Radil (Ras association and DIL domains) - Rat Genome Database

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Gene: Radil (Ras association and DIL domains) Mus musculus
Analyze
Symbol: Radil
Name: Ras association and DIL domains
RGD ID: 1314609
MGI Page MGI
Description: Predicted to enable GTPase binding activity. Predicted to be involved in neural crest cell migration and substrate adhesion-dependent cell spreading. Predicted to act upstream of or within cell adhesion. Predicted to be part of protein-containing complex. Predicted to be active in microtubule. Is expressed in testis. Orthologous to human RADIL (Rap associating with DIL domain).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AI536456; D930005D10Rik; ras-associating and dilute domain-containing protein
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395142,470,594 - 142,536,873 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5142,470,594 - 142,536,853 (-)EnsemblGRCm39 Ensembl
GRCm385142,483,795 - 142,551,098 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5142,484,839 - 142,551,098 (-)EnsemblGRCm38mm10GRCm38
MGSCv375142,960,795 - 143,027,031 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365142,737,315 - 142,803,551 (-)NCBIMGSCv36mm8
Celera5139,539,520 - 139,606,082 (-)NCBICelera
Cytogenetic Map5G2NCBI
cM Map581.53NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:15368895   PMID:15489334   PMID:15747579   PMID:16141072  
PMID:16141073   PMID:17114649   PMID:17704304   PMID:18799693   PMID:21148109   PMID:21873635   PMID:23209302  


Genomics

Comparative Map Data
Radil
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395142,470,594 - 142,536,873 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5142,470,594 - 142,536,853 (-)EnsemblGRCm39 Ensembl
GRCm385142,483,795 - 142,551,098 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5142,484,839 - 142,551,098 (-)EnsemblGRCm38mm10GRCm38
MGSCv375142,960,795 - 143,027,031 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365142,737,315 - 142,803,551 (-)NCBIMGSCv36mm8
Celera5139,539,520 - 139,606,082 (-)NCBICelera
Cytogenetic Map5G2NCBI
cM Map581.53NCBI
RADIL
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3874,797,055 - 4,883,716 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl74,797,055 - 4,883,716 (-)EnsemblGRCh38hg38GRCh38
GRCh3774,836,686 - 4,923,347 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3674,805,266 - 4,889,861 (-)NCBINCBI36Build 36hg18NCBI36
Celera74,798,391 - 4,882,417 (-)NCBICelera
Cytogenetic Map7p22.1NCBI
HuRef74,755,550 - 4,838,928 (-)NCBIHuRef
CHM1_174,838,485 - 4,923,073 (-)NCBICHM1_1
T2T-CHM13v2.074,914,262 - 5,000,912 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v274,885,095 - 4,969,690 (-)NCBI
Radil
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81217,137,872 - 17,202,021 (+)NCBIGRCr8
mRatBN7.21212,024,395 - 12,088,540 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1212,024,395 - 12,088,540 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1212,826,887 - 12,890,790 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01213,450,118 - 13,514,021 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01212,481,238 - 12,545,147 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01214,092,541 - 14,156,704 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1214,092,541 - 14,156,704 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01216,120,532 - 16,185,309 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41212,420,877 - 12,485,651 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11212,450,944 - 12,515,270 (+)NCBI
Celera1213,807,057 - 13,871,056 (+)NCBICelera
Cytogenetic Map12p11NCBI
Radil
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546010,931,901 - 10,994,178 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495546010,906,944 - 10,990,369 (+)NCBIChiLan1.0ChiLan1.0
RADIL
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v269,765,330 - 9,849,949 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1758,090,038 - 58,174,653 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v075,051,784 - 5,136,345 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.175,092,131 - 5,130,716 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl75,092,131 - 5,130,716 (-)Ensemblpanpan1.1panPan2
LOC479761
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1612,718,243 - 12,845,186 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl612,717,693 - 12,845,196 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha614,188,679 - 14,316,046 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0612,854,072 - 12,981,532 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl612,853,662 - 12,981,542 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1612,664,990 - 12,792,207 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0612,597,907 - 12,725,235 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0612,900,295 - 13,001,428 (+)NCBIUU_Cfam_GSD_1.0
Radil
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344141,029,892 - 141,113,057 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367651,051,351 - 1,104,618 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367651,050,471 - 1,104,117 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RADIL
