PXN (paxillin) - Rat Genome Database

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Gene: PXN (paxillin) Homo sapiens
Analyze
Symbol: PXN
Name: paxillin
RGD ID: 1313984
HGNC Page HGNC
Description: Enables several functions, including beta-catenin binding activity; neuropilin binding activity; and vinculin binding activity. Involved in several processes, including endothelial cell migration; enzyme-linked receptor protein signaling pathway; and positive regulation of stress fiber assembly. Located in several cellular components, including focal adhesion; lamellipodium; and stress fiber.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: FLJ16691; testicular tissue protein Li 134
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812120,210,447 - 120,265,730 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl12120,210,439 - 120,265,771 (-)EnsemblGRCh38hg38GRCh38
GRCh3712120,648,250 - 120,703,533 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3612119,132,640 - 119,187,892 (-)NCBINCBI36hg18NCBI36
Build 3412119,110,976 - 119,166,229NCBI
Celera12120,281,352 - 120,336,672 (-)NCBI
Cytogenetic Map12q24.23NCBI
HuRef12117,656,442 - 117,711,723 (-)NCBIHuRef
CHM1_112120,616,253 - 120,671,571 (-)NCBICHM1_1
T2T-CHM13v2.012120,197,626 - 120,252,894 (-)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(R)-mevalonic acid  (ISO)
1,2-dimethylhydrazine  (ISO)
1,8-cineole  (ISO)
17beta-estradiol  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxycoumarin  (ISO)
4-hydroxyphenyl retinamide  (ISO)
4-vinylcyclohexene dioxide  (ISO)
acetylsalicylic acid  (EXP)
acrolein  (EXP)
aldehydo-D-glucose  (ISO)
all-trans-retinoic acid  (EXP)
alpha-pinene  (EXP)
Anetholtrithion  (EXP)
aristolochic acid  (EXP)
arsenite(3-)  (ISO)
atropine  (EXP)
benzo[a]pyrene  (EXP)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
BQ 123  (EXP)
cadmium atom  (EXP)
cadmium dichloride  (EXP)
calciol  (EXP)
carbamazepine  (EXP)
chlorpyrifos  (ISO)
cisplatin  (ISO)
cobalt dichloride  (EXP)
cyclosporin A  (EXP)
D-glucose  (ISO)
dibutyl phthalate  (ISO)
dicrotophos  (EXP)
dieldrin  (EXP)
diethyl maleate  (EXP)
disodium selenite  (EXP)
dorsomorphin  (EXP)
endosulfan  (EXP,ISO)
enzyme inhibitor  (EXP)
ethanol  (ISO)
formaldehyde  (EXP)
fulvestrant  (EXP)
genistein  (EXP)
glucose  (ISO)
heparin  (ISO)
hydrogen peroxide  (ISO)
ibuprofen  (ISO)
isoflavones  (EXP)
ivermectin  (EXP)
lithium chloride  (EXP)
lithocholic acid  (EXP)
methamphetamine  (ISO)
methotrexate  (EXP)
methoxychlor  (ISO)
microcystin-LR  (EXP)
oxotremorine M  (EXP)
ozone  (EXP)
paracetamol  (EXP,ISO)
pentanal  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (EXP,ISO)
phenylarsine oxide  (EXP)
phenylmercury acetate  (EXP)
reactive oxygen species  (EXP)
resveratrol  (ISO)
SB 431542  (EXP)
silicon dioxide  (EXP)
simvastatin  (ISO)
sodium arsenite  (ISO)
Soman  (ISO)
terbinafine  (EXP)
toxaphene  (EXP)
troglitazone  (ISO)
tropan-3alpha-yl 3-hydroxy-2-phenylpropanoate  (EXP)
tungsten  (ISO)
valproic acid  (EXP)
vinclozolin  (ISO)
vorinostat  (EXP)
wortmannin  (EXP)
xanthohumol  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
anchoring junction  (IEA)
cell cortex  (IEA)
cell leading edge  (ISO)
cell-cell junction  (IMP)
cytoplasm  (IEA)
cytoskeleton  (IEA)
cytosol  (IBA,IDA,TAS)
focal adhesion  (HDA,IBA,IDA,IEA,IMP,ISO)
lamellipodium  (IDA)
microtubule associated complex  (TAS)
plasma membrane  (IBA,IDA,ISS,TAS)
stress fiber  (IDA)

References

Additional References at PubMed
PMID:7493940   PMID:7525621   PMID:7529872   PMID:7534286   PMID:7561682   PMID:7657702   PMID:8609175   PMID:8641358   PMID:8810278   PMID:8922390   PMID:8978305   PMID:8986614  
PMID:9054445   PMID:9099734   PMID:9114003   PMID:9230116   PMID:9422762   PMID:9442086   PMID:9488700   PMID:9497381   PMID:9590268   PMID:9603926   PMID:9621077   PMID:9658172  
PMID:9756887   PMID:9759889   PMID:9785458   PMID:10080957   PMID:10082579   PMID:10085298   PMID:10092539   PMID:10330411   PMID:10400685   PMID:10417825   PMID:10455189   PMID:10604475  
PMID:10625692   PMID:10655584   PMID:10675325   PMID:10749932   PMID:10753828   PMID:10804218   PMID:10814581   PMID:10840040   PMID:10896954   PMID:10925297   PMID:10938112   PMID:10980697  
PMID:11035932   PMID:11036077   PMID:11096073   PMID:11113628   PMID:11134073   PMID:11181995   PMID:11251077   PMID:11278335   PMID:11304546   PMID:11337490   PMID:11463817   PMID:11477105  
PMID:11514617   PMID:11533025   PMID:11577104   PMID:11598204   PMID:11683411   PMID:11694518   PMID:11695992   PMID:11704675   PMID:11759057   PMID:11774284   PMID:11779709   PMID:11784715  
PMID:11805099   PMID:11820787   PMID:11825902   PMID:11857088   PMID:11919182   PMID:11928806   PMID:11950600   PMID:12006652   PMID:12033289   PMID:12118253   PMID:12149250   PMID:12153727  
PMID:12198159   PMID:12234367   PMID:12477932   PMID:12611588   PMID:12629171   PMID:12639940   PMID:12686598   PMID:12794117   PMID:12837751   PMID:12853963   PMID:12861019   PMID:12941817  
PMID:14523024   PMID:14585963   PMID:14627618   PMID:14636584   PMID:14665621   PMID:14688263   PMID:14699151   PMID:14702039   PMID:14718530   PMID:14970194   PMID:15023529   PMID:15107421  
PMID:15155793   PMID:15175910   PMID:15191880   PMID:15242880   PMID:15252114   PMID:15572663   PMID:15574420   PMID:15592455   PMID:15632162   PMID:15652337   PMID:15652490   PMID:15700267  
PMID:15719014   PMID:15770719   PMID:15793570   PMID:15817476   PMID:15870699   PMID:15951569   PMID:15987550   PMID:16040804   PMID:16094384   PMID:16105984   PMID:16212419   PMID:16212439  
PMID:16332543   PMID:16341674   PMID:16344560   PMID:16365170   PMID:16478788   PMID:16537926   PMID:16541075   PMID:16552730   PMID:16600665   PMID:16628223   PMID:16636290   PMID:16936772  
PMID:16964243   PMID:17081983   PMID:17082770   PMID:17187346   PMID:17233630   PMID:17298394   PMID:17449030   PMID:17462669   PMID:17467235   PMID:17513457   PMID:17574549   PMID:17868650  
PMID:17898078   PMID:18045996   PMID:18078823   PMID:18172305   PMID:18327407   PMID:18380937   PMID:18449907   PMID:18508764   PMID:18632638   PMID:18664639   PMID:18676874   PMID:18713649  
PMID:18813807   PMID:18818208   PMID:18940607   PMID:18986306   PMID:19082453   PMID:19151925   PMID:19167335   PMID:19353596   PMID:19358827   PMID:19401330   PMID:19481075   PMID:19492042  
PMID:19615356   PMID:19642098   PMID:19738201   PMID:19817696   PMID:19917054   PMID:20086044   PMID:20097761   PMID:20127017   PMID:20133777   PMID:20136697   PMID:20210243   PMID:20369478  
PMID:20395438   PMID:20489202   PMID:20525696   PMID:20628053   PMID:21034468   PMID:21042764   PMID:21043826   PMID:21084488   PMID:21148292   PMID:21173240   PMID:21270128   PMID:21270398  
