GOLGA5 (golgin A5) - Rat Genome Database

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Gene: GOLGA5 (golgin A5) Homo sapiens
Analyze
Symbol: GOLGA5
Name: golgin A5
RGD ID: 1317779
HGNC Page HGNC:4428
Description: Enables protein homodimerization activity and small GTPase binding activity. Involved in Golgi organization and Golgi vesicle transport. Located in Golgi cisterna; cis-Golgi network; and membrane.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: cell proliferation-inducing gene 31 protein; golgi autoantigen, golgin subfamily a, 5; golgi integral membrane protein 5; Golgin subfamily A member 5; golgin-84; GOLIM5; RET-fused gene 5 protein; ret-II; RFG5
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: GOLGA5P1  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381492,794,305 - 92,839,947 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1492,794,305 - 92,839,947 (+)EnsemblGRCh38hg38GRCh38
GRCh371493,260,650 - 93,306,292 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361492,330,403 - 92,376,057 (+)NCBINCBI36Build 36hg18NCBI36
Build 341492,330,402 - 92,376,057NCBI
Celera1473,314,759 - 73,360,445 (+)NCBICelera
Cytogenetic Map14q32.12ENTREZGENE
HuRef1473,443,587 - 73,489,353 (+)NCBIHuRef
CHM1_11493,198,767 - 93,244,558 (+)NCBICHM1_1
T2T-CHM13v2.01487,026,063 - 87,071,707 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. Detection of a novel type of RET rearrangement (PTC5) in thyroid carcinomas after Chernobyl and analysis of the involved RET-fused gene RFG5. Klugbauer S, etal., Cancer Res. 1998 Jan 15;58(2):198-203.
3. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. RGD HPO Phenotype Annotation Pipeline RGD automated import pipeline for human HPO-to-gene-to-disease annotations
Additional References at PubMed
PMID:2734021   PMID:9915833   PMID:12477932   PMID:12508121   PMID:12538640   PMID:12656988   PMID:12699642   PMID:15004235   PMID:15144186   PMID:15489334   PMID:15592455   PMID:15718469  
PMID:16344560   PMID:17081983   PMID:18029348   PMID:19060882   PMID:19946888   PMID:20874812   PMID:21873635   PMID:21990969   PMID:22558309   PMID:25468996   PMID:25798074   PMID:26186194  
PMID:26472760   PMID:26496610   PMID:26638075   PMID:26831064   PMID:27173435   PMID:27880917   PMID:28514442   PMID:28561026   PMID:28718761   PMID:29180619   PMID:29509190   PMID:29568061  
PMID:29778605   PMID:30194290   PMID:30639242   PMID:31056421   PMID:31076515   PMID:31091453   PMID:31519766   PMID:31536960   PMID:31732153   PMID:31871319   PMID:32344865   PMID:32707033  
PMID:32788342   PMID:32838362   PMID:32877691   PMID:33845483   PMID:33916271   PMID:33957083   PMID:33961781   PMID:34079125   PMID:34432599   PMID:34672954   PMID:34702444   PMID:34709727  
PMID:34882091   PMID:35256949   PMID:35271311   PMID:35844135   PMID:35944360  


Genomics

Comparative Map Data
GOLGA5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381492,794,305 - 92,839,947 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1492,794,305 - 92,839,947 (+)EnsemblGRCh38hg38GRCh38
GRCh371493,260,650 - 93,306,292 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361492,330,403 - 92,376,057 (+)NCBINCBI36Build 36hg18NCBI36
Build 341492,330,402 - 92,376,057NCBI
Celera1473,314,759 - 73,360,445 (+)NCBICelera
Cytogenetic Map14q32.12ENTREZGENE
HuRef1473,443,587 - 73,489,353 (+)NCBIHuRef
CHM1_11493,198,767 - 93,244,558 (+)NCBICHM1_1
T2T-CHM13v2.01487,026,063 - 87,071,707 (+)NCBIT2T-CHM13v2.0
Golga5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912102,435,372 - 102,464,274 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl12102,435,394 - 102,464,166 (+)EnsemblGRCm39 Ensembl
