Pltp (phospholipid transfer protein) - Rat Genome Database

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Gene: Pltp (phospholipid transfer protein) Mus musculus
Analyze
Symbol: Pltp
Name: phospholipid transfer protein
RGD ID: 1315461
MGI Page MGI
Description: Enables lipid transfer activity. Acts upstream of or within flagellated sperm motility and vitamin E biosynthetic process. Located in extracellular space. Is expressed in several structures, including bone marrow; cardiovascular system; genitourinary system; humerus cartilage condensation; and oral region epithelium. Used to study dry eye syndrome. Orthologous to human PLTP (phospholipid transfer protein).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Bpi; Bpife; lipid transfer protein II; OD10; OD107
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392164,681,441 - 164,699,564 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2164,681,438 - 164,699,631 (-)EnsemblGRCm39 Ensembl
GRCm382164,839,518 - 164,857,708 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2164,839,518 - 164,857,711 (-)EnsemblGRCm38mm10GRCm38
MGSCv372164,665,018 - 164,683,208 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362164,530,723 - 164,548,913 (-)NCBIMGSCv36mm8
Celera2170,777,180 - 170,795,346 (-)NCBICelera
Cytogenetic Map2H3NCBI
cM Map285.27NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(R,R,R)-alpha-tocopherol  (EXP)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (EXP,ISO)
17beta-estradiol 3-benzoate  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (EXP)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3-chloropropane-1,2-diol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (EXP,ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-hydroxyphenyl retinamide  (EXP)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (ISO)
amiodarone  (EXP)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bezafibrate  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
butan-1-ol  (ISO)
butanal  (ISO)
C60 fullerene  (ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
carbon nanotube  (EXP)
chloropicrin  (ISO)
cisplatin  (EXP,ISO)
clobetasol  (EXP)
clofibrate  (EXP)
clofibric acid  (ISO)
Cuprizon  (ISO)
cytarabine  (ISO)
decabromodiphenyl ether  (ISO)
dexamethasone  (EXP,ISO)
dextran sulfate  (EXP)
diarsenic trioxide  (ISO)
dimethylarsinic acid  (ISO)
dioxygen  (EXP)
diuron  (ISO)
dorsomorphin  (ISO)
entinostat  (ISO)
epoxiconazole  (EXP)
ethanol  (ISO)
fenofibrate  (EXP)
fenthion  (EXP)
flutamide  (ISO)
fumonisin B1  (EXP)
gentamycin  (ISO)
GW 3965  (ISO)
GW 501516  (ISO)
high-density lipoprotein cholesterol  (ISO)
indometacin  (ISO)
inulin  (EXP)
isotretinoin  (ISO)
Lasiocarpine  (ISO)
lipopolysaccharide  (EXP)
metformin  (ISO)
methidathion  (EXP)
methotrexate  (EXP,ISO)
N-nitrosodiethylamine  (EXP,ISO)
nickel sulfate  (EXP)
nimesulide  (ISO)
obeticholic acid  (ISO)
ozone  (EXP)
paracetamol  (EXP,ISO)
paraquat  (EXP,ISO)
perfluorobutyric acid  (EXP)
perfluoroheptanoic acid  (EXP)
perfluorohexanesulfonic acid  (EXP)
perfluorononanoic acid  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (EXP)
perfluoropentanoic acid  (EXP)
phenobarbital  (EXP)
phenytoin  (EXP)
phosgene  (EXP)
pirinixic acid  (EXP)
propiconazole  (EXP)
quercetin  (ISO)
rotenone  (ISO)
sarin  (ISO)
SB 431542  (ISO)
silver atom  (EXP)
silver(0)  (EXP)
sodium arsenate  (EXP)
sodium arsenite  (EXP)
sunitinib  (ISO)
tamoxifen  (EXP)
temozolomide  (ISO)
testosterone  (ISO)
tetrachloromethane  (EXP)
thalidomide  (EXP)
thioacetamide  (ISO)
titanium dioxide  (EXP)
trichloroethene  (EXP,ISO)
triphenyl phosphate  (ISO)
troglitazone  (EXP)
valproic acid  (EXP,ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Elevation of plasma phospholipid transfer protein increases the risk of atherosclerosis despite lower apolipoprotein B-containing lipoproteins. Lie J, etal., J Lipid Res. 2004 May;45(5):805-11. Epub 2004 Mar 1.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. MGD IEA MGD IEA
4. Cell-associated and extracellular phospholipid transfer protein in human coronary atherosclerosis. O'Brien KD, etal., Circulation. 2003 Jul 22;108(3):270-4. Epub 2003 Jun 30.
