Ciao2a (cytosolic iron-sulfur assembly component 2A) - Rat Genome Database

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Gene: Ciao2a (cytosolic iron-sulfur assembly component 2A) Mus musculus
Analyze
Symbol: Ciao2a
Name: cytosolic iron-sulfur assembly component 2A
RGD ID: 1316701
MGI Page MGI
Description: Predicted to enable metal ion binding activity. Predicted to be involved in iron-sulfur cluster assembly and protein maturation by iron-sulfur cluster transfer. Predicted to be located in cytosol and nucleoplasm. Predicted to be part of cytosolic [4Fe-4S] assembly targeting complex. Is expressed in liver. Orthologous to human CIAO2A (cytosolic iron-sulfur assembly component 2A).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 5730536A07Rik; Fam9; Fam96a; family with sequence similarity 96, member A; MIP18 family protein FAM96A
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39966,033,878 - 66,046,250 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl966,033,893 - 66,046,237 (+)EnsemblGRCm39 Ensembl
GRCm38966,126,596 - 66,138,968 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl966,126,611 - 66,138,955 (+)EnsemblGRCm38mm10GRCm38
MGSCv37965,974,418 - 65,986,775 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36965,924,617 - 65,936,974 (+)NCBIMGSCv36mm8
Celera963,362,237 - 63,374,668 (+)NCBICelera
Cytogenetic Map9CNCBI
cM Map935.73NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Iron-sulfur cluster biogenesis in mammalian cells: New insights into the molecular mechanisms of cluster delivery. Maio N and Rouault TA, Biochim Biophys Acta. 2015 Jun;1853(6):1493-512. doi: 10.1016/j.bbamcr.2014.09.009. Epub 2014 Sep 19.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Biogenesis of cytosolic and nuclear iron-sulfur proteins and their role in genome stability. Paul VD and Lill R, Biochim Biophys Acta. 2015 Jun;1853(6):1528-39. doi: 10.1016/j.bbamcr.2014.12.018. Epub 2015 Jan 10.
6. Mouse MP Annotation Import Pipeline RGD automated import pipeline
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073  
PMID:18799693   PMID:21267068   PMID:21677750   PMID:21873635   PMID:22683786   PMID:23891004   PMID:30973865   PMID:31803631   PMID:32325033   PMID:33232517   PMID:36150559   PMID:38355793  
PMID:38713713  


