Arap2 (ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2) - Rat Genome Database

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Gene: Arap2 (ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2) Mus musculus
Analyze
Symbol: Arap2
Name: ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
RGD ID: 1315078
MGI Page MGI
Description: Predicted to enable GTPase activator activity and phosphatidylinositol-3,4,5-trisphosphate binding activity. Predicted to be involved in signal transduction. Predicted to be active in cytoplasm. Orthologous to human ARAP2 (ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2; centaurin, delta 1; centaurin-delta-1; Centd; Centd1; cnt-d1; Gm148; mKIAA0580; PARX protein
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm336  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39562,759,788 - 62,923,874 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl562,759,788 - 62,923,502 (-)EnsemblGRCm39 Ensembl
GRCm38562,602,445 - 62,766,192 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl562,602,445 - 62,766,159 (-)EnsemblGRCm38mm10GRCm38
MGSCv37562,993,684 - 63,157,416 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36562,890,682 - 63,054,331 (-)NCBIMGSCv36mm8
Celera559,899,718 - 60,063,218 (-)NCBICelera
Cytogenetic Map5C3.1NCBI
cM Map532.04NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-butoxyethanol  (EXP)
2-hydroxypropanoic acid  (ISO)
3,3',5,5'-tetrabromobisphenol A  (EXP)
3-Nitrobenzanthrone  (ISO)
6-propyl-2-thiouracil  (ISO)
aflatoxin B1  (EXP,ISO)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (EXP,ISO)
amitrole  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsenite(3-)  (ISO)
azathioprine  (ISO)
benzo[a]pyrene  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (ISO)
cadmium dichloride  (EXP,ISO)
calcitriol  (ISO)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chlorpyrifos  (EXP)
cisplatin  (EXP,ISO)
clorgyline  (ISO)
coenzyme Q10  (ISO)
Cuprizon  (ISO)
cyclosporin A  (ISO)
DDT  (ISO)
dibutyl phthalate  (EXP)
dioxygen  (EXP)
dorsomorphin  (ISO)
doxorubicin  (ISO)
ethanol  (EXP)
fluoranthene  (EXP)
fonofos  (ISO)
formaldehyde  (ISO)
hydrogen cyanide  (EXP)
leflunomide  (EXP)
lipopolysaccharide  (ISO)
mercury dibromide  (ISO)
methimazole  (ISO)
mono(2-ethylhexyl) phthalate  (EXP)
nickel sulfate  (ISO)
ochratoxin A  (ISO)
ozone  (EXP)
p-chloromercuribenzoic acid  (ISO)
panobinostat  (ISO)
paracetamol  (EXP,ISO)
parathion  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
phenobarbital  (EXP)
phenylmercury acetate  (ISO)
pirinixic acid  (EXP)
potassium chromate  (ISO)
potassium cyanide  (EXP)
pregnenolone 16alpha-carbonitrile  (ISO)
quercitrin  (ISO)
rac-lactic acid  (ISO)
rotenone  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sulfadimethoxine  (ISO)
terbufos  (ISO)
testosterone  (ISO)
tetrachloroethene  (EXP)
tetrachloromethane  (ISO)
tetraphene  (EXP)
thioacetamide  (ISO)
titanium dioxide  (EXP)
trichostatin A  (ISO)
triclosan  (ISO)
trimellitic anhydride  (EXP)
troglitazone  (EXP)
tungsten  (EXP)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (ISO)
vincristine  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11754636   PMID:12466851   PMID:12477932   PMID:12520002   PMID:12693553   PMID:15489334  
PMID:16141072   PMID:16141073   PMID:20978237   PMID:21267068   PMID:21677750   PMID:21873635   PMID:27476102   PMID:30973865  


Genomics

Comparative Map Data
Arap2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39562,759,788 - 62,923,874 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl562,759,788 - 62,923,502 (-)EnsemblGRCm39 Ensembl
GRCm38562,602,445 - 62,766,192 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl562,602,445 - 62,766,159 (-)EnsemblGRCm38mm10GRCm38
MGSCv37562,993,684 - 63,157,416 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36562,890,682 - 63,054,331 (-)NCBIMGSCv36mm8
Celera559,899,718 - 60,063,218 (-)NCBICelera
Cytogenetic Map5C3.1NCBI
cM Map532.04NCBI
ARAP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38436,005,404 - 36,244,784 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl435,948,221 - 36,244,514 (-)EnsemblGRCh38hg38GRCh38
