Golga5 (golgi autoantigen, golgin subfamily a, 5) - Rat Genome Database

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Gene: Golga5 (golgi autoantigen, golgin subfamily a, 5) Mus musculus
Analyze
Symbol: Golga5
Name: golgi autoantigen, golgin subfamily a, 5
RGD ID: 1317780
MGI Page MGI
Description: Predicted to enable protein homodimerization activity; protein-macromolecule adaptor activity; and small GTPase binding activity. Predicted to be involved in Golgi organization and retrograde transport, vesicle recycling within Golgi. Located in Golgi membrane. Is expressed in several structures, including alimentary system; central nervous system; limb bud; liver; and spleen. Orthologous to human GOLGA5 (golgin A5).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: golgi autoantigen golgin subfamily a5; Golgin subfamily A member 5; golgin-84; MGC102087; protein Sumiko; Ret; Ret-II
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912102,435,372 - 102,464,274 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl12102,435,394 - 102,464,166 (+)EnsemblGRCm39 Ensembl
GRCm3812102,469,109 - 102,498,015 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12102,469,135 - 102,497,907 (+)EnsemblGRCm38mm10GRCm38
MGSCv3712103,708,120 - 103,736,117 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3612102,870,242 - 102,898,957 (+)NCBIMGSCv36mm8
Celera12103,681,112 - 103,708,985 (+)NCBICelera
Cytogenetic Map12ENCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Detection of a novel type of RET rearrangement (PTC5) in thyroid carcinomas after Chernobyl and analysis of the involved RET-fused gene RFG5. Klugbauer S, etal., Cancer Res. 1998 Jan 15;58(2):198-203.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:9915833   PMID:10349636   PMID:10486565   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12520002   PMID:14610273   PMID:15102471  
PMID:15489334   PMID:16141072   PMID:16141073   PMID:16602821   PMID:18562289   PMID:18799693   PMID:21677750   PMID:21873635   PMID:24194600   PMID:24368089   PMID:28509431   PMID:30550785  
PMID:32554809  


Genomics

Comparative Map Data
Golga5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912102,435,372 - 102,464,274 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl12102,435,394 - 102,464,166 (+)EnsemblGRCm39 Ensembl
GRCm3812102,469,109 - 102,498,015 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12102,469,135 - 102,497,907 (+)EnsemblGRCm38mm10GRCm38
MGSCv3712103,708,120 - 103,736,117 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3612102,870,242 - 102,898,957 (+)NCBIMGSCv36mm8
Celera12103,681,112 - 103,708,985 (+)NCBICelera
Cytogenetic Map12ENCBI
GOLGA5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381492,794,305 - 92,839,947 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1492,794,305 - 92,839,947 (+)EnsemblGRCh38hg38GRCh38
GRCh371493,260,650 - 93,306,292 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361492,330,403 - 92,376,057 (+)NCBINCBI36Build 36hg18NCBI36
Build 341492,330,402 - 92,376,057NCBI
Celera1473,314,759 - 73,360,445 (+)NCBICelera
Cytogenetic Map14q32.12ENTREZGENE
HuRef1473,443,587 - 73,489,353 (+)NCBIHuRef
CHM1_11493,198,767 - 93,244,558 (+)NCBICHM1_1
T2T-CHM13v2.01487,026,063 - 87,071,707 (+)NCBIT2T-CHM13v2.0
Golga5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.26121,612,389 - 121,640,552 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6121,612,529 - 121,640,413 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx6121,751,246 - 121,779,125 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.06122,046,504 - 122,074,379 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.06121,382,568 - 121,410,729 (+)NCBIRnor_WKY
Rnor_6.06126,350,572 - 126,378,735 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6126,353,223 - 126,378,610 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06135,561,133 - 135,589,807 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46126,740,320 - 126,765,513 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16126,744,066 - 126,769,260 (+)NCBI
