Itgb1bp1 (integrin beta 1 binding protein 1) - Rat Genome Database

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Gene: Itgb1bp1 (integrin beta 1 binding protein 1) Mus musculus
Analyze
Symbol: Itgb1bp1
Name: integrin beta 1 binding protein 1
RGD ID: 1317221
MGI Page MGI
Description: Enables protein kinase binding activity. Involved in several processes, including integrin activation; positive regulation of stress fiber assembly; and regulation of cell-substrate adhesion. Located in several cellular components, including cytoskeleton; lamellipodium; and ruffle. Is expressed in left lung and right lung. Orthologous to human ITGB1BP1 (integrin subunit beta 1 binding protein 1); PARTICIPATES IN integrin mediated signaling pathway; INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AI449260; AU019480; bod; bodenin; Icap1; integrin beta-1-binding protein 1; integrin cytoplasmic domain-associated protein 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391221,317,247 - 21,336,285 (-)NCBIGRCm39mm39
GRCm39 Ensembl1221,290,826 - 21,336,285 (-)Ensembl
GRCm381221,267,246 - 21,286,292 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1221,240,825 - 21,286,284 (-)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl1221,267,420 - 21,286,284 (-)EnsemblGRCm38mm10GRCm38
MGSCv371221,275,667 - 21,292,098 (-)NCBIGRCm37mm9NCBIm37
MGSCv361221,516,296 - 21,532,727 (-)NCBImm8
Celera1219,618,971 - 19,635,133 (+)NCBICelera
Cytogenetic Map12A1.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
activation of protein kinase B activity  (ISO)
angiogenesis  (IEA)
biomineral tissue development  (IEA)
blood vessel diameter maintenance  (ISO)
blood vessel endothelial cell proliferation involved in sprouting angiogenesis  (ISO)
cell adhesion  (IEA)
cell differentiation  (IEA)
cell-matrix adhesion  (ISO)
cellular response to fibroblast growth factor stimulus  (ISO)
cellular response to vascular endothelial growth factor stimulus  (ISO)
integrin activation  (IDA)
integrin-mediated signaling pathway  (ISO)
myoblast migration  (IMP)
negative regulation of cell adhesion involved in substrate-bound cell migration  (IDA)
negative regulation of cell migration involved in sprouting angiogenesis  (ISO)
negative regulation of cell population proliferation  (ISO)
negative regulation of ERK1 and ERK2 cascade  (ISO)
negative regulation of fibroblast migration  (IDA)
negative regulation of focal adhesion assembly  (IMP,ISO)
negative regulation of protein binding  (ISO)
negative regulation of protein kinase activity  (ISO)
negative regulation of protein targeting to membrane  (ISO)
negative regulation of substrate adhesion-dependent cell spreading  (IDA,ISO)
Notch signaling pathway  (IEA)
positive regulation of cell division  (IEA)
positive regulation of cell population proliferation  (ISO)
positive regulation of endothelial cell migration  (ISO)
positive regulation of focal adhesion assembly  (IDA)
positive regulation of Notch signaling pathway  (ISO)
positive regulation of protein kinase B signaling  (ISO)
positive regulation of protein targeting to membrane  (IDA)
positive regulation of stress fiber assembly  (IDA)
positive regulation of transcription by RNA polymerase II  (ISO)
protein localization to plasma membrane  (ISO)
receptor clustering  (IDA)
regulation of cell adhesion  (ISO)
regulation of cell adhesion mediated by integrin  (IMP)
regulation of GTPase activity  (ISO)
regulation of integrin-mediated signaling pathway  (IDA,IMP)
tube formation  (ISO)

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:8889548   PMID:9626504   PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:15489334   PMID:15703214   PMID:15782199   PMID:16141072   PMID:16141073  
PMID:16741948   PMID:17567669   PMID:17654484   PMID:18227284   PMID:20616313   PMID:21267068   PMID:21768292   PMID:23720740   PMID:23918940   PMID:28049720   PMID:31040226  


Genomics

Comparative Map Data
Itgb1bp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391221,317,247 - 21,336,285 (-)NCBIGRCm39mm39
GRCm39 Ensembl1221,290,826 - 21,336,285 (-)Ensembl
