Taf10 (TATA-box binding protein associated factor 10) - Rat Genome Database

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Gene: Taf10 (TATA-box binding protein associated factor 10) Mus musculus
Analyze
Symbol: Taf10
Name: TATA-box binding protein associated factor 10
RGD ID: 1314219
MGI Page MGI
Description: Enables DNA binding activity and promoter-specific chromatin binding activity. Involved in several processes, including allantois development; chordate embryonic development; and protein-containing complex assembly. Acts upstream of or within several processes, including G1/S transition of mitotic cell cycle; apoptotic process; and hepatocyte differentiation. Located in male germ cell nucleus. Part of transcription preinitiation complex. Is active in nucleus. Is expressed in several structures, including alimentary system; blastocyst; embryo mesenchyme; nervous system; and sensory organ epithelium. Orthologous to human TAF10 (TATA-box binding protein associated factor 10).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 30kD; 30kDa; AU041226; mTAFII30; TAF(II)30; TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor; TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30 kDa; Taf2; Taf2h; TAFI; TAFII-30; TAFII30; TATA box binding protein (TBP)-associated factor, RNA polymerase II, H, 30 kDa; transcription initiation factor TFIID 30 kDa subunit; transcription initiation factor TFIID subunit 10
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm4799  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397105,392,101 - 105,393,550 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7105,388,600 - 105,393,568 (-)EnsemblGRCm39 Ensembl
GRCm387105,742,894 - 105,744,375 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7105,739,393 - 105,744,361 (-)EnsemblGRCm38mm10GRCm38
MGSCv377112,891,408 - 112,892,852 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367105,616,715 - 105,618,159 (-)NCBIMGSCv36mm8
Celera7106,014,194 - 106,015,638 (-)NCBICelera
Cytogenetic Map7E3NCBI
cM Map755.97NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
2. Structural bioinformatics of the general transcription factor TFIID. Malkowska M, etal., Biochimie. 2013 Apr;95(4):680-91. doi: 10.1016/j.biochi.2012.10.024. Epub 2012 Nov 9.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. MGD IEA MGD IEA
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. Mouse MP Annotation Import Pipeline RGD automated import pipeline
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. ATAC-king the complexity of SAGA during evolution. Spedale G, etal., Genes Dev. 2012 Mar 15;26(6):527-41. doi: 10.1101/gad.184705.111.
Additional References at PubMed
PMID:7744009   PMID:9674425   PMID:9880483   PMID:10349636   PMID:10373431   PMID:10469660   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11406595   PMID:11438666  
PMID:11564863   PMID:12477932   PMID:12665565   PMID:12773572   PMID:14580349   PMID:14610273   PMID:15489334   PMID:15782199   PMID:16039642   PMID:16141072   PMID:16141073   PMID:17694077  
PMID:18206972   PMID:18722179   PMID:18799693   PMID:19114550   PMID:19829382   PMID:20059953   PMID:20362541   PMID:21873635   PMID:22323595   PMID:22560297   PMID:22639370   PMID:25209997  
PMID:25870109   PMID:27026076   PMID:28893950   PMID:30196744   PMID:30457570   PMID:35361962   PMID:35450884  


Genomics

Comparative Map Data
Taf10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397105,392,101 - 105,393,550 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7105,388,600 - 105,393,568 (-)EnsemblGRCm39 Ensembl
GRCm387105,742,894 - 105,744,375 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7105,739,393 - 105,744,361 (-)EnsemblGRCm38mm10GRCm38
MGSCv377112,891,408 - 112,892,852 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367105,616,715 - 105,618,159 (-)NCBIMGSCv36mm8
Celera7106,014,194 - 106,015,638 (-)NCBICelera
Cytogenetic Map7E3NCBI
cM Map755.97NCBI
TAF10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38116,606,294 - 6,612,216 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl116,606,294 - 6,612,539 (-)EnsemblGRCh38hg38GRCh38
GRCh37116,627,524 - 6,633,447 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36116,588,649 - 6,590,021 (-)NCBINCBI36Build 36hg18NCBI36