Celera6119,103,910 - 119,128,964 (+)NCBICelera
Cytogenetic Map6q32NCBI
Golga5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543814,992,710 - 15,035,136 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543814,992,710 - 15,031,297 (+)NCBIChiLan1.0ChiLan1.0
GOLGA5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11492,770,342 - 92,815,444 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1492,770,342 - 92,815,444 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01473,430,700 - 73,475,979 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
GOLGA5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.181,874,716 - 1,907,251 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl81,874,833 - 1,907,403 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha81,898,418 - 1,931,308 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.081,930,507 - 1,963,631 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl81,930,452 - 1,963,631 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.181,866,438 - 1,899,688 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.081,816,771 - 1,849,647 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.081,943,874 - 1,976,991 (+)NCBIUU_Cfam_GSD_1.0
Golga5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864012,599,965 - 12,635,665 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936733831,076 - 867,207 (+)EnsemblSpeTri2.0
SpeTri2.0NW_004936733831,247 - 867,207 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GOLGA5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl7114,237,145 - 114,273,915 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.17114,237,059 - 114,273,916 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.27120,849,075 - 120,882,783 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GOLGA5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12470,544,246 - 70,590,195 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2470,544,237 - 70,590,312 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605357,792,637 - 57,838,832 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Golga5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247349,292,714 - 9,340,905 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247349,288,953 - 9,339,573 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:258
Count of miRNA genes:110
Interacting mature miRNAs:119
Transcripts:ENSMUST00000021609, ENSMUST00000179218
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142002Tbqt3_mtibia bone quality traits 3 (mouse)Not determined1235285496109936243Mouse
27226793Feml10_mfemur length 10, 5 week (mouse)1268346774113363620Mouse
4141738Tgq23_mtriglyceride QTL 23 (mouse)Not determined72112877106112877Mouse
1301926Adip6_madiposity 6 (mouse)Not determined1273887422107887526Mouse
1301689Skull18_mskull morphology 18 (mouse)Not determined1273887422107887526Mouse
13524842Ppiq10a_mprepulse inhibition QTL 10a (mouse)1277512220111512220Mouse
4141610Tailaq1_mtail length adjusted QTL 1 (mouse)Not determined80956708113383533Mouse
4142401Egq10_mearly growth QTL 10 (mouse)Not determined80956708113383533Mouse
4141335W6q10_mweight 6 weeks QTL 10 (mouse)Not determined80956708113383533Mouse
39128213Lwq23_mliver weight QTL 10 (mouse)1280956708113383533Mouse
13524849Ppiq11a_mprepulse inhibition QTL 11a (mouse)1280989143114989143Mouse
25823169Hrsq8_mhost response to SARS QTL 8, log titer (mouse)1281696245108495368Mouse
13524846Ppiq11_mprepulse inhibition QTL 11 (mouse)1282666396116666396Mouse
1301492Dbsty3_mdiabesity 3 (mouse)Not determined1283532075117532224Mouse
1301879Insq10_minsulin QTL 10 (mouse)Not determined1283532075117532224Mouse
1300883Ath21_matherosclerosis 21 (mouse)Not determined1285961579119961683Mouse