GRCh37436,007,026 - 36,246,136 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36435,744,017 - 35,922,374 (-)NCBINCBI36Build 36hg18NCBI36
Build 34435,890,187 - 35,983,929NCBI
Celera436,507,143 - 36,685,553 (-)NCBICelera
Cytogenetic Map4p14NCBI
HuRef435,394,038 - 35,572,297 (-)NCBIHuRef
CHM1_1436,066,734 - 36,245,096 (-)NCBICHM1_1
T2T-CHM13v2.0435,974,325 - 36,213,757 (-)NCBIT2T-CHM13v2.0
Arap2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81450,921,323 - 51,120,972 (+)NCBIGRCr8
mRatBN7.21446,717,657 - 46,917,326 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1446,718,760 - 46,917,154 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1451,125,503 - 51,322,104 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01452,427,974 - 52,624,570 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01448,824,406 - 49,021,017 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01448,726,033 - 48,922,809 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1448,726,045 - 48,922,983 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01448,892,214 - 49,090,667 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41450,594,829 - 50,789,829 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11450,611,833 - 50,790,398 (+)NCBI
Celera1446,023,257 - 46,220,741 (+)NCBICelera
Cytogenetic Map14q11NCBI
Arap2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544310,537,758 - 10,717,301 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544310,537,763 - 10,719,329 (+)NCBIChiLan1.0ChiLan1.0
ARAP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2336,243,314 - 36,462,448 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1436,432,386 - 36,651,468 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0430,382,528 - 30,561,731 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1436,244,283 - 36,422,965 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl436,244,283 - 36,422,965 (-)Ensemblpanpan1.1panPan2
ARAP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1375,641,034 - 75,832,145 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl375,643,013 - 75,815,274 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha378,128,989 - 78,318,159 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0376,422,480 - 76,613,649 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl376,423,621 - 76,614,886 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1375,688,311 - 75,879,140 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0375,844,199 - 76,035,013 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0376,219,926 - 76,410,644 (+)NCBIUU_Cfam_GSD_1.0
Arap2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528541,730,685 - 41,930,525 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364824,386,934 - 4,553,332 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364824,385,788 - 4,567,646 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARAP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl827,771,423 - 27,960,542 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1827,771,413 - 27,960,564 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2829,137,042 - 29,327,243 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ARAP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12714,036,751 - 14,215,997 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2714,052,478 - 14,214,050 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604760,484,586 - 60,724,580 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Arap2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248404,635,818 - 4,793,179 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248404,635,446 - 4,809,618 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Arap2
6055 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:809
Count of miRNA genes:531
Interacting mature miRNAs:611
Transcripts:ENSMUST00000076623, ENSMUST00000159022, ENSMUST00000159470, ENSMUST00000160419, ENSMUST00000160620, ENSMUST00000161911
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301693Sle6_msystemic lupus erythematosus susceptibility 6 (mouse)Not determined5889069387841837Mouse
11537367Hmtb11_mhemostasis and thrombosis 11 (mouse)52210082364806579Mouse
11341716Rvfs3_mRift Valley fever susceptibility 3 (mouse)526441234138455402Mouse