Build 34116,588,648 - 6,590,021NCBI
Celera116,751,139 - 6,752,511 (-)NCBICelera
Cytogenetic Map11p15.4NCBI
HuRef116,290,980 - 6,292,407 (-)NCBIHuRef
CHM1_1116,630,949 - 6,632,376 (-)NCBICHM1_1
T2T-CHM13v2.0116,664,762 - 6,670,684 (-)NCBIT2T-CHM13v2.0
Taf10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81169,506,940 - 169,508,234 (-)NCBIGRCr8
mRatBN7.21160,095,108 - 160,096,401 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1160,095,108 - 160,096,376 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1168,117,675 - 168,118,943 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01175,303,674 - 175,304,942 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01168,205,430 - 168,206,698 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01170,585,160 - 170,586,428 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1170,585,167 - 170,586,603 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01177,591,012 - 177,592,301 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41163,487,518 - 163,488,786 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11163,583,074 - 163,584,248 (-)NCBI
Celera1158,027,205 - 158,028,473 (-)NCBICelera
Cytogenetic Map1q32NCBI
Taf10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541422,323,031 - 22,324,367 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541422,322,954 - 22,324,412 (-)NCBIChiLan1.0ChiLan1.0
TAF10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v299,048,032 - 9,049,404 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1119,011,851 - 9,013,226 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0116,742,862 - 6,744,260 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1116,421,205 - 6,427,243 (-)NCBIpanpan1.1PanPan1.1panPan2
TAF10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12129,917,941 - 29,919,347 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2129,917,947 - 29,919,330 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2129,619,759 - 29,621,186 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02130,744,078 - 30,745,505 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2130,744,108 - 30,745,491 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12130,064,852 - 30,066,279 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02130,230,519 - 30,231,946 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02130,425,838 - 30,427,265 (-)NCBIUU_Cfam_GSD_1.0
Taf10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494756,006,151 - 56,007,527 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936842667,936 - 669,441 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936842667,960 - 669,367 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TAF10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl93,144,277 - 3,145,720 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.193,144,262 - 3,145,702 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.293,801,493 - 3,803,485 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TAF10
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1158,213,261 - 58,214,658 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl158,213,310 - 58,214,581 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038156,038,602 - 156,040,459 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Taf10
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248178,103,065 - 8,104,420 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248178,103,065 - 8,104,435 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Taf10
42 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2215
Count of miRNA genes:776
Interacting mature miRNAs:1024
Transcripts:ENSMUST00000054556, ENSMUST00000131683, ENSMUST00000141116, ENSMUST00000146999
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357460Vtbt4_mvertebral trabecular bone trait 4 (mouse)Not determined7101693381135693530Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
27226781Tibl3_mtibia length 3, 5 week (mouse)774849748122199223Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
1301781Capsq3_mcapsaicin sensitivity related QTL 3 (mouse)Not determined787143137119485380Mouse