Genomics

Comparative Map Data
Ciao2a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39966,033,878 - 66,046,250 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl966,033,893 - 66,046,237 (+)EnsemblGRCm39 Ensembl
GRCm38966,126,596 - 66,138,968 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl966,126,611 - 66,138,955 (+)EnsemblGRCm38mm10GRCm38
MGSCv37965,974,418 - 65,986,775 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36965,924,617 - 65,936,974 (+)NCBIMGSCv36mm8
Celera963,362,237 - 63,374,668 (+)NCBICelera
Cytogenetic Map9CNCBI
cM Map935.73NCBI
CIAO2A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381564,072,565 - 64,093,838 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1564,072,565 - 64,094,262 (-)EnsemblGRCh38hg38GRCh38
GRCh371564,364,764 - 64,386,037 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361562,151,814 - 62,173,260 (-)NCBINCBI36Build 36hg18NCBI36
Celera1541,244,173 - 41,265,622 (-)NCBICelera
Cytogenetic Map15q22.31NCBI
HuRef1541,189,395 - 41,210,854 (-)NCBIHuRef
CHM1_11564,484,272 - 64,505,725 (-)NCBICHM1_1
T2T-CHM13v2.01561,879,723 - 61,900,991 (-)NCBIT2T-CHM13v2.0
Ciao2a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8875,565,620 - 75,577,542 (+)NCBIGRCr8
mRatBN7.2866,670,533 - 66,682,455 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl866,670,483 - 66,682,455 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx872,183,136 - 72,195,001 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0870,456,195 - 70,468,054 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0868,326,000 - 68,337,909 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0871,786,336 - 71,798,258 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl871,786,310 - 71,798,266 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0871,455,249 - 71,467,171 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4870,410,776 - 70,422,702 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1870,429,829 - 70,441,755 (+)NCBI
Celera866,058,924 - 66,070,845 (+)NCBICelera
Cytogenetic Map8q24NCBI
Ciao2a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545011,306,099 - 11,331,758 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545011,306,099 - 11,327,688 (+)NCBIChiLan1.0ChiLan1.0
CIAO2A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21653,327,864 - 53,351,078 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11557,503,133 - 57,526,346 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01543,025,577 - 43,047,013 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11561,317,188 - 61,338,337 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1561,317,188 - 61,338,337 (-)Ensemblpanpan1.1panPan2
CIAO2A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13028,582,048 - 28,597,856 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3028,582,902 - 28,597,748 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3028,501,777 - 28,517,587 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03028,758,001 - 28,773,814 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3028,758,012 - 28,773,776 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13028,692,569 - 28,708,362 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03028,755,102 - 28,770,923 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03028,993,565 - 29,009,399 (-)NCBIUU_Cfam_GSD_1.0
Ciao2a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640106,699,806 - 106,719,929 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647124,548,235 - 24,567,792 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647124,547,862 - 24,568,003 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CIAO2A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1107,951,646 - 107,969,298 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11107,951,618 - 107,969,306 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
CIAO2A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12619,448,702 - 19,470,212 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2619,448,903 - 19,469,756 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666048121,923,113 - 121,945,326 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ciao2a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247818,467,683 - 8,485,677 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247818,467,682 - 8,485,677 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ciao2a
259 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:178
Count of miRNA genes:148
Interacting mature miRNAs:166
Transcripts:ENSMUST00000034945
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300563Pgia5_mproteoglycan induced arthritis 5 (mouse)Not determined94883105682831177Mouse
13525007Lfhrvq1_mlow frequency time index heart rate varaiblity, QTL 1 (mouse)95878431868556008Mouse
1301456Adip5_madiposity 5 (mouse)Not determined95936994693370128Mouse
1301972Cocrb8_mcocaine related behavior 8 (mouse)Not determined93503447869034599Mouse
12790986Pcho9_mplasma cholesterol 9 (mouse)93809957572099575Mouse
12790990Tgl7_mtriglyceride 7 (mouse)95455996088559960Mouse
1558872Ibdq1_minflammatory bowel disease QTL 1 (mouse)Not determined93397884073439255Mouse
14746993Manh66_mmandible shape 66 (mouse)94981404883814048Mouse
12790992Arlsq1_maortic root lesion size QTL 1 (mouse)93809957572099575Mouse
12738449Spcq2_msperm count QTL 2 (mouse)93939988573399885Mouse
1301184Bdln4_mbody length 4 (mouse)Not determined95015132084151448Mouse
4141676Neogq1_mneonatal growth QTL 1 (mouse)Not determined95780504786121973Mouse
1301702Brm1_mbrachyury modifier 1 (mouse)Not determined94080504774805204Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63239711120191934Mouse
1301252Etohc3_methanol consumption 3 (mouse)Not determined93503447869034599Mouse
4141224Dxmod_mdoxorubicin nephropathy modifier (mouse)Not determined49452421101406120Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963239711120191934Mouse
13207569Tcq13_mtotal cholesterol QTL 13 (mouse)959897283109089068Mouse
1357709Si5lq3_mserum IGFBP-5 level QTL 3 (mouse)Not determined93311102567111140Mouse
12791002Arlsq2_maortic root lesion size QTL 2 (mouse)93809957572099575Mouse
10043971Obq32_mobesity QTL 32 (mouse)Not determined93781952871819528Mouse
10045639Heal28_mwound healing/regeneration 28 (mouse)Not determined94348071477480860Mouse
13525008Hrtiq1_mheart rate time index, QTL 1 (mouse)95242609868556008Mouse
4141148Cq5_mcholesterol QTL 5 (mouse)Not determined93245242166452546Mouse
1300848Skull13_mskull morphology 13 (mouse)Not determined95936994693370128Mouse
11081165Psl6_mpromotion susceptibility QTL 6 (mouse)96504119195522808Mouse
4142042Alpq3_malcohol preference QTL 3 (mouse)Not determined93730619798701707Mouse
1301558Stheal8_msoft tissue heal 8 (mouse)Not determined94348071477480860Mouse
1301172Fembrs6_mfemur breaking strength 6 (mouse)Not determined95902438793024534Mouse
1301435Trigq1_mtriglyceride QTL 1 (mouse)Not determined94442817478428262Mouse
5491195Mobq8_mmultigenic obesity QTL 8 (mouse)Not determined95936994693370128Mouse
1301049El4_mepilepsy 4 (mouse)Not determined94942029867151448Mouse
1301241Renf1_mrenal failure 1 (mouse)Not determined95203447899792481Mouse
1301692Hts_mhypothermia sensitivity (mouse)Not determined93251117266511421Mouse
1558968Tbdr1_mbody temperature response to dietary restriction, QTL 1 (mouse)Not determined93503447869034599Mouse
4141071Ath29_matherosclerosis 29 (mouse)Not determined94041959474607925Mouse
4141323Ptnu3_mproteinuria 3 (mouse)Not determined93288970266889836Mouse
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63239711120191934Mouse
1302180Actd4_mactivity-distance traveled 4 (mouse)Not determined93243456366434857Mouse
1301803Stheal9_msoft tissue heal 9 (mouse)Not determined95902438793024534Mouse
1301611Lrnx3_mlearning contextual 3 (mouse)Not determined96214976796149881Mouse
1301290Smgd1_msubmucosal gland distribution 1 (mouse)Not determined96583105686577967Mouse
13208563Bmiq8_mbody mass index QTL 8 (mouse)92491129668907282Mouse
10043877Adip21_madiposity 21 (mouse)Not determined95643910890439255Mouse
1301549Bbaa9_mB.burgdorferi-associated arthritis 9 (mouse)Not determined95780504771481754Mouse
1300716Cd4ts4_mCD4 T cell subset 4 (mouse)Not determined94883105682831177Mouse

