B4galt4 (UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: B4galt4 (UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4) Mus musculus
Analyze
Symbol: B4galt4
Name: UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
RGD ID: 1317331
MGI Page MGI
Description: Predicted to enable N-acetyllactosamine synthase activity. Predicted to be involved in glycosylation; keratan sulfate biosynthetic process; and lactosylceramide biosynthetic process. Predicted to act upstream of or within lipid metabolic process. Predicted to be located in Golgi membrane. Predicted to be active in Golgi apparatus. Is expressed in gland and thyroid gland. Orthologous to human B4GALT4 (beta-1,4-galactosyltransferase 4).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 9130402O08Rik; b4Gal-T4; B4galt-IV; beta-1,4-galactosyltransferase 4; beta-1,4-galactosyltransferase IV; beta-1,4-GalTase 4; beta-N-acetylglucosaminyl-glycolipid beta-1,4-galactosyltransferase; beta4Gal-T4; beta4GalT-IV; lactotriaosylceramide beta-1,4-galactosyltransferase; N-acetyllactosamine synthase; nal synthase; UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 4; UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 4
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391638,562,600 - 38,589,416 (+)NCBIGRCm39mm39
GRCm39 Ensembl1638,562,626 - 38,589,411 (+)Ensembl
GRCm381638,742,220 - 38,769,054 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1638,742,264 - 38,769,049 (+)EnsemblGRCm38mm10GRCm38
MGSCv371638,742,377 - 38,769,158 (+)NCBIGRCm37mm9NCBIm37
MGSCv361638,661,614 - 38,688,176 (+)NCBImm8
Celera1639,147,148 - 39,174,186 (+)NCBICelera
Cytogenetic Map16B4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:8889548   PMID:9597550   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14681479   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073  
PMID:17883393   PMID:21267068   PMID:21677750   PMID:21873635   PMID:22967998  


Genomics

Comparative Map Data
B4galt4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391638,562,600 - 38,589,416 (+)NCBIGRCm39mm39
GRCm39 Ensembl1638,562,626 - 38,589,411 (+)Ensembl
GRCm381638,742,220 - 38,769,054 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1638,742,264 - 38,769,049 (+)EnsemblGRCm38mm10GRCm38
MGSCv371638,742,377 - 38,769,158 (+)NCBIGRCm37mm9NCBIm37
MGSCv361638,661,614 - 38,688,176 (+)NCBImm8
Celera1639,147,148 - 39,174,186 (+)NCBICelera
Cytogenetic Map16B4NCBI
B4GALT4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383119,211,742 - 119,240,878 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl3119,211,732 - 119,240,946 (-)EnsemblGRCh38hg38GRCh38
GRCh373118,930,589 - 118,959,725 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363120,413,279 - 120,442,442 (-)NCBINCBI36hg18NCBI36
Celera3117,339,081 - 117,368,232 (-)NCBI
Cytogenetic Map3q13.32NCBI
HuRef3116,306,059 - 116,335,214 (-)NCBIHuRef
CHM1_13118,894,016 - 118,923,181 (-)NCBICHM1_1
T2T-CHM13v2.03121,931,449 - 121,960,587 (-)NCBI
B4galt4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21161,995,807 - 62,021,751 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1161,995,814 - 62,021,671 (-)Ensembl
Rnor_6.01164,558,006 - 64,584,054 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1164,557,977 - 64,583,994 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01167,525,192 - 67,550,871 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41163,772,138 - 63,797,917 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11163,829,730 - 63,855,506 (-)NCBI
Celera1161,498,650 - 61,524,529 (-)NCBICelera
Cytogenetic Map11q21NCBI
B4galt4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542718,963,396 - 18,985,479 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542718,964,578 - 18,982,090 (-)NCBIChiLan1.0ChiLan1.0
B4GALT4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.13123,241,676 - 123,270,831 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3123,241,676 - 123,270,806 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v03116,329,595 - 116,358,779 (-)NCBIMhudiblu_PPA_v0panPan3
B4GALT4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13322,903,842 - 22,920,955 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3322,904,149 - 22,920,956 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3322,935,572 - 22,963,143 (-)NCBI
ROS_Cfam_1.03323,141,256 - 23,169,319 (-)NCBI
ROS_Cfam_1.0 Ensembl3323,140,761 - 23,169,352 (-)Ensembl