5. Reverse cholesterol transport and cholesterol efflux in atherosclerosis. Ohashi R, etal., QJM. 2005 Dec;98(12):845-56. Epub 2005 Oct 28.
6. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
7. Mouse MP Annotation Import Pipeline RGD automated import pipeline
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. Serum phospholipid transfer protein mass as a possible protective factor for coronary heart diseases. Yatsuya H, etal., Circ J. 2004 Jan;68(1):11-6.
Additional References at PubMed
PMID:7615508   PMID:7654777   PMID:8645232   PMID:8661063   PMID:9099868   PMID:9339368   PMID:9602027   PMID:9616220   PMID:9828140   PMID:9892736   PMID:10079112   PMID:10229662  
PMID:10349636   PMID:10356658   PMID:10430081   PMID:10482304   PMID:10681411   PMID:10760573   PMID:10893412   PMID:11042159   PMID:11076861   PMID:11083872   PMID:11108726   PMID:11208732  
PMID:11217851   PMID:11433351   PMID:11573953   PMID:11716766   PMID:12105225   PMID:12117557   PMID:12177004   PMID:12401886   PMID:12477932   PMID:12612088   PMID:12837957   PMID:12855484  
PMID:12904583   PMID:14559902   PMID:14592843   PMID:14592847   PMID:14610273   PMID:15181537   PMID:15210842   PMID:15258196   PMID:15489334   PMID:15576481   PMID:15734742   PMID:15782199  
PMID:15832314   PMID:15863365   PMID:16141072   PMID:16141073   PMID:16467369   PMID:16554055   PMID:16687660   PMID:16782087   PMID:16825594   PMID:16829211   PMID:16944957   PMID:17038631  
PMID:17170377   PMID:17641249   PMID:17717294   PMID:17928634   PMID:17967808   PMID:18198166   PMID:18458077   PMID:18509527   PMID:18711210   PMID:18799693   PMID:19422933   PMID:19524061  
PMID:20037162   PMID:20418497   PMID:20543142   PMID:20864671   PMID:21267068   PMID:21454568   PMID:21514421   PMID:21787333   PMID:21873635   PMID:22367708   PMID:23303044   PMID:23830874  
PMID:23846500   PMID:24006456   PMID:24121956   PMID:24154525   PMID:24158769   PMID:24186868   PMID:24369175   PMID:24513285   PMID:24583261   PMID:25060793   PMID:25324570   PMID:25477345  
PMID:25638820   PMID:26023073   PMID:26160914   PMID:26320740   PMID:26857615   PMID:28137768   PMID:28378742   PMID:28765208   PMID:29680823   PMID:29731975   PMID:29735978   PMID:30337619  
PMID:30618663   PMID:30875130   PMID:31017809   PMID:31220615   PMID:31941380   PMID:33500240   PMID:33798923   PMID:34054798   PMID:35982498   PMID:36362012   PMID:37620514  


Genomics

Comparative Map Data
Pltp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392164,681,441 - 164,699,564 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2164,681,438 - 164,699,631 (-)EnsemblGRCm39 Ensembl
GRCm382164,839,518 - 164,857,708 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2164,839,518 - 164,857,711 (-)EnsemblGRCm38mm10GRCm38
MGSCv372164,665,018 - 164,683,208 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362164,530,723 - 164,548,913 (-)NCBIMGSCv36mm8
Celera2170,777,180 - 170,795,346 (-)NCBICelera
Cytogenetic Map2H3NCBI
cM Map285.27NCBI
PLTP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382045,898,620 - 45,912,155 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2045,898,621 - 45,912,155 (-)EnsemblGRCh38hg38GRCh38
GRCh372044,527,259 - 44,540,794 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362043,960,804 - 43,974,193 (-)NCBINCBI36Build 36hg18NCBI36
Build 342043,960,803 - 43,974,193NCBI
Celera2041,238,859 - 41,252,245 (-)NCBICelera
Cytogenetic Map20q13.12NCBI
HuRef2041,269,236 - 41,282,979 (-)NCBIHuRef
CHM1_12044,430,379 - 44,443,688 (-)NCBICHM1_1
