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Gene: CARF (calcium responsive transcription factor) Homo sapiens
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Symbol: CARF
Name: calcium responsive transcription factor
Description: Exhibits DNA binding activity and DNA-binding transcription factor activity. Involved in cellular response to potassium ion and positive regulation of transcription from RNA polymerase II promoter in response to calcium ion. Predicted to localize to nucleus; INTERACTS WITH aflatoxin B1; benzo[a]pyrene; butanal.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: ALS2CR8; amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8; amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8 protein; calcium-response factor; calcium-responsive transcription factor; DKFZp667N246; FLJ12675; FLJ21579; NYD-SP24; testis development protein NYD-SP24
Orthologs:
Mus musculus (house mouse) : Carf (calcium response factor)  MGI  Alliance
Rattus norvegicus (Norway rat) : Carf (calcium responsive transcription factor)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Carf (calcium responsive transcription factor)
Pan paniscus (bonobo/pygmy chimpanzee) : CARF (calcium responsive transcription factor)
Canis lupus familiaris (dog) : CARF (calcium responsive transcription factor)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Carf (calcium responsive transcription factor)
Sus scrofa (pig) : CARF (calcium responsive transcription factor)
Chlorocebus sabaeus (African green monkey) : CARF (calcium responsive transcription factor)
Heterocephalus glaber (naked mole-rat) : Carf (calcium responsive transcription factor)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38 Ensembl2202,912,214 - 202,988,263 (+)EnsemblGRCh38hg38GRCh38
GRCh382202,912,218 - 202,988,263 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh372203,776,978 - 203,851,060 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362203,485,223 - 203,559,305 (+)NCBINCBI36hg18NCBI36
Build 342203,602,963 - 203,674,418NCBI
Celera2197,529,656 - 197,603,774 (+)NCBI
Cytogenetic Map2q33.2NCBI
HuRef2195,623,816 - 195,698,676 (+)NCBIHuRef
CHM1_12203,783,557 - 203,859,249 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on CARF
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1315654
Created: 2005-01-12
Species: Homo sapiens
Last Modified: 2020-06-18
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.