10412156Nociq3_mnociceptive sensitivity inflammatory QTL 3 (mouse)Not determined1286396075114831653Mouse
4142007Chlq17_mcirculating hormone level QTL 17 (mouse)Not determined1288052874120092757Mouse
1300545Lifespan3_mlife span 3 (mouse)Not determined1288052874120092757Mouse
1301308Prdt4_mprion disease incubation time 4 (mouse)Not determined1288308354120092757Mouse
5491194Mobq3_mmultigenic obesity QTL 3 (mouse)Not determined1289664071120092757Mouse
1301836Heal5_mwound healing/regeneration 5 (mouse)Not determined1289939031120092757Mouse
1301922Bbaa6_mB.burgdorferi-associated arthritis 6 (mouse)Not determined1290308268120092757Mouse
12910790Pwgrq7_mpre-weaning growth rate QTL 7 (mouse)1290937367108645308Mouse
10402491Dipa4_mdrug induced psychomotor activation 4 (mouse)Not determined1291222515120092757Mouse
10412192Bbaa27_mB.burgdorferi-associated arthritis 27 (mouse)Not determined1291254220107308393Mouse
12910532Nrq10a_mnoise-induced hearing loss resistant QTL 10a (mouse)1292750025120092757Mouse
12910533Nrq10_mnoise-induced hearing loss resistant QTL 10 (mouse)1292750025120092757Mouse
1357463Vtbt14_mvertebral trabecular bone trait 14 (mouse)Not determined1292936097120092757Mouse
1300973Abmm_mantibody mediated myocarditis (mouse)Not determined1293264461120092757Mouse
11039526Ccc1_mcolitis susceptibility in the Collaborative Cross 1 (mouse)1293528334111028223Mouse
1302177Dps2_mdelta power in slow-wave sleep 2 (mouse)Not determined1294146064120092757Mouse
1302138Im6_mimmunoregulatory 6 (mouse)Not determined1296860337120092757Mouse
1301269Sluc12_msusceptibility to lung cancer 12 (mouse)Not determined1296860337120092757Mouse
4141586Ssrq6_mstress response QTL 6 (mouse)Not determined100532075102461265Mouse
10412075Nils1_mneointima lesion size 1 (mouse)Not determined12102024665120092757Mouse

Markers in Region
AW488996  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3812102,497,559 - 102,497,690UniSTSGRCm38
MGSCv3712103,735,769 - 103,735,900UniSTSGRCm37
Celera12103,708,638 - 103,708,769UniSTS
Cytogenetic Map12F1UniSTS
Whitehead/MRC_RH12962.8UniSTS
D12Mit101  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3812102,494,840 - 102,495,006UniSTSGRCm38
MGSCv3712103,733,050 - 103,733,216UniSTSGRCm37
Celera12103,706,042 - 103,706,208UniSTS
Cytogenetic Map12F1UniSTS
cM Map1250.0UniSTS
Whitehead Genetic1244.8UniSTS
Whitehead/MRC_RH12946.04UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001199004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_013747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB016784 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC122302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC156033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF026274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK007592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK138455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC016883 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC086782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337091 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337129 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337131 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337135 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337161 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF337162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000021609   ⟹   ENSMUSP00000021609
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl12102,435,451 - 102,464,166 (+)Ensembl
GRCm38.p6 Ensembl12102,469,192 - 102,497,907 (+)Ensembl
RefSeq Acc Id: ENSMUST00000179218   ⟹   ENSMUSP00000137305
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl12102,435,394 - 102,464,164 (+)Ensembl
GRCm38.p6 Ensembl12102,469,135 - 102,497,905 (+)Ensembl
RefSeq Acc Id: ENSMUST00000222744   ⟹   ENSMUSP00000152653
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl12102,450,716 - 102,463,841 (+)Ensembl