GRCm381221,267,246 - 21,286,292 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1221,240,825 - 21,286,284 (-)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl1221,267,420 - 21,286,284 (-)EnsemblGRCm38mm10GRCm38
MGSCv371221,275,667 - 21,292,098 (-)NCBIGRCm37mm9NCBIm37
MGSCv361221,516,296 - 21,532,727 (-)NCBImm8
Celera1219,618,971 - 19,635,133 (+)NCBICelera
Cytogenetic Map12A1.3NCBI
ITGB1BP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl29,403,475 - 9,423,528 (-)EnsemblGRCh38hg38GRCh38
GRCh3829,403,475 - 9,423,569 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh3729,543,604 - 9,563,698 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3629,463,264 - 9,481,094 (-)NCBINCBI36hg18NCBI36
Build 3429,496,414 - 9,514,233NCBI
Celera29,457,992 - 9,475,539 (-)NCBI
Cytogenetic Map2p25.1NCBI
HuRef29,391,245 - 9,409,126 (-)NCBIHuRef
CHM1_129,475,472 - 9,493,078 (-)NCBICHM1_1
Itgb1bp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2640,820,693 - 40,836,074 (-)NCBImRatBN7.2
Rnor_6.0 Ensembl643,348,958 - 43,363,335 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0643,348,927 - 43,363,633 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0660,216,633 - 60,231,381 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4641,830,110 - 41,844,514 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1641,833,498 - 41,847,916 (-)NCBI
Celera640,108,431 - 40,122,817 (-)NCBICelera
Cytogenetic Map6q16NCBI
Itgb1bp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554875,134,135 - 5,146,449 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554875,134,135 - 5,146,449 (-)NCBIChiLan1.0ChiLan1.0
ITGB1BP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12A9,559,416 - 9,576,899 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A9,556,857 - 9,577,155 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02A9,396,553 - 9,413,408 (-)NCBIMhudiblu_PPA_v0panPan3
ITGB1BP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1176,524,602 - 6,537,321 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl176,524,613 - 6,537,233 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha176,452,429 - 6,465,110 (-)NCBI
ROS_Cfam_1.0176,623,442 - 6,636,129 (-)NCBI
UMICH_Zoey_3.1176,515,976 - 6,528,650 (-)NCBI
UNSW_CanFamBas_1.0176,518,396 - 6,531,054 (-)NCBI
UU_Cfam_GSD_1.0176,531,756 - 6,544,438 (-)NCBI
Itgb1bp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629251,047,715 - 51,059,189 (-)NCBI
SpeTri2.0NW_0049365325,802,761 - 5,814,226 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ITGB1BP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3126,905,809 - 126,923,981 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13126,905,779 - 126,921,961 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23135,174,258 - 135,295,240 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ITGB1BP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11498,226,666 - 98,244,094 (+)NCBI
ChlSab1.1 Ensembl1498,230,100 - 98,248,862 (+)Ensembl
Vero_WHO_p1.0NW_02366604514,079,143 - 14,096,391 (-)NCBI
Itgb1bp1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624969290,601 - 307,152 (+)NCBI

Position Markers
AI449260  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381221,271,368 - 21,271,451UniSTSGRCm38
MGSCv371221,277,229 - 21,277,312UniSTSGRCm37
Celera1219,633,488 - 19,633,571UniSTS
Cytogenetic Map12A1.2UniSTS
Whitehead/MRC_RH12191.51UniSTS
AU019480  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381221,269,758 - 21,269,892UniSTSGRCm38
MGSCv371221,275,619 - 21,275,753UniSTSGRCm37
Celera1219,635,047 - 19,635,181UniSTS
Cytogenetic Map12A1.2UniSTS
Whitehead/MRC_RH12193.0UniSTS
AJ001373  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381221,267,457 - 21,267,542UniSTSGRCm38
MGSCv371221,273,318 - 21,273,403UniSTSGRCm37
Celera1220,879,436 - 20,879,521UniSTS
Celera1219,637,364 - 19,637,449UniSTS
Cytogenetic Map12A1.2UniSTS
Whitehead/MRC_RH12193.67UniSTS
UniSTS:236815  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381221,269,758 - 21,269,962UniSTSGRCm38
MGSCv371221,275,619 - 21,275,823UniSTSGRCm37
Celera1219,634,977 - 19,635,181UniSTS
Cytogenetic Map12A1.2UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301393Dyscalc3_mdystrophic cardiac calcinosis 3 (mouse)Not determined12122368579Mouse
