Cdc7 (cell division cycle 7 (S. cerevisiae)) - Rat Genome Database

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Gene: Cdc7 (cell division cycle 7 (S. cerevisiae)) Mus musculus
Analyze
Symbol: Cdc7
Name: cell division cycle 7 (S. cerevisiae)
RGD ID: 1318071
MGI Page MGI
Description: Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in several processes, including double-strand break repair via break-induced replication; peptidyl-serine phosphorylation; and positive regulation of cell cycle process. Predicted to act upstream of or within cell division and phosphorylation. Predicted to be located in intercellular bridge; mitotic spindle; and nucleoplasm. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including gut; hemolymphoid system gland; musculature; nervous system; and sensory organ. Orthologous to human CDC7 (cell division cycle 7); PARTICIPATES IN cell cycle pathway, mitotic; INTERACTS WITH 1,1-dichloroethene; 1,2-dimethylhydrazine; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AI597260; CDC7-related kinase; Cdc7l; Cdc7l1; cell division cycle 7-like 1; cell division cycle 7-related protein kinase; MGC91067; muCdc7
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395107,112,174 - 107,132,306 (+)NCBIGRCm39mm39
GRCm39 Ensembl5107,112,188 - 107,132,298 (+)Ensembl
GRCm385106,964,315 - 106,984,440 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5106,964,322 - 106,984,432 (+)EnsemblGRCm38mm10GRCm38
MGSCv375107,393,341 - 107,413,450 (+)NCBIGRCm37mm9NCBIm37
MGSCv365107,204,624 - 107,224,733 (+)NCBImm8
Celera5104,076,218 - 104,096,189 (+)NCBICelera
Cytogenetic Map5E5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-citrinin  (ISO)
1,1-dichloroethene  (EXP)
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-methylcholine  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4-(ethoxymethylene)-2-phenyloxazol-5-one  (EXP)
4-nitroquinoline N-oxide  (EXP)
acetamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (ISO)
antirheumatic drug  (ISO)
aristolochic acid  (ISO)
arsenous acid  (ISO)
azathioprine  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bisphenol A  (ISO)
carbamazepine  (ISO)
celastrol  (ISO)
chromium(6+)  (EXP)
cisplatin  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
diarsenic trioxide  (ISO)
diazinon  (ISO)
dibutyl phthalate  (EXP)
diclofenac  (ISO)
dieldrin  (ISO)
dioxygen  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
Enterolactone  (ISO)
gedunin  (ISO)
geraniol  (ISO)
glyphosate  (ISO)
GW 4064  (ISO)
hydrogen peroxide  (ISO)
Lasiocarpine  (ISO)
lithium chloride  (ISO)
monocrotaline  (ISO)
N-(6-acetamidohexyl)acetamide  (EXP)
nickel atom  (ISO)
nickel dichloride  (ISO)
ochratoxin A  (ISO)
phenylmercury acetate  (ISO)
picoxystrobin  (ISO)
quercetin  (ISO)
quinolin-8-ol  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
silver(1+) nitrate  (ISO)
sodium arsenite  (ISO)
succimer  (EXP)
sunitinib  (ISO)
thapsigargin  (ISO)
thioacetamide  (ISO)
toluene 2,4-diisocyanate  (EXP)
trichostatin A  (ISO)
trimellitic anhydride  (EXP)
triptonide  (EXP)
troglitazone  (ISO)
tunicamycin  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA,ISO)
intercellular bridge  (ISO)
mitotic spindle  (ISO)
nucleoplasm  (ISO)
nucleus  (IBA,ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:8048955   PMID:9722556   PMID:10199953   PMID:10349636   PMID:10517317   PMID:11042159   PMID:11076861   PMID:11739743   PMID:11980714   PMID:12466851   PMID:12477932   PMID:12520002  
PMID:12904583   PMID:14517263   PMID:16141072   PMID:16141073   PMID:17046832   PMID:18799693   PMID:21267068   PMID:21565611   PMID:21677750   PMID:21873635   PMID:22223649   PMID:24133205  
PMID:27401717   PMID:27694478   PMID:27757957   PMID:28887320   PMID:32325033   PMID:32548123   PMID:33230114  


Genomics

Comparative Map Data
Cdc7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395107,112,174 - 107,132,306 (+)NCBIGRCm39mm39
GRCm39 Ensembl5107,112,188 - 107,132,298 (+)Ensembl
