Pmf1 (polyamine-modulated factor 1) - Rat Genome Database

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Gene: Pmf1 (polyamine-modulated factor 1) Mus musculus
Analyze
Symbol: Pmf1
Name: polyamine-modulated factor 1
RGD ID: 1317521
MGI Page MGI
Description: Predicted to enable leucine zipper domain binding activity and transcription coactivator activity. Predicted to be involved in chromosome segregation. Predicted to act upstream of or within cell division. Predicted to be located in Golgi apparatus; kinetochore; and nucleoplasm. Predicted to be part of MIS12/MIND type complex. Is expressed in several structures, including central nervous system; extraembryonic component; placenta; retina; and thymus. Human ortholog(s) of this gene implicated in bladder carcinoma and urinary bladder cancer. Orthologous to human PMF1-BGLAP (PMF1-BGLAP readthrough) and PMF1 (polyamine modulated factor 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2600009M07Rik; AL033286; AW060657; PMF-1
RGD Orthologs
Human
Rat
Bonobo
Squirrel
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39388,301,445 - 88,317,752 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl388,301,450 - 88,317,638 (-)EnsemblGRCm39 Ensembl
GRCm38388,394,138 - 88,410,445 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl388,394,143 - 88,410,331 (-)EnsemblGRCm38mm10GRCm38
MGSCv37388,198,065 - 88,214,238 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36388,480,070 - 88,496,243 (-)NCBIMGSCv36mm8
Celera388,433,784 - 88,449,956 (-)NCBICelera
Cytogenetic Map3F1NCBI
cM Map338.82NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Identification of PMF1 methylation in association with bladder cancer progression. Aleman A, etal., Clin Cancer Res. 2008 Dec 15;14(24):8236-43. doi: 10.1158/1078-0432.CCR-08-0778.
2. Polyamine-modulated factor-1 methylation predicts Bacillus Calmette-Guérin response in patients with high-grade non-muscle-invasive bladder carcinoma. Alvarez-Múgica M, etal., Eur Urol. 2013 Feb;63(2):364-70. doi: 10.1016/j.eururo.2012.05.050. Epub 2012 Jun 5.
3. The Associations of PMF1, ICAM1, AGT, TRIM65, FBF1, and ACOX1 Variants With Leukoaraiosis in Chinese Population. Huang WQ, etal., Front Genet. 2019 Jul 23;10:615. doi: 10.3389/fgene.2019.00615. eCollection 2019.
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7671812   PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11583586   PMID:12466851   PMID:12477932   PMID:14610273   PMID:14681479  
PMID:15226823   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16647090   PMID:17967808   PMID:18583422   PMID:18799693   PMID:19131104   PMID:21267068   PMID:21633384  
PMID:21873635   PMID:23418356   PMID:27707753  


Genomics

Comparative Map Data
Pmf1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39388,301,445 - 88,317,752 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl388,301,450 - 88,317,638 (-)EnsemblGRCm39 Ensembl
GRCm38388,394,138 - 88,410,445 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl388,394,143 - 88,410,331 (-)EnsemblGRCm38mm10GRCm38
MGSCv37388,198,065 - 88,214,238 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36388,480,070 - 88,496,243 (-)NCBIMGSCv36mm8
Celera388,433,784 - 88,449,956 (-)NCBICelera
Cytogenetic Map3F1NCBI
cM Map338.82NCBI
PMF1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381156,213,007 - 156,240,042 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1156,212,993 - 156,240,042 (+)EnsemblGRCh38hg38GRCh38
GRCh371156,182,798 - 156,209,833 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361154,449,408 - 154,476,457 (+)NCBINCBI36Build 36hg18NCBI36
Build 341152,995,888 - 153,022,899NCBI
Celera1129,255,764 - 129,282,815 (+)NCBICelera
Cytogenetic Map1q22NCBI
HuRef1127,544,511 - 127,570,967 (+)NCBIHuRef
CHM1_11157,578,747 - 157,605,841 (+)NCBICHM1_1
T2T-CHM13v2.01155,351,461 - 155,378,502 (+)NCBIT2T-CHM13v2.0
Pmf1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82176,145,896 - 176,166,022 (-)NCBIGRCr8