GRCm38.p6 Ensembl12102,484,457 - 102,497,582 (+)Ensembl
RefSeq Acc Id: NM_001199004   ⟹   NP_001185933
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3912102,435,393 - 102,464,166 (+)NCBI
GRCm3812102,469,134 - 102,497,907 (+)NCBI
Celera12103,680,336 - 103,708,985 (+)ENTREZGENE
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_013747   ⟹   NP_038775
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3912102,436,169 - 102,464,166 (+)NCBI
GRCm3812102,469,910 - 102,497,907 (+)NCBI
MGSCv3712103,708,120 - 103,736,117 (+)RGD
Celera12103,680,336 - 103,708,985 (+)ENTREZGENE
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006515935   ⟹   XP_006515998
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3912102,435,372 - 102,464,274 (+)NCBI
GRCm3812102,469,109 - 102,498,015 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001185933 (Get FASTA)   NCBI Sequence Viewer  
  NP_038775 (Get FASTA)   NCBI Sequence Viewer  
  XP_006515998 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAF21628 (Get FASTA)   NCBI Sequence Viewer  
  AAH16883 (Get FASTA)   NCBI Sequence Viewer  
  AAH86782 (Get FASTA)   NCBI Sequence Viewer  
  ADY50219 (Get FASTA)   NCBI Sequence Viewer  
  ADY50220 (Get FASTA)   NCBI Sequence Viewer  
  ADY50221 (Get FASTA)   NCBI Sequence Viewer  
  ADY50222 (Get FASTA)   NCBI Sequence Viewer  
  ADY50223 (Get FASTA)   NCBI Sequence Viewer  
  ADY50224 (Get FASTA)   NCBI Sequence Viewer  
  ADY50225 (Get FASTA)   NCBI Sequence Viewer  
  ADY50226 (Get FASTA)   NCBI Sequence Viewer  
  ADY50227 (Get FASTA)   NCBI Sequence Viewer  
  ADY50228 (Get FASTA)   NCBI Sequence Viewer  
  ADY50229 (Get FASTA)   NCBI Sequence Viewer  
  ADY50230 (Get FASTA)   NCBI Sequence Viewer  
  ADY50231 (Get FASTA)   NCBI Sequence Viewer  
  ADY50232 (Get FASTA)   NCBI Sequence Viewer  
  ADY50233 (Get FASTA)   NCBI Sequence Viewer  
  ADY50234 (Get FASTA)   NCBI Sequence Viewer  
  ADY50235 (Get FASTA)   NCBI Sequence Viewer  
  ADY50236 (Get FASTA)   NCBI Sequence Viewer  
  ADY50237 (Get FASTA)   NCBI Sequence Viewer  
  ADY50238 (Get FASTA)   NCBI Sequence Viewer  
  ADY50239 (Get FASTA)   NCBI Sequence Viewer  
  ADY50240 (Get FASTA)   NCBI Sequence Viewer  
  ADY50241 (Get FASTA)   NCBI Sequence Viewer  
  ADY50242 (Get FASTA)   NCBI Sequence Viewer  
  ADY50243 (Get FASTA)   NCBI Sequence Viewer  
  ADY50244 (Get FASTA)   NCBI Sequence Viewer  
  ADY50245 (Get FASTA)   NCBI Sequence Viewer  
  ADY50246 (Get FASTA)   NCBI Sequence Viewer  
  ADY50247 (Get FASTA)   NCBI Sequence Viewer  
  ADY50248 (Get FASTA)   NCBI Sequence Viewer  
  ADY50249 (Get FASTA)   NCBI Sequence Viewer  
  ADY50250 (Get FASTA)   NCBI Sequence Viewer  
  ADY50251 (Get FASTA)   NCBI Sequence Viewer  
  ADY50252 (Get FASTA)   NCBI Sequence Viewer  
  ADY50253 (Get FASTA)   NCBI Sequence Viewer  
  ADY50254 (Get FASTA)   NCBI Sequence Viewer  
  ADY50255 (Get FASTA)   NCBI Sequence Viewer  
  ADY50256 (Get FASTA)   NCBI Sequence Viewer  
  ADY50257 (Get FASTA)   NCBI Sequence Viewer  
  ADY50258 (Get FASTA)   NCBI Sequence Viewer  
  ADY50259 (Get FASTA)   NCBI Sequence Viewer  
  ADY50260 (Get FASTA)   NCBI Sequence Viewer  
  ADY50261 (Get FASTA)   NCBI Sequence Viewer  
  ADY50262 (Get FASTA)   NCBI Sequence Viewer  
  ADY50263 (Get FASTA)   NCBI Sequence Viewer  
  ADY50264 (Get FASTA)   NCBI Sequence Viewer  
  ADY50265 (Get FASTA)   NCBI Sequence Viewer  
  ADY50266 (Get FASTA)   NCBI Sequence Viewer  
  ADY50267 (Get FASTA)   NCBI Sequence Viewer  
  ADY50268 (Get FASTA)   NCBI Sequence Viewer  
  ADY50269 (Get FASTA)   NCBI Sequence Viewer  
  ADY50270 (Get FASTA)   NCBI Sequence Viewer  
  ADY50271 (Get FASTA)   NCBI Sequence Viewer  
  ADY50272 (Get FASTA)   NCBI Sequence Viewer  
  ADY50273 (Get FASTA)   NCBI Sequence Viewer  
  ADY50274 (Get FASTA)   NCBI Sequence Viewer  
  ADY50275 (Get FASTA)   NCBI Sequence Viewer  