GRCm385106,964,315 - 106,984,440 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5106,964,322 - 106,984,432 (+)EnsemblGRCm38mm10GRCm38
MGSCv375107,393,341 - 107,413,450 (+)NCBIGRCm37mm9NCBIm37
MGSCv365107,204,624 - 107,224,733 (+)NCBImm8
Celera5104,076,218 - 104,096,189 (+)NCBICelera
Cytogenetic Map5E5NCBI
CDC7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl191,500,851 - 91,525,764 (+)EnsemblGRCh38hg38GRCh38
GRCh38191,498,968 - 91,525,764 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37191,966,408 - 91,991,321 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36191,739,032 - 91,763,902 (+)NCBINCBI36hg18NCBI36
Build 34191,678,464 - 91,703,334NCBI
Celera190,213,111 - 90,238,021 (+)NCBI
Cytogenetic Map1p22.2-p22.1NCBI
HuRef190,085,053 - 90,109,963 (+)NCBIHuRef
CHM1_1192,081,241 - 92,106,165 (+)NCBICHM1_1
Cdc7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2142,804,660 - 2,824,796 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl142,804,661 - 2,824,778 (-)Ensembl
Rnor_6.0143,826,658 - 3,846,891 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl143,826,659 - 3,846,891 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0143,823,736 - 3,843,969 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4143,421,621 - 3,441,738 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1143,422,647 - 3,441,061 (-)NCBI
Celera142,820,133 - 2,840,304 (-)NCBICelera
Cytogenetic Map14p22NCBI
Cdc7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554232,902,048 - 2,924,573 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554232,902,352 - 2,923,743 (-)NCBIChiLan1.0ChiLan1.0
CDC7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1192,902,323 - 92,927,203 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl192,902,631 - 92,927,203 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0194,158,628 - 94,183,537 (+)NCBIMhudiblu_PPA_v0panPan3
CDC7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1657,336,165 - 57,362,478 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl657,337,407 - 57,362,757 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha660,041,727 - 60,068,018 (-)NCBI
ROS_Cfam_1.0657,719,521 - 57,745,854 (-)NCBI
UMICH_Zoey_3.1657,395,417 - 57,421,700 (-)NCBI
UNSW_CanFamBas_1.0657,370,751 - 57,397,009 (-)NCBI
UU_Cfam_GSD_1.0657,834,393 - 57,860,883 (-)NCBI
Cdc7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405058101,432,750 - 101,504,358 (+)NCBI
SpeTri2.0NW_0049365377,445,882 - 7,515,196 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CDC7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4125,417,098 - 125,475,251 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14125,431,454 - 125,459,367 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24136,912,609 - 136,938,483 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CDC7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12041,714,250 - 41,739,159 (-)NCBI
ChlSab1.1 Ensembl2041,715,572 - 41,739,138 (-)Ensembl
Vero_WHO_p1.0NW_02366603376,257,292 - 76,282,191 (+)NCBI
Cdc7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247426,211,095 - 6,302,369 (-)NCBI

Position Markers
AI597260  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385106,984,120 - 106,984,216UniSTSGRCm38
MGSCv375107,413,139 - 107,413,235UniSTSGRCm37
Celera5104,095,878 - 104,095,974UniSTS
Cytogenetic Map5EUniSTS
Whitehead/MRC_RH51299.89UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11341716Rvfs3_mRift Valley fever susceptibility 3 (mouse)526236236138457140Mouse
1301524Lmb2_mlupus in MRL and B6 F2 cross (mouse)Not determined537424144112317856Mouse
11041665Lmr24_mleishmaniasis resistance 24 (mouse)552537120107173175Mouse
11041899Lmr24a_mleishmaniasis resistance 24a (mouse)552537120107173175Mouse
4142064Tmc1m4_mTmc1 modifier 4 (mouse)Not determined554342835126924008Mouse
4142317Rgcs1_mretinal ganglion cell susceptible 1 (mouse)Not determined55230992108614761Mouse
26884395Humsd2_mhumerus midshaft diameter 2, 10 week (mouse)569900000132500000Mouse
27226719Tibw6_mtibia width 6, proximal, 16 week (mouse)572700000140000000Mouse