1301143Skull17_mskull morphology 17 (mouse)Not determined12122368579Mouse
10402496Lmr22_mleishmaniasis resistance 22 (mouse)Not determined12122368579Mouse
11039525Tbbr2_mTrypanosoma brucei brucei response 2 (mouse)12122368579Mouse
1301655Bmd12_mbone mineral density 12 (mouse)Not determined12124612697Mouse
1357519Vtbt12_mvertebral trabecular bone trait 12 (mouse)Not determined12124612697Mouse
4141296Femwf9_mfemur work to failure 9 (mouse)Not determined127870733Mouse
4141112Tglq2a_mtriglyceride QTL 2a (mouse)Not determined12127870733Mouse
4141436Chldq7_mcholesterol and HDL QTL 7 (mouse)Not determined12127870733Mouse
9850128Tglq5_mtriglyceride QTL 5 (mouse)Not determined12127870733Mouse
12910983Pifs1_mpeptide-induced fatal syndrome 1 (mouse)12130383077Mouse
1301925Ath6_matherosclerosis 6 (mouse)Not determined12132708755Mouse
1301207Circp1_mcircadian photosensitivity 1 (mouse)Not determined12133380338Mouse
4141660Nbwa1_mNZB and NZW autoimmunity 1 (mouse)Not determined1229013334290301Mouse
26884410Bzwq15_mbi-zygomatic width QTL 15, 16 week (mouse)12360000029700000Mouse
4142234Tmc1m3_mTmc1 modifier 3 (mouse)Not determined12536844076984429Mouse
1301163Eae16_msusceptibility to experimental allergic encephalomyelitis 16 (mouse)Not determined12767315941673302Mouse
13208568Bmiq11_mbody mass index QTL 11 (mouse)12800000040000000Mouse
1301037Cd4ts5_mCD4 T cell subset 5 (mouse)Not determined12830244542302582Mouse
1301723Fcsa7_mfemoral cross-sectional area 7 (mouse)Not determined12944100543441113Mouse
27226753Femd7_mfemur midshaft diameter 7, 10 week (mouse)12950000084100000Mouse
14746972Manh72_mmandible shape 72 (mouse)121056528244565282Mouse
10401249Bglu15_mblood glucose level 15 (mouse)Not determined121057064344570810Mouse
13207568Tcq14_mtotal cholesterol QTL 14 (mouse)121161000097210000Mouse
4141516slwr_mslowlearner (mouse)Not determined1234247646342615Mouse
10043977Obq34_mobesity QTL 34 (mouse)Not determined121509733249097332Mouse
1558978Cplaq10_mcircadian period of locomotor activity 10 (mouse)Not determined121529102578993590Mouse
26884413Bzwq9_mbi-zygomatic width QTL 9, 10 week (mouse)121610000047700000Mouse
1301574Lmblgq5_mlimb length QTL 5 (mouse)Not determined121754644680910109Mouse
15039339Nmrs29_mNAFLD-associated magnetic resonance shift 29 (mouse)121777585351775853Mouse
10043848Hdlq90_mHDL QTL 90 (mouse)Not determined121778994051790082Mouse
1300870Ath18_matherosclerosis 18 (mouse)Not determined121820996752210068Mouse
12904956Edlmmq10_mextensor digitorum longus muscle mass QTL 10 (mouse)121968983453689834Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1721
Count of miRNA genes:647
Interacting mature miRNAs:805
Transcripts:ENSMUST00000076260, ENSMUST00000172834, ENSMUST00000172962, ENSMUST00000173614, ENSMUST00000173688, ENSMUST00000173729
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001355609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_008403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011243816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC156032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ001373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK004172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK007635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK075577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK089937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210343 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC021151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC028772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE947737 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY085309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX238278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000076260   ⟹   ENSMUSP00000075609
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1221,269,806 - 21,286,284 (-)Ensembl
RefSeq Acc Id: ENSMUST00000172834   ⟹   ENSMUSP00000134508
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1221,271,288 - 21,286,185 (-)Ensembl
RefSeq Acc Id: ENSMUST00000173614