1301555Alcp10_malcohol preference locus 10 (mouse)Not determined53102427565024480Mouse
1301403Alcp9_malcohol preference locus 9 (mouse)Not determined53102427565024480Mouse
11353827Hplq1_mhot plate latency 1 (mouse)53157045865570458Mouse
4140990Lgq6_mlate growth QTL 6 (mouse)Not determined32133234100777931Mouse
4141219W10q16_mweight 10 weeks QTL 16 (mouse)Not determined32133234100777931Mouse
10043995Hbnr9_mHeligmosomoides bakeri nematode resistance 9 (mouse)Not determined53348866767488876Mouse
1301845Lxw4_mlupus BXSB x NZW 4 (mouse)Not determined53569446269694594Mouse
11049561Lmr24e_mleishmaniasis resistance 24e (mouse)53569446269694594Mouse
11049559Lmr24c_mleishmaniasis resistance 24c (mouse)53569446269694594Mouse
11049558Lmr24b_mleishmaniasis resistance 24b (mouse)53569446269694594Mouse
1301223Hdlq7_mHDL QTL 7 (mouse)Not determined53585456869854714Mouse
13464252Ahl10_mage related hearing loss, early onset 10 (mouse)53585456869854714Mouse
4141647Hrvhf1_mheart rate variability, high frequency 1 (mouse)Not determined3643342370433423Mouse
1301170Lith13_mlithogenic gene 13 (mouse)Not determined53649448670494598Mouse
1300926Hpi2_mhepatic PMN infiltration 2 (mouse)Not determined53758148864806579Mouse
1301524Lmb2_mlupus in MRL and B6 F2 cross (mouse)Not determined537581488112465722Mouse
13464246Ahl11_mage related hearing loss, early onset 11 (mouse)53764377771643896Mouse
1300951Gbvq1_mgallstone bladder volume QTL 1 (mouse)Not determined53811168172111798Mouse
13464245Ahl12_mage related hearing loss, early onset 12 (mouse)53811168172111798Mouse
1301698Pcfm4_mperiosteal circumference and femur length 4 (mouse)Not determined54458584378585965Mouse
13207584Mwmlpt4_mMorris water maze latency to platform, training, 4 (mouse)54632260680322606Mouse
13207588Mwmlpa4_mMorris water maze latency to platform, all, 4 (mouse)54632260680322606Mouse
14746981Manh57_mmandible shape 57 (mouse)54716974281169742Mouse
11041665Lmr24_mleishmaniasis resistance 24 (mouse)552694462107321041Mouse
11041899Lmr24a_mleishmaniasis resistance 24a (mouse)552694462107321041Mouse
4141473Lfnq1_mlung function QTL 1 (mouse)Not determined5441111064579648Mouse
4142064Tmc1m4_mTmc1 modifier 4 (mouse)Not determined554500177127001072Mouse
1301243Bmd2_mbone mineral density 2 (mouse)Not determined555388334100455525Mouse
4142317Rgcs1_mretinal ganglion cell susceptible 1 (mouse)Not determined55388334108762627Mouse
13464248Ahl13_mage related hearing loss, early onset 13 (mouse)55564587489645995Mouse
10043962Obq27_mobesity QTL 27 (mouse)Not determined55628565590285655Mouse
10044005Ahl7_mage related hearing loss 7 (mouse)Not determined55833050292330641Mouse
11040591Lmr3c_mleishmaniasis resistance 3c (mouse)55960280193602980Mouse
11040592Lmr3d_mleishmaniasis resistance 3d (mouse)55960280193602980Mouse
11040589Lmr3a_mleishmaniasis resistance 3a (mouse)55960280193602980Mouse
11040590Lmr3b_mleishmaniasis resistance 3b (mouse)55960280193602980Mouse
1301843Listr1_mlisteriosis resistance 1 (mouse)Not determined56024608194246203Mouse
13464247Ahl14_mage related hearing loss, early onset 14 (mouse)56040306294403160Mouse
11252124Modvl6_mmodifier of vacuolated lens 6 (mouse)56265056896650688Mouse
4142428Modvl1_mmodifier of vacuolated lens 1 (mouse)Not determined6265056896650688Mouse
1301010ahl2_mage related hearing loss 2 (mouse)Not determined56265056896650688Mouse
13464250Ahl15_mage related hearing loss, early onset 15 (mouse)56265056896650688Mouse

Markers in Region
RH127142  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38562,603,784 - 62,603,984UniSTSGRCm38
MGSCv37562,995,023 - 62,995,223UniSTSGRCm37
Celera559,901,057 - 59,901,257UniSTS
Cytogenetic Map5C3.1UniSTS
Whitehead/MRC_RH5856.73UniSTS
05.MMHAP17FRB8.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38562,765,446 - 62,765,628UniSTSGRCm38
MGSCv37563,156,685 - 63,156,867UniSTSGRCm37
Celera560,062,582 - 60,062,764UniSTS
Cytogenetic Map5C3.1UniSTS