13506928Recrq8_mrecombination rate in male meiosis QTL 8 (mouse)574300000132500000Mouse
25314315Mlh1fc4_mMLH1 foci count 4 (mouse)574300000132500000Mouse
1357431Cia27_mcollagen induced arthritis 27 (mouse)Not determined575154687119880564Mouse
4141438Skmw13_mskeletal muscle weight 13 (mouse)Not determined576042404110042620Mouse
4141505Chlq14_mcirculating hormone level QTL 14 (mouse)Not determined576132927110133058Mouse
1301691Cdcs10_mcytokine deficiency colitis susceptibility 10 (mouse)Not determined576132927110133058Mouse
1300986Hdlq2_mHDL QTL 2 (mouse)Not determined576132927110133058Mouse
1300931Cocrb6_mcocaine related behavior 6 (mouse)Not determined576297205110297366Mouse
1301829Thyls2_mthymic lymphoma susceptibility 2 (mouse)Not determined576297205110297366Mouse
1301713Dbsty2_mdiabesity 2 (mouse)Not determined576297205110297366Mouse
13464249Ahl16_mage related hearing loss, early onset 16 (mouse)576297205110297366Mouse
10401246Bglu13_mblood glucose level 13 (mouse)Not determined579391781113391927Mouse
10755524Mono1_mmonocyte differential 1 (mouse)580701400114701400Mouse
1301419Cypr3_mcytokine production 3 (mouse)Not determined580871790114871944Mouse
10401245Bglu18_mblood glucose level 18 (mouse)Not determined582690609116690738Mouse
13464242Ahl17_mage related hearing loss, early onset 17 (mouse)582690609116690738Mouse
1300801Drb2_mdopamine receptor binding 2 (mouse)Not determined587239005121239199Mouse
1301399Cpfd3_mcerebellum pattern fissures (mouse)Not determined587239005121239199Mouse
1301126Bwem1_mbody weight day 30 males 1 (mouse)Not determined587239005121239199Mouse
10043958Chldq12_mcholesterol and HDL QTL 12 (mouse)Not determined587239005121239199Mouse
13464241Ahl18_mage related hearing loss, early onset 18 (mouse)587239005121239199Mouse
1357725Eae39_mexperimental allergic encephalomyelitis 39 (mouse)Not determined589271017118725963Mouse
1300968Skts4_mskin tumor susceptibility 4 (mouse)Not determined589271017124100176Mouse
1301362Prnr1_mprion resistance 1 (mouse)Not determined589271017146851125Mouse
11049562Lmr24f_mleishmaniasis resistance 24f (mouse)590173096124173175Mouse
1301457Cfsw2_mcystic fibrosis survival to weaning 2 (mouse)Not determined590413140124413285Mouse
1300993Hycdc_mhypercapnic duty cycle (mouse)Not determined590413140124413285Mouse
9587780Afw16_mabdominal fat weight QTL 16 (mouse)Not determined592682300126682419Mouse
1301974Chab7_mcholesterol absorption 7 (mouse)Not determined595085348129085464Mouse
1357644Egrd1_mearly growth rate, direct effect 1 (mouse)Not determined595286714129286920Mouse
1558774Lith17_mlithogenic gene 17 (mouse)Not determined595317683129317856Mouse
10402486Dipa1_mdrug induced psychomotor activation 1 (mouse)Not determined595317683129317856Mouse
13464244Ahl19_mage related hearing loss, early onset 19 (mouse)595317683129317856Mouse
1300940Actd3_mactivity-distance traveled 3 (mouse)Not determined596172519130172667Mouse
1300659Pcd8ts1_mp-glycoprotein positive CD8 T cell subset 1 (mouse)Not determined596883692130883925Mouse
1301858Smdq1_msegregation of mitochondrial DNA QTL 1 (mouse)Not determined596883692130883925Mouse
10045978Tir10_mtrypanosome infection response 10 (mouse)Not determined597871790113883925Mouse
1301042Elmaz1_melevated maze behavior 1 (mouse)Not determined597871790116738565Mouse
1301877Bbaa3_mB.burgdorferi-associated arthritis 3 (mouse)Not determined599307426112317856Mouse
4141519Hmtb5_mhemostasis and thrombosis bleeding time 5 (mouse)Not determined99801563126805880Mouse
12904945Tammq2_mtibialis anterior muscle mass QTL 2 (mouse)5100527900134527900Mouse
12904959Smmq1_msoleus muscle mass QTL 1 (mouse)5100527900134527900Mouse
12859290Criq2_mCitrobacter rodentium infection QTL 2 (mouse)5101194514135194514Mouse
1301624Aevm2_mautoimmune extremity vasculitis in MRL mice 2 (mouse)Not determined5101725767135725963Mouse
14746986Manh58_mmandible shape 58 (mouse)5102308218136308218Mouse
11532736Sluc33b_msusceptibility to lung cancer 33b (mouse)5102806972136807131Mouse