14746989Manh62_mmandible shape 62 (mouse)775742528109742528Mouse
11039524Tbbr3_mTrypanosoma brucei brucei response 3 (mouse)7100750722134750843Mouse
27226769Tibl12_mtibia length 12, 10 week (mouse)787249208126499172Mouse
10043926Bw1n_mbody weight 1 in NSY (mouse)Not determined745161966118693530Mouse
27226765Tibl18_mtibia length 18, 16 week (mouse)781849748126499172Mouse
27226763Feml20_mfemur length 20, 16 week (mouse)785049208124199223Mouse
4142500Morq1_mmodifier of Rs1 QTL 1 (mouse)Not determined80551681114551791Mouse
1301647Elpt_melevated leptin (mouse)Not determined786500186120500329Mouse
13208555Lgth10_mbody length 10 (mouse)751649748125599172Mouse
26884408Bzwq13_mbi-zygomatic width QTL 13, 16 week (mouse)761749748121399223Mouse
1301937Skull10_mskull morphology 10 (mouse)Not determined791482996125483156Mouse
1300528Ssial3_msusceptibility to sialadenitis 3 (mouse)Not determined793391848127392041Mouse
5491192Mobq1_mmultigenic obesity QTL 1 (mouse)Not determined7105250663139250811Mouse
1301566Adip3_madiposity 3 (mouse)Not determined775394215109394346Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730199425108999207Mouse
26884398Humsd6_mhumerus midshaft diameter 6, 16 week (mouse)778649748136901729Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
27226790Feml15_mfemur length 15, 10 week (mouse)787249208126499172Mouse
13524852Asrq7a_macoustic startle response 7a (mouse)7105350008139350008Mouse
13524850Asrq7_macoustic startle response 7 (mouse)798394974132394974Mouse
1302062Stheal6_msoft tissue heal 6 (mouse)Not determined787043932121044066Mouse
26884440Sklq4_mskull length QTL 4, 5 week (mouse)765249748126499172Mouse
27095903Scvln10_msacral vertebrae length 2, 10 week (mouse)781449748126499172Mouse
27226715Metcl3_mmetatarsal-calcaneal length 3, 5 week (mouse)767849748119499223Mouse
26884444Sklq8_mskull length QTL 8, 10 week (mouse)767849748124199223Mouse
25823170Hrsq7_mhost response to SARS QTL 7, log titer (mouse)754819589116822815Mouse
1301082Bbaa16_mB.burgdorferi-associated arthritis 16 (mouse)Not determined736280015116416877Mouse
10412110Cctq1_mcentral corneal thickness QTL 1 (mouse)Not determined780551681114551791Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
1301447Fembm3_mfemoral bone morphometry 3 (mouse)Not determined7100993261134993342Mouse
10412104Tons2_mtongue size 2 (mouse)Not determined799837716133837716Mouse
1301188Heal6_mwound healing/regeneration 6 (mouse)Not determined787043932121044066Mouse
4142312Nilac4_mnicotine induced locomotor activity 4 (mouse)Not determined7102485219136485380Mouse
26884418Bzwq7_mbi-zygomatic width QTL 7, 10 week (mouse)767849748105449207Mouse
10043973Obq29_mobesity QTL 29 (mouse)Not determined772263372106263372Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753249748143153737Mouse
27095933Ulnl3_mulna length 3, 5 week (mouse)773149748143153737Mouse
1301105Cfld4_mcystic fibrosis lung disease 4 (mouse)Not determined7101693381135693530Mouse
1300721Cfbw3_mcystic fibrosis body weight 3 (mouse)Not determined7101693381135693530Mouse
27095929Pglq8_mpelvic girdle length QTL 8, 10 week (mouse)787849208108099207Mouse
27226745Metcl9_mmetatarsal-calcaneal length 9, 10 week (mouse)774849748122199223Mouse
27095930Ulnl10_mulna length 10, 16 week (mouse)780849748126699172Mouse
27095923Pglq3_mpelvic girdle length QTL 3, 5 week (mouse)781249748124199223Mouse
27095916Scvln15_msacral vertebrae length 2, 16 week (mouse)761749748123699223Mouse
13464255Ifvrq2_minfluenza virus resistance QTL 2 (mouse)792500698106455693Mouse
1357664Nba3_mNew Zealand Black autoimmunity 3 (mouse)Not determined791482996125483156Mouse
1301478Eae26_msusceptibility to experimental allergic encephalomyelitis 26 (mouse)Not determined798164922132165010Mouse
26884451Sklq14_mskull length QTL 14, 16 week (mouse)767849748124999172Mouse
27095910Pglq13_mpelvic girdle length QTL 13, 16 week (mouse)773049748125699172Mouse
13463473Hbbcq4_mhemoglobin concentration QTL 4 (mouse)787043932121044066Mouse
11553869Stmm2b_mskin tumor modifier of MSM 2a (mouse)773725965107725965Mouse
27095907Scvln4_msacral vertebrae length 2, 5 week (mouse)769949748120499223Mouse
1301997Cia7_mcollagen induced arthritis QTL 7 (mouse)Not determined785365595112533819Mouse