UMICH_Zoey_3.13322,944,497 - 22,972,114 (-)NCBI
UNSW_CanFamBas_1.03322,982,171 - 23,009,839 (-)NCBI
UU_Cfam_GSD_1.03323,549,708 - 23,577,503 (-)NCBI
B4galt4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602131,280,283 - 131,329,566 (+)NCBI
SpeTri2.0NW_0049365366,215,221 - 6,241,828 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
B4GALT4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13140,969,602 - 141,003,929 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113140,969,561 - 141,003,936 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213150,277,223 - 150,279,556 (+)NCBISscrofa10.2Sscrofa10.2susScr3
B4GALT4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12261,600,143 - 61,629,857 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2261,604,044 - 61,630,420 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666041104,706,030 - 104,735,691 (-)NCBIVero_WHO_p1.0
B4galt4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473128,939,838 - 28,971,652 (+)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_00462473128,929,599 - 28,972,417 (+)NCBIHetGla_female_1.0hetGla2


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27095908Scvln7_msacral vertebrae length 2, 5 week (mouse)16331786439820362Mouse
27226768Tibl9_mtibia length 9, 5 week (mouse)16331786451420363Mouse
27226785Feml12_mfemur length 12, 5 week (mouse)16331786464620363Mouse
26884432Zlq7_mzygomatic length QTL 7, 10 week (mouse)16381786464620363Mouse
38501069Tip4_mtuberculosis immunophenotype 4, IFN-g level (mouse)16431786444520363Mouse
1301443Mopkd2_mmodifier of polycystic kidney disease progression 2 (mouse)Not determined16464631438646414Mouse
1300656Bgeq15_mbody growth early QTL 15 (mouse)Not determined16577525239775440Mouse
1301945Skl7_mskeletal size (tail length) 7 (mouse)Not determined16577525239775440Mouse
1300943Skts9_mskin tumor susceptibility 9 (mouse)Not determined16577525239775440Mouse
1300987Skull23_mskull morphology 23 (mouse)Not determined16577525239775440Mouse
1357763Lp1_mlymphocyte proliferation 1 (mouse)Not determined16654297965466552Mouse
11251724Ewc6_methanol withdrawal and consumption 6 (mouse)16822605242226052Mouse
26884376Skwq4_mskull length QTL 4, 5 week (mouse)16841786490896888Mouse
10043978Obq35_mobesity QTL 35 (mouse)Not determined16988163143881631Mouse
1301086Lprm5_mlymphoproliferation modifier 5 (mouse)Not determined161184882445848923Mouse
1301841Lrnx9_mlearning-contextual 9 (mouse)Not determined161222536046225471Mouse
10045614Rapop6_mradiation-induced apoptosis 6 (mouse)Not determined161480292148803032Mouse
4142236Pstc4_mperiosteal circumference 4 (mouse)Not determined161552290949523112Mouse
1357517Bwtn1_mbody weight at necropsy 1 (mouse)Not determined162001932985600826Mouse
1300534Bmd15_mbone mineral density 15 (mouse)Not determined162193838355938574Mouse
4141179Ipng3_mimprinted postnatal growth 3 (mouse)Not determined2277525257594076Mouse
15092062Egrme4_mearly growth rate, maternal effect 4 (mouse)162521866444220250Mouse
11059559Lmr12a_mleishmaniasis resistance 12a (mouse)162879281362792952Mouse
11059560Lmr12b_mleishmaniasis resistance 12b (mouse)162879281362792952Mouse
11049571Lmr12c_mleishmaniasis resistance 12c (mouse)162879281362792952Mouse
1300915Lmr12_mleishmaniasis resistance 12 (mouse)Not determined162879281362792952Mouse
1301070Cypr1_mcytokine production 1 (mouse)Not determined163231279566312933Mouse
4142187Arrd3_mage-related retinal degeneration 3 (mouse)Not determined3252290965466552Mouse
1302096Aod1a_mautoimmune ovarian dysgenesis 1a (mouse)Not determined163544664392573008Mouse
10412263Gvhd6_mgraft-versus host disease 6 (mouse)Not determined163606085745511148Mouse
26884416Bzwq5_mbi-zygomatic width QTL 5, 5 week (mouse)163732036284696888Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1261
Count of miRNA genes:260
Interacting mature miRNAs:304
Transcripts:ENSMUST00000023482, ENSMUST00000114708, ENSMUST00000114710, ENSMUST00000114711, ENSMUST00000114712, ENSMUST00000154902, ENSMUST00000161010