Markers in Region
RH126556  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38966,138,627 - 66,138,846UniSTSGRCm38
GRCm38253,552,556 - 53,552,775UniSTSGRCm38
MGSCv37965,986,434 - 65,986,653UniSTSGRCm37
MGSCv37253,411,590 - 53,411,809UniSTSGRCm37
Celera963,374,327 - 63,374,546UniSTS
Celera255,302,306 - 55,302,525UniSTS
Cytogenetic Map9DUniSTS
Cytogenetic Map2C1.1UniSTS
RH66054  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38253,552,018 - 53,552,205UniSTSGRCm38
MGSCv37253,411,052 - 53,411,239UniSTSGRCm37
Celera255,301,768 - 55,301,955UniSTS
Cytogenetic Map2C1.1UniSTS
Cytogenetic Map9DUniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001359210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_026635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011242805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC112676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC124439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK003870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK179061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC005745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE655498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000034945   ⟹   ENSMUSP00000034945
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl966,033,893 - 66,046,237 (+)Ensembl
GRCm38.p6 Ensembl966,126,611 - 66,138,955 (+)Ensembl
RefSeq Acc Id: NM_001359210   ⟹   NP_001346139
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39966,033,893 - 66,046,250 (+)NCBI
GRCm38966,126,611 - 66,138,968 (+)NCBI
Sequence:
RefSeq Acc Id: NM_026635   ⟹   NP_080911
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39966,033,893 - 66,046,250 (+)NCBI
GRCm38966,126,611 - 66,138,968 (+)ENTREZGENE
MGSCv37965,974,418 - 65,986,775 (+)RGD
Celera963,362,237 - 63,374,668 (+)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_011242805   ⟹   XP_011241107
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39966,033,878 - 66,046,244 (+)NCBI
GRCm38966,126,596 - 66,138,962 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036155224   ⟹   XP_036011117
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39966,033,936 - 66,046,243 (+)NCBI
Sequence:
RefSeq Acc Id: NP_080911   ⟸   NM_026635
- Peptide Label: isoform 1
- UniProtKB: Q3TD02 (UniProtKB/Swiss-Prot),   Q9D171 (UniProtKB/Swiss-Prot),   Q9DCL2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011241107   ⟸   XM_011242805
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: NP_001346139   ⟸   NM_001359210
- Peptide Label: isoform 2 precursor
Ensembl Acc Id: ENSMUSP00000034945   ⟸   ENSMUST00000034945
RefSeq Acc Id: XP_036011117   ⟸   XM_036155224
- Peptide Label: isoform X1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9DCL2-F1-model_v2 AlphaFold Q9DCL2 1-160 view protein structure

Promoters
RGD ID:6844519
Promoter ID:MM_KWN:57814
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_026635,   OTTMUST00000078785
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36965,974,246 - 65,974,827 (+)MPROMDB
RGD ID:8670106
Promoter ID:EPDNEW_M13040
Type:initiation region
Name:Fam96a_2
Description:Mus musculus family with sequence similarity 96, member A , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M13041  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38966,126,681 - 66,126,741EPDNEW
RGD ID:8670020
Promoter ID:EPDNEW_M13041
Type:initiation region
Name:Fam96a_1
Description:Mus musculus family with sequence similarity 96, member A , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M13040  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38966,126,820 - 66,126,880EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1915500 AgrOrtholog
Ensembl Genes ENSMUSG00000032381 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000034945 ENTREZGENE
  ENSMUST00000034945.6 UniProtKB/Swiss-Prot
Gene3D-CATH 3.30.300.130 UniProtKB/Swiss-Prot
  6.10.250.1280 UniProtKB/Swiss-Prot
InterPro FSCA_dom_sf UniProtKB/Swiss-Prot
  MIP18 UniProtKB/Swiss-Prot
  MIP18-like UniProtKB/Swiss-Prot
KEGG Report mmu:68250 UniProtKB/Swiss-Prot
MGD MGI:1915500 ENTREZGENE
NCBI Gene 68250 ENTREZGENE
PANTHER CYTOSOLIC IRON-SULFUR ASSEMBLY COMPONENT 2A UniProtKB/Swiss-Prot
  PTHR12377 UniProtKB/Swiss-Prot
Pfam FeS_assembly_P UniProtKB/Swiss-Prot
PhenoGen Ciao2a PhenoGen
Superfamily-SCOP SSF117916 UniProtKB/Swiss-Prot
UniProt CIA2A_MOUSE UniProtKB/Swiss-Prot
  Q3TD02 ENTREZGENE
  Q9D171 ENTREZGENE
  Q9DCL2 ENTREZGENE
UniProt Secondary Q3TD02 UniProtKB/Swiss-Prot
  Q9D171 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-08-14 Ciao2a  cytosolic iron-sulfur assembly component 2A  Fam96a  family with sequence similarity 96, member A  Symbol and/or name change 5135510 APPROVED