GRCm3812102,469,109 - 102,498,015 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12102,469,135 - 102,497,907 (+)EnsemblGRCm38mm10GRCm38
MGSCv3712103,708,120 - 103,736,117 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3612102,870,242 - 102,898,957 (+)NCBIMGSCv36mm8
Celera12103,681,112 - 103,708,985 (+)NCBICelera
Cytogenetic Map12ENCBI
Golga5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.26121,612,389 - 121,640,552 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6121,612,529 - 121,640,413 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx6121,751,246 - 121,779,125 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.06122,046,504 - 122,074,379 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.06121,382,568 - 121,410,729 (+)NCBIRnor_WKY
Rnor_6.06126,350,572 - 126,378,735 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6126,353,223 - 126,378,610 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06135,561,133 - 135,589,807 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46126,740,320 - 126,765,513 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16126,744,066 - 126,769,260 (+)NCBI
Celera6119,103,910 - 119,128,964 (+)NCBICelera
Cytogenetic Map6q32NCBI
Golga5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543814,992,710 - 15,035,136 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543814,992,710 - 15,031,297 (+)NCBIChiLan1.0ChiLan1.0
GOLGA5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11492,770,342 - 92,815,444 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1492,770,342 - 92,815,444 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01473,430,700 - 73,475,979 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
GOLGA5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.181,874,716 - 1,907,251 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl81,874,833 - 1,907,403 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha81,898,418 - 1,931,308 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.081,930,507 - 1,963,631 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl81,930,452 - 1,963,631 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.181,866,438 - 1,899,688 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.081,816,771 - 1,849,647 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.081,943,874 - 1,976,991 (+)NCBIUU_Cfam_GSD_1.0
Golga5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864012,599,965 - 12,635,665 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936733831,076 - 867,207 (+)EnsemblSpeTri2.0
SpeTri2.0NW_004936733831,247 - 867,207 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GOLGA5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl7114,237,145 - 114,273,915 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.17114,237,059 - 114,273,916 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.27120,849,075 - 120,882,783 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GOLGA5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12470,544,246 - 70,590,195 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2470,544,237 - 70,590,312 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605357,792,637 - 57,838,832 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Golga5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247349,292,714 - 9,340,905 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247349,288,953 - 9,339,573 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in GOLGA5
3 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NM_005113.3(GOLGA5):c.545-2459G>T single nucleotide variant Lung cancer [RCV000099226] Chr14:92804277 [GRCh38]
Chr14:93270622 [GRCh37]
Chr14:14q32.12
uncertain significance
GRCh38/hg38 14q32.11-32.13(chr14:90255156-95274696)x1 copy number loss See cases [RCV000051551] Chr14:90255156..95274696 [GRCh38]
