Asb3 (ankyrin repeat and SOCS box-containing 3) - Rat Genome Database

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Gene: Asb3 (ankyrin repeat and SOCS box-containing 3) Mus musculus
Analyze
Symbol: Asb3
Name: ankyrin repeat and SOCS box-containing 3
RGD ID: 1318244
MGI Page MGI
Description: Predicted to be involved in intracellular signal transduction. Is expressed in cerebral cortex; cerebral cortex ventricular layer; and trunk somite. Orthologous to human GPR75-ASB3 (GPR75-ASB3 readthrough) and ASB3 (ankyrin repeat and SOCS box containing 3).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2400011J03Rik; ankyrin repeat and SOCS box protein 3; ankyrin repeat and SOCS box-containing protein 3; ankyrin repeat-containing SOCS box protein 3; Asb-3
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391130,904,398 - 31,052,704 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1130,835,416 - 31,052,704 (+)EnsemblGRCm39 Ensembl
GRCm381130,954,392 - 31,102,704 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1130,885,416 - 31,102,704 (+)EnsemblGRCm38mm10GRCm38
MGSCv371130,854,398 - 31,002,704 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361130,854,463 - 31,001,470 (+)NCBIMGSCv36mm8
Celera1133,359,884 - 33,501,950 (+)NCBICelera
Cytogenetic Map11A4NCBI
cM Map1118.19NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11111040   PMID:11509662   PMID:12477932   PMID:14610273   PMID:16141072   PMID:16141073   PMID:18799693   PMID:20059953  
PMID:20211142   PMID:21267068   PMID:21677750  


