Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Col6a2 (collagen, type VI, alpha 2) Mus musculus
Analyze
Symbol: Col6a2
Name: collagen, type VI, alpha 2
Description: Predicted to have collagen binding activity. Predicted to be involved in growth plate cartilage chondrocyte morphogenesis. Localizes to the extracellular matrix and sarcolemma. Human ortholog(s) of this gene implicated in Ullrich congenital muscular dystrophy. Is expressed in several structures, including gut; heart; nervous system; reproductive system; and sensory organ. Orthologous to human COL6A2 (collagen type VI alpha 2 chain); PARTICIPATES IN syndecan signaling pathway; cell-extracellular matrix signaling pathway; INTERACTS WITH 17alpha-ethynylestradiol; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Col6a-2; collagen alpha-2(VI) chain; MGC36205; procollagen, type VI, alpha 2
Orthologs:
Homo sapiens (human) : COL6A2 (collagen type VI alpha 2 chain)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Col6a2 (collagen type VI alpha 2 chain)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col6a2 (collagen type VI alpha 2 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL6A2 (collagen type VI alpha 2 chain)
Canis lupus familiaris (dog) : COL6A2 (collagen type VI alpha 2 chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Col6a2 (collagen type VI alpha 2 chain)
Sus scrofa (pig) : COL6A2 (collagen type VI alpha 2 chain)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm381076,595,756 - 76,623,630 (-)NCBIGRCm38GRCm38mm10GRCm38
MGSCv371076,058,501 - 76,086,149 (-)NCBIGRCm37mm9NCBIm37
MGSCv361076,039,478 - 76,067,030 (-)NCBImm8
Celera1077,640,875 - 77,668,353 (-)NCBICelera
Cytogenetic Map10 C1NCBI
cM Map1039.32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Additional Information

External Database Links
 
More on Col6a2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1313702
Created: 2005-01-12
Species: Mus musculus
Last Modified: 2019-10-16
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.