mRatBN7.22173,848,074 - 173,868,272 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2173,848,074 - 173,868,270 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2180,992,811 - 181,012,347 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02179,015,172 - 179,034,708 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02173,615,181 - 173,634,763 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02187,751,770 - 187,771,933 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2187,751,776 - 187,771,865 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02207,154,781 - 207,174,337 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42180,492,380 - 180,511,936 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera2167,793,331 - 167,812,873 (-)NCBICelera
Cytogenetic Map2q34NCBI
PMF1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2193,605,235 - 93,631,577 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1193,337,133 - 93,363,475 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01131,556,843 - 131,583,180 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11135,387,760 - 135,412,907 (+)NCBIpanpan1.1PanPan1.1panPan2
LOC101978306
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505826,424,183 - 26,449,218 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365805,454,580 - 5,479,884 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365805,454,574 - 5,479,600 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PMF1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1207,627,084 - 7,655,751 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl207,627,524 - 7,655,724 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660386,919,605 - 6,949,961 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in Pmf1
349 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:221
Count of miRNA genes:183
Interacting mature miRNAs:190
Transcripts:ENSMUST00000056370
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884436Zlq3_mzygomatic length QTL 3, 10 week (mouse)33265060142405761Mouse
4142399Aec1_mautoimmune exocrinopathy 1 (mouse)Not determined7586174102690034Mouse
26884427Cvht4_mcranial vault height 4, 10 week (mouse)316054164109707316Mouse
13207570Tcq12_mtotal cholesterol QTL 12 (mouse)316504164130163649Mouse
26884422Cvht7_mcranial vault height 7, 16 week (mouse)328954149118893649Mouse
1302056Orgwq4_morgan weight QTL 4 (mouse)Not determined330067588147304689Mouse
1301705Sles3_msystemic lupus erythmatosus suppressor 3 (mouse)Not determined337174862143353183Mouse
13208566Bmiq5_mbody mass index QTL 5 (mouse)340954435115793649Mouse
26884380Skwq1_mskull length QTL 1, 5 week (mouse)343954435101607316Mouse
26884378Skwq6_mskull length QTL 6, 10 week (mouse)351907421102307316Mouse
26884382Bzwq1_mbi-zygomatic width QTL 1, 5 week (mouse)352207421137205761Mouse
11039519Ltpr3_mLeishmania tropica response 3 (mouse)356704102100464137Mouse
12880419V125Dq4_mvitamin D active form serum level QTL 4 (mouse)35890730792907307Mouse
4141294Bmd24_mbone mineral density 24 (mouse)Not determined36174006195740241Mouse
1301971Cia5_mcollagen induced arthritis QTL 5 (mouse)Not determined366046658100046795Mouse
25314313Syncl1_msynaptonemal complex length 1 (mouse)367907333128393649Mouse
11251721Ewc3_methanol withdrawal and consumption 3 (mouse)369568554103568554Mouse
1301791Char4_mP. chabaudi malaria resistance QTL 4 (mouse)Not determined369625509100655290Mouse
1301422Sle11_msystematic lupus erythematosus susceptibility 11 (mouse)Not determined370208904104209042Mouse
11049572Lmr11c_mleishmaniasis resistance 11c (mouse)372139967106140094Mouse
1300982Lmr11_mleishmaniasis resistance 11 (mouse)Not determined372139967106140094Mouse
1300595Tmevd2_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 2 (mouse)Not determined375463302109463549Mouse
1301392Eae3_msusceptibility to experimental allergic encephalomyelitis 3 (mouse)Not determined379548730113548837Mouse
1301947Pcfm3_mperiosteal circumference and femur length 3 (mouse)Not determined381084652115084797Mouse
1301904Iba2_minduction of brown adipocytes 2 (mouse)Not determined382147043116147184Mouse