Genomics

Comparative Map Data
Asb3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391130,904,398 - 31,052,704 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1130,835,416 - 31,052,704 (+)EnsemblGRCm39 Ensembl
GRCm381130,954,392 - 31,102,704 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1130,885,416 - 31,102,704 (+)EnsemblGRCm38mm10GRCm38
MGSCv371130,854,398 - 31,002,704 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361130,854,463 - 31,001,470 (+)NCBIMGSCv36mm8
Celera1133,359,884 - 33,501,950 (+)NCBICelera
Cytogenetic Map11A4NCBI
cM Map1118.19NCBI
ASB3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38253,669,980 - 53,786,953 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl253,532,672 - 53,860,160 (-)EnsemblGRCh38hg38GRCh38
GRCh37253,897,117 - 54,014,090 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36253,750,622 - 53,867,583 (-)NCBINCBI36Build 36hg18NCBI36
Build 34253,808,768 - 53,925,730NCBI
Celera253,737,972 - 53,854,933 (-)NCBICelera
Cytogenetic Map2p16.2NCBI
HuRef253,631,423 - 53,748,485 (-)NCBIHuRef
CHM1_1253,828,100 - 53,945,131 (-)NCBICHM1_1
T2T-CHM13v2.0253,666,238 - 53,783,156 (-)NCBIT2T-CHM13v2.0
Asb3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr814108,860,318 - 108,988,939 (+)NCBIGRCr8
mRatBN7.214104,659,406 - 104,788,032 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl14104,611,010 - 104,788,028 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx14109,005,605 - 109,096,776 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.014110,232,568 - 110,330,841 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.014106,704,999 - 106,803,271 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.014115,352,716 - 115,446,618 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl14115,391,609 - 115,446,152 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.014115,009,338 - 115,105,601 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.414112,086,518 - 112,175,471 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.114112,153,594 - 112,201,343 (+)NCBI
Celera14103,531,205 - 103,622,071 (+)NCBICelera
Cytogenetic Map14q22NCBI
Asb3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544119,425,621 - 19,510,723 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544119,427,843 - 19,511,583 (-)NCBIChiLan1.0ChiLan1.0
ASB3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21272,498,541 - 72,691,061 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A72,502,405 - 72,695,028 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A53,810,706 - 54,003,099 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A54,723,195 - 54,842,301 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A54,723,195 - 54,820,891 (-)Ensemblpanpan1.1panPan2
ASB3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11054,707,815 - 54,815,513 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1054,712,747 - 54,936,838 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1054,664,431 - 54,738,630 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01055,703,328 - 55,814,197 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1055,709,369 - 55,814,154 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11055,404,712 - 55,478,696 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01055,690,487 - 55,764,686 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01055,977,514 - 56,051,739 (-)NCBIUU_Cfam_GSD_1.0
LOC101959987
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629228,171,374 - 28,338,175 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936491230,769 - 400,705 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936491233,117 - 351,859 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ASB3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl387,389,873 - 87,500,602 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1387,389,835 - 87,501,179 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2392,549,246 - 92,657,488 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ASB3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11453,112,851 - 53,322,932 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604558,394,291 - 58,517,009 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Asb3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248337,833,327 - 7,964,708 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248337,830,519 - 7,964,723 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Asb3
4494 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1366
Count of miRNA genes:611
Interacting mature miRNAs:735
Transcripts:ENSMUST00000020551, ENSMUST00000117883, ENSMUST00000137306, ENSMUST00000148163, ENSMUST00000148808
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10044008Hbnr15_mHeligmosomoides bakeri nematode resistance 15 (mouse)Not determined1122705234227232Mouse
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1226863768500330Mouse
12801457Intmrm2_mintima/media ratio modifier 2 (mouse)111857861652578716Mouse
27226735Metcl16_mmetatarsal-calcaneal length 16, 16 week (mouse)11525000035090827Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
10412216Eae44_mexperimental allergic encephalomyelitis susceptibility 44 (mouse)Not determined111226863739950840Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111226863769684947Mouse
12910817Pwgrq20_mpost-weaning growth rate QTL 20 (mouse)112719805750636094Mouse
25394552Skmw69_mskeletal muscle weight 69, TA (mouse)112969902932329535Mouse
13524844Ppiq9_mprepulse inhibition QTL 9 (mouse)11904999735077325Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1226863768500330Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1226863768500330Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111226863768500330Mouse
12910801Pwbwq14_mpost-weaning body weight QTL 14 (mouse)112719805750636094Mouse
1300990Bits3_mbitterness sensitivity 3 (mouse)Not determined11837212142372260Mouse
12801460Intim2_mintima modifier 2 (mouse)111857861652578716Mouse
1301426Desp2_mdespair 2 (mouse)Not determined112870858162708700Mouse
1357844Si5lq5_mserum IGFBP-5 level QTL 5 (mouse)Not determined112816587362165976Mouse
27226798Scvln18_msacral vertebrae length 2, 16 week (mouse)11325000060690826Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11325000062890826Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111155000068490826Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111175000065990826Mouse
1300938Bulb3_mbulb size 3 (mouse)Not determined111857861652578716Mouse
13524848Ppiq7_mprepulse inhibition QTL 7 (mouse)112856914762569147Mouse
27095909Scvln6_msacral vertebrae length 2, 5 week (mouse)11325000044090827Mouse
27095904Scvln12_msacral vertebrae length 2, 10 week (mouse)11325000034495048Mouse
27226738Metcl11_mmetatarsal-calcaneal length 11, 10 week (mouse)11885000061390826Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111226863768500330Mouse
10044006Hbnr13_mHeligmosomoides bakeri nematode resistance 13 (mouse)Not determined112577262659772741Mouse
12910806Pwbwq15_mpost-weaning body weight QTL 15 (mouse)112719805750636094Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
1357518Tgyl1_mtriglyceride level 1 (mouse)Not determined11688027733916219Mouse
13463479Mchq19_mmean corpuscular hemoglobin QTL 19 (mouse)111095123244951464Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1226863768500330Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111226863768500330Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
14746971Manh70_mmandible shape 70 (mouse)111990589053905890Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111778196668500330Mouse
1300579Thypr1_mthymocyte proliferative response 1 (mouse)Not determined111928257753282715Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1226863768500330Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111226863768500330Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
1301814Bbaa7_mB.burgdorferi-associated arthritis 7 (mouse)Not determined112601178044264695Mouse
1300599Cocrb11_mcocaine related behavior 11 (mouse)Not determined11267035536671472Mouse
27226741Metcl5_mmetatarsal-calcaneal length 5, 5 week (mouse)11465000046290827Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111226863768500330Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111705617567078411Mouse
11522752Cocia18_mcocaine-induced activity, QTL 18 (mouse)113100820965008209Mouse
1302171Pgia28_mproteoglycan induced arthritis 28 (mouse)Not determined11890609742906218Mouse
13463472Mcvq15_mmean corpuscular volume QTL 15 (mouse)111095123244951464Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1226863768500330Mouse
12801459Leuf1_mleukocyte filtration 1 (mouse)111857861652578716Mouse
4141398Tgq22_mtriglyceride QTL 22 (mouse)Not determined2116340655163406Mouse
4141047Nilac1_mnicotine induced locomotor activity 1 (mouse)Not determined11901178043011942Mouse
1300607Tnbs2_mtri-nitrobenzene sulfonic acid susceptible 2 (mouse)Not determined112489805235126680Mouse
12910804Pwbwq16_mpost-weaning body weight QTL 16 (mouse)112719805750636094Mouse
12910818Ogrq5_moverall growth rate QTL 5 (mouse)112719805750636094Mouse