Chr14:90721500..95741033 [GRCh37]
Chr14:89791253..94810786 [NCBI36]
Chr14:14q32.11-32.13
pathogenic
GRCh38/hg38 14q31.3-32.33(chr14:86094030-106832642)x3 copy number gain See cases [RCV000052295] Chr14:86094030..106832642 [GRCh38]
Chr14:86560374..107240869 [GRCh37]
Chr14:85630127..106311914 [NCBI36]
Chr14:14q31.3-32.33
pathogenic
GRCh38/hg38 14q24.2-32.2(chr14:72787506-99596719)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052293]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052293]|See cases [RCV000052293] Chr14:72787506..99596719 [GRCh38]
Chr14:73254214..100063056 [GRCh37]
Chr14:72323967..99132809 [NCBI36]
Chr14:14q24.2-32.2
pathogenic
GRCh38/hg38 14q32.12(chr14:92694709-92905919)x3 copy number gain See cases [RCV000052087] Chr14:92694709..92905919 [GRCh38]
Chr14:93161054..93560107 [GRCh37]
Chr14:92230807..92629860 [NCBI36]
Chr14:14q32.12
uncertain significance
GRCh38/hg38 14q31.2-32.33(chr14:83912345-106855405)x3 copy number gain See cases [RCV000052294] Chr14:83912345..106855405 [GRCh38]
Chr14:84378689..107263620 [GRCh37]
Chr14:83448442..106334665 [NCBI36]
Chr14:14q31.2-32.33
pathogenic
GRCh38/hg38 14q32.12-32.33(chr14:91455861-106832642)x3 copy number gain See cases [RCV000052296] Chr14:91455861..106832642 [GRCh38]
Chr14:91922205..107240869 [GRCh37]
Chr14:90991958..106311914 [NCBI36]
Chr14:14q32.12-32.33
pathogenic
NM_005113.3(GOLGA5):c.1611A>G (p.Arg537=) single nucleotide variant Malignant melanoma [RCV000070657] Chr14:92819827 [GRCh38]
Chr14:93286172 [GRCh37]
Chr14:92355925 [NCBI36]
Chr14:14q32.12
not provided
GRCh38/hg38 14q24.3-32.33(chr14:73655772-106879298)x3 copy number gain See cases [RCV000134000] Chr14:73655772..106879298 [GRCh38]
Chr14:74122475..107287505 [GRCh37]
Chr14:73192228..106358550 [NCBI36]
Chr14:14q24.3-32.33
pathogenic
GRCh38/hg38 14q11.2-32.33(chr14:20151149-106855263)x3 copy number gain See cases [RCV000135543] Chr14:20151149..106855263 [GRCh38]
Chr14:20619308..107263478 [GRCh37]
Chr14:19689148..106334523 [NCBI36]
Chr14:14q11.2-32.33
pathogenic
GRCh38/hg38 14q32.12-32.33(chr14:92540983-104863658)x3 copy number gain See cases [RCV000135896] Chr14:92540983..104863658 [GRCh38]
Chr14:93007328..105329995 [GRCh37]
Chr14:92077081..104401040 [NCBI36]
Chr14:14q32.12-32.33
pathogenic
GRCh38/hg38 14q24.3-32.33(chr14:77222795-106879298)x3 copy number gain See cases [RCV000138230] Chr14:77222795..106879298 [GRCh38]
Chr14:77689138..107287505 [GRCh37]
Chr14:76758891..106358550 [NCBI36]
Chr14:14q24.3-32.33
pathogenic
GRCh38/hg38 14q11.2-32.33(chr14:20043514-106877229)x3 copy number gain See cases [RCV000143373] Chr14:20043514..106877229 [GRCh38]
Chr14:20511673..107285437 [GRCh37]
Chr14:19581513..106356482 [NCBI36]
Chr14:14q11.2-32.33
pathogenic
GRCh37/hg19 14q11.2-32.33(chr14:19794561-107234280)x3 copy number gain See cases [RCV000446256] Chr14:19794561..107234280 [GRCh37]
Chr14:14q11.2-32.33
pathogenic
GRCh37/hg19 14q23.2-32.33(chr14:62493932-107285437)x3 copy number gain See cases [RCV000448557] Chr14:62493932..107285437 [GRCh37]
Chr14:14q23.2-32.33
pathogenic
GRCh37/hg19 14q11.2-32.33(chr14:20511673-107285437) copy number gain See cases [RCV000512041] Chr14:20511673..107285437 [GRCh37]
Chr14:14q11.2-32.33
pathogenic
GRCh37/hg19 14q32.12(chr14:93001577-93605662)x3 copy number gain See cases [RCV000512309] Chr14:93001577..93605662 [GRCh37]
Chr14:14q32.12
uncertain significance
GRCh37/hg19 14q24.2-32.33(chr14:73750741-107285437)x3 copy number gain See cases [RCV000512497] Chr14:73750741..107285437 [GRCh37]
Chr14:14q24.2-32.33
pathogenic
GRCh37/hg19 14q31.2-32.2(chr14:84783137-96908198)x1 copy number loss not provided [RCV000683625] Chr14:84783137..96908198 [GRCh37]
