study autosomal dominant nonsyndromic deafness 9. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness 9. Is expressed in central nervous system; sensory organ; and vibrissa. Orthologous to human COCH (cochlin); INTERACTS WITH 2,2',4,4',5,5'-hexachlorobiphenyl; 2,2',5,5'-tetrachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AW122937; coagulation factor C homolog (Limulus polyphemus); Coch-5B2; D12H14S564E
Orthologs:
Homo sapiens (human) : COCH (cochlin)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Coch (cochlin)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Coch (cochlin)
Pan paniscus (bonobo/pygmy chimpanzee) : COCH (cochlin)
Canis lupus familiaris (dog) : COCH (cochlin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Coch (cochlin)
Sus scrofa (pig) : COCH (cochlin)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm38 Ensembl1251,593,341 - 51,605,771 (+)Ensembl
GRCm381251,593,283 - 51,606,619 (+)NCBIGRCm38GRCm38mm10GRCm38
MGSCv371252,694,442 - 52,706,760 (+)NCBIGRCm37mm9NCBIm37
MGSCv361252,515,075 - 52,527,393 (+)NCBImm8
Celera1252,896,581 - 52,909,012 (+)NCBICelera
Cytogenetic Map12 B3NCBI
cM Map1222.11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Additional Information

External Database Links
Nomenclature History
 
More on Coch
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1318366
Created: 2005-01-12
Species: Mus musculus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.