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl33,641,112 - 3,716,141 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.133,642,294 - 3,716,139 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.234,292,918 - 4,366,769 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RADIL
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12816,765,646 - 16,846,934 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2816,771,061 - 16,846,664 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660905,072,668 - 5,154,585 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in Radil
2168 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1528
Count of miRNA genes:563
Interacting mature miRNAs:680
Transcripts:ENSMUST00000063635, ENSMUST00000085758, ENSMUST00000110784, ENSMUST00000110785, ENSMUST00000129212, ENSMUST00000139278, ENSMUST00000139824, ENSMUST00000150380
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301362Prnr1_mprion resistance 1 (mouse)Not determined589418876146787935Mouse
10412197Bbaa25_mB.burgdorferi-associated arthritis 25 (mouse)Not determined5109167240143167381Mouse
13464251Ahl21_mage related hearing loss, early onset 21 (mouse)5109167240143167381Mouse
1300913Bwefm_mbody weight females and males day 10 (mouse)Not determined5109439348143439459Mouse
1301226Bbaa2_mB.burgdorferi-associated arthritis 2 (mouse)Not determined5115156883149157015Mouse
1300827Cora1_mcorrelation in cytokine production 1 (mouse)Not determined5115156883149157015Mouse
1301857Bglq14_mbody growth late QTL 14 (mouse)Not determined5118948964151758149Mouse
4141081Nidd7k_mNidd7 on KK-A (mouse)Not determined119945037149347326Mouse
11528552Scram1_mspinal cord resistance to astrocytoma modifier 1 (mouse)5121455402151758149Mouse
1301986Bpq4_mblood pressure QTL 4 (mouse)Not determined5121555236151758149Mouse
1302079Lbw3_mlupus NZB x NZW 3 (mouse)Not determined5124700335151758149Mouse
1301363Pbwg13_mpostnatal body weight growth 13 (mouse)Not determined5125133457151758149Mouse
4141218Ath24_matherosclerosis 24 (mouse)Not determined129520084151758149Mouse
12880406Jcdq2_mjoint cartilage degeneration QTL 2 (mouse)5129787831151758149Mouse
11049557Lmr26_mleishmaniasis resistance 26 (mouse)5133925558151758149Mouse
13504735Ifvrq7_minfluenza virus resistance QTL 7 (mouse)5139509801151658149Mouse
13504737Ifvrq5_minfluenza virus resistance QTL 5 (mouse)5139509801151658149Mouse
13504734Ifvrq4_minfluenza virus resistance QTL 4 (mouse)5139985755151658149Mouse

Markers in Region
D5Mit222  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385142,503,346 - 142,503,453UniSTSGRCm38
MGSCv375142,979,300 - 142,979,407UniSTSGRCm37
Celera5139,558,309 - 139,558,406UniSTS
Cytogenetic Map5G2UniSTS
cM Map582.0UniSTS
Whitehead Genetic575.4UniSTS
Whitehead/MRC_RH51703.45UniSTS
AI536456  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385142,484,990 - 142,485,120UniSTSGRCm38
MGSCv375142,960,944 - 142,961,074UniSTSGRCm37
Celera5139,539,669 - 139,539,799UniSTS
Cytogenetic Map5G2UniSTS
Whitehead/MRC_RH51701.74UniSTS
Papolb  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385142,529,263 - 142,529,583UniSTSGRCm38
MGSCv375143,005,217 - 143,005,537UniSTSGRCm37
Celera5139,584,289 - 139,584,609UniSTS
Cytogenetic Map5G2UniSTS
cM Map5 UniSTS
Radil  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map5G2UniSTS
cM Map581.53UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001289588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001310752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_178702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006504682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006504685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006504686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030254449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001784688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004942508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_377156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC158310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI536456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK038570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK052964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK079539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK173277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC056483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP764023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY201066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000063635   ⟹   ENSMUSP00000064539
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5142,470,594 - 142,536,853 (-)Ensembl
GRCm38.p6 Ensembl5142,484,839 - 142,551,098 (-)Ensembl
RefSeq Acc Id: ENSMUST00000085758   ⟹   ENSMUSP00000082910
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5142,470,597 - 142,530,783 (-)Ensembl
GRCm38.p6 Ensembl5142,484,842 - 142,545,028 (-)Ensembl
RefSeq Acc Id: ENSMUST00000110784   ⟹   ENSMUSP00000106411