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001285793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_019804 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_152434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006522399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011245977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036160039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003951806 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003951807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_875837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF142672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF158746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK014055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK018658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK041692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK050005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK052013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK053603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK085368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK136042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK136637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK177505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC013492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY283636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT009576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000023482   ⟹   ENSMUSP00000023482
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1638,562,626 - 38,589,411 (+)Ensembl
GRCm38.p6 Ensembl1638,742,264 - 38,769,049 (+)Ensembl
RefSeq Acc Id: ENSMUST00000114708   ⟹   ENSMUSP00000110356
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1638,581,167 - 38,588,673 (+)Ensembl
GRCm38.p6 Ensembl1638,760,805 - 38,768,311 (+)Ensembl
RefSeq Acc Id: ENSMUST00000114710   ⟹   ENSMUSP00000110358
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1638,581,097 - 38,588,644 (+)Ensembl
GRCm38.p6 Ensembl1638,760,735 - 38,768,282 (+)Ensembl
RefSeq Acc Id: ENSMUST00000114711   ⟹   ENSMUSP00000110359
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1638,581,097 - 38,589,411 (+)Ensembl
GRCm38.p6 Ensembl1638,760,735 - 38,769,049 (+)Ensembl
RefSeq Acc Id: ENSMUST00000114712   ⟹   ENSMUSP00000110360
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1638,562,628 - 38,589,210 (+)Ensembl
GRCm38.p6 Ensembl1638,742,266 - 38,768,848 (+)Ensembl
RefSeq Acc Id: ENSMUST00000154902   ⟹   ENSMUSP00000118593
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1638,562,658 - 38,589,210 (+)Ensembl
GRCm38.p6 Ensembl1638,742,296 - 38,768,848 (+)Ensembl
RefSeq Acc Id: ENSMUST00000161010
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1638,583,253 - 38,586,640 (+)Ensembl
GRCm38.p6 Ensembl1638,762,891 - 38,766,278 (+)Ensembl
RefSeq Acc Id: ENSMUST00000231655   ⟹   ENSMUSP00000156271
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1638,562,683 - 38,574,513 (+)Ensembl
GRCm38.p6 Ensembl1638,742,321 - 38,754,151 (+)Ensembl
RefSeq Acc Id: ENSMUST00000232454   ⟹   ENSMUSP00000155991
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1638,578,761 - 38,588,446 (+)Ensembl
GRCm38.p6 Ensembl1638,758,399 - 38,768,084 (+)Ensembl
RefSeq Acc Id: NM_001285793   ⟹   NP_001272722
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391638,562,621 - 38,589,416 (+)NCBI
GRCm381638,742,259 - 38,769,054 (+)NCBI
Celera1639,147,143 - 39,174,195 (+)NCBI
Sequence:
RefSeq Acc Id: NM_019804   ⟹   NP_062778
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391638,562,621 - 38,589,416 (+)NCBI
GRCm381638,742,259 - 38,769,054 (+)NCBI
MGSCv371638,742,377 - 38,769,158 (+)RGD
Celera1639,147,143 - 39,174,195 (+)NCBI
cM Map16 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_152434
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391638,562,621 - 38,589,416 (+)NCBI
GRCm381638,742,259 - 38,769,054 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006522399   ⟹   XP_006522462
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391638,562,733 - 38,589,211 (+)NCBI
GRCm381638,750,838 - 38,768,849 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011245977   ⟹   XP_011244279
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391638,571,503 - 38,589,211 (+)NCBI
GRCm381638,751,139 - 38,768,849 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036160037   ⟹   XP_036015930
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391638,571,540 - 38,589,211 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036160038   ⟹   XP_036015931
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391638,562,664 - 38,589,211 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036160039   ⟹   XP_036015932
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391638,562,632 - 38,589,211 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003951806