Markers in Region
AU041226  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381082,954,803 - 82,954,923UniSTSGRCm38
MGSCv371082,417,548 - 82,417,668UniSTSGRCm37
Celera1084,942,410 - 84,942,530UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map7F1UniSTS
Whitehead/MRC_RH10929.89UniSTS
Ilk  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381374,018,593 - 74,019,564UniSTSGRCm38
GRCm387105,741,191 - 105,742,861UniSTSGRCm38
MGSCv371374,156,041 - 74,157,012UniSTSGRCm37
MGSCv377112,889,705 - 112,891,375UniSTSGRCm37
Celera7106,012,491 - 106,014,161UniSTS
Celera1376,348,379 - 76,349,350UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map7E1UniSTS
AA511515  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381374,018,933 - 74,019,171UniSTSGRCm38
GRCm387105,741,998 - 105,742,346UniSTSGRCm38
MGSCv377112,890,512 - 112,890,860UniSTSGRCm37
MGSCv371374,156,381 - 74,156,619UniSTSGRCm37
Celera1376,348,719 - 76,348,957UniSTS
Celera7106,013,298 - 106,013,646UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map7E1UniSTS
cM Map7 UniSTS
cM MapUN UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000054556
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7105,392,433 - 105,393,549 (-)Ensembl
GRCm38.p6 Ensembl7105,743,226 - 105,744,342 (-)Ensembl
Ensembl Acc Id: ENSMUST00000131683
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7105,392,103 - 105,393,289 (-)Ensembl
GRCm38.p6 Ensembl7105,742,896 - 105,744,082 (-)Ensembl
Ensembl Acc Id: ENSMUST00000141116   ⟹   ENSMUSP00000118105
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7105,388,600 - 105,393,568 (-)Ensembl
GRCm38.p6 Ensembl7105,739,393 - 105,744,361 (-)Ensembl
Ensembl Acc Id: ENSMUST00000146999
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl7105,392,113 - 105,392,817 (-)Ensembl
GRCm38.p6 Ensembl7105,742,906 - 105,743,610 (-)Ensembl
RefSeq Acc Id: NM_001418334   ⟹   NP_001405263
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397105,392,101 - 105,393,550 (-)NCBI
RefSeq Acc Id: NM_020024   ⟹   NP_064408
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm397105,392,101 - 105,393,550 (-)NCBI
GRCm387105,742,894 - 105,744,338 (-)NCBI
MGSCv377112,891,408 - 112,892,852 (-)RGD
Celera7106,014,194 - 106,015,638 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_064408   ⟸   NM_020024
- Peptide Label: isoform 1
- UniProtKB: Q8C8H2 (UniProtKB/Swiss-Prot),   Q9QYY5 (UniProtKB/Swiss-Prot),   Q8K0H5 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000118105   ⟸   ENSMUST00000141116
RefSeq Acc Id: NP_001405263   ⟸   NM_001418334
- Peptide Label: isoform 2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8K0H5-F1-model_v2 AlphaFold Q8K0H5 1-218 view protein structure

Promoters
RGD ID:8665135
Promoter ID:EPDNEW_M10599
Type:initiation region
Name:Taf10_1
Description:Mus musculus TATA-box binding protein associated factor 10 ,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm387105,744,343 - 105,744,403EPDNEW
RGD ID:6842157
Promoter ID:MM_KWN:52107
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:OTTMUST00000062984,   OTTMUST00000062985,   OTTMUST00000062986,   OTTMUST00000062987
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv367112,891,961 - 112,893,062 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1346320 AgrOrtholog
Ensembl Genes ENSMUSG00000043866 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000141116 ENTREZGENE
  ENSMUST00000141116.2 UniProtKB/Swiss-Prot
InterPro TFIID_30kDa UniProtKB/Swiss-Prot
KEGG Report mmu:24075 UniProtKB/Swiss-Prot
MGD MGI:1346320 ENTREZGENE
NCBI Gene 24075 ENTREZGENE
PANTHER PTHR21242 UniProtKB/Swiss-Prot
  TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 10 UniProtKB/Swiss-Prot
Pfam TFIID_30kDa UniProtKB/Swiss-Prot
PhenoGen Taf10 PhenoGen
PIRSF TFIID_TAF10 UniProtKB/Swiss-Prot
PRINTS TFIID30KDSUB UniProtKB/Swiss-Prot
UniProt Q8C8H2 ENTREZGENE
  Q8K0H5 ENTREZGENE
  Q9QYY5 ENTREZGENE
  TAF10_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q8C8H2 UniProtKB/Swiss-Prot
  Q9QYY5 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-17 Taf10  TATA-box binding protein associated factor 10    TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor  Symbol and/or name change 5135510 APPROVED