Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: CTSF (cathepsin F) Homo sapiens
Analyze
Symbol: CTSF
Name: cathepsin F
RGD ID: 1317809
Description: Predicted to have cysteine-type endopeptidase activity. Predicted to be involved in proteolysis involved in cellular protein catabolic process. Localizes to collagen-containing extracellular matrix and extracellular exosome. Implicated in neuronal ceroid lipofuscinosis 13.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: CATSF; CLN13
Orthologs:
Mus musculus (house mouse) : Ctsf (cathepsin F)  MGI  Alliance
Rattus norvegicus (Norway rat) : Ctsf (cathepsin F)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ctsf (cathepsin F)
Pan paniscus (bonobo/pygmy chimpanzee) : CTSF (cathepsin F)
Canis lupus familiaris (dog) : CTSF (cathepsin F)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ctsf (cathepsin F)
Sus scrofa (pig) : CTSF (cathepsin F)
Chlorocebus sabaeus (African green monkey) : CTSF (cathepsin F)
Heterocephalus glaber (naked mole-rat) : Ctsf (cathepsin F)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1166,563,464 - 66,568,841 (-)EnsemblGRCh38hg38GRCh38
GRCh381166,563,463 - 66,568,606 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371166,330,935 - 66,336,047 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361166,087,511 - 66,092,623 (-)NCBINCBI36hg18NCBI36
Build 341166,087,515 - 66,092,623NCBI
Celera1163,651,214 - 63,656,324 (-)NCBI
Cytogenetic Map11q13.2NCBI
HuRef1162,658,849 - 62,663,961 (-)NCBIHuRef
CHM1_11166,214,668 - 66,219,780 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
 
More on CTSF
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1317809
Created: 2005-01-12
Species: Homo sapiens
Last Modified: 2020-09-16
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.