Whitehead_YAC5 UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_178407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011240712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003955612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC122231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC124720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC135359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK037027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK039153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK041540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK084988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK122316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK134702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK136522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC018234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000076623   ⟹   ENSMUSP00000075924
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl562,759,788 - 62,923,463 (-)Ensembl
GRCm38.p6 Ensembl562,602,445 - 62,766,120 (-)Ensembl
RefSeq Acc Id: ENSMUST00000159470   ⟹   ENSMUSP00000124743
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl562,906,639 - 62,923,502 (-)Ensembl
GRCm38.p6 Ensembl562,749,296 - 62,766,159 (-)Ensembl
RefSeq Acc Id: ENSMUST00000160419
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl562,799,550 - 62,803,584 (-)Ensembl
GRCm38.p6 Ensembl562,642,207 - 62,646,241 (-)Ensembl
RefSeq Acc Id: ENSMUST00000160620
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl562,759,788 - 62,769,717 (-)Ensembl
GRCm38.p6 Ensembl562,602,445 - 62,612,374 (-)Ensembl
RefSeq Acc Id: ENSMUST00000161911
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl562,863,960 - 62,888,164 (-)Ensembl
GRCm38.p6 Ensembl562,706,617 - 62,730,821 (-)Ensembl
RefSeq Acc Id: ENSMUST00000200549
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl562,792,607 - 62,796,254 (-)Ensembl
GRCm38.p6 Ensembl562,635,264 - 62,638,911 (-)Ensembl
RefSeq Acc Id: ENSMUST00000201373
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl562,834,601 - 62,840,904 (-)Ensembl
GRCm38.p6 Ensembl562,677,258 - 62,683,561 (-)Ensembl
RefSeq Acc Id: NM_178407   ⟹   NP_848494
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39562,759,788 - 62,923,520 (-)NCBI
GRCm38562,602,445 - 62,766,177 (-)ENTREZGENE
MGSCv37562,993,684 - 63,157,416 (-)RGD
Celera559,899,718 - 60,063,218 (-)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006503828   ⟹   XP_006503891
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39562,759,794 - 62,923,874 (-)NCBI
GRCm38562,602,451 - 62,766,192 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006503829   ⟹   XP_006503892
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39562,759,794 - 62,923,874 (-)NCBI
GRCm38562,602,445 - 62,766,192 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011240712   ⟹   XP_011239014
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39562,759,794 - 62,923,205 (-)NCBI
GRCm38562,602,451 - 62,765,874 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030254348   ⟹   XP_030110208
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39562,759,794 - 62,923,874 (-)NCBI
GRCm38562,602,445 - 62,766,192 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036164979   ⟹   XP_036020872
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39562,759,794 - 62,923,874 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036164980   ⟹   XP_036020873
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39562,827,891 - 62,923,874 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003955612
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39562,811,496 - 62,923,874 (-)NCBI
GRCm38562,630,133 - 62,766,192 (-)NCBI
Sequence:
RefSeq Acc Id: NP_848494   ⟸   NM_178407
- UniProtKB: Q8VEL6 (UniProtKB/Swiss-Prot),   Q8C3T2 (UniProtKB/Swiss-Prot),   Q8BZ05 (UniProtKB/Swiss-Prot),   Q80TX2 (UniProtKB/Swiss-Prot),   E9QP44 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006503891   ⟸   XM_006503828
- Peptide Label: isoform X2
- UniProtKB: Q8VEL6 (UniProtKB/Swiss-Prot),   Q8C3T2 (UniProtKB/Swiss-Prot),   Q8BZ05 (UniProtKB/Swiss-Prot),   Q80TX2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006503892   ⟸   XM_006503829
- Peptide Label: isoform X3
- UniProtKB: Q8VEL6 (UniProtKB/Swiss-Prot),   Q8C3T2 (UniProtKB/Swiss-Prot),   Q8BZ05 (UniProtKB/Swiss-Prot),   Q80TX2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011239014   ⟸   XM_011240712
