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Gene: Clca1 (chloride channel accessory 1) Mus musculus
Symbol: Clca1
Name: chloride channel accessory 1
Description: Predicted to have intracellular calcium activated chloride channel activity. Predicted to be involved in chloride transport. Localizes to the integral component of membrane; microvillus; and secretory granule. Human ortholog(s) of this gene implicated in asthma and chronic obstructive pulmonary disease. Is expressed in genitourinary system; heart; rectum lumen; retina; and thymus. Orthologous to human CLCA1 (chloride channel accessory 1); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4,6-trinitrobenzenesulfonic acid.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: calcium-activated chloride channel family member 3; calcium-activated chloride channel regulator 1; chloride channel calcium activated 1; chloride channel calcium activated 2; chloride channel calcium activated 3; Clca2; Clca3; gob-5; gob5; mCLCA3; MGC143984; MGC143985
Homo sapiens (human) : CLCA1 (chloride channel accessory 1)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Clca1 (chloride channel accessory 1)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Clca1 (chloride channel accessory 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CLCA1 (chloride channel accessory 1)
Canis lupus familiaris (dog) : CLCA1 (chloride channel accessory 1)
Sus scrofa (pig) : CLCA1 (chloride channel accessory 1)
Chlorocebus sabaeus (African green monkey) : CLCA1 (chloride channel accessory 1)
Heterocephalus glaber (naked mole-rat) : Clca1 (chloride channel accessory 1)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
GRCm38 Ensembl3145,003,817 - 145,032,776 (-)Ensembl
GRCm383145,004,537 - 145,032,776 (-)NCBIGRCm38GRCm38mm10GRCm38
MGSCv373144,667,501 - 144,695,740 (-)NCBIGRCm37mm9NCBIm37
MGSCv363144,941,924 - 144,970,145 (-)NCBImm8
Celera3151,445,713 - 151,476,303 (-)NCBICelera
Cytogenetic Map3 H2NCBI
cM Map369.26NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Phenotype Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status



Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
Nomenclature History
More on Clca1
Alliance Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1314776
Created: 2005-01-12
Species: Mus musculus
Last Modified: 2019-11-27
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.