25314310Syncl4_msynaptonemal complex length 4 (mouse)5102900000115400000Mouse
25314317Sccor3_msynaptonemal complex length to mean MLH1 count ratio 3 (mouse)5104200000114600000Mouse
11528550Sluc33_msusceptibility to lung cancer 33 (mouse)5104239005120573921Mouse
1357886Diht_mdopamine-induced hypothermia (mouse)Not determined5104350872114963481Mouse
10412202Bbaa26_mB.burgdorferi-associated arthritis 26 (mouse)Not determined5104435822138557193Mouse
10412239Alpq7_malcohol preference QTL 7 (mouse)Not determined5104567876138567876Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1981
Count of miRNA genes:551
Interacting mature miRNAs:669
Transcripts:ENSMUST00000031221, ENSMUST00000076467, ENSMUST00000117196, ENSMUST00000118261, ENSMUST00000123546, ENSMUST00000129938, ENSMUST00000140378
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001271566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001271567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001271568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_009863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006534737 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB018574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB018575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB018576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB018577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB019388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC134409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ007661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK146009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC062149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC072666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC080702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000031221   ⟹   ENSMUSP00000031221
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5107,112,188 - 107,132,298 (+)Ensembl
GRCm38.p6 Ensembl5106,964,322 - 106,984,432 (+)Ensembl
RefSeq Acc Id: ENSMUST00000076467   ⟹   ENSMUSP00000075792
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5107,112,247 - 107,132,298 (+)Ensembl
GRCm38.p6 Ensembl5106,964,381 - 106,984,432 (+)Ensembl
RefSeq Acc Id: ENSMUST00000117196   ⟹   ENSMUSP00000112392
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5107,112,188 - 107,132,297 (+)Ensembl
GRCm38.p6 Ensembl5106,964,322 - 106,984,431 (+)Ensembl
RefSeq Acc Id: ENSMUST00000118261   ⟹   ENSMUSP00000113385
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5107,112,427 - 107,132,297 (+)Ensembl
GRCm38.p6 Ensembl5106,964,561 - 106,984,431 (+)Ensembl
RefSeq Acc Id: ENSMUST00000123546
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5107,123,104 - 107,127,189 (+)Ensembl
GRCm38.p6 Ensembl5106,975,238 - 106,979,323 (+)Ensembl
RefSeq Acc Id: ENSMUST00000129938   ⟹   ENSMUSP00000119612
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5107,112,884 - 107,131,221 (+)Ensembl
GRCm38.p6 Ensembl5106,965,018 - 106,983,355 (+)Ensembl
RefSeq Acc Id: ENSMUST00000140378
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5107,112,258 - 107,132,298 (+)Ensembl
GRCm38.p6 Ensembl5106,964,392 - 106,984,432 (+)Ensembl
RefSeq Acc Id: ENSMUST00000199223
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5107,122,412 - 107,123,058 (+)Ensembl
GRCm38.p6 Ensembl5106,974,546 - 106,975,192 (+)Ensembl
RefSeq Acc Id: NM_001271566   ⟹   NP_001258495
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395107,112,427 - 107,132,305 (+)NCBI
GRCm385106,964,561 - 106,984,439 (+)NCBI
Celera5104,076,218 - 104,096,197 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001271567   ⟹   NP_001258496
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395107,112,188 - 107,132,305 (+)NCBI
GRCm385106,964,322 - 106,984,439 (+)NCBI
Celera5104,076,218 - 104,096,197 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001271568   ⟹   NP_001258497
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395107,112,188 - 107,132,305 (+)NCBI
GRCm385106,964,322 - 106,984,439 (+)NCBI