T2T-CHM13v2.02047,635,115 - 47,648,212 (-)NCBIT2T-CHM13v2.0
Pltp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83173,994,162 - 174,011,982 (-)NCBIGRCr8
mRatBN7.23153,574,825 - 153,592,647 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3153,574,825 - 153,592,647 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3157,383,266 - 157,401,093 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03165,882,236 - 165,900,067 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03163,626,011 - 163,643,842 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03161,304,469 - 161,322,289 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3161,304,469 - 161,322,289 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03167,489,818 - 167,507,696 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43155,871,842 - 155,889,959 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13155,777,877 - 155,796,306 (-)NCBI
Celera3152,186,695 - 152,199,110 (-)NCBICelera
Cytogenetic Map3q42NCBI
Pltp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544511,384,723 - 11,399,217 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544511,384,723 - 11,399,217 (+)NCBIChiLan1.0ChiLan1.0
PLTP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22151,640,109 - 51,653,712 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12051,633,217 - 51,646,759 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02042,237,434 - 42,251,189 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12043,324,608 - 43,337,999 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2043,324,609 - 43,337,999 (-)Ensemblpanpan1.1panPan2
PLTP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12433,189,098 - 33,199,935 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2433,189,099 - 33,199,854 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2432,716,116 - 32,727,034 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02433,899,412 - 33,910,331 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2433,899,419 - 33,910,247 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12433,157,883 - 33,168,800 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02433,273,014 - 33,283,934 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02433,812,190 - 33,823,120 (-)NCBIUU_Cfam_GSD_1.0
Pltp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640191,667,291 - 191,677,832 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365147,121,023 - 7,131,475 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PLTP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1748,089,785 - 48,101,515 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11748,089,789 - 48,101,604 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21753,829,332 - 53,847,099 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PLTP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1217,972,054 - 17,986,100 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl217,972,215 - 17,988,701 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605066,611,503 - 66,625,773 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pltp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247908,673,089 - 8,685,942 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247908,673,212 - 8,686,094 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Pltp
722 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1289
Count of miRNA genes:540
Interacting mature miRNAs:639