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1221,271,426 - 21,272,770 (-)Ensembl
RefSeq Acc Id: ENSMUST00000173688   ⟹   ENSMUSP00000133557
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1221,270,704 - 21,272,123 (-)Ensembl
RefSeq Acc Id: ENSMUST00000173729   ⟹   ENSMUSP00000134627
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1221,270,093 - 21,286,097 (-)Ensembl
RefSeq Acc Id: ENSMUST00000232072   ⟹   ENSMUSP00000156312
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1221,267,420 - 21,286,219 (-)Ensembl
RefSeq Acc Id: NM_001355609   ⟹   NP_001342538
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391221,319,803 - 21,336,285 (-)NCBI
GRCm381221,269,802 - 21,286,284 (-)NCBI
Sequence:
RefSeq Acc Id: NM_008403   ⟹   NP_032429
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391221,319,803 - 21,336,285 (-)NCBI
GRCm381221,269,802 - 21,286,284 (-)NCBI
MGSCv371221,275,667 - 21,292,098 (-)RGD
Celera1219,618,971 - 19,635,133 (+)RGD
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006514989   ⟹   XP_006515052
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391221,317,247 - 21,336,280 (-)NCBI
GRCm381221,267,246 - 21,286,292 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514990   ⟹   XP_006515053
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391221,317,247 - 21,336,253 (-)NCBI
GRCm381221,267,246 - 21,286,292 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011243816   ⟹   XP_011242118
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391221,320,692 - 21,336,280 (-)NCBI
GRCm381221,270,691 - 21,286,286 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_032429   ⟸   NM_008403
- UniProtKB: O35671 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006515052   ⟸   XM_006514989
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006515053   ⟸   XM_006514990
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_011242118   ⟸   XM_011243816
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: NP_001342538   ⟸   NM_001355609
RefSeq Acc Id: ENSMUSP00000134508   ⟸   ENSMUST00000172834
RefSeq Acc Id: ENSMUSP00000075609   ⟸   ENSMUST00000076260
RefSeq Acc Id: ENSMUSP00000156312   ⟸   ENSMUST00000232072
RefSeq Acc Id: ENSMUSP00000134627   ⟸   ENSMUST00000173729
RefSeq Acc Id: ENSMUSP00000133557   ⟸   ENSMUST00000173688
Protein Domains
PID

Promoters
RGD ID:8677992
Promoter ID:EPDNEW_M17025
Type:initiation region
Name:Itgb1bp1_1
Description:Mus musculus integrin beta 1 binding protein 1 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381221,286,193 - 21,286,253EPDNEW
RGD ID:6823080
Promoter ID:MM_KWN:11287
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_008403,   NM_018813,   UC007NDL.1,   UC007NDN.1,   UC007NDO.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361221,291,591 - 21,292,432 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1306802 AgrOrtholog
Ensembl Genes ENSMUSG00000062352 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000075609 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000133557 UniProtKB/TrEMBL
  ENSMUSP00000134508 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000134627 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000156312 UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000076260 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000172834 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000173688 UniProtKB/TrEMBL
  ENSMUST00000173729 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000232072 UniProtKB/Swiss-Prot
Gene3D-CATH 2.30.29.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Integrin-bd_ICAP-1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTB/PI_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:16413 UniProtKB/Swiss-Prot
MGD MGI:1306802 ENTREZGENE
NCBI Gene 16413 ENTREZGENE
PANTHER PTHR32055 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ICAP-1_inte_bdg UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Itgb1bp1 PhenoGen
SMART PTB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt G3UX55_MOUSE UniProtKB/TrEMBL
  ITBP1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3UGH2_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q542A8 UniProtKB/Swiss-Prot