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5142,470,622 - 142,495,414 (-)Ensembl
GRCm38.p6 Ensembl5142,484,867 - 142,509,659 (-)Ensembl
RefSeq Acc Id: ENSMUST00000110785   ⟹   ENSMUSP00000106412
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5142,470,634 - 142,536,832 (-)Ensembl
GRCm38.p6 Ensembl5142,484,879 - 142,551,077 (-)Ensembl
RefSeq Acc Id: ENSMUST00000129212   ⟹   ENSMUSP00000115800
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5142,529,373 - 142,536,720 (-)Ensembl
GRCm38.p6 Ensembl5142,543,618 - 142,550,965 (-)Ensembl
RefSeq Acc Id: ENSMUST00000139278   ⟹   ENSMUSP00000118477
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5142,493,875 - 142,495,249 (-)Ensembl
GRCm38.p6 Ensembl5142,508,120 - 142,509,494 (-)Ensembl
RefSeq Acc Id: ENSMUST00000139824
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5142,470,597 - 142,536,817 (-)Ensembl
GRCm38.p6 Ensembl5142,484,842 - 142,551,062 (-)Ensembl
RefSeq Acc Id: ENSMUST00000150380
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5142,472,238 - 142,473,324 (-)Ensembl
GRCm38.p6 Ensembl5142,486,483 - 142,487,569 (-)Ensembl
RefSeq Acc Id: NM_001289588   ⟹   NP_001276517
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395142,470,594 - 142,536,853 (-)NCBI
GRCm385142,484,839 - 142,551,098 (-)NCBI
Celera5139,539,518 - 139,606,103 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001310752   ⟹   NP_001297681
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395142,470,594 - 142,530,782 (-)NCBI
GRCm385142,484,839 - 142,545,027 (-)NCBI
Sequence:
RefSeq Acc Id: NM_178702   ⟹   NP_848817
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395142,470,594 - 142,536,853 (-)NCBI
GRCm385142,484,839 - 142,551,098 (-)NCBI
MGSCv375142,960,795 - 143,027,031 (-)RGD
Celera5139,539,518 - 139,606,103 (-)NCBI
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006504682   ⟹   XP_006504745
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395142,470,594 - 142,530,969 (-)NCBI
GRCm385142,483,795 - 142,545,226 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006504685   ⟹   XP_006504748
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395142,470,594 - 142,536,872 (-)NCBI
GRCm385142,483,795 - 142,550,981 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006504686   ⟹   XP_006504749
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395142,470,594 - 142,495,486 (-)NCBI
GRCm385142,483,795 - 142,509,731 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030254444   ⟹   XP_030110304
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395142,470,594 - 142,495,344 (-)NCBI
GRCm385142,484,839 - 142,509,652 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030254445   ⟹   XP_030110305
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395142,470,594 - 142,495,892 (-)NCBI
GRCm385142,483,795 - 142,510,267 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030254446   ⟹   XP_030110306
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395142,470,594 - 142,495,745 (-)NCBI
GRCm385142,483,795 - 142,509,990 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030254447   ⟹   XP_030110307
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395142,470,594 - 142,495,478 (-)NCBI
GRCm385142,484,839 - 142,509,652 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030254449   ⟹   XP_030110309
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395142,470,594 - 142,495,927 (-)NCBI
GRCm385142,483,795 - 142,510,172 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001784688
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395142,470,594 - 142,530,977 (-)NCBI
GRCm385142,483,795 - 142,545,230 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004942508
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395142,470,594 - 142,536,873 (-)NCBI
Sequence:
RefSeq Acc Id: XR_377156
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395142,470,594 - 142,530,970 (-)NCBI
GRCm385142,483,795 - 142,545,226 (-)NCBI
Sequence:
RefSeq Acc Id: NP_848817   ⟸   NM_178702
- Peptide Label: isoform 2
- UniProtKB: Q69Z89 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006504748   ⟸   XM_006504685
- Peptide Label: isoform X2
- UniProtKB: D3YWJ9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006504745   ⟸   XM_006504682
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006504749   ⟸   XM_006504686
- Peptide Label: isoform X4
- UniProtKB: Q69Z89 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001276517   ⟸   NM_001289588
- Peptide Label: isoform 1
- UniProtKB: D3YWJ9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001297681   ⟸   NM_001310752
- Peptide Label: isoform 3
- UniProtKB: Q8C6X2 (UniProtKB/Swiss-Prot),   Q8C549 (UniProtKB/Swiss-Prot),   Q8BNL0 (UniProtKB/Swiss-Prot),   Q8CAL1 (UniProtKB/Swiss-Prot),   Q69Z89 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_030110305   ⟸   XM_030254445
- Peptide Label: isoform X3
RefSeq Acc Id: XP_030110309   ⟸   XM_030254449
- Peptide Label: isoform X5
RefSeq Acc Id: XP_030110306   ⟸   XM_030254446
- Peptide Label: isoform X3
RefSeq Acc Id: XP_030110307   ⟸   XM_030254447
- Peptide Label: isoform X4