PMID:21423176   PMID:21486952   PMID:21614903   PMID:21617717   PMID:21632544   PMID:21703394   PMID:21741599   PMID:21757638   PMID:21763488   PMID:21868260   PMID:21873635   PMID:21900245  
PMID:21940355   PMID:21988832   PMID:22017400   PMID:22075845   PMID:22094095   PMID:22095445   PMID:22194823   PMID:22203672   PMID:22270917   PMID:22293201   PMID:22362758   PMID:22481092  
PMID:22553211   PMID:22658674   PMID:22684108   PMID:22700880   PMID:22728435   PMID:22761432   PMID:22833565   PMID:22863883   PMID:22869380   PMID:22893698   PMID:22939629   PMID:22959909  
PMID:23076140   PMID:23119100   PMID:23128389   PMID:23209645   PMID:23209815   PMID:23275153   PMID:23317503   PMID:23389630   PMID:23393263   PMID:23397142   PMID:23414517   PMID:23574715  
PMID:23588386   PMID:23792636   PMID:23797058   PMID:24036928   PMID:24061591   PMID:24096476   PMID:24180516   PMID:24193434   PMID:24344012   PMID:24395444   PMID:24451945   PMID:24522185  
PMID:24639526   PMID:24671495   PMID:24694988   PMID:24706358   PMID:24863063   PMID:24885567   PMID:24894864   PMID:25015296   PMID:25070956   PMID:25182764   PMID:25190348   PMID:25231004  
PMID:25241761   PMID:25323586   PMID:25391654   PMID:25448629   PMID:25468996   PMID:25486458   PMID:25705373   PMID:25742295   PMID:25753039   PMID:25795725   PMID:25826088   PMID:25852190  
PMID:25873394   PMID:25973017   PMID:26159303   PMID:26186194   PMID:26344197   PMID:26349603   PMID:26464671   PMID:26496610   PMID:26530439   PMID:26598620   PMID:26673895   PMID:26895766  
PMID:26928467   PMID:26956728   PMID:26980710   PMID:26992741   PMID:27035282   PMID:27068537   PMID:27068854   PMID:27095481   PMID:27130522   PMID:27173435   PMID:27521426   PMID:27637748  
PMID:27684187   PMID:27708212   PMID:27880917   PMID:28100775   PMID:28214467   PMID:28314297   PMID:28415719   PMID:28514442   PMID:28553938   PMID:28656206   PMID:28675297   PMID:28718761  
PMID:28739717   PMID:28759036   PMID:28954813   PMID:29021139   PMID:29040002   PMID:29242050   PMID:29318915   PMID:29337100   PMID:29494963   PMID:29509190   PMID:30016365   PMID:30120307  
PMID:31527615   PMID:31540324   PMID:31670855   PMID:31980649   PMID:32296183   PMID:32705241   PMID:32859368   PMID:33149280   PMID:33154189   PMID:33243234   PMID:33422779   PMID:33609338  
PMID:33961781   PMID:34079125   PMID:34135128   PMID:34424263   PMID:34475475   PMID:34946859   PMID:35271311  


Genomics

Comparative Map Data
PXN
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812120,210,447 - 120,265,730 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl12120,210,439 - 120,265,771 (-)EnsemblGRCh38hg38GRCh38
GRCh3712120,648,250 - 120,703,533 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3612119,132,640 - 119,187,892 (-)NCBINCBI36hg18NCBI36
Build 3412119,110,976 - 119,166,229NCBI
Celera12120,281,352 - 120,336,672 (-)NCBI
Cytogenetic Map12q24.23NCBI
HuRef12117,656,442 - 117,711,723 (-)NCBIHuRef
CHM1_112120,616,253 - 120,671,571 (-)NCBICHM1_1
T2T-CHM13v2.012120,197,626 - 120,252,894 (-)NCBI
Pxn
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395115,630,153 - 115,694,046 (+)NCBIGRCm39mm39
GRCm39 Ensembl5115,644,735 - 115,694,046 (+)Ensembl
GRCm385115,491,970 - 115,555,987 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5115,506,676 - 115,555,987 (+)EnsemblGRCm38mm10GRCm38
MGSCv375115,956,711 - 116,005,995 (+)NCBIGRCm37mm9NCBIm37
MGSCv365115,767,751 - 115,815,656 (+)NCBImm8
Celera5112,606,134 - 112,661,101 (+)NCBICelera
Cytogenetic Map5FNCBI
cM Map556.1NCBI
Pxn
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21241,060,791 - 41,107,962 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1241,060,791 - 41,107,931 (-)Ensembl
Rnor_6.01246,797,953 - 46,845,107 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1246,797,954 - 46,845,080 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01248,595,399 - 48,642,177 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41242,322,193 - 42,370,507 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11242,185,581 - 42,233,895 (-)NCBI
Celera1242,684,240 - 42,731,375 (-)NCBICelera
Cytogenetic Map12q16NCBI
Pxn
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545511,388,378 - 11,403,082 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545511,387,140 - 11,401,178 (+)NCBIChiLan1.0ChiLan1.0
PXN
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.112121,160,295 - 121,200,695 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12121,160,295 - 121,176,667 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v012117,785,614 - 117,840,816 (-)NCBIMhudiblu_PPA_v0panPan3
PXN
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12616,157,231 - 16,224,028 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2616,159,025 - 16,184,820 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2616,161,797 - 16,210,046 (-)NCBI
ROS_Cfam_1.02616,424,969 - 16,473,447 (-)NCBI
ROS_Cfam_1.0 Ensembl2616,424,971 - 16,473,427 (-)Ensembl
UMICH_Zoey_3.12616,385,989 - 16,434,224 (-)NCBI
UNSW_CanFamBas_1.02616,463,118 - 16,511,352 (-)NCBI
UU_Cfam_GSD_1.02616,504,096 - 16,552,543 (-)NCBI
Pxn
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118146,161,497 - 146,210,393 (+)NCBI
SpeTri2.0NW_004936668660,415 - 709,282 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PXN
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1440,227,894 - 40,278,766 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11440,227,894 - 40,278,785 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
PXN
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.111115,560,859 - 115,619,093 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl11115,560,662 - 115,619,029 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666037129,487,668 - 129,546,391 (+)NCBIVero_WHO_p1.0
Pxn
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474713,370,243 - 13,435,714 (+)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_00462474713,371,128 - 13,435,619 (+)NCBIHetGla_female_1.0hetGla2

Position Markers
D12S1721  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3712120,686,167 - 120,686,453UniSTSGRCh37
Build 3612119,170,550 - 119,170,836RGDNCBI36
Celera12120,319,267 - 120,319,561RGD
Cytogenetic Map12q24.31UniSTS
HuRef12117,694,405 - 117,694,691UniSTS
Marshfield Genetic Map12136.82RGD
Marshfield Genetic Map12136.82UniSTS
Genethon Genetic Map12137.5UniSTS
deCODE Assembly Map12140.17UniSTS
Whitehead-YAC Contig Map12 UniSTS
RH36430  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3712120,650,339 - 120,650,532UniSTSGRCh37
Build 3612119,134,722 - 119,134,915RGDNCBI36