  ADY50276 (Get FASTA)   NCBI Sequence Viewer  
  ADY50277 (Get FASTA)   NCBI Sequence Viewer  
  ADY50278 (Get FASTA)   NCBI Sequence Viewer  
  ADY50279 (Get FASTA)   NCBI Sequence Viewer  
  ADY50280 (Get FASTA)   NCBI Sequence Viewer  
  ADY50281 (Get FASTA)   NCBI Sequence Viewer  
  ADY50282 (Get FASTA)   NCBI Sequence Viewer  
  ADY50283 (Get FASTA)   NCBI Sequence Viewer  
  ADY50284 (Get FASTA)   NCBI Sequence Viewer  
  ADY50285 (Get FASTA)   NCBI Sequence Viewer  
  ADY50286 (Get FASTA)   NCBI Sequence Viewer  
  ADY50287 (Get FASTA)   NCBI Sequence Viewer  
  ADY50288 (Get FASTA)   NCBI Sequence Viewer  
  ADY50289 (Get FASTA)   NCBI Sequence Viewer  
  ADY50290 (Get FASTA)   NCBI Sequence Viewer  
  ADY50291 (Get FASTA)   NCBI Sequence Viewer  
  ADY50292 (Get FASTA)   NCBI Sequence Viewer  
  ADY50293 (Get FASTA)   NCBI Sequence Viewer  
  BAA33010 (Get FASTA)   NCBI Sequence Viewer  
  BAE23668 (Get FASTA)   NCBI Sequence Viewer  
  BAE31289 (Get FASTA)   NCBI Sequence Viewer  
  BAE31649 (Get FASTA)   NCBI Sequence Viewer  
  BAE40601 (Get FASTA)   NCBI Sequence Viewer  
  EDL18861 (Get FASTA)   NCBI Sequence Viewer  
  EDL18862 (Get FASTA)   NCBI Sequence Viewer  
  EDL18863 (Get FASTA)   NCBI Sequence Viewer  
  EDL18864 (Get FASTA)   NCBI Sequence Viewer  
  Q9QYE6 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_038775   ⟸   NM_013747
- UniProtKB: Q3UUF9 (UniProtKB/Swiss-Prot),   Q9QYE6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001185933   ⟸   NM_001199004
- UniProtKB: Q3UUF9 (UniProtKB/Swiss-Prot),   Q9QYE6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006515998   ⟸   XM_006515935
- Peptide Label: isoform X1
- UniProtKB: Q3UUF9 (UniProtKB/Swiss-Prot),   Q9QYE6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000152653   ⟸   ENSMUST00000222744
RefSeq Acc Id: ENSMUSP00000137305   ⟸   ENSMUST00000179218
RefSeq Acc Id: ENSMUSP00000021609   ⟸   ENSMUST00000021609

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9QYE6-F1-model_v2 AlphaFold Q9QYE6 1-729 view protein structure

Promoters
RGD ID:8679046
Promoter ID:EPDNEW_M17554
Type:initiation region
Name:Golga5_2
Description:Mus musculus golgi autoantigen, golgin subfamily a, 5 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M17555  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3812102,469,134 - 102,469,194EPDNEW
RGD ID:8679078
Promoter ID:EPDNEW_M17555
Type:initiation region
Name:Golga5_1
Description:Mus musculus golgi autoantigen, golgin subfamily a, 5 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M17554  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3812102,469,275 - 102,469,335EPDNEW
RGD ID:6823035
Promoter ID:MM_KWN:12535
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000021609,   UC007OUG.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3612103,707,239 - 103,707,739 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1351475 AgrOrtholog
Ensembl Genes ENSMUSG00000021192 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000021609 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000137305 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000152653.2 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000021609 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000179218 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000222744.2 UniProtKB/TrEMBL
InterPro Golgin_subfamily_A_member_5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:27277 UniProtKB/Swiss-Prot
MGD MGI:1351475 ENTREZGENE
NCBI Gene 27277 ENTREZGENE
PANTHER PTHR13815 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Golgin_A5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Golga5 PhenoGen
UniProt A0A1Y7VMD3_MOUSE UniProtKB/TrEMBL
  GOGA5_MOUSE UniProtKB/Swiss-Prot
  Q3UUF9 ENTREZGENE
  Q9QYE6 ENTREZGENE
UniProt Secondary O88317 UniProtKB/Swiss-Prot
  Q3TGE7 UniProtKB/Swiss-Prot
  Q3U6S5 UniProtKB/Swiss-Prot
  Q3UUF9 UniProtKB/Swiss-Prot