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Imported Disease Annotations - OMIMTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | lacrimal duct obstruction | | ISO | RGD:1317196 | 7240710 | | OMIM | | |
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Imported Disease Annotations - OMIMTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | lacrimal duct obstruction | | ISO | RGD:1317196 | 7240710 | | OMIM | | |
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1. | Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90. |
2. | MGD data from the GO Consortium |
3. | Okazaki N, etal., DNA Res 2003 Aug 31;10(4):167-80. |
4. | Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73. |
5. | RGD automated import pipeline for gene-chemical interactions |
PMID:10349636 | PMID:11042159 | PMID:11076861 | PMID:12477932 | PMID:12765969 | PMID:12904583 | PMID:14610273 | PMID:15782199 | PMID:15850792 | PMID:16141072 | PMID:16141073 | PMID:16516881 |
PMID:17967808 | PMID:18799693 | PMID:21677750 | PMID:21873635 | PMID:25826454 | PMID:27328461 | PMID:27775065 |
Igsf3 (Mus musculus - house mouse) |
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IGSF3 (Homo sapiens - human) |
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Igsf3 (Rattus norvegicus - Norway rat) |
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Igsf3 (Chinchilla lanigera - long-tailed chinchilla) |
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IGSF3 (Pan paniscus - bonobo/pygmy chimpanzee) |
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IGSF3 (Canis lupus familiaris - dog) |
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Igsf3 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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IGSF3 (Sus scrofa - pig) |
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IGSF3 (Chlorocebus sabaeus - green monkey) |
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Igsf3 (Heterocephalus glaber - naked mole-rat) |
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D3Mit312 |
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UniSTS:234782 |
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UniSTS:234783 |
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The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
RefSeq Transcripts | NM_001404406 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_001404407 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001404408 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_207205 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006502342 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006502343 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_030252915 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_036163417 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC131184 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AK006042 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK012857 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK019524 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK045721 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK052454 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK082772 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK083000 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK084011 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK129151 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK196671 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC052892 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH466608 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSMUST00000043983 ⟹ ENSMUSP00000048900 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000195164 ⟹ ENSMUSP00000141823 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000198995 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_207205 ⟹ NP_997088 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006502342 ⟹ XP_006502405 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006502343 ⟹ XP_006502406 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_030252915 ⟹ XP_030108775 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_036163417 ⟹ XP_036019310 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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Sequence: |
Protein RefSeqs | NP_001391335 | (Get FASTA) | NCBI Sequence Viewer |
NP_001391336 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001391337 | (Get FASTA) | NCBI Sequence Viewer | |
NP_997088 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006502405 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006502406 | (Get FASTA) | NCBI Sequence Viewer | |
XP_030108775 | (Get FASTA) | NCBI Sequence Viewer | |
XP_036019310 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAH52892 | (Get FASTA) | NCBI Sequence Viewer |
BAC32470 | (Get FASTA) | NCBI Sequence Viewer | |
BAC35000 | (Get FASTA) | NCBI Sequence Viewer | |
BAC97961 | (Get FASTA) | NCBI Sequence Viewer | |
EDL07628 | (Get FASTA) | NCBI Sequence Viewer | |
Q6ZQA6 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_997088 ⟸ NM_207205 |
- Peptide Label: | precursor |
- UniProtKB: | Q6ZQA6 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_006502405 ⟸ XM_006502342 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A0A6YX40 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006502406 ⟸ XM_006502343 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A0A6YX40 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_030108775 ⟸ XM_030252915 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | ENSMUSP00000048900 ⟸ ENSMUST00000043983 |
RefSeq Acc Id: | ENSMUSP00000141823 ⟸ ENSMUST00000195164 |
RefSeq Acc Id: | XP_036019310 ⟸ XM_036163417 |
- Peptide Label: | isoform X2 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q6ZQA6-F1-model_v2 | AlphaFold | Q6ZQA6 | 1-1194 | view protein structure |
RGD ID: | 6833976 | ||||||||
Promoter ID: | MM_KWN:35544 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | Lung | ||||||||
Transcripts: | UC008QRH.1 | ||||||||
Position: |
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RGD ID: | 6833975 | ||||||||
Promoter ID: | MM_KWN:35543 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | 3T3L1_Day0 | ||||||||
Transcripts: | UC008QRG.1 | ||||||||
Position: |
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RGD ID: | 6833372 | ||||||||
Promoter ID: | MM_KWN:35545 | ||||||||
Type: | Non-CpG | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | Brain, Kidney, Lung | ||||||||
Transcripts: | UC008QRI.1 | ||||||||
Position: |
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RGD ID: | 6881818 | ||||||||
Promoter ID: | EPDNEW_M4360 | ||||||||
Type: | initiation region | ||||||||
Name: | Igsf3_1 | ||||||||
Description: | Mus musculus immunoglobulin superfamily, member 3 , mRNA. | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | MGI:1926158 | AgrOrtholog |
Ensembl Genes | ENSMUSG00000042035 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Ensembl Protein | ENSMUSP00000048900 | ENTREZGENE, UniProtKB/Swiss-Prot |
ENSMUSP00000141823 | ENTREZGENE, UniProtKB/TrEMBL | |
Ensembl Transcript | ENSMUST00000043983 | ENTREZGENE, UniProtKB/Swiss-Prot |
ENSMUST00000195164 | ENTREZGENE, UniProtKB/TrEMBL | |
Gene3D-CATH | 2.60.40.10 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
InterPro | Ig-like_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Ig-like_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Ig-like_fold | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Ig_sub | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Ig_V-set | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | mmu:78908 | UniProtKB/Swiss-Prot |
MGD | MGI:1926158 | ENTREZGENE |
NCBI Gene | 78908 | ENTREZGENE |
Pfam | V-set | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PhenoGen | Igsf3 | PhenoGen |
PROSITE | IG_LIKE | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
SMART | IGv | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
SM00409 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Superfamily-SCOP | SSF48726 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
UniProt | A0A0A6YX40 | ENTREZGENE, UniProtKB/TrEMBL |
IGSF3_MOUSE | UniProtKB/Swiss-Prot, ENTREZGENE | |
UniProt Secondary | A0A4X9 | UniProtKB/Swiss-Prot |
Q7TPV3 | UniProtKB/Swiss-Prot |