Celera12120,283,441 - 120,283,634RGD
Cytogenetic Map12q24.31UniSTS
HuRef12117,658,539 - 117,658,732UniSTS
G64568  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3712120,667,554 - 120,667,766UniSTSGRCh37
Build 3612119,151,937 - 119,152,149RGDNCBI36
Celera12120,300,656 - 120,300,868RGD
Cytogenetic Map12q24.31UniSTS
HuRef12117,675,754 - 117,675,966UniSTS
RH78308  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3712120,648,279 - 120,648,399UniSTSGRCh37
Build 3612119,132,662 - 119,132,782RGDNCBI36
Celera12120,281,381 - 120,281,501RGD
Cytogenetic Map12q24.31UniSTS
HuRef12117,656,479 - 117,656,599UniSTS
GeneMap99-GB4 RH Map12465.51UniSTS
STS-AA002185  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3712120,650,311 - 120,650,531UniSTSGRCh37
Build 3612119,134,694 - 119,134,914RGDNCBI36
Celera12120,283,413 - 120,283,633RGD
Cytogenetic Map12q24.31UniSTS
HuRef12117,658,511 - 117,658,731UniSTS
GeneMap99-GB4 RH Map12464.49UniSTS
NCBI RH Map12751.0UniSTS
A001T32  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3712120,648,313 - 120,648,436UniSTSGRCh37
Build 3612119,132,696 - 119,132,819RGDNCBI36
Celera12120,281,415 - 120,281,538RGD
Cytogenetic Map12q24.31UniSTS
HuRef12117,656,513 - 117,656,636UniSTS
GeneMap99-GB4 RH Map12464.39UniSTS
D15S1477  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map4q32-q35UniSTS
Cytogenetic Map5q11UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map10p12.1-p11.2UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map5q14UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map7p21.3UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map14q31-q32UniSTS
Cytogenetic Map10q25.2UniSTS
Cytogenetic Map16p13.13-p13.12UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map13q13.1UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map10q24.2UniSTS
Cytogenetic Map1q42.11UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map2q14UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map11q14.2UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map5q23UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map13q12.1UniSTS
Cytogenetic Map6p21.32UniSTS
Cytogenetic Map2q31UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map3p21.2UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map22q12.3UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map19pUniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map8q11.21UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map10q23.2UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map1q31.3UniSTS
Cytogenetic Map4q35UniSTS
Cytogenetic Map9p13UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map6q25.2-q25.3UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map7q22.3UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map17q24UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map19q13.3-q13.4UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map20q13UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map17q22-q23UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map12q23.1UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map13q11UniSTS
Cytogenetic MapXp22.3UniSTS
Cytogenetic Map3p25-p24UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic MapXq22.1UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map3p12UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic MapXp11.2UniSTS
Cytogenetic Map11q13.1-q13.2UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map5p13.2UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map10q23.31UniSTS
Cytogenetic Map6p21.1-p12.2UniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map1p35UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map8q23.1UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map14q11.1UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map19p13.3-p13.2UniSTS
Cytogenetic Map1p36.11-p34.2UniSTS
Cytogenetic Map9p22UniSTS
Cytogenetic Map1q42.12UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map9p22.1UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map20p11.23UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map8q12.1UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic MapXp11.22UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map18q12.3UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map12q11-q12UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map2p24UniSTS
Cytogenetic Map8q24.21UniSTS
Cytogenetic Map12q22-q23.1UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map15q21-q22UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map16p13.13UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map10q24UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic Map7p14-p13UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map6q22-q23UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map4q21.22UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map16p12.1UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map11q13.1-q13.3UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map2q24UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map10q25UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map15q21-q23UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map11q12UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map5q35UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map3q25.31UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map10q24.31UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map18q21.3UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map11q23.2UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map4q28-q32UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map12q24.11UniSTS
Cytogenetic Map9q21.12UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map20p11.22-p11.1UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map9q31-q33UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map6q15UniSTS
Cytogenetic Map5q35.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q11.2-q13.2UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic MapXq13.3UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map5q35.1UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map4q21.21UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic MapXq21.1UniSTS
Cytogenetic Map10p11.21UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map8p11.2UniSTS
Cytogenetic Map7q22-q31UniSTS
Cytogenetic Map22q12UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map12q14UniSTS
Cytogenetic Map11q23.1-q23.2UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map17qUniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map3p25.2UniSTS
Cytogenetic Map5q21.3UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic Map6p24.2UniSTS