11041900Lmr11a_mleishmaniasis resistance 11a (mouse)383463991117464137Mouse
11039510Ltpr3d_mLeishmania tropica response 3d (mouse)383463991117464137Mouse
11039511Ltpr3c_mLeishmania tropica response 3c (mouse)383463991117464137Mouse
11039507Ltpr3g_mLeishmania tropica response 3g (mouse)383463991117464137Mouse
11039508Ltpr3f_mLeishmania tropica response 3f (mouse)383463991117464137Mouse
11039509Ltpr3e_mLeishmania tropica response 3e (mouse)383463991117464137Mouse
11039512Ltpr3b_mLeishmania tropica response 3b (mouse)383463991117464137Mouse
1301272Cfsw1_mcystic fibrosis survival to weaning 1 (mouse)Not determined383882912117883044Mouse
4142099Cq3_mcholesterol QTL 3 (mouse)Not determined384888918118889067Mouse
14746984Manh54_mmandible shape 54 (mouse)385289152119289152Mouse
10043981Cia5a_mcollagen induced arthritis QTL 5a (mouse)Not determined38717045489140094Mouse
1357583Sle18_msystematic lupus erythematosus susceptibility 18 (mouse)Not determined387208904125316236Mouse
12738440Twq3_mtestis weight QTL 3 (mouse)387228015121228015Mouse

Markers in Region
RH124216  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38388,399,199 - 88,399,798UniSTSGRCm38
MGSCv37388,203,121 - 88,203,720UniSTSGRCm37
Celera388,438,840 - 88,439,439UniSTS
Cytogenetic Map3F1UniSTS
UniSTS:234725  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38388,412,163 - 88,412,289UniSTSGRCm38
MGSCv37388,216,085 - 88,216,211UniSTSGRCm37
Celera388,451,804 - 88,451,930UniSTS
Cytogenetic Map3F1UniSTS
PMC153489P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38945,937,338 - 45,937,594UniSTSGRCm38
GRCm38388,400,957 - 88,402,569UniSTSGRCm38
MGSCv37945,745,421 - 45,745,677UniSTSGRCm37
MGSCv37388,204,879 - 88,206,491UniSTSGRCm37
Celera943,220,492 - 43,220,747UniSTS
Celera388,440,598 - 88,442,210UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map9A5.2UniSTS
AW060657  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38388,394,329 - 88,394,426UniSTSGRCm38
MGSCv37388,198,251 - 88,198,348UniSTSGRCm37
Celera388,433,970 - 88,434,067UniSTS
Cytogenetic Map3F1UniSTS
Whitehead/MRC_RH3897.71UniSTS
Pmf1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3F1UniSTS
cM Map338.82UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001310605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_025928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011240202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC102388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF348509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF348510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH010975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK011174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK013787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK078308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168200 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC034333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC049223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU701121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466547 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  W70695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000056370   ⟹   ENSMUSP00000062420
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl388,301,450 - 88,317,638 (-)Ensembl
GRCm38.p6 Ensembl388,394,143 - 88,410,331 (-)Ensembl
RefSeq Acc Id: ENSMUST00000191622
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl388,306,840 - 88,317,615 (-)Ensembl
GRCm38.p6 Ensembl388,399,533 - 88,410,308 (-)Ensembl
RefSeq Acc Id: ENSMUST00000192365
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl388,301,686 - 88,317,572 (-)Ensembl
GRCm38.p6 Ensembl388,394,379 - 88,410,265 (-)Ensembl
RefSeq Acc Id: ENSMUST00000192909   ⟹   ENSMUSP00000141229
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl388,303,375 - 88,317,593 (-)Ensembl
GRCm38.p6 Ensembl388,396,068 - 88,410,286 (-)Ensembl
RefSeq Acc Id: ENSMUST00000193338   ⟹   ENSMUSP00000141696