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391638,562,600 - 38,589,211 (+)NCBI
GRCm381638,742,220 - 38,768,849 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003951807
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391638,562,733 - 38,589,211 (+)NCBI
GRCm381638,742,373 - 38,768,849 (+)NCBI
Sequence:
RefSeq Acc Id: XR_875837
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391638,571,526 - 38,589,211 (+)NCBI
GRCm381638,751,128 - 38,768,849 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_062778   ⟸   NM_019804
- Peptide Label: precursor
- UniProtKB: Q9JJ04 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001272722   ⟸   NM_001285793
- Peptide Label: precursor
- UniProtKB: Q9JJ04 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006522462   ⟸   XM_006522399
- Peptide Label: isoform X3
- UniProtKB: Q9JJ04 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011244279   ⟸   XM_011245977
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSMUSP00000156271   ⟸   ENSMUST00000231655
RefSeq Acc Id: ENSMUSP00000118593   ⟸   ENSMUST00000154902
RefSeq Acc Id: ENSMUSP00000155991   ⟸   ENSMUST00000232454
RefSeq Acc Id: ENSMUSP00000110356   ⟸   ENSMUST00000114708
RefSeq Acc Id: ENSMUSP00000110358   ⟸   ENSMUST00000114710
RefSeq Acc Id: ENSMUSP00000110359   ⟸   ENSMUST00000114711
RefSeq Acc Id: ENSMUSP00000110360   ⟸   ENSMUST00000114712
RefSeq Acc Id: ENSMUSP00000023482   ⟸   ENSMUST00000023482
RefSeq Acc Id: XP_036015932   ⟸   XM_036160039
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036015931   ⟸   XM_036160038
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036015930   ⟸   XM_036160037
- Peptide Label: isoform X2
Protein Domains
Glyco_transf_7C   Glyco_transf_7N

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9JJ04-F1-model_v2 AlphaFold Q9JJ04 1-344 view protein structure

Promoters
RGD ID:6826833
Promoter ID:MM_KWN:20996
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Lung
Transcripts:ENSMUST00000023482,   ENSMUST00000114712,   UC007ZFK.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361638,742,191 - 38,742,691 (+)MPROMDB
RGD ID:8686206
Promoter ID:EPDNEW_M21133
Type:initiation region
Name:B4galt4_1
Description:Mus musculus UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase,polypeptide 4 , transcript variant 3, non-coding RNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381638,742,266 - 38,742,326EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1928387 AgrOrtholog
Ensembl Genes ENSMUSG00000022793 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000023482 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000110356 UniProtKB/TrEMBL
  ENSMUSP00000110358 UniProtKB/TrEMBL
  ENSMUSP00000110359 UniProtKB/TrEMBL
  ENSMUSP00000110360 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000118593 UniProtKB/TrEMBL
  ENSMUSP00000155991 UniProtKB/TrEMBL
  ENSMUSP00000156271 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000023482 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000114708 UniProtKB/TrEMBL
  ENSMUST00000114710 UniProtKB/TrEMBL
  ENSMUST00000114711 UniProtKB/TrEMBL
  ENSMUST00000114712 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000154902 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000231655 UniProtKB/TrEMBL
  ENSMUST00000232454 UniProtKB/TrEMBL
Gene3D-CATH 3.90.550.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Galactosyl_T UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Galactosyl_T_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Galactosyl_T_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucleotide-diphossugar_trans UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:56375 UniProtKB/Swiss-Prot
MGD MGI:1928387 ENTREZGENE
NCBI Gene 56375 ENTREZGENE
PANTHER PTHR19300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Glyco_transf_7C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Glyco_transf_7N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen B4galt4 PhenoGen
PRINTS B14GALTRFASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF53448 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A338P7H8_MOUSE UniProtKB/TrEMBL
  A6X8Z8_MOUSE UniProtKB/TrEMBL
  B4GT4_MOUSE UniProtKB/Swiss-Prot
  F2Z3X1_MOUSE UniProtKB/TrEMBL
  Q3UW35_MOUSE UniProtKB/TrEMBL
  Q9JJ04 ENTREZGENE
UniProt Secondary Q8BR54 UniProtKB/Swiss-Prot
  Q9QY12 UniProtKB/Swiss-Prot