D11S2560  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map10p12.1-p11.2UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map8q21.13UniSTS
Cytogenetic Map18p11.22UniSTS
Cytogenetic Map9p13.3-p12UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map8p22-p21UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map10q24.2UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map9q22.33UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map12p13.33UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map5q23UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map3p21.2UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map6q27UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map2q12.1UniSTS
Cytogenetic Map9q13-q21UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map8q11.21UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map12q23-q24.1UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map10q23.2UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map1p32UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map3q26.2-q27UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic MapXp11.2UniSTS
Cytogenetic Map20q11.2UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map4p15.32UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map1p36.11-p34.2UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map18p11.32UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map14q13.2UniSTS
Cytogenetic Map8q12.1UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map14q31.1UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map18q12.3UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map8q24.21UniSTS
Cytogenetic Map12q22-q23.1UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map1q23UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map18q21UniSTS
Cytogenetic Map7p14-p13UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map19p13.3-p13.2UniSTS
Cytogenetic Map6q22-q23UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map11q13.1-q13.3UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map6p24UniSTS
Cytogenetic Map10q25UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map9q31.1UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map3p26.1-p25.1UniSTS
Cytogenetic Map6q16.3UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic MapXq27.1UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map3q25.31UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map9q33.2UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map14q32.32UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic Map6q14.1UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map1p35-p34UniSTS
Cytogenetic Map9q34.1UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map3p25.2UniSTS
Cytogenetic Map5q11UniSTS

miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
MIR218-2hsa-miR-218-5pOncomiRDBexternal_infoNANA21159652
MIR137hsa-miR-137Mirtarbaseexternal_infoLuciferase reporter assay//qRT-PCR//Western blotFunctional MTI23275153

Predicted Target Of
Summary Value
Count of predictions:11884
Count of miRNA genes:1135
Interacting mature miRNAs:1469
Transcripts:ENST00000228307, ENST00000267257, ENST00000323871, ENST00000397506, ENST00000424649, ENST00000440827, ENST00000458477, ENST00000536957, ENST00000538144, ENST00000540221, ENST00000543331, ENST00000546532, ENST00000547746, ENST00000547772, ENST00000547983, ENST00000548912, ENST00000550205, ENST00000550795, ENST00000551327, ENST00000552550
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 2431 2949 1492 395 1741 237 4352 2178 1938 411 1440 1602 171 1204 2785 3
Low 7 34 232 228 206 228 4 18 1771 8 13 10 2 3 2 1
Below cutoff 6 1 4 13 6 1 2 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_029820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001080855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001243756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001385981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001385982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001385983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001385984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001385985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001385986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001385987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001385988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001385989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001385990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_002859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_025157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005253917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006719532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006719534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006719535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006719536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011538622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011538623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019729 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019734 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019735 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019736 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019737 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019742 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024449107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024449108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024449109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024449110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429241 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002957365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA922640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB209034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC004263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH007142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK026695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK122964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK128712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK298057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK299486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK314204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC010498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC015217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC052611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC136787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC136794 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC144410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM742662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU500419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX648777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D86862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D86863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA105135 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA565031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB472926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM005447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U14588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000228307   ⟹   ENSP00000228307