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl388,301,450 - 88,317,633 (-)Ensembl
GRCm38.p6 Ensembl388,394,143 - 88,410,326 (-)Ensembl
RefSeq Acc Id: ENSMUST00000195899
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl388,303,050 - 88,304,027 (-)Ensembl
GRCm38.p6 Ensembl388,395,743 - 88,396,720 (-)Ensembl
RefSeq Acc Id: ENSMUST00000198774
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl388,304,672 - 88,307,017 (-)Ensembl
GRCm38.p6 Ensembl388,397,365 - 88,399,710 (-)Ensembl
RefSeq Acc Id: NM_001310605   ⟹   NP_001297534
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39388,301,445 - 88,317,630 (-)NCBI
GRCm38388,394,138 - 88,410,397 (-)NCBI
Sequence:
RefSeq Acc Id: NM_025928   ⟹   NP_080204
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39388,301,445 - 88,317,630 (-)NCBI
GRCm38388,394,138 - 88,410,397 (-)NCBI
MGSCv37388,198,065 - 88,214,238 (-)RGD
Celera388,433,784 - 88,449,956 (-)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_011240202   ⟹   XP_011238504
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39388,301,445 - 88,317,752 (-)NCBI
GRCm38388,394,138 - 88,410,445 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030252766   ⟹   XP_030108626
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39388,301,838 - 88,317,752 (-)NCBI
GRCm38388,394,531 - 88,410,445 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_080204   ⟸   NM_025928
- Peptide Label: isoform 1
- UniProtKB: Q924B3 (UniProtKB/Swiss-Prot),   Q8K237 (UniProtKB/Swiss-Prot),   Q3UCB8 (UniProtKB/Swiss-Prot),   Q9D6E2 (UniProtKB/Swiss-Prot),   Q9CPV5 (UniProtKB/Swiss-Prot),   Q8BVG3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011238504   ⟸   XM_011240202
- Peptide Label: isoform X1
- UniProtKB: Q8BVG3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001297534   ⟸   NM_001310605
- Peptide Label: isoform 2
- UniProtKB: Q9CPV5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_030108626   ⟸   XM_030252766
- Peptide Label: isoform X2
RefSeq Acc Id: ENSMUSP00000141696   ⟸   ENSMUST00000193338
RefSeq Acc Id: ENSMUSP00000062420   ⟸   ENSMUST00000056370
RefSeq Acc Id: ENSMUSP00000141229   ⟸   ENSMUST00000192909

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9CPV5-F1-model_v2 AlphaFold Q9CPV5 1-202 view protein structure

Promoters
RGD ID:6847759
Promoter ID:MM_ACW:32266
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver,   Spleen
Transcripts:PMF1.FSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36388,199,546 - 88,200,046 (-)MPROMDB
RGD ID:6834258
Promoter ID:MM_KWN:34846
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000056370,   ENSMUST00000075250,   ENSMUST00000090958
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36388,213,891 - 88,214,872 (-)MPROMDB
RGD ID:6881136
Promoter ID:EPDNEW_M4019
Type:initiation region
Name:Pmf1_1
Description:Mus musculus polyamine-modulated factor 1 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38388,410,316 - 88,410,376EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1914287 AgrOrtholog
Ensembl Genes ENSMUSG00000028066 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000056370 ENTREZGENE
  ENSMUST00000056370.13 UniProtKB/Swiss-Prot
  ENSMUST00000192909.2 UniProtKB/TrEMBL
  ENSMUST00000193338 ENTREZGENE
  ENSMUST00000193338.6 UniProtKB/Swiss-Prot
InterPro PMF1/Nnf1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:67037 UniProtKB/Swiss-Prot
MGD MGI:1914287 ENTREZGENE
NCBI Gene 67037 ENTREZGENE
PANTHER POLYAMINE-MODULATED FACTOR 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR15459 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Nnf1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Pmf1 PhenoGen
UniProt A0A0A6YVR2_MOUSE UniProtKB/TrEMBL
  PMF1_MOUSE UniProtKB/Swiss-Prot
  Q3UCB8 ENTREZGENE
  Q8BVG3 ENTREZGENE, UniProtKB/TrEMBL
  Q8K237 ENTREZGENE
  Q924B3 ENTREZGENE
  Q9CPV5 ENTREZGENE
  Q9D6E2 ENTREZGENE
UniProt Secondary Q3UCB8 UniProtKB/Swiss-Prot
  Q8K237 UniProtKB/Swiss-Prot
  Q924B3 UniProtKB/Swiss-Prot
  Q9D6E2 UniProtKB/Swiss-Prot