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Gene: HOXD13 (homeobox D13) Homo sapiens
Symbol: HOXD13
Name: homeobox D13
Description: Exhibits DNA binding activity and DNA-binding transcription activator activity, RNA polymerase II-specific. Involved in positive regulation of transcription by RNA polymerase II. Localizes to the nucleoplasm. Implicated in brachydactyly (multiple); brachydactyly-syndactyly syndrome; clubfoot; and cryptorchidism.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: BDE; BDSD; homeo box 4I; homeo box D13; homeobox protein Hox-4I; homeobox protein Hox-D13; HOX4I; SPD; SPD1; synpolydactyly
Mus musculus (house mouse) : Hoxd13 (homeobox D13)  MGI  Alliance
Rattus norvegicus (Norway rat) : Hoxd13 (homeo box D13)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hoxd13 (homeobox D13)
Pan paniscus (bonobo/pygmy chimpanzee) : HOXD13 (homeobox D13)
Canis lupus familiaris (dog) : HOXD13 (homeobox D13)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hoxd13 (homeobox D13)
Sus scrofa (pig) : HOXD13 (homeobox D13)
Chlorocebus sabaeus (green monkey) : HOXD13 (homeobox D13)
Heterocephalus glaber (naked mole-rat) : Hoxd13 (homeobox D13)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Human AssemblyChrPosition (strand)SourceGenome Browsers
GRCh38 Ensembl2176,092,721 - 176,095,944 (+)Ensembl
GRCh382176,087,487 - 176,095,944 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh372176,957,532 - 176,960,666 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362176,665,778 - 176,668,912 (+)NCBINCBI36hg18NCBI36
Build 342176,783,038 - 176,785,307NCBI
Celera2170,566,680 - 170,569,816 (+)NCBI
Cytogenetic Map2q31.1NCBI
HuRef2168,835,017 - 168,838,150 (+)NCBIHuRef
CHM1_12176,963,384 - 176,966,518 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Phenotype Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences
Clinical Variants

Additional Information

External Database Links
More on HOXD13
Alliance Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1318172
Created: 2005-01-12
Species: Homo sapiens
Last Modified: 2019-12-25
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.