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Molecular Function

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Analyze GeneStrainQTL List |
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![]() Cellular Component Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | nucleoplasm | | ISO | UniProtKB:Q9NTI7 | 2290270 | | MGI | GO_REF:0000096, MGI:MGI:4834177 | nucleus | | ISO | UniProtKB:Q9NTI7 | 2290270 | | MGI | GO_REF:0000096, MGI:MGI:4834177 | nucleus | | IBA | PANTHER:PTN002007110 more ... | 2290270 | (PMID:21873635) | GO_Central | PMID:21873635 | |
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1. | MGD data from the GO Consortium |
2. | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
3. | RGD automated import pipeline for gene-chemical interactions |
PubMed | 10349636 11042159 11076861 11217851 12466851 12477932 12520002 16141072 16141073 21267068 21677750 21873635 25681390 26292052 27113764 |
Inka2 (Mus musculus - house mouse) |
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INKA2 (Homo sapiens - human) |
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Inka2 (Rattus norvegicus - Norway rat) |
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Inka2 (Chinchilla lanigera - long-tailed chinchilla) |
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INKA2 (Pan paniscus - bonobo/pygmy chimpanzee) |
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Inka2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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INKA2 (Sus scrofa - pig) |
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The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
RefSeq Transcripts | NM_001163356 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_175398 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006500859 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC139316 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AK033558 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK078368 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC052371 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BY290400 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH466608 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
LC028302 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
LC028303 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | NM_001163356 ⟹ NP_001156828 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
GAGTTGTGGAGGCTCGGCCAGATGTCAGGTCTGGGCTTGGGGAGTGCGCTGGGAGTGTGCGGGGhide sequence |
RefSeq Acc Id: | NM_175398 ⟹ NP_780607 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
TTGGCTGCTGCACTTTTCCTCCGCCCCTATCCCGGGCATTGAGCGGCAGCAGCGGGGAACGCCGhide sequence |
RefSeq Acc Id: | XM_006500859 ⟹ XP_006500922 | |||||||||
RefSeq Status: | ||||||||||
Type: | CODING | |||||||||
Position: |
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Sequence: |
ACCGGGCGGAAGCGGAGAGGAGAGGGGAGGAGAGGAGAGGAGAGGAGAGAGGATGCCAACTGGThide sequence |
Protein RefSeqs | NP_001156828 | (Get FASTA) | NCBI Sequence Viewer |
NP_780607 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006500922 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAH52371 | (Get FASTA) | NCBI Sequence Viewer |
BAC28358 | (Get FASTA) | NCBI Sequence Viewer | |
BAC37240 | (Get FASTA) | NCBI Sequence Viewer | |
BAS22087 | (Get FASTA) | NCBI Sequence Viewer | |
EDL07546 | (Get FASTA) | NCBI Sequence Viewer | |
EDL07547 | (Get FASTA) | NCBI Sequence Viewer | |
Q80VY2 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_780607 ⟸ NM_175398 |
- Peptide Label: | isoform 1 |
- UniProtKB: | Q80VY2 (UniProtKB/Swiss-Prot) |
- Sequence: |
MTKESKDMDCYLRRLKQELMSMKEVGDGLQDQMNCMMGALQELKLLQVQTALEQLEISGGTPTFhide sequence |
RefSeq Acc Id: | NP_001156828 ⟸ NM_001163356 |
- Peptide Label: | isoform 2 |
- UniProtKB: | Q80VY2 (UniProtKB/Swiss-Prot) |
- Sequence: |
MSMKEVGDGLQDQMNCMMGALQELKLLQVQTALEQLEISGGTPTFSCPESSQEQPECPRWQGSGhide sequence |
RefSeq Acc Id: | XP_006500922 ⟸ XM_006500859 |
- Peptide Label: | isoform X1 |
- Sequence: |
MTGTGIGRQWSGAGLLKRADRSLPCAGGQAGLLARSWGAGTARGPQLCWAWQSWRGCGGRLGRLhide sequence |
RGD ID: | 6833220 | |||||||||
Promoter ID: | MM_KWN:35654 | |||||||||
Type: | CpG-Island | |||||||||
SO ACC ID: | SO:0000170 | |||||||||
Source: | MPROMDB | |||||||||
Tissues & Cell Lines: | 3T3L1_Day1, Brain, ES_Cell, Lung, MEF_B4, MEF_B6 | |||||||||
Transcripts: | NM_001163356 | |||||||||
Position: |
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RGD ID: | 6881934 | |||||||||
Promoter ID: | EPDNEW_M4418 | |||||||||
Type: | multiple initiation site | |||||||||
Name: | Fam212b_1 | |||||||||
Description: | Mus musculus family with sequence similarity 212, member B ,transcript variant 2, mRNA. | |||||||||
SO ACC ID: | SO:0000170 | |||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | |||||||||
Experiment Methods: | Single-end sequencing. | |||||||||
Position: |
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RGD ID: | 6881936 | |||||||||
Promoter ID: | EPDNEW_M4419 | |||||||||
Type: | single initiation site | |||||||||
Name: | Fam212b_2 | |||||||||
Description: | Mus musculus family with sequence similarity 212, member B ,transcript variant 2, mRNA. | |||||||||
SO ACC ID: | SO:0000170 | |||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | |||||||||
Experiment Methods: | Single-end sequencing. | |||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | MGI:1923497 | AgrOrtholog |
Ensembl Genes | ENSMUSG00000048458 | ENTREZGENE, UniProtKB/Swiss-Prot |
Ensembl Protein | ENSMUSP00000069212 | ENTREZGENE, UniProtKB/Swiss-Prot |
ENSMUSP00000095874 | ENTREZGENE, UniProtKB/Swiss-Prot | |
Ensembl Transcript | ENSMUST00000066610 | ENTREZGENE, UniProtKB/Swiss-Prot |
ENSMUST00000098273 | ENTREZGENE, UniProtKB/Swiss-Prot | |
InterPro | FAM212 | UniProtKB/Swiss-Prot |
Inka | UniProtKB/Swiss-Prot | |
KEGG Report | mmu:109050 | UniProtKB/Swiss-Prot |
MGD | MGI:1923497 | ENTREZGENE |
NCBI Gene | 109050 | ENTREZGENE |
PANTHER | PTHR28615 | UniProtKB/Swiss-Prot |
Pfam | FAM212 | UniProtKB/Swiss-Prot |
PhenoGen | Inka2 | PhenoGen |
UniGene | Mm.212591 | ENTREZGENE |
UniProt | A0A0K2S4W3_MOUSE | UniProtKB/TrEMBL |
INKA2_MOUSE | UniProtKB/Swiss-Prot, ENTREZGENE | |
UniProt Secondary | Q8C5H0 | UniProtKB/Swiss-Prot |
Q8CCA1 | UniProtKB/Swiss-Prot |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2018-05-29 | Inka2 | inka box actin regulator 2 | Fam212b | family with sequence similarity 212, member B | Symbol and/or name change | 5135510 | APPROVED |
2012-11-27 | Fam212b | family with sequence similarity 212, member B | 6530418L21Rik | RIKEN cDNA 6530418L21 gene | Symbol and/or name change | 5135510 | APPROVED |
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More on Inka2 | |
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Alliance Gene |
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NCBI Gene |
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Ensembl Gene |
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JBrowse: mm9 mm10 |
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MGI Report |
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NCBI Genome Data Viewer |
RGD Object Information | |
RGD ID: | 1315194 |
Created: | 2005-01-12 |
Species: | Mus musculus |
Last Modified: | 2019-11-27 |
Status: | ACTIVE |
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.