Chr14:14q31.2-32.2
pathogenic
GRCh37/hg19 14q11.1-32.33(chr14:19000422-107289053)x3 copy number gain not provided [RCV000738412] Chr14:19000422..107289053 [GRCh37]
Chr14:14q11.1-32.33
pathogenic
GRCh37/hg19 14q11.2-32.33(chr14:19280733-107287663)x3 copy number gain not provided [RCV000738413] Chr14:19280733..107287663 [GRCh37]
Chr14:14q11.2-32.33
pathogenic
GRCh37/hg19 14q11.2-32.33(chr14:19327823-107287663)x3 copy number gain not provided [RCV000738414] Chr14:19327823..107287663 [GRCh37]
Chr14:14q11.2-32.33
pathogenic
NM_005113.4(GOLGA5):c.1120G>A (p.Glu374Lys) single nucleotide variant not provided [RCV000970014] Chr14:92811554 [GRCh38]
Chr14:93277899 [GRCh37]
Chr14:14q32.12
likely benign
GRCh37/hg19 14q32.12-32.33(chr14:91969028-107285437)x3 copy number gain not provided [RCV000848687] Chr14:91969028..107285437 [GRCh37]
Chr14:14q32.12-32.33
pathogenic
GRCh37/hg19 14q31.2-32.2(chr14:84783523-96907490)x1 copy number loss Deletion syndrome [RCV001004048] Chr14:84783523..96907490 [GRCh37]
Chr14:14q31.2-32.2
pathogenic
GRCh37/hg19 14q31.3-32.13(chr14:88345625-94773741) copy number loss not specified [RCV002053117] Chr14:88345625..94773741 [GRCh37]
Chr14:14q31.3-32.13
pathogenic
GRCh37/hg19 14q13.3-32.33(chr14:37671058-106985955)x2 copy number gain See cases [RCV002286356] Chr14:37671058..106985955 [GRCh37]
Chr14:14q13.3-32.33
pathogenic
GRCh37/hg19 14q31.1-32.2(chr14:81593708-97059276)x3 copy number gain not provided [RCV002472541] Chr14:81593708..97059276 [GRCh37]
Chr14:14q31.1-32.2
likely pathogenic
GRCh37/hg19 14q31.2-32.33(chr14:84537502-107285437)x3 copy number gain not provided [RCV002472581] Chr14:84537502..107285437 [GRCh37]
Chr14:14q31.2-32.33
pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:712
Count of miRNA genes:307
Interacting mature miRNAs:335
Transcripts:ENST00000163416, ENST00000355976, ENST00000554700, ENST00000555793
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
D14S897  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37539,168,967 - 39,169,079UniSTSGRCh37
GRCh371493,306,020 - 93,306,132UniSTSGRCh37
Build 36539,204,724 - 39,204,836RGDNCBI36
Celera539,055,541 - 39,055,653RGD
Celera1473,360,161 - 73,360,273UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map5p13.1UniSTS
HuRef539,120,564 - 39,120,676UniSTS
HuRef1473,489,064 - 73,489,176UniSTS
A009C34  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371493,304,493 - 93,304,596UniSTSGRCh37
Build 361492,374,246 - 92,374,349RGDNCBI36
Celera1473,358,634 - 73,358,737RGD
Cytogenetic Map14q32.12UniSTS
HuRef1473,487,537 - 73,487,640UniSTS
GeneMap99-GB4 RH Map14246.79UniSTS
G32424  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371493,304,493 - 93,304,596UniSTSGRCh37
Celera1473,358,634 - 73,358,737UniSTS
Cytogenetic Map14q32.12UniSTS
HuRef1473,487,537 - 73,487,640UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 2420 2204 1691 601 1448 443 4272 1888 3167 391 1445 1601 171 1204 2706 4
Low 16 784 35 22 501 22 84 308 565 28 12 10 4 1 82 2 1
Below cutoff 3 3 1 1 2 2 2

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_023248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_005113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011537420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047432021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF085199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI288133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ132949 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK293077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK303789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL132987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL702150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW103620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW294222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY644768 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC010134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX248744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB096772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000163416   ⟹   ENSP00000163416