Markers in Region
UniSTS:236546  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381130,976,746 - 30,977,009UniSTSGRCm38
MGSCv371130,876,746 - 30,877,009UniSTSGRCm37
Celera1133,385,709 - 33,385,972UniSTS
Cytogenetic Map11A4UniSTS
cM Map1116.0UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000020551   ⟹   ENSMUSP00000020551
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1130,904,395 - 31,052,704 (+)Ensembl
GRCm38.p6 Ensembl1130,954,395 - 31,102,704 (+)Ensembl
RefSeq Acc Id: ENSMUST00000117883   ⟹   ENSMUSP00000113072
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1130,904,419 - 31,036,104 (+)Ensembl
GRCm38.p6 Ensembl1130,954,419 - 31,086,104 (+)Ensembl
RefSeq Acc Id: ENSMUST00000137306   ⟹   ENSMUSP00000114692
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1130,904,406 - 31,052,704 (+)Ensembl
GRCm38.p6 Ensembl1130,954,406 - 31,102,704 (+)Ensembl
RefSeq Acc Id: ENSMUST00000148163
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1130,904,448 - 30,979,760 (+)Ensembl
GRCm38.p6 Ensembl1130,954,448 - 31,029,760 (+)Ensembl
RefSeq Acc Id: ENSMUST00000148808
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1131,008,595 - 31,011,626 (+)Ensembl
GRCm38.p6 Ensembl1131,058,595 - 31,061,626 (+)Ensembl
RefSeq Acc Id: ENSMUST00000203878   ⟹   ENSMUSP00000144900
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1130,835,416 - 31,051,333 (+)Ensembl
GRCm38.p6 Ensembl1130,885,416 - 31,101,333 (+)Ensembl
RefSeq Acc Id: NM_023906   ⟹   NP_076395
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391130,904,398 - 31,052,704 (+)NCBI
GRCm381130,954,398 - 31,102,704 (+)NCBI
MGSCv371130,854,398 - 31,002,704 (+)RGD
Celera1133,359,884 - 33,501,950 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006514771   ⟹   XP_006514834
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391130,904,458 - 31,051,471 (+)NCBI
GRCm381130,954,413 - 31,101,471 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036156890   ⟹   XP_036012783
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391130,904,406 - 31,051,471 (+)NCBI
Sequence:
RefSeq Acc Id: NP_076395   ⟸   NM_023906
- UniProtKB: Q5SSV5 (UniProtKB/Swiss-Prot),   Q9WV72 (UniProtKB/Swiss-Prot),   Q8R5B4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514834   ⟸   XM_006514771
- Peptide Label: isoform X1
- UniProtKB: Q5SSV5 (UniProtKB/Swiss-Prot),   Q9WV72 (UniProtKB/Swiss-Prot),   Q8R5B4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000144900   ⟸   ENSMUST00000203878
RefSeq Acc Id: ENSMUSP00000020551   ⟸   ENSMUST00000020551
RefSeq Acc Id: ENSMUSP00000114692   ⟸   ENSMUST00000137306
RefSeq Acc Id: ENSMUSP00000113072   ⟸   ENSMUST00000117883
RefSeq Acc Id: XP_036012783   ⟸   XM_036156890
- Peptide Label: isoform X2
Protein Domains
SOCS box

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9WV72-F1-model_v2 AlphaFold Q9WV72 1-525 view protein structure

Promoters
RGD ID:6820446
Promoter ID:MM_KWN:6843
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day2,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Lung,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000011934,   OTTMUST00000011935,   OTTMUST00000011952,   OTTMUST00000011953,   UC007IID.1,   UC007IIE.1,   UC007IIG.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361130,854,209 - 30,854,709 (+)MPROMDB
RGD ID:8674202
Promoter ID:EPDNEW_M15132
Type:initiation region
Name:Asb3_1
Description:Mus musculus ankyrin repeat and SOCS box-containing 3 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15133  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381130,954,458 - 30,954,518EPDNEW
RGD ID:8674254
Promoter ID:EPDNEW_M15133
Type:single initiation site
Name:Asb3_2
Description:Mus musculus ankyrin repeat and SOCS box-containing 3 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15132  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381130,972,239 - 30,972,299EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1929749 AgrOrtholog
Ensembl Genes ENSMUSG00000020305 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000020551 ENTREZGENE
  ENSMUST00000020551.13 UniProtKB/Swiss-Prot
  ENSMUST00000117883.2 UniProtKB/TrEMBL
  ENSMUST00000137306.8 UniProtKB/TrEMBL
  ENSMUST00000203878 ENTREZGENE
  ENSMUST00000203878.3 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SOCS box UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ASB3_SOCS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SOCS_box UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SOCS_box-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:65257 UniProtKB/Swiss-Prot
MGD MGI:1929749 ENTREZGENE
NCBI Gene 65257 ENTREZGENE
PANTHER ADA2A-CONTAINING COMPLEX COMPONENT 3, ISOFORM D UniProtKB/TrEMBL
  ANKYRIN REPEAT AND SOCS BOX PROTEIN 3 UniProtKB/Swiss-Prot
  ANKYRIN REPEAT PROTEIN UniProtKB/TrEMBL
  MOLTING PROTEIN MLT-4 UniProtKB/Swiss-Prot
Pfam Ank UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ank_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ank_4 UniProtKB/TrEMBL
  SOCS_box UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Asb3 PhenoGen
PRINTS ANKYRIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SOCS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ANK UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SOCS_box UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF158235 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48403 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0N4SV07_MOUSE UniProtKB/TrEMBL
  A8Y5I6_MOUSE UniProtKB/TrEMBL
  ASB3_MOUSE UniProtKB/Swiss-Prot
  D6RDR7_MOUSE UniProtKB/TrEMBL
  Q5SSV5 ENTREZGENE
  Q8R5B4 ENTREZGENE, UniProtKB/TrEMBL
  Q9CWX6_MOUSE UniProtKB/TrEMBL
  Q9WV72 ENTREZGENE
UniProt Secondary Q5SSV5 UniProtKB/Swiss-Prot