Transcripts:ENSMUST00000059954, ENSMUST00000109316, ENSMUST00000109317, ENSMUST00000128110, ENSMUST00000142603, ENSMUST00000148912, ENSMUST00000156255
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
5491196Mobq6_mmultigenic obesity QTL 6 (mouse)Not determined285724269180896594Mouse
11038702Ltpr2_mLeishmania tropica response 2 (mouse)2103095716167212356Mouse
1301618Bglu1_mblood glucose level 1 (mouse)Not determined2117942930174324863Mouse
27226749Femd10_mfemur midshaft diameter 10, 16 week (mouse)2124441920168241920Mouse
1301961Bts1_mbladder tumor susceptibility 1 (mouse)Not determined2132024159166024330Mouse
11049567Lmr28f_mleishmaniasis resistance 28f (mouse)2133144911167145058Mouse
11049566Lmr28e_mleishmaniasis resistance 28e (mouse)2133144911167145058Mouse
11341717Rvfs1_mRift Valley fever susceptibility 1 (mouse)2135432544173449616Mouse
4141703Chlq13_mcirculating hormone level QTL 13 (mouse)Not determined2135699221169699361Mouse
1301907Rends_mrenal disease susceptibility (mouse)Not determined2135699221169699361Mouse
10043956Gnf5_mgrowth and fatness 5 (mouse)Not determined2135699221169699361Mouse
10054066Bwq9_mbody weight QTL 9 (mouse)Not determined2135699221169699361Mouse
1300846Pbwg11_mpostnatal body weight growth 11 (mouse)Not determined2138966600172966729Mouse
11353826Bdln10_mbody length 10 (mouse)2140441482174441482Mouse
12801461Intim1_mintima modifier 1 (mouse)2142428347176428450Mouse
12801456Intmrm1_mintima/media ratio modifier 1 (mouse)2142428347176428450Mouse
1301783Bhr1_mbronchial hyperresponsiveness 1 (mouse)Not determined2142593476178442452Mouse
1357484Bsbob_mBSB obesity (mouse)Not determined2143773445165665019Mouse
1558939Gnf1_mgrowth and fatness 1 (mouse)Not determined2143773445169117924Mouse
1300867Lore2_mloss of righting induced by ethanol 2 (mouse)Not determined2144515861180896594Mouse
1302013Tbbmd3_mtotal body bone mineral density 3 (mouse)Not determined2145196949179197085Mouse
1300806Aod4_mautoimmune ovarian dysgenesis 4 (mouse)Not determined2145228719179228841Mouse
1301865Hdlq19_mHDL QTL 19 (mouse)Not determined2145518775179518926Mouse
12790983Bwq12_mbody weight QTL 12 (mouse)2148238204181755017Mouse
4142211Nilac3_mnicotine induced locomotor activity 3 (mouse)Not determined2148664893181755017Mouse
1558917Gct8_mgranulosa cell tumorigenesis 8 (mouse)Not determined2149236907181755017Mouse
1300751Bdt1_mbone density traits 1 (mouse)Not determined2149988902181755017Mouse
1301085Lrnx10_mlearning-contextual 10 (mouse)Not determined2150212221181755017Mouse
11038701Ltpr2e_mLeishmania tropica response 2e (mouse)2150212221181755017Mouse
4142450Lmr16_mleishmaniasis resistance 16 (mouse)Not determined2150212221181755017Mouse
12910520Scgq3_mspontaneous crescentic glomerulonephritis QTL 3 (mouse)2151709273174389124Mouse
1301019Bmd6_mbone mineral density 6 (mouse)Not determined2151778297181755017Mouse
14747002Mancz3_mmandible centroid size 3 (mouse)2152329820181755017Mouse
1558867Gnf3_mgrowth and fatness 3 (mouse)Not determined2152699221169117924Mouse
1300622Cfld1_mcystic fibrosis lung disease 1 (mouse)Not determined2155823920181755017Mouse
1357537Lith12_mlithogenic gene 12 (mouse)Not determined2156196464181755017Mouse
1300688Nidd2k_mNidd2 on KK-A (mouse)Not determined2158078337178442452Mouse
12910800Pwgrq3_mpre-weaning growth rate QTL 3 (mouse)2160611165169794802Mouse
12910810Pwbwq2_mpre-weaning body weight QTL 2 (mouse)2160611165169794802Mouse
1302003Sluc17_msusceptibility to lung cancer 17 (mouse)Not determined2162433493181755017Mouse
1558991Tailq4_mtail length QTL 4 (mouse)Not determined2162736926178442452Mouse