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl12120,210,447 - 120,265,771 (-)Ensembl
RefSeq Acc Id: ENST00000267257   ⟹   ENSP00000267257
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl12120,210,439 - 120,265,771 (-)Ensembl
RefSeq Acc Id: ENST00000323871   ⟹   ENSP00000489977
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl12120,210,451 - 120,265,718 (-)Ensembl
RefSeq Acc Id: ENST00000424649   ⟹   ENSP00000391283
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl12120,210,447 - 120,265,771 (-)Ensembl
RefSeq Acc Id: ENST00000440827
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl12120,223,720 - 120,265,706 (-)Ensembl
RefSeq Acc Id: ENST00000458477   ⟹   ENSP00000395536
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl12120,210,447 - 120,250,161 (-)Ensembl
RefSeq Acc Id: ENST00000536957   ⟹   ENSP00000443887
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl12120,210,448 - 120,226,844 (-)Ensembl
RefSeq Acc Id: ENST00000538144
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl12120,212,314 - 120,224,377 (-)Ensembl
RefSeq Acc Id: ENST00000540221
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl12120,224,175 - 120,226,499 (-)Ensembl
RefSeq Acc Id: ENST00000543331   ⟹   ENSP00000443745
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl12120,222,717 - 120,226,795 (-)Ensembl
RefSeq Acc Id: ENST00000546532   ⟹   ENSP00000447180
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl12120,222,734 - 120,226,055 (-)Ensembl
RefSeq Acc Id: ENST00000547746
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl12120,224,154 - 120,265,692 (-)Ensembl
RefSeq Acc Id: ENST00000547772
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl12120,226,655 - 120,265,737 (-)Ensembl
RefSeq Acc Id: ENST00000547983   ⟹   ENSP00000446893
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl12120,221,643 - 120,265,737 (-)Ensembl
RefSeq Acc Id: ENST00000548912   ⟹   ENSP00000446607
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl12120,222,737 - 120,226,069 (-)Ensembl
RefSeq Acc Id: ENST00000550205
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl12120,226,606 - 120,248,750 (-)Ensembl
RefSeq Acc Id: ENST00000550795
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl12120,214,836 - 120,216,006 (-)Ensembl
RefSeq Acc Id: ENST00000551327
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl12120,222,676 - 120,248,748 (-)Ensembl
RefSeq Acc Id: ENST00000552550   ⟹   ENSP00000446650
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl12120,222,863 - 120,224,750 (-)Ensembl
RefSeq Acc Id: ENST00000637386   ⟹   ENSP00000490352
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl12120,215,241 - 120,222,589 (-)Ensembl
RefSeq Acc Id: ENST00000637617   ⟹   ENSP00000489840
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl12120,210,447 - 120,265,730 (-)Ensembl
RefSeq Acc Id: ENST00000637624   ⟹   ENSP00000490896
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl12120,210,448 - 120,219,378 (-)Ensembl
RefSeq Acc Id: NM_001080855   ⟹   NP_001074324
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,265,730 (-)NCBI
GRCh3712120,648,242 - 120,703,574 (-)NCBI
HuRef12117,656,442 - 117,711,723 (-)NCBI
CHM1_112120,616,253 - 120,671,571 (-)NCBI
T2T-CHM13v2.012120,197,626 - 120,252,894 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001243756   ⟹   NP_001230685
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,265,730 (-)NCBI
GRCh3712120,648,242 - 120,703,574 (-)NCBI
HuRef12117,656,442 - 117,711,723 (-)NCBI
CHM1_112120,616,253 - 120,671,571 (-)NCBI
T2T-CHM13v2.012120,197,626 - 120,252,894 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001385981   ⟹   NP_001372910
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,265,730 (-)NCBI
T2T-CHM13v2.012120,197,626 - 120,252,894 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001385982   ⟹   NP_001372911
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,265,730 (-)NCBI
T2T-CHM13v2.012120,197,626 - 120,252,894 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001385983   ⟹   NP_001372912
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,265,730 (-)NCBI
T2T-CHM13v2.012120,197,626 - 120,252,894 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001385984   ⟹   NP_001372913
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,265,730 (-)NCBI
T2T-CHM13v2.012120,197,626 - 120,252,894 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001385985   ⟹   NP_001372914
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,265,730 (-)NCBI
T2T-CHM13v2.012120,197,626 - 120,252,894 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001385986   ⟹   NP_001372915
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,265,730 (-)NCBI
T2T-CHM13v2.012120,197,626 - 120,252,894 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001385987   ⟹   NP_001372916
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,265,730 (-)NCBI
T2T-CHM13v2.012120,197,626 - 120,252,894 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001385988   ⟹   NP_001372917
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,265,730 (-)NCBI
T2T-CHM13v2.012120,197,626 - 120,252,894 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001385989   ⟹   NP_001372918
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,265,730 (-)NCBI
T2T-CHM13v2.012120,197,626 - 120,252,894 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001385990   ⟹   NP_001372919
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,265,730 (-)NCBI
T2T-CHM13v2.012120,197,626 - 120,252,894 (-)NCBI
Sequence:
RefSeq Acc Id: NM_002859   ⟹   NP_002850
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,265,730 (-)NCBI
GRCh3712120,648,242 - 120,703,574 (-)NCBI
Build 3612119,132,640 - 119,187,892 (-)NCBI Archive
HuRef12117,656,442 - 117,711,723 (-)NCBI
CHM1_112120,616,253 - 120,671,571 (-)NCBI
T2T-CHM13v2.012120,197,626 - 120,252,894 (-)NCBI
Sequence:
RefSeq Acc Id: NM_025157   ⟹   NP_079433
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,250,163 (-)NCBI
GRCh3712120,648,242 - 120,703,574 (-)NCBI
HuRef12117,656,442 - 117,711,723 (-)NCBI
CHM1_112120,616,253 - 120,655,973 (-)NCBI
T2T-CHM13v2.012120,197,626 - 120,237,325 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006719532   ⟹   XP_006719595
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,265,730 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011538622   ⟹   XP_011536924
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,265,730 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017019732   ⟹   XP_016875221
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,215,204 - 120,224,308 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017019739   ⟹   XP_016875228
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,227,117 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017019740   ⟹   XP_016875229
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,227,117 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017019742   ⟹   XP_016875231
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,227,117 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047429236   ⟹   XP_047285192
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,250,163 (-)NCBI
RefSeq Acc Id: XM_047429237   ⟹   XP_047285193
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,224,308 (-)NCBI
RefSeq Acc Id: XM_047429238   ⟹   XP_047285194
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,224,308 (-)NCBI
RefSeq Acc Id: XM_047429239   ⟹   XP_047285195
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,265,730 (-)NCBI
RefSeq Acc Id: XM_047429240   ⟹   XP_047285196
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,265,730 (-)NCBI
RefSeq Acc Id: XM_047429241   ⟹   XP_047285197
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,265,730 (-)NCBI
RefSeq Acc Id: XM_047429242   ⟹   XP_047285198
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,227,117 (-)NCBI
RefSeq Acc Id: XM_047429243   ⟹   XP_047285199
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,227,117 (-)NCBI
RefSeq Acc Id: XM_047429244   ⟹   XP_047285200
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,227,117 (-)NCBI
RefSeq Acc Id: XM_047429245   ⟹   XP_047285201
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,227,117 (-)NCBI
RefSeq Acc Id: XM_047429246   ⟹   XP_047285202
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,265,730 (-)NCBI
RefSeq Acc Id: XM_047429248   ⟹   XP_047285204
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,215,204 - 120,265,730 (-)NCBI
RefSeq Acc Id: XM_047429249   ⟹   XP_047285205
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,227,117 (-)NCBI
RefSeq Acc Id: XM_047429250   ⟹   XP_047285206
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,228,394 (-)NCBI
RefSeq Acc Id: XM_047429251   ⟹   XP_047285207
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,224,723 (-)NCBI
RefSeq Acc Id: XM_047429252   ⟹   XP_047285208
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,224,723 (-)NCBI
RefSeq Acc Id: XM_047429253   ⟹   XP_047285209
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,210,447 - 120,224,723 (-)NCBI
RefSeq Acc Id: XR_002957365
RefSeq Status:
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,214,889 - 120,224,308 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001074324 (Get FASTA)   NCBI Sequence Viewer  
  NP_001230685 (Get FASTA)   NCBI Sequence Viewer  
  NP_001372910 (Get FASTA)   NCBI Sequence Viewer  
  NP_001372911 (Get FASTA)   NCBI Sequence Viewer  
  NP_001372912 (Get FASTA)   NCBI Sequence Viewer  
  NP_001372913 (Get FASTA)   NCBI Sequence Viewer  
  NP_001372914 (Get FASTA)   NCBI Sequence Viewer  
  NP_001372915 (Get FASTA)   NCBI Sequence Viewer  
  NP_001372916 (Get FASTA)   NCBI Sequence Viewer  
  NP_001372917 (Get FASTA)   NCBI Sequence Viewer  
  NP_001372918 (Get FASTA)   NCBI Sequence Viewer  
  NP_001372919 (Get FASTA)   NCBI Sequence Viewer  
  NP_002850 (Get FASTA)   NCBI Sequence Viewer  
  NP_079433 (Get FASTA)   NCBI Sequence Viewer  
  XP_006719595 (Get FASTA)   NCBI Sequence Viewer  
  XP_011536924 (Get FASTA)   NCBI Sequence Viewer  
  XP_016875221 (Get FASTA)   NCBI Sequence Viewer  
  XP_016875228 (Get FASTA)   NCBI Sequence Viewer  
  XP_016875229 (Get FASTA)   NCBI Sequence Viewer  
  XP_016875231 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285192 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285193 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285194 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285195 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285196 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285197 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285198 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285199 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285200 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285201 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285202 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285204 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285205 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285206 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285207 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285208 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285209 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC05175 (Get FASTA)   NCBI Sequence Viewer  
  AAC50104 (Get FASTA)   NCBI Sequence Viewer  
  AAD00648 (Get FASTA)   NCBI Sequence Viewer  
  AAH03647 (Get FASTA)   NCBI Sequence Viewer  
  AAH52611 (Get FASTA)   NCBI Sequence Viewer  
  AAI36788 (Get FASTA)   NCBI Sequence Viewer  
  AAI36795 (Get FASTA)   NCBI Sequence Viewer  
  AAI44411 (Get FASTA)   NCBI Sequence Viewer  
  AEE61045 (Get FASTA)   NCBI Sequence Viewer  
  BAA18997 (Get FASTA)   NCBI Sequence Viewer  
  BAA18998 (Get FASTA)   NCBI Sequence Viewer  
  BAB15529 (Get FASTA)   NCBI Sequence Viewer  
  BAC87586 (Get FASTA)   NCBI Sequence Viewer  
  BAD92271 (Get FASTA)   NCBI Sequence Viewer  
  BAG36880 (Get FASTA)   NCBI Sequence Viewer  
  BAG53822 (Get FASTA)   NCBI Sequence Viewer  
  BAG60351 (Get FASTA)   NCBI Sequence Viewer  
  BAG61448 (Get FASTA)   NCBI Sequence Viewer  
  CAI46024 (Get FASTA)   NCBI Sequence Viewer  
  EAW98175 (Get FASTA)   NCBI Sequence Viewer  
  EAW98176 (Get FASTA)   NCBI Sequence Viewer  
  EAW98177 (Get FASTA)   NCBI Sequence Viewer  
  EAW98178 (Get FASTA)   NCBI Sequence Viewer  
  EAW98179 (Get FASTA)   NCBI Sequence Viewer  
  P49023 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_002850   ⟸   NM_002859