- Peptide Label: isoform X1
- UniProtKB: Q8VEL6 (UniProtKB/Swiss-Prot),   Q8C3T2 (UniProtKB/Swiss-Prot),   Q8BZ05 (UniProtKB/Swiss-Prot),   Q80TX2 (UniProtKB/Swiss-Prot),   E9QP44 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030110208   ⟸   XM_030254348
- Peptide Label: isoform X5
- UniProtKB: Q8VEL6 (UniProtKB/Swiss-Prot),   Q8C3T2 (UniProtKB/Swiss-Prot),   Q8BZ05 (UniProtKB/Swiss-Prot),   Q80TX2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: ENSMUSP00000124743   ⟸   ENSMUST00000159470
RefSeq Acc Id: ENSMUSP00000075924   ⟸   ENSMUST00000076623
RefSeq Acc Id: XP_036020872   ⟸   XM_036164979
- Peptide Label: isoform X4
- UniProtKB: Q8VEL6 (UniProtKB/Swiss-Prot),   Q8C3T2 (UniProtKB/Swiss-Prot),   Q8BZ05 (UniProtKB/Swiss-Prot),   Q80TX2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_036020873   ⟸   XM_036164980
- Peptide Label: isoform X6
Protein Domains
Arf-GAP   PH   Ras-associating   Rho-GAP   SAM

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8BZ05-F1-model_v2 AlphaFold Q8BZ05 1-1703 view protein structure

Promoters
RGD ID:6886728
Promoter ID:EPDNEW_M6815
Type:initiation region
Name:Arap2_1
Description:Mus musculus ArfGAP with RhoGAP domain, ankyrin repeat and PHdomain 2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38562,766,158 - 62,766,218EPDNEW
RGD ID:6837890
Promoter ID:MM_KWN:42328
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   ES_Cell,   Lung
Transcripts:NM_178407,   UC008XMB.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36563,157,259 - 63,157,759 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2684416 AgrOrtholog
Ensembl Genes ENSMUSG00000037999 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000076623 ENTREZGENE
  ENSMUST00000076623.8 UniProtKB/TrEMBL
  ENSMUST00000159470.3 UniProtKB/TrEMBL
Gene3D-CATH 1.10.150.50 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.10.220.150 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.10.555.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ARFGAP/RecO UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ArfGAP_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ArfGAP_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RA_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Rho_GTPase_activation_prot UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RhoGAP_ARAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RhoGAP_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM/pointed_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:212285 UniProtKB/TrEMBL
MGD MGI:2684416 ENTREZGENE
NCBI Gene 212285 ENTREZGENE
PANTHER ARF-GAP WITH RHO-GAP DOMAIN, ANK REPEAT AND PH DOMAIN-CONTAINING PROTEIN 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RHO GTPASE ACTIVATING PROTEIN AT 15B, ISOFORM C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ArfGap UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PF00169 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PF00788 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RhoGAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Arap2 PhenoGen
PRINTS REVINTRACTNG UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE ARFGAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH_DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PS50200 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RHOGAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM_DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ArfGap UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RhoGAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00233 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF47769 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48350 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF57863 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt ARAP2_MOUSE UniProtKB/Swiss-Prot
  E0CXD0_MOUSE UniProtKB/TrEMBL
  E9QP44 ENTREZGENE, UniProtKB/TrEMBL
  Q3UW93_MOUSE UniProtKB/TrEMBL
  Q80TX2 ENTREZGENE
  Q8BY88_MOUSE UniProtKB/TrEMBL
  Q8BYL0_MOUSE UniProtKB/TrEMBL
  Q8BZ05 ENTREZGENE
  Q8C3T2 ENTREZGENE
  Q8VEL6 ENTREZGENE
UniProt Secondary Q80TX2 UniProtKB/Swiss-Prot
  Q8C3T2 UniProtKB/Swiss-Prot
  Q8VEL6 UniProtKB/Swiss-Prot