1357435Epfq2_mepididymal fat pad weight QTL 2 (mouse)Not determined2162736926178442452Mouse
1301677Alcp6_malcohol preference locus 6 (mouse)Not determined2163486407181755017Mouse
1301348Alcp5_malcohol preference locus 5 (mouse)Not determined2163486407181755017Mouse
1300676Prdt2_mprion disease incubation time 2 (mouse)Not determined2164515154181755017Mouse

Markers in Region
RH136414  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382164,839,303 - 164,839,506UniSTSGRCm38
MGSCv372164,664,803 - 164,665,006UniSTSGRCm37
Celera2170,776,965 - 170,777,168UniSTS
Cytogenetic Map2H3UniSTS
cM Map296.0UniSTS
cM Map293.0UniSTS
U37226  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382164,839,579 - 164,839,660UniSTSGRCm38
MGSCv372164,665,079 - 164,665,160UniSTSGRCm37
Celera2170,777,241 - 170,777,322UniSTS
Cytogenetic Map2H3UniSTS
cM Map293.0UniSTS
cM Map296.0UniSTS
Whitehead/MRC_RH21883.83UniSTS
J05261  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382164,839,400 - 164,839,508UniSTSGRCm38
MGSCv372164,664,900 - 164,665,008UniSTSGRCm37
Celera2170,777,062 - 170,777,170UniSTS
Cytogenetic Map2H3UniSTS
cM Map293.0UniSTS
cM Map296.0UniSTS
Whitehead/MRC_RH21886.25UniSTS
Pltp  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv372164,677,077 - 164,678,013UniSTSGRCm37
Celera2170,789,220 - 170,790,156UniSTS
Cytogenetic Map2H3UniSTS
cM Map293.0UniSTS
cM Map293.0UniSTS
Pltp  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382164,851,577 - 164,852,513UniSTSGRCm38
MGSCv372164,677,077 - 164,678,013UniSTSGRCm37
Celera2170,789,220 - 170,790,156UniSTS
Cytogenetic Map2H3UniSTS
cM Map293.0UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000059954   ⟹   ENSMUSP00000061519
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2164,681,438 - 164,699,631 (-)Ensembl
GRCm38.p6 Ensembl2164,839,518 - 164,857,711 (-)Ensembl
RefSeq Acc Id: ENSMUST00000109316   ⟹   ENSMUSP00000104939
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2164,681,438 - 164,699,462 (-)Ensembl
GRCm38.p6 Ensembl2164,839,518 - 164,857,542 (-)Ensembl
RefSeq Acc Id: ENSMUST00000109317   ⟹   ENSMUSP00000104940
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2164,681,438 - 164,699,553 (-)Ensembl
GRCm38.p6 Ensembl2164,839,518 - 164,857,633 (-)Ensembl
RefSeq Acc Id: ENSMUST00000128110   ⟹   ENSMUSP00000122760
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2164,696,230 - 164,699,550 (-)Ensembl
GRCm38.p6 Ensembl2164,854,310 - 164,857,630 (-)Ensembl
RefSeq Acc Id: ENSMUST00000142603
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2164,688,733 - 164,698,716 (-)Ensembl
GRCm38.p6 Ensembl2164,846,813 - 164,856,796 (-)Ensembl
RefSeq Acc Id: ENSMUST00000148912
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2164,694,393 - 164,699,546 (-)Ensembl
GRCm38.p6 Ensembl2164,852,473 - 164,857,626 (-)Ensembl
RefSeq Acc Id: ENSMUST00000156255   ⟹   ENSMUSP00000119955
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2164,694,530 - 164,699,540 (-)Ensembl
GRCm38.p6 Ensembl2164,852,610 - 164,857,620 (-)Ensembl
RefSeq Acc Id: NM_001420692   ⟹   NP_001407621
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392164,681,441 - 164,699,564 (-)NCBI
RefSeq Acc Id: NM_001420693   ⟹   NP_001407622
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392164,681,441 - 164,689,786 (-)NCBI
RefSeq Acc Id: NM_011125   ⟹   NP_035255
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392164,681,441 - 164,699,564 (-)NCBI
GRCm382164,839,518 - 164,857,708 (-)NCBI