- Peptide Label: isoform 1
- UniProtKB: P49023 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001074324   ⟸   NM_001080855
- Peptide Label: isoform 2
- UniProtKB: P49023 (UniProtKB/Swiss-Prot),   A0A140VJQ8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_079433   ⟸   NM_025157
- Peptide Label: isoform 4
- UniProtKB: P49023 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001230685   ⟸   NM_001243756
- Peptide Label: isoform 3
- UniProtKB: P49023 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006719595   ⟸   XM_006719532
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_011536924   ⟸   XM_011538622
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_016875231   ⟸   XM_017019742
- Peptide Label: isoform X18
- Sequence:
RefSeq Acc Id: XP_016875228   ⟸   XM_017019739
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_016875229   ⟸   XM_017019740
- Peptide Label: isoform X13
- Sequence:
RefSeq Acc Id: XP_016875221   ⟸   XM_017019732
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: ENSP00000228307   ⟸   ENST00000228307
RefSeq Acc Id: ENSP00000391283   ⟸   ENST00000424649
RefSeq Acc Id: ENSP00000267257   ⟸   ENST00000267257
RefSeq Acc Id: ENSP00000443745   ⟸   ENST00000543331
RefSeq Acc Id: ENSP00000490352   ⟸   ENST00000637386
RefSeq Acc Id: ENSP00000490896   ⟸   ENST00000637624
RefSeq Acc Id: ENSP00000489840   ⟸   ENST00000637617
RefSeq Acc Id: ENSP00000447180   ⟸   ENST00000546532
RefSeq Acc Id: ENSP00000446893   ⟸   ENST00000547983
RefSeq Acc Id: ENSP00000446607   ⟸   ENST00000548912
RefSeq Acc Id: ENSP00000489977   ⟸   ENST00000323871
RefSeq Acc Id: ENSP00000443887   ⟸   ENST00000536957
RefSeq Acc Id: ENSP00000395536   ⟸   ENST00000458477
RefSeq Acc Id: ENSP00000446650   ⟸   ENST00000552550
RefSeq Acc Id: NP_001372919   ⟸   NM_001385990
- Peptide Label: isoform 14
RefSeq Acc Id: NP_001372918   ⟸   NM_001385989
- Peptide Label: isoform 13
RefSeq Acc Id: NP_001372917   ⟸   NM_001385988
- Peptide Label: isoform 12
RefSeq Acc Id: NP_001372915   ⟸   NM_001385986
- Peptide Label: isoform 10
RefSeq Acc Id: NP_001372916   ⟸   NM_001385987
- Peptide Label: isoform 11
RefSeq Acc Id: NP_001372914   ⟸   NM_001385985
- Peptide Label: isoform 9
RefSeq Acc Id: NP_001372913   ⟸   NM_001385984
- Peptide Label: isoform 8
RefSeq Acc Id: NP_001372912   ⟸   NM_001385983
- Peptide Label: isoform 7
RefSeq Acc Id: NP_001372911   ⟸   NM_001385982
- Peptide Label: isoform 6
RefSeq Acc Id: NP_001372910   ⟸   NM_001385981
- Peptide Label: isoform 5
RefSeq Acc Id: XP_047285202   ⟸   XM_047429246
- Peptide Label: isoform X16
RefSeq Acc Id: XP_047285197   ⟸   XM_047429241
- Peptide Label: isoform X9
RefSeq Acc Id: XP_047285196   ⟸   XM_047429240
- Peptide Label: isoform X8
RefSeq Acc Id: XP_047285195   ⟸   XM_047429239
- Peptide Label: isoform X7
RefSeq Acc Id: XP_047285192   ⟸   XM_047429236
- Peptide Label: isoform X1
RefSeq Acc Id: XP_047285206   ⟸   XM_047429250
- Peptide Label: isoform X20
RefSeq Acc Id: XP_047285199   ⟸   XM_047429243
- Peptide Label: isoform X12
RefSeq Acc Id: XP_047285201   ⟸   XM_047429245
- Peptide Label: isoform X15
RefSeq Acc Id: XP_047285205   ⟸   XM_047429249
- Peptide Label: isoform X19
RefSeq Acc Id: XP_047285198   ⟸   XM_047429242
- Peptide Label: isoform X11
RefSeq Acc Id: XP_047285200   ⟸   XM_047429244
- Peptide Label: isoform X14
RefSeq Acc Id: XP_047285208   ⟸   XM_047429252
- Peptide Label: isoform X22
RefSeq Acc Id: XP_047285209   ⟸   XM_047429253
- Peptide Label: isoform X23
RefSeq Acc Id: XP_047285207   ⟸   XM_047429251
- Peptide Label: isoform X21
RefSeq Acc Id: XP_047285194   ⟸   XM_047429238
- Peptide Label: isoform X6
RefSeq Acc Id: XP_047285193   ⟸   XM_047429237
- Peptide Label: isoform X5
RefSeq Acc Id: XP_047285204   ⟸   XM_047429248
- Peptide Label: isoform X17
Protein Domains
LIM zinc-binding

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P49023-F1-model_v2 AlphaFold P49023 1-591 view protein structure

Promoters
RGD ID:6789911
Promoter ID:HG_KWN:16813
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3,   K562,   NB4
Transcripts:ENST00000397506,   UC001TXU.2
Position:
Human AssemblyChrPosition (strand)Source
Build 3612119,138,271 - 119,139,462 (-)MPROMDB
RGD ID:6790413
Promoter ID:HG_KWN:16814
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3,   K562
Transcripts:UC001TYA.1
Position:
Human AssemblyChrPosition (strand)Source
Build 3612119,141,311 - 119,143,112 (-)MPROMDB
RGD ID:6790411
Promoter ID:HG_KWN:16815
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3,   Lymphoblastoid
Transcripts:ENST00000323871,   UC001TXV.2
Position:
Human AssemblyChrPosition (strand)Source
Build 3612119,146,599 - 119,147,099 (-)MPROMDB
RGD ID:6790409
Promoter ID:HG_KWN:16817
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:NM_025157
Position:
Human AssemblyChrPosition (strand)Source
Build 3612119,172,509 - 119,173,009 (-)MPROMDB
RGD ID:6790408
Promoter ID:HG_KWN:16818
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000267257,   NM_001080855,   NM_002859,   UC001TXZ.2
Position:
Human AssemblyChrPosition (strand)Source
Build 3612119,187,641 - 119,188,141 (-)MPROMDB
RGD ID:7225589
Promoter ID:EPDNEW_H18540
Type:initiation region
Name:PXN_2
Description:paxillin
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H18541  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,250,122 - 120,250,182EPDNEW
RGD ID:7225591
Promoter ID:EPDNEW_H18541
Type:initiation region
Name:PXN_1
Description:paxillin
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H18540  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812120,265,730 - 120,265,790EPDNEW

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 12q24.23-24.33(chr12:118165459-133182322)x3 copy number gain See cases [RCV000050866] Chr12:118165459..133182322 [GRCh38]
Chr12:118603264..133758908 [GRCh37]
Chr12:117087647..132268981 [NCBI36]
Chr12:12q24.23-24.33
pathogenic
GRCh38/hg38 12q24.23-24.31(chr12:119286893-122638552)x3 copy number gain See cases [RCV000051981] Chr12:119286893..122638552 [GRCh38]
Chr12:119724698..123123099 [GRCh37]
Chr12:118209081..121689052 [NCBI36]
Chr12:12q24.23-24.31
uncertain significance
GRCh38/hg38 12q24.21-24.33(chr12:115131583-133166920)x3 copy number gain See cases [RCV000053689] Chr12:115131583..133166920 [GRCh38]
Chr12:115569388..133743506 [GRCh37]
Chr12:114053771..132253579 [NCBI36]
Chr12:12q24.21-24.33
pathogenic
GRCh38/hg38 12q24.23-24.33(chr12:119417382-133191400)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053691]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053691]|See cases [RCV000053691] Chr12:119417382..133191400 [GRCh38]
Chr12:119855187..133767986 [GRCh37]