Celera5104,076,218 - 104,096,197 (+)NCBI
Sequence:
RefSeq Acc Id: NM_009863   ⟹   NP_033993
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395107,112,188 - 107,132,305 (+)NCBI
GRCm385106,964,322 - 106,984,439 (+)NCBI
MGSCv375107,393,341 - 107,413,450 (+)RGD
Celera5104,076,218 - 104,096,197 (+)NCBI
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006534737   ⟹   XP_006534800
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395107,112,174 - 107,132,306 (+)NCBI
GRCm385106,964,315 - 106,984,440 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017320634   ⟹   XP_017176123
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395107,112,179 - 107,132,306 (+)NCBI
GRCm385106,964,315 - 106,984,440 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030254089   ⟹   XP_030109949
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395107,112,412 - 107,132,306 (+)NCBI
GRCm385106,964,551 - 106,984,440 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_033993   ⟸   NM_009863
- Peptide Label: isoform 1
- UniProtKB: Q9Z0H0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001258496   ⟸   NM_001271567
- Peptide Label: isoform 2
- UniProtKB: Q9Z0H0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001258497   ⟸   NM_001271568
- Peptide Label: isoform 3
- UniProtKB: Q9Z0H0 (UniProtKB/Swiss-Prot),   Q66JY4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001258495   ⟸   NM_001271566
- Peptide Label: isoform 1
- UniProtKB: Q9Z0H0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006534800   ⟸   XM_006534737
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017176123   ⟸   XM_017320634
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_030109949   ⟸   XM_030254089
- Peptide Label: isoform X1
RefSeq Acc Id: ENSMUSP00000113385   ⟸   ENSMUST00000118261
RefSeq Acc Id: ENSMUSP00000031221   ⟸   ENSMUST00000031221
RefSeq Acc Id: ENSMUSP00000075792   ⟸   ENSMUST00000076467
RefSeq Acc Id: ENSMUSP00000119612   ⟸   ENSMUST00000129938
RefSeq Acc Id: ENSMUSP00000112392   ⟸   ENSMUST00000117196
Protein Domains
Protein kinase

Promoters
RGD ID:6887404
Promoter ID:EPDNEW_M7153
Type:initiation region
Name:Cdc7_1
Description:Mus musculus cell division cycle 7 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm385106,964,369 - 106,964,429EPDNEW
RGD ID:6837234
Promoter ID:MM_KWN:43217
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000031219,   ENSMUST00000117196,   ENSMUST00000118261,   OTTMUST00000069671,   OTTMUST00000069672,   OTTMUST00000069674,   OTTMUST00000069676
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365107,393,136 - 107,393,636 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1309511 AgrOrtholog
Ensembl Genes ENSMUSG00000029283 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000031221 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000075792 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000112392 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000113385 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000119612 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000031221 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000076467 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000117196 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000118261 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000129938 UniProtKB/TrEMBL
InterPro Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:12545 UniProtKB/Swiss-Prot
MGD MGI:1309511 ENTREZGENE
NCBI Gene 12545 ENTREZGENE
Pfam Pkinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cdc7 PhenoGen
PROSITE PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART S_TKc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt CDC7_MOUSE UniProtKB/Swiss-Prot
  G3UVV7_MOUSE UniProtKB/TrEMBL
  Q3TQ50_MOUSE UniProtKB/TrEMBL
  Q66JY4 ENTREZGENE, UniProtKB/TrEMBL
  Q9CSF4_MOUSE UniProtKB/TrEMBL
  Q9Z0H0 ENTREZGENE
  Q9Z2Y5_MOUSE UniProtKB/TrEMBL
  Q9Z2Y6_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q9WUV1 UniProtKB/Swiss-Prot
  Q9Z2Y7 UniProtKB/Swiss-Prot