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1492,794,305 - 92,839,947 (+)Ensembl
RefSeq Acc Id: ENST00000554700   ⟹   ENSP00000452601
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1492,833,126 - 92,839,796 (+)Ensembl
RefSeq Acc Id: ENST00000555793
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1492,809,384 - 92,810,703 (+)Ensembl
RefSeq Acc Id: NM_005113   ⟹   NP_005104
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381492,794,305 - 92,839,947 (+)NCBI
GRCh371493,260,576 - 93,306,308 (+)NCBI
Build 361492,330,403 - 92,376,057 (+)NCBI Archive
Celera1473,314,759 - 73,360,445 (+)RGD
HuRef1473,443,587 - 73,489,353 (+)NCBI
CHM1_11493,198,767 - 93,244,558 (+)NCBI
T2T-CHM13v2.01487,026,063 - 87,071,707 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011537420   ⟹   XP_011535722
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381492,794,305 - 92,839,947 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047432021   ⟹   XP_047287977
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381492,794,305 - 92,839,947 (+)NCBI
Reference Sequences
RefSeq Acc Id: NP_005104   ⟸   NM_005113
- UniProtKB: Q9UQQ7 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011535722   ⟸   XM_011537420
- Peptide Label: isoform X2
- UniProtKB: Q8TBA6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSP00000163416   ⟸   ENST00000163416
RefSeq Acc Id: ENSP00000452601   ⟸   ENST00000554700
RefSeq Acc Id: XP_047287977   ⟸   XM_047432021
- Peptide Label: isoform X1
- UniProtKB: Q9UQQ7 (UniProtKB/Swiss-Prot)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8TBA6-F1-model_v2 AlphaFold Q8TBA6 1-731 view protein structure

Promoters
RGD ID:6791432
Promoter ID:HG_KWN:20040
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000355976,   NM_005113
Position:
Human AssemblyChrPosition (strand)Source
Build 361492,330,001 - 92,330,527 (+)MPROMDB
RGD ID:7228437
Promoter ID:EPDNEW_H19965
Type:initiation region
Name:GOLGA5_1
Description:golgin A5
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381492,794,328 - 92,794,388EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:4428 AgrOrtholog
COSMIC GOLGA5 COSMIC
Ensembl Genes ENSG00000066455 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSP00000163416 ENTREZGENE
  ENSP00000163416.2 UniProtKB/Swiss-Prot
  ENSP00000452601.1 UniProtKB/TrEMBL
Ensembl Transcript ENST00000163416 ENTREZGENE
  ENST00000163416.7 UniProtKB/Swiss-Prot
  ENST00000554700.1 UniProtKB/TrEMBL
GTEx ENSG00000066455 GTEx
HGNC ID HGNC:4428 ENTREZGENE
Human Proteome Map GOLGA5 Human Proteome Map
InterPro Golgin_subfamily_A_member_5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:9950 UniProtKB/Swiss-Prot
NCBI Gene 9950 ENTREZGENE
OMIM 606918 OMIM
PANTHER PTHR13815 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Golgin_A5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA28809 PharmGKB
UniProt GOGA5_HUMAN UniProtKB/Swiss-Prot
  H0YK03_HUMAN UniProtKB/TrEMBL
  Q8TBA6 ENTREZGENE
  Q9UQQ7 ENTREZGENE
UniProt Secondary C9JRU1 UniProtKB/Swiss-Prot
  O95287 UniProtKB/Swiss-Prot
  Q03962 UniProtKB/Swiss-Prot
  Q2TS49 UniProtKB/Swiss-Prot
  Q9UQQ7 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-07-27 GOLGA5  golgin A5  GOLGA5  golgi autoantigen, golgin subfamily a, 5  Symbol and/or name change 5135510 APPROVED