MGSCv372164,665,018 - 164,683,208 (-)RGD
Celera2170,777,180 - 170,795,346 (-)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_035255   ⟸   NM_011125
- Peptide Label: isoform a precursor
- UniProtKB: Q99L70 (UniProtKB/Swiss-Prot),   P55065 (UniProtKB/Swiss-Prot),   Q3UFS5 (UniProtKB/TrEMBL),   Q4FJT5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000061519   ⟸   ENSMUST00000059954
RefSeq Acc Id: ENSMUSP00000104939   ⟸   ENSMUST00000109316
RefSeq Acc Id: ENSMUSP00000104940   ⟸   ENSMUST00000109317
RefSeq Acc Id: ENSMUSP00000122760   ⟸   ENSMUST00000128110
RefSeq Acc Id: ENSMUSP00000119955   ⟸   ENSMUST00000156255
RefSeq Acc Id: NP_001407621   ⟸   NM_001420692
- Peptide Label: isoform a precursor
- UniProtKB: Q99L70 (UniProtKB/Swiss-Prot),   P55065 (UniProtKB/Swiss-Prot),   Q3UFS5 (UniProtKB/TrEMBL),   Q4FJT5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001407622   ⟸   NM_001420693
- Peptide Label: isoform b
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P55065-F1-model_v2 AlphaFold P55065 1-493 view protein structure

Promoters
RGD ID:6832083
Promoter ID:MM_KWN:32965
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Liver,   Lung
Transcripts:ENSMUST00000109316,   OTTMUST00000002264,   OTTMUST00000002265,   OTTMUST00000002267,   OTTMUST00000002268,   OTTMUST00000039374,   OTTMUST00000039375
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362164,682,566 - 164,683,317 (-)MPROMDB
RGD ID:6879700
Promoter ID:EPDNEW_M3301
Type:initiation region
Name:Pltp_1
Description:Mus musculus phospholipid transfer protein , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382164,857,641 - 164,857,701EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:103151 AgrOrtholog
Ensembl Genes ENSMUSG00000017754 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000059954 ENTREZGENE
  ENSMUST00000059954.14 UniProtKB/Swiss-Prot
  ENSMUST00000109316.8 UniProtKB/Swiss-Prot
  ENSMUST00000109317.10 UniProtKB/TrEMBL
  ENSMUST00000128110.2 UniProtKB/TrEMBL
  ENSMUST00000156255.8 UniProtKB/TrEMBL
InterPro Bactericidal_perm-incr_a/b_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BPI/LBP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BPI/LBP/Plunc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Lipid-bd_serum_glycop_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Lipid-bd_serum_glycop_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Lipid-bd_serum_glycop_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:18830 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:103151 ENTREZGENE
NCBI Gene 18830 ENTREZGENE
PANTHER PTHR10504 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10504:SF16 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam LBP_BPI_CETP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  LBP_BPI_CETP_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Pltp PhenoGen
PIRSF Lipid_binding_protein UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE LBP_BPI_CETP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART BPI1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BPI2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF55394 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A2A5K2_MOUSE UniProtKB/TrEMBL
  A2A5K3_MOUSE UniProtKB/TrEMBL
  A2A5K4_MOUSE UniProtKB/TrEMBL
  P55065 ENTREZGENE, UniProtKB/Swiss-Prot
  Q3UE59_MOUSE UniProtKB/TrEMBL
  Q3UFS5 ENTREZGENE, UniProtKB/TrEMBL
  Q4FJT5 ENTREZGENE, UniProtKB/TrEMBL
  Q99L70 ENTREZGENE
UniProt Secondary Q99L70 UniProtKB/Swiss-Prot