Chr12:118339570..132278059 [NCBI36]
Chr12:12q24.23-24.33
pathogenic
GRCh38/hg38 12q24.23(chr12:120251893-120291691)x3 copy number gain See cases [RCV000139843] Chr12:120251893..120291691 [GRCh38]
Chr12:120689696..120729494 [GRCh37]
Chr12:119174079..119213877 [NCBI36]
Chr12:12q24.23
uncertain significance
GRCh38/hg38 12p13.33-q24.33(chr12:121271-133196807)x3 copy number gain See cases [RCV000139555] Chr12:121271..133196807 [GRCh38]
Chr12:282465..133773393 [GRCh37]
Chr12:100698..132283466 [NCBI36]
Chr12:12p13.33-q24.33
pathogenic
GRCh38/hg38 12q24.21-24.33(chr12:114268403-133201316)x3 copy number gain See cases [RCV000143656] Chr12:114268403..133201316 [GRCh38]
Chr12:114706208..133777902 [GRCh37]
Chr12:113190591..132287975 [NCBI36]
Chr12:12q24.21-24.33
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:1-133851895)x3 copy number gain See cases [RCV000258805] Chr12:1..133851895 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic|likely pathogenic
GRCh37/hg19 12q24.23-24.31(chr12:118486842-120995382)x3 copy number gain See cases [RCV000447605] Chr12:118486842..120995382 [GRCh37]
Chr12:12q24.23-24.31
likely pathogenic
GRCh37/hg19 12q24.23-24.31(chr12:120600171-120812991)x3 copy number gain See cases [RCV000448236] Chr12:120600171..120812991 [GRCh37]
Chr12:12q24.23-24.31
uncertain significance
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902)x3 copy number gain See cases [RCV000510482] Chr12:173787..133777902 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902) copy number gain See cases [RCV000511643] Chr12:173787..133777902 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12q24.23-24.31(chr12:120516089-121376736)x3 copy number gain not provided [RCV000683452] Chr12:120516089..121376736 [GRCh37]
Chr12:12q24.23-24.31
uncertain significance
GRCh37/hg19 12q24.23-24.33(chr12:120367241-133777645)x3 copy number gain not provided [RCV000738070] Chr12:120367241..133777645 [GRCh37]
Chr12:12q24.23-24.33
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:191619-133777645)x3 copy number gain not provided [RCV000750246] Chr12:191619..133777645 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:621220-133779118)x3 copy number gain not provided [RCV000750253] Chr12:621220..133779118 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
NM_001385981.1(PXN):c.2574+8G>A single nucleotide variant not provided [RCV000967292] Chr12:120215095 [GRCh38]
Chr12:120652898 [GRCh37]
Chr12:12q24.23
benign
NM_001385981.1(PXN):c.117A>G (p.Thr39=) single nucleotide variant not provided [RCV000967293] Chr12:120224274 [GRCh38]
Chr12:120662077 [GRCh37]
Chr12:12q24.23
benign
NM_001385981.1(PXN):c.494-4C>G single nucleotide variant not provided [RCV000952986] Chr12:120222754 [GRCh38]
Chr12:120660557 [GRCh37]
Chr12:12q24.23
likely benign
NM_001385981.1(PXN):c.2575-10T>G single nucleotide variant not provided [RCV000881707] Chr12:120215008 [GRCh38]
Chr12:120652811 [GRCh37]
Chr12:12q24.23
benign
NM_001385981.1(PXN):c.2991G>A (p.Thr997=) single nucleotide variant not provided [RCV000888161] Chr12:120212569 [GRCh38]
Chr12:120650372 [GRCh37]
Chr12:12q24.23
benign
NM_001385981.1(PXN):c.435C>T (p.Leu145=) single nucleotide variant not provided [RCV000931157] Chr12:120222921 [GRCh38]
Chr12:120660724 [GRCh37]
Chr12:12q24.23
likely benign
NM_001385981.1(PXN):c.2718C>T (p.Arg906=) single nucleotide variant not provided [RCV000957126] Chr12:120214855 [GRCh38]
Chr12:120652658 [GRCh37]
Chr12:12q24.23
benign
GRCh37/hg19 12q24.22-24.33(chr12:117461902-133841395)x3 copy number gain Neurodevelopmental disorder with nonspecific brain abnormalities and with or without seizures [RCV001801213] Chr12:117461902..133841395 [GRCh37]
Chr12:12q24.22-24.33
likely pathogenic
GRCh37/hg19 12q24.23-24.31(chr12:118486842-120995382) copy number gain not specified [RCV002053027] Chr12:118486842..120995382 [GRCh37]
Chr12:12q24.23-24.31
likely pathogenic

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:9718 AgrOrtholog
COSMIC PXN COSMIC
Ensembl Genes ENSG00000089159 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSP00000228307 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000267257 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000391283 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000395536 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000443745 UniProtKB/TrEMBL
  ENSP00000443887 ENTREZGENE, UniProtKB/TrEMBL
  ENSP00000446607 UniProtKB/TrEMBL
  ENSP00000446650 UniProtKB/TrEMBL
  ENSP00000446893 UniProtKB/TrEMBL
  ENSP00000447180 UniProtKB/TrEMBL
  ENSP00000489840 ENTREZGENE, UniProtKB/TrEMBL
  ENSP00000489977 UniProtKB/TrEMBL
  ENSP00000490352 UniProtKB/TrEMBL
  ENSP00000490896 UniProtKB/TrEMBL
Ensembl Transcript ENST00000228307 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000267257 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000323871 UniProtKB/TrEMBL
  ENST00000424649 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000458477 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000536957 ENTREZGENE, UniProtKB/TrEMBL
  ENST00000543331 UniProtKB/TrEMBL
  ENST00000546532 UniProtKB/TrEMBL
  ENST00000547983 UniProtKB/TrEMBL
  ENST00000548912 UniProtKB/TrEMBL
  ENST00000552550 UniProtKB/TrEMBL
  ENST00000637386 UniProtKB/TrEMBL
  ENST00000637617 ENTREZGENE, UniProtKB/TrEMBL
  ENST00000637624 UniProtKB/TrEMBL
GTEx ENSG00000089159 GTEx
HGNC ID HGNC:9718 ENTREZGENE
Human Proteome Map PXN Human Proteome Map
InterPro Paxillin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_LIM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:5829 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 5829 ENTREZGENE
OMIM 602505 OMIM
PANTHER PTHR24216:SF11 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam LIM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA34062 PharmGKB
PROSITE LIM_DOMAIN_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  LIM_DOMAIN_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART LIM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A140VJQ8 ENTREZGENE, UniProtKB/TrEMBL
  A0A1B0GTU4_HUMAN UniProtKB/TrEMBL
  A0A1B0GU60_HUMAN UniProtKB/TrEMBL
  A0A1B0GV30_HUMAN UniProtKB/TrEMBL
  A0A1B0GWE7_HUMAN UniProtKB/TrEMBL
  F5GZ78_HUMAN UniProtKB/TrEMBL
  F5H836_HUMAN UniProtKB/TrEMBL
  F8VZ39_HUMAN UniProtKB/TrEMBL
  F8W0G0_HUMAN UniProtKB/TrEMBL
  F8W0K8_HUMAN UniProtKB/TrEMBL
  F8W1E0_HUMAN UniProtKB/TrEMBL
  P49023 ENTREZGENE, UniProtKB/Swiss-Prot
  Q7Z7K5_HUMAN UniProtKB/TrEMBL
  Q9BTK0_HUMAN UniProtKB/TrEMBL
UniProt Secondary B2RAI3 UniProtKB/Swiss-Prot
  B7ZMB4 UniProtKB/Swiss-Prot
  O14970 UniProtKB/Swiss-Prot
  O14971 UniProtKB/Swiss-Prot
  O60360 UniProtKB/Swiss-Prot
  Q5HYA4 UniProtKB/Swiss-Prot