RefSeq Acc Id: XP_030110304   ⟸   XM_030254444
- Peptide Label: isoform X3
RefSeq Acc Id: ENSMUSP00000082910   ⟸   ENSMUST00000085758
RefSeq Acc Id: ENSMUSP00000118477   ⟸   ENSMUST00000139278
RefSeq Acc Id: ENSMUSP00000106411   ⟸   ENSMUST00000110784
RefSeq Acc Id: ENSMUSP00000106412   ⟸   ENSMUST00000110785
RefSeq Acc Id: ENSMUSP00000115800   ⟸   ENSMUST00000129212
RefSeq Acc Id: ENSMUSP00000064539   ⟸   ENSMUST00000063635
Protein Domains
Dilute   FHA   PDZ   Ras-associating

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q69Z89-F1-model_v2 AlphaFold Q69Z89 1-1099 view protein structure

Promoters
RGD ID:6888628
Promoter ID:EPDNEW_M7765
Type:initiation region
Name:Radil_2
Description:Mus musculus Ras association and DIL domains , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M7767  EPDNEW_M7768  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm385142,509,659 - 142,509,719EPDNEW
RGD ID:6888632
Promoter ID:EPDNEW_M7767
Type:single initiation site
Name:Radil_3
Description:Mus musculus Ras association and DIL domains , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M7765  EPDNEW_M7768  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm385142,545,001 - 142,545,061EPDNEW
RGD ID:6888634
Promoter ID:EPDNEW_M7768
Type:initiation region
Name:Radil_1
Description:Mus musculus Ras association and DIL domains , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M7765  EPDNEW_M7767  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm385142,551,059 - 142,551,119EPDNEW
RGD ID:6838183
Promoter ID:MM_KWN:44690
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:OTTMUST00000064410
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365142,963,076 - 142,963,576 (-)MPROMDB
RGD ID:6838205
Promoter ID:MM_KWN:44691
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:OTTMUST00000064409,   UC009AIS.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365142,985,326 - 142,985,826 (-)MPROMDB
RGD ID:6838182
Promoter ID:MM_KWN:44693
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:OTTMUST00000064359
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365143,021,371 - 143,021,871 (-)MPROMDB
RGD ID:6838245
Promoter ID:MM_KWN:44694
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   ES_Cell,   Lung
Transcripts:ENSMUST00000110785,   ENSMUST00000110787,   ENSMUST00000116461,   OTTMUST00000064355,   OTTMUST00000064358,   OTTMUST00000064360,   OTTMUST00000064408,   UC009AIU.1,   UC009AIV.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365143,026,541 - 143,027,041 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2443088 AgrOrtholog
Ensembl Genes ENSMUSG00000029576 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000063635 ENTREZGENE
  ENSMUST00000063635.15 UniProtKB/Swiss-Prot
  ENSMUST00000085758 ENTREZGENE
  ENSMUST00000085758.10 UniProtKB/Swiss-Prot
  ENSMUST00000110784 ENTREZGENE
  ENSMUST00000110784.8 UniProtKB/Swiss-Prot
  ENSMUST00000110785 ENTREZGENE
  ENSMUST00000110785.2 UniProtKB/TrEMBL
  ENSMUST00000129212.2 UniProtKB/TrEMBL
  ENSMUST00000139278.2 UniProtKB/TrEMBL
  ENSMUST00000139824 ENTREZGENE
Gene3D-CATH 2.30.42.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.200.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro CBD_Rasip1/Radil UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Dilute_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FHA_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PDZ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PDZ_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RA_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SMAD_FHA_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ubiquitin-like_domsf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:231858 UniProtKB/Swiss-Prot
MGD MGI:2443088 ENTREZGENE
NCBI Gene 231858 ENTREZGENE
PANTHER DILUTE DOMAIN-CONTAINING PROTEIN YPR089W UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RAS-ASSOCIATING AND DILUTE DOMAIN-CONTAINING PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DIL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FHA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PDZ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PF00788 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Radil PhenoGen
PROSITE DILUTE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PDZ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PS50200 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART DIL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PDZ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00314 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF49879 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF50156 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF54236 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt D3YUE9_MOUSE UniProtKB/TrEMBL
  D3YWJ9 ENTREZGENE, UniProtKB/TrEMBL
  D3YYI1_MOUSE UniProtKB/TrEMBL
  Q69Z89 ENTREZGENE
  Q8BNL0 ENTREZGENE
  Q8C549 ENTREZGENE
  Q8C6X2 ENTREZGENE
  Q8CAL1 ENTREZGENE
  RADIL_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q8BNL0 UniProtKB/Swiss-Prot
  Q8C549 UniProtKB/Swiss-Prot
  Q8C6X2 UniProtKB/Swiss-Prot
  Q8CAL1 UniProtKB/Swiss-Prot